JoGo: Joint Open Genome and Omics Platform

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PFKFB3_chr10_6197932_6240532	6200672	GGGGCGGG others(10): Show GGGGCGGGGGGTGGTGGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0062 a0001c0001t0008g0062	1	432	0.0023	-17	c.-25 others(28): Show c.-2588_-2572delGGGCGGGGGGTGGTGGT	PFKFB3	ENSG00000170525.21	transcript	ENST00000379775.9	protein_coding		2259		chr10	TogoVar
PFKFB4_chr3_48512684_48561803	48529316	AAGTCATA others(10): Show AAGTCATAATGTTGGAAT	A A	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	246	0.0041	-17	c.988 others(34): Show c.988-3664_988-3648delATTCCAACATTATGACT	PFKFB4	ENSG00000114268.12	transcript	ENST00000232375.8	protein_coding	9/13			chr3	TogoVar
PFKL_chr21_44295053_44332373	44300726	GGCTGCCC others(10): Show GGCTGCCCGGGGCATTGA	G G	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00733.hp2 others(126): Show HG00408.hp1 HG00438.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG02004.hp2 HG02040.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp2 HG02132.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp1 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03942.hp2 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp2 NA18941.hp2 NA18945.hp2 NA18955.hp2 NA18962.hp1 NA18969.hp1 NA18973.hp2 NA18975.hp2 NA18983.hp2 NA18984.hp1 NA18986.hp2 NA18989.hp2 NA18992.hp2 NA18998.hp2 NA18999.hp1 NA19003.hp1 NA19005.hp2 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp2 NA19074.hp2 NA19077.hp1 NA19085.hp2 NA19087.hp2 NA19240.hp1 NA19240.hp2 NA20805.hp2 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0004 a0001c0007 others(4): Show a0001c0001 a0001c0004 a0001c0007 a0001c0008 a0001c0010 a0002c0003 a0004c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0004t0002 a0001c0007t0002 a0001c0008t0002 a0001c0010t0001 a0002c0003t0001 a0002c0003t0002 a0002c0003t0005 a0004c0011t0002	a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0065 others(104): Show a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0065 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0087 a0001c0001t0001g0107 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0015 a0001c0001t0002g0022 a0001c0001t0002g0031 a0001c0001t0002g0047 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0059 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0122 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0305 a0001c0001t0002g0306 a0001c0001t0004g0023 a0001c0001t0004g0048 a0001c0001t0004g0053 a0001c0001t0004g0115 a0001c0001t0005g0117 a0001c0001t0005g0118 a0001c0001t0005g0121 a0001c0001t0006g0024 a0001c0001t0006g0070 a0001c0001t0006g0071 a0001c0001t0006g0072 a0001c0001t0006g0073 a0001c0001t0009g0077 a0001c0004t0002g0066 a0001c0007t0002g0058 a0001c0008t0002g0057 a0001c0010t0001g0113 a0002c0003t0001g0006 a0002c0003t0001g0021 a0002c0003t0001g0049 a0002c0003t0001g0061 a0002c0003t0001g0062 a0002c0003t0001g0067 a0002c0003t0001g0292 a0002c0003t0001g0293 a0002c0003t0001g0294 a0002c0003t0001g0295 a0002c0003t0001g0296 a0002c0003t0001g0297 a0002c0003t0001g0298 a0002c0003t0001g0299 a0002c0003t0001g0300 a0002c0003t0002g0060 a0002c0003t0005g0063 a0002c0003t0005g0064 a0004c0011t0002g0031	129	392	0.3291	-17	c.85+ others(30): Show c.85+539_85+555delTGCCCGGGGCATTGAGC	PFKL	ENSG00000141959.17	transcript	ENST00000349048.9	protein_coding	1/21		INFO_REALIGN_3_PRIME	chr21	TogoVar
PFKL_chr21_44295053_44332373	44304732	CGGGGGGC others(10): Show CGGGGGGCTCGGCTGTCT	C C	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp2 HG01496.hp1 others(20): Show HG01257.hp2 HG01258.hp2 HG01496.hp1 HG02280.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp2 HG02809.hp2 HG02922.hp2 HG02965.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG06807.hp2 NA19043.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0008 a0001c0001 a0001c0007 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0007t0002 a0001c0008t0002	a0001c0001t0001g0065 a0001c0001t0001g0116 a0001c0001t0001g0119 others(18): Show a0001c0001t0001g0065 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0068 a0001c0001t0002g0111 a0001c0001t0002g0305 a0001c0001t0004g0023 a0001c0001t0005g0117 a0001c0001t0005g0118 a0001c0001t0005g0121 a0001c0001t0006g0024 a0001c0001t0006g0070 a0001c0001t0006g0071 a0001c0001t0006g0072 a0001c0001t0006g0073 a0001c0007t0002g0058 a0001c0008t0002g0057	23	392	0.0587	-17	c.86- others(32): Show c.86-1931_86-1915delGGGGGGCTCGGCTGTCT	PFKL	ENSG00000141959.17	transcript	ENST00000349048.9	protein_coding	1/21		INFO_REALIGN_3_PRIME	chr21	TogoVar
