Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLC7A2_chr8_17492088_17575566	17562180	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00621.hp2 HG00639.hp2 others(78): Show HG00609.hp1 HG00621.hp2 HG00639.hp2 HG00673.hp1 HG00735.hp2 HG01070.hp2 HG01074.hp2 HG01081.hp2 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01261.hp2 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG02040.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02132.hp2 HG02135.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02559.hp1 HG02572.hp2 HG02615.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02723.hp2 HG02738.hp2 HG02818.hp1 HG02896.hp2 HG02965.hp1 HG03041.hp1 HG03225.hp1 HG03239.hp2 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03704.hp1 HG04115.hp2 HG04199.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18947.hp1 NA18955.hp1 NA18965.hp1 NA18965.hp2 NA18967.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18975.hp1 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18991.hp2 NA18993.hp2 NA18994.hp2 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA19001.hp2 NA19003.hp2 NA19030.hp1 NA19070.hp1 NA19074.hp1 NA19079.hp1 NA19090.hp1 NA19240.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0001 a0001c0003 a0001c0004 others(3): Show a0001c0001 a0001c0003 a0001c0004 a0002c0002 a0004c0006 a0007c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0016 a0001c0001t0025 a0001c0001t0036 a0001c0001t0044 a0001c0001t0074 a0001c0001t0077 a0001c0001t0081 a0001c0003t0004 a0001c0003t0007 a0001c0004t0008 a0001c0004t0076 a0002c0002t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0007 a0002c0002t0058 a0004c0006t0005 a0007c0017t0004	a0001c0001t0001g0395 a0001c0001t0002g0150 a0001c0001t0002g0181 others(78): Show a0001c0001t0001g0395 a0001c0001t0002g0150 a0001c0001t0002g0181 a0001c0001t0002g0187 a0001c0001t0002g0326 a0001c0001t0002g0327 a0001c0001t0002g0331 a0001c0001t0002g0335 a0001c0001t0002g0382 a0001c0001t0004g0023 a0001c0001t0004g0030 a0001c0001t0004g0070 a0001c0001t0004g0160 a0001c0001t0004g0169 a0001c0001t0004g0177 a0001c0001t0004g0189 a0001c0001t0004g0219 a0001c0001t0004g0230 a0001c0001t0004g0233 a0001c0001t0004g0243 a0001c0001t0004g0259 a0001c0001t0004g0274 a0001c0001t0004g0276 a0001c0001t0004g0356 a0001c0001t0004g0360 a0001c0001t0004g0378 a0001c0001t0005g0186 a0001c0001t0005g0193 a0001c0001t0005g0223 a0001c0001t0005g0310 a0001c0001t0005g0325 a0001c0001t0007g0159 a0001c0001t0008g0188 a0001c0001t0008g0241 a0001c0001t0008g0247 a0001c0001t0008g0308 a0001c0001t0008g0323 a0001c0001t0008g0436 a0001c0001t0010g0366 a0001c0001t0016g0303 a0001c0001t0016g0304 a0001c0001t0016g0427 a0001c0001t0016g0437 a0001c0001t0025g0318 a0001c0001t0036g0420 a0001c0001t0036g0421 a0001c0001t0044g0352 a0001c0001t0074g0307 a0001c0001t0077g0074 a0001c0001t0081g0058 a0001c0003t0004g0011 a0001c0003t0004g0029 a0001c0003t0004g0240 a0001c0003t0007g0005 a0001c0003t0007g0010 a0001c0003t0007g0012 a0001c0003t0007g0377 a0001c0003t0007g0379 a0001c0004t0008g0054 a0001c0004t0008g0059 a0001c0004t0076g0309 a0002c0002t0001g0171 a0002c0002t0001g0207 a0002c0002t0001g0226 a0002c0002t0001g0291 a0002c0002t0001g0297 a0002c0002t0001g0409 a0002c0002t0002g0020 a0002c0002t0002g0258 a0002c0002t0002g0292 a0002c0002t0002g0446 a0002c0002t0004g0211 a0002c0002t0007g0018 a0002c0002t0007g0115 a0002c0002t0058g0104 a0004c0006t0005g0380 a0004c0006t0005g0388 a0004c0006t0005g0389 a0004c0006t0005g0392 a0004c0006t0005g0412 a0007c0017t0004g0426	81	99	0.8182	-17	c.167 others(33): Show c.1671+89_1671+105delTTTTTTTTTTTTTTTTT	SLC7A2	ENSG00000003989.18	transcript	ENST00000494857.6	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr8	TogoVar