PFKM_chr12_48114364_48151404	48129210	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02723.hp2 HG02886.hp2 others(3): Show HG02622.hp2 HG02723.hp2 HG02886.hp2 HG03579.hp1 NA19077.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0208 a0001c0001t0001g0209 others(2): Show a0001c0001t0001g0053 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211	6	412	0.0146	-17	c.86- others(32): Show c.86-1136_86-1120delTTTTTTTTTTTTTTTTT	PFKM	ENSG00000152556.17	transcript	ENST00000359794.11	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr12	TogoVar
PFKP_chr10_3062548_3141802	3106872	ACCCCTGC others(10): Show ACCCCTGCCCCCTCCTCG	A A	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0096 a0001c0009t0001g0096	1	402	0.0025	-17	c.775 others(32): Show c.775-331_775-315delCTCCTCGCCCCTGCCCC	PFKP	ENSG00000067057.19	transcript	ENST00000381125.9	protein_coding	7/21		INFO_REALIGN_3_PRIME	chr10	TogoVar
PFKP_chr10_3062548_3141802	3121814	TTTTTTTT others(10): Show TTTTTTTTTTTTTTTTTC	T T	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0007 a0001c0003t0007	a0001c0003t0007g0149 a0001c0003t0007g0149	1	402	0.0025	-17	c.168 others(36): Show c.1683+1778_1683+1794delTTTTTTTTTCTTTTTTT	PFKP	ENSG00000067057.19	transcript	ENST00000381125.9	protein_coding	16/21		INFO_REALIGN_3_PRIME	chr10	TogoVar
PGAM5_chr12_132705842_132727734	132718461	TGGGGTGC others(10): Show TGGGGTGCGTGCTGGGTG	T T	intron_variant intron_variant	MODIFIER	HG03669.hp1 NA20905.hp2 HG03669.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0078 a0001c0001t0016g0120 a0001c0001t0016g0078 a0001c0001t0016g0120	2	394	0.0051	-17	c.719 others(32): Show c.719+348_719+364delCGTGCTGGGTGGGGGTG	PGAM5	ENSG00000247077.8	transcript	ENST00000498926.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr12	TogoVar
PGBD5_chr1_230309490_230431332	230396030	CTTGCTTC others(10): Show CTTGCTTCCGTCTTCCCT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0159 a0001c0001t0012g0159	1	288	0.0035	-17	c.331 others(36): Show c.331+29551_331+29567delAGGGAAGACGGAAGCAA	PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	1/6			chr1	TogoVar
PGD_chr1_10394064_10425511	10412812	GTGAGGAG others(10): Show GTGAGGAGCCCTTGCCTC	G G	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01258.hp1 HG02004.hp1 others(1): Show HG01256.hp1 HG01258.hp1 HG02004.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0009 a0001c0001t0005 a0001c0001t0009	a0001c0001t0005g0033 a0001c0001t0005g0034 a0001c0001t0009g0033 a0001c0001t0005g0033 a0001c0001t0005g0034 a0001c0001t0009g0033	4	394	0.0102	-17	c.655 others(32): Show c.655-242_655-226delCCCTTGCCTCTGAGGAG	PGD	ENSG00000142657.21	transcript	ENST00000270776.13	protein_coding	7/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
PGGT1B_chr5_115199012_115267877	115232989	CAAAAAAA others(10): Show CAAAAAAAGCCACCCAGT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(110): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00558.hp1 HG00609.hp2 HG00621.hp2 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00735.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01192.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01361.hp1 HG01433.hp1 HG01516.hp2 HG01884.hp2 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG01993.hp2 HG02015.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02145.hp2 HG02148.hp2 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp2 HG02647.hp1 HG02647.hp2 HG02738.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03017.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03471.hp2 HG03516.hp2 HG03579.hp2 HG03688.hp1 HG03710.hp1 HG04184.hp2 HG04199.hp2 HG06807.hp2 NA18747.hp1 NA18940.hp1 NA18941.hp2 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp2 NA18949.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18982.hp2 NA18986.hp1 NA18990.hp1 NA18992.hp1 NA18993.hp1 NA18998.hp2 NA19000.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19058.hp2 NA19060.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19076.hp1 NA19078.hp2 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp2 NA19240.hp1 NA20300.hp1 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 others(52): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0044 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0075 a0001c0001t0076 a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 a0001c0001t0080 a0001c0001t0081 a0001c0001t0082 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0087 a0001c0001t0088 a0001c0001t0098 a0001c0001t0103 a0001c0001t0104 a0001c0001t0105 a0001c0001t0107 a0001c0001t0108 a0001c0001t0109 a0001c0001t0110 a0001c0002t0004 a0001c0002t0005 a0001c0002t0012 a0001c0002t0015 a0001c0002t0019 a0001c0002t0070	a0001c0001t0004g0068 a0001c0001t0004g0088 a0001c0001t0004g0136 others(106): Show a0001c0001t0004g0068 a0001c0001t0004g0088 a0001c0001t0004g0136 a0001c0001t0005g0009 a0001c0001t0005g0089 a0001c0001t0005g0091 a0001c0001t0005g0093 a0001c0001t0005g0137 a0001c0001t0005g0300 a0001c0001t0005g0301 a0001c0001t0005g0302 a0001c0001t0005g0303 a0001c0001t0007g0064 a0001c0001t0007g0066 a0001c0001t0007g0104 a0001c0001t0007g0108 a0001c0001t0007g0123 a0001c0001t0007g0125 a0001c0001t0007g0220 a0001c0001t0007g0221 a0001c0001t0007g0224 a0001c0001t0010g0071 a0001c0001t0010g0078 a0001c0001t0010g0082 a0001c0001t0010g0086 a0001c0001t0010g0107 a0001c0001t0010g0112 a0001c0001t0010g0200 a0001c0001t0010g0225 a0001c0001t0011g0067 a0001c0001t0011g0080 a0001c0001t0011g0083 a0001c0001t0011g0102 a0001c0001t0011g0204 a0001c0001t0012g0222 a0001c0001t0012g0223 a0001c0001t0012g0226 a0001c0001t0012g0229 a0001c0001t0014g0076 a0001c0001t0014g0095 a0001c0001t0014g0096 a0001c0001t0014g0203 a0001c0001t0015g0079 a0001c0001t0015g0097 a0001c0001t0017g0070 a0001c0001t0017g0186 a0001c0001t0017g0214 a0001c0001t0019g0081 a0001c0001t0019g0106 a0001c0001t0020g0087 a0001c0001t0020g0101 a0001c0001t0020g0105 a0001c0001t0021g0053 a0001c0001t0021g0054 a0001c0001t0021g0056 a0001c0001t0022g0007 a0001c0001t0022g0099 a0001c0001t0023g0075 a0001c0001t0023g0098 a0001c0001t0023g0103 a0001c0001t0037g0094 a0001c0001t0037g0205 a0001c0001t0038g0216 a0001c0001t0038g0219 a0001c0001t0039g0069 a0001c0001t0039g0199 a0001c0001t0040g0008 a0001c0001t0044g0085 a0001c0001t0044g0124 a0001c0001t0060g0109 a0001c0001t0061g0228 a0001c0001t0062g0294 a0001c0001t0063g0217 a0001c0001t0071g0110 a0001c0001t0072g0111 a0001c0001t0073g0055 a0001c0001t0074g0263 a0001c0001t0075g0072 a0001c0001t0076g0073 a0001c0001t0077g0134 a0001c0001t0078g0215 a0001c0001t0079g0113 a0001c0001t0080g0100 a0001c0001t0081g0065 a0001c0001t0082g0227 a0001c0001t0083g0092 a0001c0001t0084g0062 a0001c0001t0085g0218 a0001c0001t0086g0077 a0001c0001t0087g0201 a0001c0001t0088g0187 a0001c0001t0098g0206 a0001c0001t0103g0191 a0001c0001t0104g0190 a0001c0001t0105g0188 a0001c0001t0107g0197 a0001c0001t0108g0084 a0001c0001t0109g0198 a0001c0001t0110g0074 a0001c0002t0004g0014 a0001c0002t0004g0063 a0001c0002t0004g0128 a0001c0002t0004g0209 a0001c0002t0005g0090 a0001c0002t0012g0129 a0001c0002t0015g0132 a0001c0002t0015g0133 a0001c0002t0019g0127 a0001c0002t0070g0061	113	372	0.3038	-17	c.613 others(34): Show c.613-1985_613-1969delACTGGGTGGCTTTTTTT	PGGT1B	ENSG00000164219.10	transcript	ENST00000419445.6	protein_coding	5/8			chr5	TogoVar