SLC7A7_chr14_22768222_22820435	22772503	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG03195.hp2 HG03540.hp1 HG01243.hp1 HG03195.hp2 HG03540.hp1	a0001 a0001	a0001c0006 a0001c0007 a0001c0010 a0001c0006 a0001c0007 a0001c0010	a0001c0006t0001 a0001c0007t0003 a0001c0010t0001 a0001c0006t0001 a0001c0007t0003 a0001c0010t0001	a0001c0006t0001g0082 a0001c0007t0003g0396 a0001c0010t0001g0087 a0001c0006t0001g0082 a0001c0007t0003g0396 a0001c0010t0001g0087	3	399	0.0075	-17	c.10 others(28): Show c.1090_*1106delGTTTTTTTTTTTTTTTT	SLC7A7	ENSG00000155465.21	transcript	ENST00000674313.1	protein_coding		718		chr14	TogoVar
SLC7A7_chr14_22768222_22820435	22795398	CTTTCTTT others(10): Show CTTTCTTTCTTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0386 a0001c0002t0006g0386	1	332	0.0030	-17	c.500 others(36): Show c.500-15364_500-15348delAGAAAGAAAGAAAGAAA	SLC7A7	ENSG00000155465.21	transcript	ENST00000674313.1	protein_coding	2/9			chr14	TogoVar
SLC7A9_chr19_32825511_32874767	32846877	ACAGCCAC others(10): Show ACAGCCACTGCTGTTCTG	A A	intron_variant intron_variant	MODIFIER	NA18995.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0286 a0001c0001t0001g0286	1	402	0.0025	-17	c.978 others(34): Show c.978-2943_978-2927delCAGAACAGCAGTGGCTG	SLC7A9	ENSG00000021488.13	transcript	ENST00000023064.9	protein_coding	9/12			chr19	TogoVar
SLC8A1_chr2_40092270_40457090	40253266	CATGTACA others(10): Show CATGTACATATGACGTAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0009 a0001c0001t0047g0009	1	234	0.0043	-17	c.180 others(38): Show c.1809-74790_1809-74774delATACGTCATATGTACAT	SLC8A1	ENSG00000183023.19	transcript	ENST00000332839.9	protein_coding	2/10			chr2	TogoVar
SLC8A1_chr2_40092270_40457090	40448117	CACTGGAA others(10): Show CACTGGAAAATACATCAG	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0178 a0001c0001t0178	a0001c0001t0178g0012 a0001c0001t0178g0012	1	234	0.0043	-17	c.-25 others(34): Show c.-25+3770_-25+3786delCTGATGTATTTTCCAGT	SLC8A1	ENSG00000183023.19	transcript	ENST00000332839.9	protein_coding	1/10			chr2	TogoVar
SLC8A2_chr19_47423017_47476893	47424375	GCTCACTG others(10): Show GCTCACTGCAGACTCTGC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0189 a0001c0001t0002g0189	1	314	0.0032	-17	c.56 others(28): Show c.5697_*5713delGCAGAGTCTGCAGTGAG	SLC8A2	ENSG00000118160.14	transcript	ENST00000236877.11	protein_coding		3641		chr19	TogoVar
SLC8A3_chr14_70039215_70193951	70174651	GTTTTTTT others(10): Show GTTTTTTTTTTGTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0159 a0001c0003t0011g0159	1	230	0.0043	-17	c.-62 others(34): Show c.-62-6184_-62-6168delAAAAAACAAAAAAAAAA	SLC8A3	ENSG00000100678.20	transcript	ENST00000356921.7	protein_coding	1/6			chr14	TogoVar
SLC8B1_chr12_113293771_113340109	113300043	CACAACAA others(10): Show CACAACAATGCAGCCTCA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02970.hp2 HG03130.hp1 HG02809.hp2 HG02970.hp2 HG03130.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0034 a0002c0002t0005g0035 a0002c0002t0005g0036 a0002c0002t0005g0034 a0002c0002t0005g0035 a0002c0002t0005g0036	3	282	0.0106	-17	c.155 others(32): Show c.1558-86_1558-70delTGAGGCTGCATTGTTGT	SLC8B1	ENSG00000089060.12	transcript	ENST00000680972.1	protein_coding	15/15			chr12	TogoVar
SLC9A1_chr1_27093809_27160125	27144532	GTCTGGTG others(10): Show GTCTGGTGCCAAGGAGCC	G G	intron_variant intron_variant	MODIFIER	HG02165.hp2 NA18975.hp2 NA19077.hp2 HG02165.hp2 NA18975.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0206 a0001c0001t0008g0207 a0001c0001t0008g0208 a0001c0001t0008g0206 a0001c0001t0008g0207 a0001c0001t0008g0208	3	232	0.0129	-17	c.352 others(34): Show c.352+9434_352+9450delGGCTCCTTGGCACCAGA	SLC9A1	ENSG00000090020.11	transcript	ENST00000263980.8	protein_coding	1/11			chr1	TogoVar
SLC9A3_chr5_465456_529449	500479	GGGGGCCG others(10): Show GGGGGCCGGTGTGGACAC	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01071.hp1 HG01243.hp1 others(3): Show HG00735.hp1 HG01071.hp1 HG01243.hp1 HG03688.hp2 HG04115.hp1 NA18942.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0003 a0001c0009 a0001c0030 others(2): Show a0001c0003 a0001c0009 a0001c0030 a0002c0002 a0006c0016	a0001c0003t0008 a0001c0009t0008 a0001c0030t0008 others(2): Show a0001c0003t0008 a0001c0009t0008 a0001c0030t0008 a0002c0002t0002 a0006c0016t0002	a0001c0003t0008g0152 a0001c0009t0008g0151 a0001c0030t0008g0150 others(3): Show a0001c0003t0008g0152 a0001c0009t0008g0151 a0001c0030t0008g0150 a0002c0002t0002g0148 a0002c0002t0002g0149 a0006c0016t0002g0017	6	216	0.0278	-17	c.212 others(34): Show c.212-8425_212-8409delGTGTCCACACCGGCCCC	SLC9A3	ENSG00000066230.12	transcript	ENST00000264938.8	protein_coding	1/16			chr5	TogoVar