PGLYRP2_chr19_15463645_15484501	15467837	TTTTCCTT others(10): Show TTTTCCTTCCTTCCTTCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18948.hp1 NA18960.hp1 NA18948.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0308 a0001c0001t0001g0024 a0001c0001t0001g0308	2	382	0.0052	-17	c.80 others(26): Show c.809_*825delGGAAGGAAGGAAGGAAA	PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding		807		chr19	TogoVar
PGLYRP2_chr19_15463645_15484501	15479256	TACGCCTT others(10): Show TACGCCTTCTGCAGAGCC	T T	intron_variant intron_variant	MODIFIER	HG01517.hp1 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	382	0.0026	-17	c.61+ others(28): Show c.61+38_61+54delGGCTCTGCAGAAGGCGT	PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding	1/4			chr19	TogoVar
PGLYRP2_chr19_15463645_15484501	15482607	CCTTCCTT others(10): Show CCTTCCTTCTTTCTTTCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	382	0.0026	-17	c.-32 others(28): Show c.-3253_-3237delAGAAAGAAAGAAGGAAG	PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding		3107		chr19	TogoVar
PGPEP1L_chr15_98963229_99012792	98979630	ATTCTTTT others(10): Show ATTCTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG03041.hp1 NA18948.hp2 HG00639.hp1 HG03041.hp1 NA18948.hp2	a0000 a0000	a0000c0002 a0000c0002	a0000c0002t0001 a0000c0002t0016 a0000c0002t0001 a0000c0002t0016	a0000c0002t0001g0194 a0000c0002t0001g0204 a0000c0002t0016g0011 a0000c0002t0001g0194 a0000c0002t0001g0204 a0000c0002t0016g0011	3	398	0.0075	-17	c.-14 others(36): Show c.-141-8489_-141-8473delAAAAAAAAAAAAAAGAA	PGPEP1L	ENSG00000183571.11	transcript	ENST00000535714.2	protein_coding	2/4			chr15	TogoVar
PGP_chr16_2206593_2219840	2214777	TCGCCGCC others(10): Show TCGCCGCCCGCCGGCCGC	T T	start_retained_variant start_retained_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0023 a0001c0001t0036g0023	1	452	0.0022	-17	c.-17 others(23): Show c.-17_-1delGCGGCCGGCGGGCGGCG	PGP	ENSG00000184207.9	transcript	ENST00000333503.8	protein_coding	1/2			chr16	TogoVar
PGR_chr11_101024624_101134813	101046292	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG02717.hp2 HG02895.hp2 others(1): Show HG00733.hp1 HG02717.hp2 HG02895.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0022 a0001c0002t0026 a0001c0002t0022 a0001c0002t0026	a0001c0002t0022g0043 a0001c0002t0022g0055 a0001c0002t0026g0042 others(1): Show a0001c0002t0022g0043 a0001c0002t0022g0055 a0001c0002t0026g0042 a0001c0002t0026g0044	4	254	0.0158	-17	c.248 others(36): Show c.2488+3620_2488+3636delAAAAAAAAAAAAAAAAA	PGR	ENSG00000082175.16	transcript	ENST00000325455.10	protein_coding	6/7			chr11	TogoVar
PGR_chr11_101024624_101134813	101064331	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02258.hp1 HG02896.hp2 others(2): Show HG01243.hp2 HG02258.hp1 HG02896.hp2 HG02897.hp2 HG03225.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0011 a0004c0006t0041 a0004c0006t0011 a0004c0006t0041	a0004c0006t0011g0012 a0004c0006t0011g0014 a0004c0006t0011g0015 others(2): Show a0004c0006t0011g0012 a0004c0006t0011g0014 a0004c0006t0011g0015 a0004c0006t0011g0016 a0004c0006t0041g0013	5	254	0.0197	-17	c.190 others(36): Show c.1907-1596_1907-1580delTTTTTTTTTTTTTTTTT	PGR	ENSG00000082175.16	transcript	ENST00000325455.10	protein_coding	3/7			chr11	TogoVar
PGS1_chr17_78373649_78429659	78377686	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0056 a0001c0002t0001g0056	1	398	0.0025	-17	c.-97 others(26): Show c.-979_-963delTTTTTTTTTTTTTTTTT	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding		962		chr17	TogoVar