SLC9A3_chr5_465456_529449	524799	GCCTGGGG others(10): Show GCCTGGGGCTGCGCAGAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19004.hp1 NA19004.hp1	a0001 a0001	a0001c0021 a0001c0021	a0001c0021t0032 a0001c0021t0032	a0001c0021t0032g0204 a0001c0021t0032g0204	1	216	0.0046	-17	c.-49 others(26): Show c.-494_-478delGTCTGCGCAGCCCCAGG	SLC9A3	ENSG00000066230.12	transcript	ENST00000264938.8	protein_coding		351		chr5	TogoVar
SLC9A5_chr16_67243979_67277191	67268674	ATATATAT others(10): Show ATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02451.hp1 HG02559.hp1 others(16): Show HG00738.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp1 HG02647.hp1 HG02809.hp2 HG02818.hp2 HG02922.hp2 HG02970.hp1 HG03017.hp1 HG03130.hp2 HG03209.hp2 HG03471.hp2 HG03516.hp1 HG03579.hp1 HG04199.hp2 NA18522.hp1 NA18906.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0002 a0001c0008t0002 a0001c0001t0002 a0001c0008t0002	a0001c0001t0002g0008 a0001c0001t0002g0018 a0001c0001t0002g0057 others(13): Show a0001c0001t0002g0008 a0001c0001t0002g0018 a0001c0001t0002g0057 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0008t0002g0139	19	199	0.0955	-17	c.221 others(36): Show c.2219-2063_2219-2047delTATATATATATATATAT	SLC9A5	ENSG00000135740.17	transcript	ENST00000299798.16	protein_coding	15/15			chr16	TogoVar
SLC9A7_chrX_46594251_46764118	46612924	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(125): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00423.hp2 HG00597.hp2 HG00609.hp1 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01361.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02083.hp1 HG02145.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02622.hp2 HG02630.hp2 HG02683.hp2 HG02717.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03669.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18940.hp1 NA18943.hp1 NA18945.hp1 NA18951.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18993.hp1 NA18994.hp1 NA19000.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19076.hp1 NA19077.hp2 NA19079.hp1 NA19082.hp1 NA19085.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0015 a0001c0001t0016 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0044 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0003t0011 a0001c0004t0001 a0001c0004t0004 a0001c0004t0015 a0001c0005t0004	a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0025 others(124): Show a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0136 a0001c0001t0001g0144 a0001c0001t0001g0151 a0001c0001t0001g0157 a0001c0001t0001g0163 a0001c0001t0001g0190 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0002g0057 a0001c0001t0003g0176 a0001c0001t0004g0042 a0001c0001t0004g0058 a0001c0001t0004g0063 a0001c0001t0004g0064 a0001c0001t0004g0069 a0001c0001t0004g0073 a0001c0001t0004g0100 a0001c0001t0004g0111 a0001c0001t0004g0113 a0001c0001t0004g0191 a0001c0001t0006g0024 a0001c0001t0006g0027 a0001c0001t0006g0040 a0001c0001t0006g0041 a0001c0001t0006g0120 a0001c0001t0006g0121 a0001c0001t0006g0123 a0001c0001t0006g0124 a0001c0001t0006g0134 a0001c0001t0006g0138 a0001c0001t0007g0021 a0001c0001t0007g0028 a0001c0001t0007g0037 a0001c0001t0007g0126 a0001c0001t0007g0142 a0001c0001t0007g0202 a0001c0001t0007g0204 a0001c0001t0008g0005 a0001c0001t0008g0007 a0001c0001t0008g0008 a0001c0001t0008g0009 a0001c0001t0009g0002 a0001c0001t0009g0003 a0001c0001t0009g0004 a0001c0001t0010g0014 a0001c0001t0010g0015 a0001c0001t0010g0016 a0001c0001t0015g0206 a0001c0001t0015g0207 a0001c0001t0016g0012 a0001c0001t0016g0013 a0001c0001t0021g0022 a0001c0001t0021g0023 a0001c0001t0022g0056 a0001c0001t0023g0018 a0001c0001t0024g0017 a0001c0001t0025g0006 a0001c0001t0026g0010 a0001c0001t0027g0011 a0001c0001t0028g0031 a0001c0001t0044g0030 a0001c0001t0048g0089 a0001c0001t0049g0180 a0001c0001t0050g0127 a0001c0001t0051g0186 a0001c0003t0011g0128 a0001c0003t0011g0133 a0001c0004t0001g0001 a0001c0004t0004g0225 a0001c0004t0015g0215 a0001c0005t0004g0033 a0001c0005t0004g0034	128	154	0.8312	-17	c.192 others(34): Show c.1929+348_1929+364delTTTTTTTTTTTTTTTTT	SLC9A7	ENSG00000065923.10	transcript	ENST00000616978.5	protein_coding	16/16			chrX	TogoVar
SLC9A7_chrX_46594251_46764118	46633336	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA18948.hp1 NA21309.hp1 NA18948.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0003 a0001c0001t0005	a0001c0001t0003g0169 a0001c0001t0005g0095 a0001c0001t0003g0169 a0001c0001t0005g0095	2	15	0.1333	-17	c.167 others(36): Show c.1677-1704_1677-1688delTTTTTTTTTTTTTTTTT	SLC9A7	ENSG00000065923.10	transcript	ENST00000616978.5	protein_coding	13/16			chrX	TogoVar
SLC9A7_chrX_46594251_46764118	46738092	AAAGAAAG others(10): Show AAAGAAAGAAAGAAAGAG	A A	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG01106.hp1 others(7): Show HG01069.hp1 HG01071.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp1 HG01361.hp2 HG01981.hp1 NA18952.hp1 NA19086.hp1 NA20300.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 a0001c0002 a0001c0003 a0001c0004	a0001c0002t0002 a0001c0003t0002 a0001c0004t0001 others(1): Show a0001c0002t0002 a0001c0003t0002 a0001c0004t0001 a0001c0004t0015	a0001c0002t0002g0218 a0001c0002t0002g0221 a0001c0002t0002g0224 others(6): Show a0001c0002t0002g0218 a0001c0002t0002g0221 a0001c0002t0002g0224 a0001c0002t0002g0228 a0001c0002t0002g0239 a0001c0002t0002g0246 a0001c0003t0002g0043 a0001c0004t0001g0001 a0001c0004t0015g0215	10	248	0.0403	-17	c.325 others(36): Show c.325+20596_325+20612delCTCTTTCTTTCTTTCTT	SLC9A7	ENSG00000065923.10	transcript	ENST00000616978.5	protein_coding	1/16			chrX	TogoVar
SLC9A8_chr20_49807828_49897242	49834371	ATATATAT others(10): Show ATATATATATATACTGTG	A A	intron_variant intron_variant	MODIFIER	NA18956.hp2 NA19086.hp2 NA18956.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0288 a0001c0001t0001g0291 a0001c0001t0001g0288 a0001c0001t0001g0291	2	302	0.0066	-17	c.290 others(34): Show c.290-5136_290-5120delGTATATATATATACTGT	SLC9A8	ENSG00000197818.12	transcript	ENST00000361573.3	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
SLC9A8_chr20_49807828_49897242	49844619	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(127): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp2 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp1 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01175.hp1 HG01243.hp2 HG01257.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01975.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18940.hp2 NA18944.hp1 NA18950.hp1 NA18951.hp2 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18966.hp1 NA18969.hp2 NA18974.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18989.hp2 NA18993.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19005.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19065.hp2 NA19080.hp1 NA19082.hp1 NA19240.hp1 NA20129.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0008 a0001c0001 a0001c0003 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0024 a0001c0001t0034 a0001c0001t0035 a0001c0003t0001 a0001c0003t0003 a0001c0003t0007 a0001c0003t0008 a0001c0003t0009 a0001c0003t0010 a0001c0003t0014 a0001c0003t0017 a0001c0003t0022 a0001c0003t0030 a0001c0003t0031 a0001c0003t0038 a0001c0008t0003	a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 others(122): Show a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0153 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0002g0097 a0001c0001t0003g0001 a0001c0001t0003g0002 a0001c0001t0003g0003 a0001c0001t0003g0053 a0001c0001t0003g0061 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0094 a0001c0001t0003g0095 a0001c0001t0003g0096 