PGS1_chr17_78373649_78429659	78410462	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0343 a0001c0001t0001g0343	1	398	0.0025	-17	c.140 others(36): Show c.1403-4404_1403-4388delTTTTTTTTTTTTTTTTT	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78416536	CCACTGCC others(10): Show CCACTGCCCTAGTAAGGG	C C	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02895.hp1 HG03225.hp2 others(1): Show HG02630.hp2 HG02895.hp1 HG03225.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0349 others(1): Show a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0349 a0001c0001t0001g0362	4	398	0.0101	-17	c.155 others(36): Show c.1551+1515_1551+1531delCCCTAGTAAGGGCACTG	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78422790	CTTTGAAG others(10): Show CTTTGAAGCCTGAGAAAT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01952.hp1 HG01109.hp1 HG01952.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0015 a0001c0002t0007g0110 a0001c0002t0007g0015 a0001c0002t0007g0110	2	398	0.0050	-17	c.11 others(34): Show c.11-1270_*11-1254delTTTGAAGCCTGAGAAAT	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	9/9			chr17	TogoVar
PHACTR1_chr6_12711767_13292837	13191730	GGAGGGAC others(10): Show GGAGGGACAGTCTCCCCA	G G	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0054 a0001c0003t0001g0054	1	108	0.0093	-17	c.664 others(34): Show c.664+9046_664+9062delAGGGACAGTCTCCCCAG	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13267838	GAAAAAAA others(10): Show GAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01167.hp1 HG01167.hp2 others(47): Show HG00735.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp2 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01993.hp1 HG01993.hp2 HG02027.hp2 HG02055.hp2 HG02109.hp2 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp1 HG02572.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02886.hp1 HG02896.hp1 HG02922.hp1 HG02965.hp2 HG03098.hp2 HG03195.hp1 HG03492.hp1 HG03492.hp2 HG03831.hp1 HG06807.hp1 NA18906.hp2 NA18946.hp1 NA18946.hp2 NA18955.hp1 NA18955.hp2 NA18983.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0002t0003 a0001c0002t0004	a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0018 others(47): Show a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0018 a0001c0001t0001g0032 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0009 a0001c0001t0002g0015 a0001c0001t0002g0019 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0040 a0001c0001t0002g0043 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0081 a0001c0001t0002g0089 a0001c0001t0002g0091 a0001c0001t0002g0093 a0001c0001t0002g0102 a0001c0001t0003g0023 a0001c0001t0003g0042 a0001c0001t0003g0044 a0001c0001t0003g0066 a0001c0001t0003g0068 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0080 a0001c0001t0003g0086 a0001c0001t0003g0092 a0001c0001t0003g0096 a0001c0001t0003g0099 a0001c0001t0003g0104 a0001c0001t0006g0053 a0001c0001t0008g0106 a0001c0002t0003g0095 a0001c0002t0004g0108	50	108	0.4630	-17	c.139 others(36): Show c.1392-5004_1392-4988delAAAAAAAAAAAAAAAAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	10/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13288116	CTCTTTTT others(10): Show CTCTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0044 a0001c0001t0003g0044	1	108	0.0093	-17	c.10 others(28): Show c.1039_*1055delTCTTTTTTTTTTTTTTT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding		280		chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143736554	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0127 a0001c0001t0127	a0001c0001t0127g0018 a0001c0001t0127g0018	1	310	0.0032	-17	c.215 others(36): Show c.215-12409_215-12393delTTTTTTTTTTTTTTTTT	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR3_chr20_59599540_59852711	59847037	ATTTGTAT others(10): Show ATTTGTATAAGGTTTTTG	A A	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0093	1	250	0.0040	-17	c.166 others(32): Show c.1665-77_1665-61delTTTGTATAAGGTTTTTG	PHACTR3	ENSG00000087495.17	transcript	ENST00000371015.6	protein_coding	12/12			chr20	TogoVar
PHAX_chr5_126595947_126632252	126611299	CGGCCTCG others(10): Show CGGCCTCGGCCTCCCAAA	C C	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0238 a0001c0001t0005g0238	1	382	0.0026	-17	c.831 others(34): Show c.831+2817_831+2833delGCCTCGGCCTCCCAAAG	PHAX	ENSG00000164902.14	transcript	ENST00000297540.5	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