a0001c0001t0003g0098 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0003g0112 a0001c0001t0003g0113 a0001c0001t0003g0114 a0001c0001t0003g0124 a0001c0001t0003g0128 a0001c0001t0003g0300 a0001c0001t0003g0301 a0001c0001t0003g0302 a0001c0001t0003g0303 a0001c0001t0004g0130 a0001c0001t0004g0131 a0001c0001t0004g0132 a0001c0001t0004g0133 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0004g0136 a0001c0001t0004g0137 a0001c0001t0004g0138 a0001c0001t0004g0139 a0001c0001t0004g0140 a0001c0001t0004g0141 a0001c0001t0004g0143 a0001c0001t0004g0144 a0001c0001t0004g0145 a0001c0001t0004g0148 a0001c0001t0004g0150 a0001c0001t0004g0151 a0001c0001t0005g0100 a0001c0001t0009g0104 a0001c0001t0012g0111 a0001c0001t0012g0176 a0001c0001t0015g0146 a0001c0001t0015g0147 a0001c0001t0016g0005 a0001c0001t0024g0142 a0001c0001t0034g0054 a0001c0001t0035g0099 a0001c0003t0001g0004 a0001c0003t0001g0055 a0001c0003t0001g0056 a0001c0003t0001g0057 a0001c0003t0001g0058 a0001c0003t0001g0071 a0001c0003t0001g0072 a0001c0003t0001g0073 a0001c0003t0001g0074 a0001c0003t0001g0075 a0001c0003t0001g0076 a0001c0003t0001g0115 a0001c0003t0001g0116 a0001c0003t0001g0117 a0001c0003t0001g0121 a0001c0003t0001g0122 a0001c0003t0001g0126 a0001c0003t0001g0127 a0001c0003t0001g0152 a0001c0003t0001g0155 a0001c0003t0001g0156 a0001c0003t0001g0158 a0001c0003t0001g0159 a0001c0003t0001g0160 a0001c0003t0001g0161 a0001c0003t0001g0162 a0001c0003t0001g0171 a0001c0003t0001g0172 a0001c0003t0001g0173 a0001c0003t0001g0175 a0001c0003t0001g0321 a0001c0003t0003g0118 a0001c0003t0003g0119 a0001c0003t0003g0129 a0001c0003t0007g0070 a0001c0003t0008g0166 a0001c0003t0008g0167 a0001c0003t0008g0169 a0001c0003t0008g0174 a0001c0003t0009g0059 a0001c0003t0009g0120 a0001c0003t0010g0165 a0001c0003t0010g0170 a0001c0003t0014g0154 a0001c0003t0017g0157 a0001c0003t0022g0168 a0001c0003t0030g0164 a0001c0003t0031g0123 a0001c0003t0038g0125 a0001c0008t0003g0083	130	181	0.7182	-17	c.349 others(32): Show c.349-402_349-386delAAAAAAAAAAAAAAAAA	SLC9A8	ENSG00000197818.12	transcript	ENST00000361573.3	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
SLC9A9_chr3_143260222_143853468	143595245	ATCATATT others(10): Show ATCATATTTCTTTTGGCT	A A	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0031 a0001c0001t0002g0031	1	106	0.0094	-17	c.756 others(36): Show c.756-16539_756-16523delAGCCAAAAGAAATATGA	SLC9A9	ENSG00000181804.15	transcript	ENST00000316549.11	protein_coding	6/15			chr3	TogoVar
SLC9C2_chr1_173495460_173608072	173599362	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG02055.hp1 others(16): Show HG01070.hp1 HG01071.hp1 HG02055.hp1 HG02109.hp2 HG02257.hp2 HG02486.hp1 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03453.hp2 HG03516.hp2 HG06807.hp2	a0001 a0008 a0001 a0008	a0001c0004 a0001c0005 a0008c0019 a0001c0004 a0001c0005 a0008c0019	a0001c0004t0003 a0001c0005t0001 a0008c0019t0003 a0001c0004t0003 a0001c0005t0001 a0008c0019t0003	a0001c0004t0003g0043 a0001c0004t0003g0044 a0001c0004t0003g0045 others(15): Show a0001c0004t0003g0043 a0001c0004t0003g0044 a0001c0004t0003g0045 a0001c0004t0003g0046 a0001c0004t0003g0047 a0001c0004t0003g0048 a0001c0004t0003g0049 a0001c0004t0003g0050 a0001c0004t0003g0051 a0001c0005t0001g0004 a0001c0005t0001g0052 a0001c0005t0001g0053 a0001c0005t0001g0054 a0001c0005t0001g0055 a0001c0005t0001g0056 a0001c0005t0001g0057 a0001c0005t0001g0058 a0008c0019t0003g0042	19	46	0.4130	-17	c.228 others(32): Show c.228+738_228+754delAAAAAAAAAAAAAAAAA	SLC9C2	ENSG00000162753.13	transcript	ENST00000367714.4	protein_coding	3/27			chr1	TogoVar
SLCO1B3_chr12_20805705_20921911	20869131	CCCCCGGG others(10): Show CCCCCGGGGAAAGGGTGA	C C	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG03540.hp1 HG02615.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0106 a0001c0001t0004g0111 a0001c0001t0004g0106 a0001c0001t0004g0111	2	282	0.0071	-17	c.728 others(34): Show c.728-6102_728-6086delCCCGGGGAAAGGGTGAC	SLCO1B3	ENSG00000111700.13	transcript	ENST00000381545.8	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20709887	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0012 a0001c0003t0012	a0001c0003t0012g0029 a0001c0003t0012g0029	1	219	0.0046	-17	c.405 others(34): Show c.405-1477_405-1461delAAAAAAAAAAAAAAAAA	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO3A1_chr15_91848708_92170903	92016237	ATAGATAG others(10): Show ATAGATAGATAGATAGAT	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0089 a0001c0002t0001g0089	1	188	0.0053	-17	c.647 others(36): Show c.647-78626_647-78610delTAGATAGATAGATAGAT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047256	TATATATA others(10): Show TATATATATAATATATAA	T T	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0020 a0001c0001t0003g0020	1	172	0.0058	-17	c.647 others(36): Show c.647-47615_647-47599delATATATAAATATATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047440	AATATATA others(10): Show AATATATAATATATAAAT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0177 a0001c0001t0060g0177	1	138	0.0072	-17	c.647 others(36): Show c.647-47415_647-47399delTATATAAATATATATAA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92166037	GGTTTTGT others(10): Show GGTTTTGTTTTGTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	188	0.0053	-17	c.29 others(28): Show c.2903_*2919delGTTTTGTTTTGTTTTTT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding		135		chr15	TogoVar
SLCO4A1_chr20_62637503_62677293	62660056	CTGCACTG others(10): Show CTGCACTGTGGGGAGGGA	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02818.hp1 HG02895.hp1 others(2): Show HG02647.hp1 HG02818.hp1 HG02895.hp1 HG02897.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0003 a0001c0012t0003 a0001c0012t0010 a0001c0001t0003 a0001c0012t0003 a0001c0012t0010	a0001c0001t0003g0352 a0001c0001t0003g0353 a0001c0012t0003g0341 others(1): Show a0001c0001t0003g0352 a0001c0001t0003g0353 a0001c0012t0003g0341 a0001c0012t0010g0040	5	430	0.0116	-17	c.888 others(32): Show c.888-352_888-336delACTGTGGGGAGGGATGC	SLCO4A1	ENSG00000101187.16	transcript	ENST00000217159.6	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr20	TogoVar
SLF2_chr10_100907963_100970134	100957330	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG04228.hp2 NA18991.hp1 NA18994.hp1 HG04228.hp2 NA18991.hp1 NA18994.hp1	a0002 a0009 a0002 a0009	a0002c0002 a0009c0010 a0002c0002 a0009c0010	a0002c0002t0001 a0009c0010t0001 a0002c0002t0001 a0009c0010t0001	a0002c0002t0001g0260 a0002c0002t0001g0266 a0009c0010t0001g0052 a0002c0002t0001g0260 a0002c0002t0001g0266 a0009c0010t0001g0052	3	36	0.0833	-17	c.341 others(34): Show c.3417+814_3417+830delTTTTTTTTTTTTTTTTT	SLF2	ENSG00000119906.13	transcript	ENST00000238961.9	protein_coding	18/19		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLFN12L_chr17_35459254_35542678	35530412	AGGAAGGA others(10): Show AGGAAGGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01106.hp2 HG01192.hp2 others(9): Show HG01070.hp2 HG01106.hp2 HG01192.hp2 HG01361.hp2 HG01433.hp1 HG01891.hp2 HG02004.hp2 HG02074.hp1 HG02451.hp2 HG03490.hp2 HG03492.hp1 NA19077.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0013 others(3): Show a0001c0001 a0001c0002 a0001c0013 a0002c0003 a0003c0005 a0004c0004	a0001c0001t0008 a0001c0001t0016 a0001c0001t0110 others(6): Show a0001c0001t0008 a0001c0001t0016 a0001c0001t0110 a0001c0002t0002 a0001c0002t0131 a0001c0013t0112 a0002c0003t0122 a0003c0005t0007 a0004c0004t0009	a0001c0001t0008g0111 a0001c0001t0008g0114 a0001c0001t0016g0157 others(9): Show a0001c0001t0008g0111 a0001c0001t0008g0114 a0001c0001t0016g0157 a0001c0001t0110g0130 a0001c0002t0002g0115 a0001c0002t0002g0135 a0001c0002t0131g0125 a0001c0013t0112g0126 a0002c0003t0122g0154 a0003c0005t0007g0149 a0003c0005t0007g0150 a0004c0004t0009g0108	12	346	0.0347	-17	c.-60 others(36): Show c.-606+7144_-606+7160delCTTCCTTCCTTCCTTCC	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLFN12L_chr17_35459254_35542678	35530426	GAAGGGAA others(10): Show GAAGGGAAGGGAAGGGAA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0023 a0003c0007t0023	a0003c0007t0023g0087 a0003c0007t0023g0087	1	357	0.0028	-17	c.