PHEX_chrX_22027325_22256310	22055174	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 NA19009.hp1 HG02615.hp2 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0050 a0001c0001t0005 a0001c0001t0050	a0001c0001t0005g0139 a0001c0001t0050g0128 a0001c0001t0005g0139 a0001c0001t0050g0128	2	231	0.0087	-17	c.349 others(34): Show c.349+7988_349+8004delAAAAAAAAAAAAAAAAA	PHEX	ENSG00000102174.10	transcript	ENST00000379374.5	protein_coding	3/21		INFO_REALIGN_3_PRIME	chrX	TogoVar
PHEX_chrX_22027325_22256310	22176393	AAAAAAAA others(10): Show AAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0124 a0001c0001t0124	a0001c0001t0124g0121 a0001c0001t0124g0121	1	231	0.0043	-17	c.148 others(36): Show c.1483-1878_1483-1862delAAAAAAAAATATATATA	PHEX	ENSG00000102174.10	transcript	ENST00000379374.5	protein_coding	13/21		INFO_REALIGN_3_PRIME	chrX	TogoVar
PHEX_chrX_22027325_22256310	22176397	AAAAAAAT others(10): Show AAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03195.hp2 HG03516.hp2 HG02965.hp1 HG03195.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0098 a0001c0001t0099 a0001c0001t0047 a0001c0001t0098 a0001c0001t0099	a0001c0001t0047g0170 a0001c0001t0098g0172 a0001c0001t0099g0070 a0001c0001t0047g0170 a0001c0001t0098g0172 a0001c0001t0099g0070	3	231	0.0130	-17	c.148 others(36): Show c.1483-1874_1483-1858delAAAAATATATATATATA	PHEX	ENSG00000102174.10	transcript	ENST00000379374.5	protein_coding	13/21		INFO_REALIGN_3_PRIME	chrX	TogoVar
PHEX_chrX_22027325_22256310	22176399	AAAAATAT others(10): Show AAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0157 a0001c0004t0157	a0001c0004t0157g0008 a0001c0004t0157g0008	1	231	0.0043	-17	c.148 others(36): Show c.1483-1872_1483-1856delAAATATATATATATATA	PHEX	ENSG00000102174.10	transcript	ENST00000379374.5	protein_coding	13/21		INFO_REALIGN_3_PRIME	chrX	TogoVar
PHF10_chr6_169698902_169729500	169724436	CCCTCAGC others(10): Show CCCTCAGCCCCGCGGCCG	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0214 a0001c0001t0017g0214	1	394	0.0025	-17	c.-52 others(26): Show c.-522_-506delCGGCCGCGGGGCTGAGG	PHF10	ENSG00000130024.15	transcript	ENST00000339209.9	protein_coding	1/12	506		chr6	TogoVar
PHF14_chr7_10968872_11174618	11162072	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19064.hp1 NA19064.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0101 a0001c0002t0001g0101	1	298	0.0034	-17	c.277 others(36): Show c.2773-7326_2773-7310delTTTTTTTTTTTTTTTTT	PHF14	ENSG00000106443.17	transcript	ENST00000634607.2	protein_coding	17/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PHF20_chr20_35767015_35955370	35885467	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01515.hp2 HG01517.hp1 others(18): Show HG01074.hp1 HG01515.hp2 HG01517.hp1 HG02080.hp2 HG02698.hp2 HG03490.hp2 HG03491.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp2 HG04199.hp2 HG04228.hp1 NA18747.hp1 NA18943.hp1 NA18952.hp2 NA18966.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 others(18): Show a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0185 a0001c0001t0002g0202 a0001c0001t0004g0111	21	206	0.1019	-17	c.128 others(38): Show c.1282+13655_1282+13671delTTTTTTTTTTTTTTTTT	PHF20	ENSG00000025293.17	transcript	ENST00000374012.8	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
PHF21A_chr11_45924319_46126454	46079834	AAGGAAAG others(10): Show AAGGAAAGGAAAGGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03041.hp2 HG02970.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0096 a0001c0001t0018g0097 a0001c0001t0018g0096 a0001c0001t0018g0097	2	280	0.0071	-17	c.55- others(30): Show c.55-685_55-669delCTTTCCTTTCCTTTCCT	PHF21A	ENSG00000135365.17	transcript	ENST00000676320.1	protein_coding	4/18			chr11	TogoVar
PHF21B_chr22_44876162_45015005	45007539	CGGCGCGG others(10): Show CGGCGCGGGCGGGGGCGG	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0163 a0001c0001t0002g0163	1	300	0.0033	-17	c.120 others(33): Show c.120+989_120+1005delCCGCCCCCGCCCGCGCC	PHF21B	ENSG00000056487.17	transcript	ENST00000313237.10	protein_coding	2/12			chr22	TogoVar