-60 others(36): Show c.-606+7130_-606+7146delTTCCCTTCCCTTCCCTT	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLFN12L_chr17_35459254_35542678	35530430	GGAAGGGA others(10): Show GGAAGGGAAGGGAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01978.hp2 HG01258.hp2 HG01978.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0084 a0002c0003t0011 a0001c0002t0084 a0002c0003t0011	a0001c0002t0084g0347 a0002c0003t0011g0015 a0001c0002t0084g0347 a0002c0003t0011g0015	2	351	0.0057	-17	c.-60 others(36): Show c.-606+7126_-606+7142delTTTCTTCCCTTCCCTTC	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLFN12L_chr17_35459254_35542678	35530434	GGGAAGGG others(10): Show GGGAAGGGAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03486.hp2 HG02647.hp2 HG03486.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0027 a0006c0008t0039 a0001c0001t0027 a0006c0008t0039	a0001c0001t0027g0003 a0006c0008t0039g0178 a0001c0001t0027g0003 a0006c0008t0039g0178	2	340	0.0059	-17	c.-60 others(36): Show c.-606+7122_-606+7138delTTTCTTTCTTCCCTTCC	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLFN12L_chr17_35459254_35542678	35530505	AAAGAAAG others(10): Show AAAGAAAGAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01516.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0337 a0001c0002t0010g0337	1	334	0.0030	-17	c.-60 others(36): Show c.-606+7051_-606+7067delCTTTTCTTTTCTTTCTT	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLIT2_chr4_20246905_20625561	20291492	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0038 a0001c0002t0038	a0001c0002t0038g0005 a0001c0002t0038g0005	1	188	0.0053	-17	c.395 others(36): Show c.395+22626_395+22642delTTTTTTTTTTTTTTTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT3_chr5_168656740_169306139	168834686	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG03927.hp1 HG03927.hp2 HG01255.hp2 HG03927.hp1 HG03927.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0021 a0001c0001 a0002c0021	a0001c0001t0001 a0002c0021t0002 a0001c0001t0001 a0002c0021t0002	a0001c0001t0001g0019 a0001c0001t0001g0072 a0002c0021t0002g0061 a0001c0001t0001g0019 a0001c0001t0001g0072 a0002c0021t0002g0061	3	24	0.1250	-17	c.557 others(34): Show c.557+9881_557+9897delTTTTTTTTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	6/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168953662	TGCAGAGC others(10): Show TGCAGAGCCCAGTGCCTG	T T	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02055.hp1 HG02145.hp1 others(2): Show HG01192.hp2 HG02055.hp1 HG02145.hp1 HG02486.hp1 HG02922.hp2	a0001 a0006 a0001 a0006	a0001c0006 a0001c0007 a0001c0026 others(2): Show a0001c0006 a0001c0007 a0001c0026 a0001c0038 a0006c0034	a0001c0006t0002 a0001c0007t0003 a0001c0026t0004 others(2): Show a0001c0006t0002 a0001c0007t0003 a0001c0026t0004 a0001c0038t0011 a0006c0034t0012	a0001c0006t0002g0063 a0001c0007t0003g0124 a0001c0026t0004g0067 others(2): Show a0001c0006t0002g0063 a0001c0007t0003g0124 a0001c0026t0004g0067 a0001c0038t0011g0066 a0006c0034t0012g0046	5	132	0.0379	-17	c.414 others(36): Show c.414-70343_414-70327delCAGGCACTGGGCTCTGC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168994623	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG03834.hp1 HG03834.hp2 others(2): Show HG02129.hp2 HG03834.hp1 HG03834.hp2 NA19012.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0009 others(1): Show a0001c0001 a0001c0003 a0001c0009 a0001c0020	a0001c0001t0001 a0001c0003t0004 a0001c0009t0001 others(1): Show a0001c0001t0001 a0001c0003t0004 a0001c0009t0001 a0001c0020t0003	a0001c0001t0001g0025 a0001c0001t0001g0081 a0001c0003t0004g0045 others(2): Show a0001c0001t0001g0025 a0001c0001t0001g0081 a0001c0003t0004g0045 a0001c0009t0001g0059 a0001c0020t0003g0109	5	21	0.2381	-17	c.414 others(38): Show c.414-111304_414-111288delAAAAAAAAAAAAAAAAA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169079819	AGGAGGGA others(10): Show