PHF5A_chr22_41454717_41473692	41470528	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0109 a0001c0001t0012g0109	1	408	0.0025	-17	c.-18 others(28): Show c.-1892_-1876delAAAAAAAAAAAAAAAAA	PHF5A	ENSG00000100410.8	transcript	ENST00000216252.4	protein_coding		1837		chr22	TogoVar
PHF8_chrX_53931680_54049473	54009844	GAAAAAAA others(10): Show GAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0171 a0001c0001t0003g0171	1	186	0.0054	-17	c.946 others(34): Show c.946+1261_946+1277delTTTTTTTTTTTTTTTTT	PHF8	ENSG00000172943.21	transcript	ENST00000338154.11	protein_coding	8/21			chrX	TogoVar
PHIP_chr6_78929419_79083254	79061912	CCATGAAT others(10): Show CCATGAATGATATGTTTT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp1 NA19030.hp2 HG02723.hp1 NA19030.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0049 a0001c0005t0054 a0001c0005t0049 a0001c0005t0054	a0001c0005t0049g0036 a0001c0005t0054g0038 a0001c0005t0049g0036 a0001c0005t0054g0038	2	318	0.0063	-17	c.190 others(34): Show c.190-1111_190-1095delAAAACATATCATTCATG	PHIP	ENSG00000146247.15	transcript	ENST00000275034.5	protein_coding	4/39			chr6	TogoVar
PHKB_chr16_47456331_47706523	47461746	GGAATGTG others(10): Show GGAATGTGTCTTCCCTGT	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0095 a0001c0001t0002g0095	1	98	0.0102	-17	c.76+ others(30): Show c.76+332_76+348delCCCTGTGAATGTGTCTT	PHKB	ENSG00000102893.18	transcript	ENST00000323584.10	protein_coding	1/30		INFO_REALIGN_3_PRIME	chr16	TogoVar
PHLPP1_chr18_62710541_62985433	62971658	GGAAGCAG others(10): Show GGAAGCAGGCTCTCTCCA	G G	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01167.hp1 HG01169.hp1 others(2): Show HG01074.hp2 HG01167.hp1 HG01169.hp1 HG02735.hp1 NA20805.hp2	a0003 a0012 a0003 a0012	a0003c0004 a0012c0023 a0003c0004 a0012c0023	a0003c0004t0008 a0003c0004t0017 a0003c0004t0018 others(1): Show a0003c0004t0008 a0003c0004t0017 a0003c0004t0018 a0012c0023t0008	a0003c0004t0008g0058 a0003c0004t0008g0059 a0003c0004t0017g0057 others(2): Show a0003c0004t0008g0058 a0003c0004t0008g0059 a0003c0004t0017g0057 a0003c0004t0018g0061 a0012c0023t0008g0056	5	192	0.0260	-17	c.356 others(34): Show c.3561-854_3561-838delAAGCAGGCTCTCTCCAG	PHLPP1	ENSG00000081913.14	transcript	ENST00000262719.10	protein_coding	14/16		INFO_REALIGN_3_PRIME	chr18	TogoVar
PHLPP2_chr16_71639924_71729701	71701139	GACCATCC others(10): Show GACCATCCCTCCAGCTAA	G G	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01981.hp2 HG01993.hp1 others(4): Show HG01255.hp2 HG01981.hp2 HG01993.hp1 HG02148.hp2 HG02293.hp2 HG02300.hp2 HG03239.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0019 a0003c0004t0002 a0003c0004t0019	a0003c0004t0002g0211 a0003c0004t0002g0214 a0003c0004t0002g0222 others(4): Show a0003c0004t0002g0211 a0003c0004t0002g0214 a0003c0004t0002g0222 a0003c0004t0002g0223 a0003c0004t0002g0224 a0003c0004t0002g0229 a0003c0004t0019g0225	7	324	0.0216	-17	c.418 others(34): Show c.418+1442_418+1458delTTAGCTGGAGGGATGGT	PHLPP2	ENSG00000040199.18	transcript	ENST00000568954.5	protein_coding	3/18			chr16	TogoVar
PHOX2B_chr4_41739082_41753725	41751804	TGGGCGCC others(10): Show TGGGCGCCCCCTGCTGCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp1 HG03225.hp1 HG06807.hp2 others(1): Show HG02717.hp1 HG03225.hp1 HG06807.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0004 a0001c0013t0021 a0001c0001t0004 a0001c0013t0021	a0001c0001t0004g0013 a0001c0013t0021g0043 a0001c0001t0004g0013 a0001c0013t0021g0043	4	382	0.0105	-17	c.-32 others(28): Show c.-3211_-3195delGGCAGCAGGGGGCGCCC	PHOX2B	ENSG00000109132.7	transcript	ENST00000226382.4	protein_coding		3080		chr4	TogoVar
PHYH_chr10_13272799_13305064	13303125	TGAGACGG others(10): Show TGAGACGGAGTCTGACTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	438	0.0023	-17	c.-31 others(28): Show c.-3100_-3084delGAGTCAGACTCCGTCTC	PHYH	ENSG00000107537.14	transcript	ENST00000263038.9	protein_coding		3062		chr10	TogoVar
PI4K2B_chr4_25229033_25284204	25245850	TGTCTCAC others(10): Show TGTCTCACTGCTTGGCGA	T T	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0018 a0001c0012t0018	a0001c0012t0018g0253 a0001c0012t0018g0253	1	436	0.0023	-17	c.269 others(34): Show c.269-6455_269-6439delGAGTCTCACTGCTTGGC	PI4K2B	ENSG00000038210.14	transcript	ENST00000264864.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr4	TogoVar
PI4KA_chr22_20702691_20863811	20817734	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG04204.hp2 HG01257.hp1 HG04204.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0067 a0001c0011t0001g0087 a0001c0011t0001g0067 a0001c0011t0001g0087	2	334	0.0060	-17	c.856 others(32): Show c.856+732_856+748delTTTTTTTTTTTTTTTTT	PI4KA	ENSG00000241973.11	transcript	ENST00000255882.11	protein_coding	7/54			chr22	TogoVar
PI4KA_chr22_20702691_20863811	20824762	ACACACAC others(10): Show ACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0029 a0001c0029	a0001c0029t0001 a0001c0029t0001	a0001c0029t0001g0159 a0001c0029t0001g0159	1	334	0.0030	-17	c.368 others(32): Show c.368-365_368-349delGTGTGTGTGTGTGTGTG	PI4KA	ENSG00000241973.11	transcript	ENST00000255882.11	protein_coding	3/54			chr22	TogoVar
PI4KA_chr22_20702691_20863811	20831597	AAAAACAA others(10): Show AAAAACAAAAACAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02015.hp2 HG02055.hp1 others(8): Show HG01496.hp2 HG02015.hp2 HG02055.hp1 HG02486.hp1 HG03471.hp2 HG03491.hp2 HG03492.hp2 NA18747.hp1 NA18973.hp1 NA18986.hp1 NA19057.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0009 a0001c0001 a0001c0006 a0002c0009	a0001c0001t0001 a0001c0006t0001 a0002c0009t0001 a0001c0001t0001 a0001c0006t0001 a0002c0009t0001	a0001c0001t0001g0247 a0001c0006t0001g0001 a0001c0006t0001g0277 others(7): Show a0001c0001t0001g0247 a0001c0006t0001g0001 a0001c0006t0001g0277 a0001c0006t0001g0278 a0001c0006t0001g0279 a0001c0006t0001g0280 a0001c0006t0001g0281 a0001c0006t0001g0282 a0001c0006t0001g0283 a0002c0009t0001g0019	11	334	0.0329	-17	c.367 others(34): Show c.367+2948_367+2964delGTTTTTGTTTTTGTTTT	PI4KA	ENSG00000241973.11	transcript	ENST00000255882.11	protein_coding	3/54			chr22	TogoVar
PIAS2_chr18_46798218_46922507	46803044	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00438.hp2 HG01071.hp1 others(26): Show HG00280.hp2 HG00438.hp2 HG01071.hp1 HG01099.hp2 HG01106.hp2 HG01169.hp1 HG01256.hp1 HG01346.hp1 HG01358.hp1 HG01516.hp1 HG01517.hp2 HG01928.hp2 HG01943.hp1 HG02630.hp1 HG02698.hp2 HG02970.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03540.hp2 HG03704.hp2 HG03927.hp2 HG04204.hp1 NA18989.hp1 NA19000.hp2 NA19030.hp2 NA19066.hp2 NA20752.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0025 a0001c0001t0029 others(25): Show a0001c0001t0010 a0001c0001t0025 a0001c0001t0029 a0001c0001t0044 a0001c0001t0048 a0001c0001t0063 a0001c0001t0085 a0001c0001t0160 a0001c0001t0163 a0001c0001t0165 a0001c0001t0172 a0001c0001t0174 a0001c0001t0176 a0001c0001t0177 a0001c0001t0178 a0001c0001t0180 a0001c0001t0183 a0001c0001t0185 a0001c0001t0187 a0001c0001t0197 a0001c0001t0206 a0001c0001t0207 a0001c0001t0211 a0001c0001t0214 a0001c0001t0215 a0001c0001t0225 a0001c0001t0228 a0001c0001t0250	a0001c0001t0010g0067 a0001c0001t0025g0005 a0001c0001t0025g0060 others(26): Show a0001c0001t0010g0067 a0001c0001t0025g0005 a0001c0001t0025g0060 a0001c0001t0029g0315 a0001c0001t0044g0057 a0001c0001t0048g0165 a0001c0001t0063g0092 a0001c0001t0085g0063 a0001c0001t0160g0108 a0001c0001t0163g0035 a0001c0001t0165g0051 a0001c0001t0172g0102 a0001c0001t0174g0006 a0001c0001t0176g0064 a0001c0001t0177g0039 a0001c0001t0178g0055 a0001c0001t0180g0007 a0001c0001t0183g0086 a0001c0001t0185g0059 a0001c0001t0187g0052 a0001c0001t0197g0048 a0001c0001t0206g0090 a0001c0001t0207g0062 a0001c0001t0211g0097 a0001c0001t0214g0033 a0001c0001t0215g0032 a0001c0001t0225g0104 a0001c0001t0228g0046 a0001c0001t0250g0226	29	322	0.0901	-17	c.93 others(28): Show c.9372_*9388delTTTTTTTTTTTTTTTTT	PIAS2	ENSG00000078043.16	transcript	ENST00000585916.6	protein_coding		173		chr18	TogoVar

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