AGGAGGGAGGAGGAGGAG	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02922.hp1 HG03098.hp2 HG02055.hp2 HG02922.hp1 HG03098.hp2	a0001 a0011 a0001 a0011	a0001c0004 a0001c0020 a0011c0031 a0001c0004 a0001c0020 a0011c0031	a0001c0004t0010 a0001c0020t0001 a0011c0031t0006 a0001c0004t0010 a0001c0020t0001 a0011c0031t0006	a0001c0004t0010g0131 a0001c0020t0001g0073 a0011c0031t0006g0084 a0001c0004t0010g0131 a0001c0020t0001g0073 a0011c0031t0006g0084	3	5	0.6000	-17	c.413 others(38): Show c.413+113643_413+113659delCTCCTCCTCCTCCCTCC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169089019	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03516.hp1 NA19240.hp1 others(1): Show HG03209.hp2 HG03516.hp1 NA19240.hp1 NA20129.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0013	a0001c0004 a0002c0029 a0004c0036 others(1): Show a0001c0004 a0002c0029 a0004c0036 a0013c0027	a0001c0004t0005 a0002c0029t0005 a0004c0036t0010 others(1): Show a0001c0004t0005 a0002c0029t0005 a0004c0036t0010 a0013c0027t0010	a0001c0004t0005g0008 a0002c0029t0005g0015 a0004c0036t0010g0129 others(1): Show a0001c0004t0005g0008 a0002c0029t0005g0015 a0004c0036t0010g0129 a0013c0027t0010g0125	4	12	0.3333	-17	c.413 others(38): Show c.413+104443_413+104459delTTTTTTTTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169119468	ACAGGAAT others(10): Show ACAGGAATGAAATAGTGG	A A	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0106 a0001c0001t0003g0106	1	132	0.0076	-17	c.413 others(36): Show c.413+73994_413+74010delCCACTATTTCATTCCTG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169201983	GCACTTTG others(10): Show GCACTTTGGGAGGCCAAA	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00735.hp2 HG01081.hp1 others(76): Show HG00639.hp2 HG00735.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01993.hp1 HG02015.hp2 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02735.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04115.hp1 NA18522.hp2 NA18747.hp2 NA18957.hp1 NA18957.hp2 NA18970.hp2 NA18974.hp1 NA18989.hp1 NA18989.hp2 NA19007.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19066.hp1 NA19066.hp2 NA20129.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0006 a0007 a0008 a0009 a0015	a0001c0001 a0001c0003 a0001c0004 others(42): Show a0001c0001 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0001c0014 a0001c0015 a0001c0016 a0001c0017 a0001c0020 a0001c0026 a0001c0038 a0001c0040 a0001c0042 a0001c0047 a0001c0048 a0001c0052 a0001c0058 a0001c0059 a0002c0002 a0002c0005 a0002c0008 a0002c0011 a0002c0012 a0002c0019 a0002c0029 a0002c0030 a0002c0043 a0002c0046 a0002c0049 a0002c0060 a0002c0061 a0002c0062 a0003c0057 a0004c0025 a0004c0036 a0004c0039 a0006c0034 a0007c0045 a0008c0035 a0009c0024 a0015c0028	a0001c0001t0001 a0001c0001t0003 a0001c0001t0024 others(56): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0024 a0001c0003t0004 a0001c0003t0031 a0001c0004t0006 a0001c0004t0013 a0001c0006t0002 a0001c0006t0009 a0001c0007t0001 a0001c0007t0014 a0001c0009t0001 a0001c0009t0012 a0001c0010t0008 a0001c0013t0001 a0001c0014t0002 a0001c0014t0009 a0001c0015t0006 a0001c0015t0016 a0001c0016t0008 a0001c0017t0001 a0001c0020t0001 a0001c0026t0004 a0001c0038t0011 a0001c0040t0001 a0001c0042t0032 a0001c0047t0011 a0001c0048t0004 a0001c0052t0005 a0001c0058t0009 a0001c0059t0004 a0002c0002t0005 a0002c0002t0018 a0002c0002t0019 a0002c0002t0021 a0002c0002t0023 a0002c0002t0034 a0002c0005t0003 a0002c0008t0002 a0002c0011t0005 a0002c0012t0004 a0002c0019t0001 a0002c0029t0005 a0002c0030t0002 a0002c0043t0027 a0002c0046t0001 a0002c0049t0003 a0002c0060t0001 a0002c0061t0011 a0002c0062t0029 a0003c0057t0017 a0004c0025t0006 a0004c0036t0010 a0004c0039t0006 a0006c0034t0012 a0007c0045t0002 a0008c0035t0004 a0009c0024t0028 a0015c0028t0006	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(76): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0034 a0001c0001t0001g0041 a0001c0001t0001g0072 a0001c0001t0001g0081 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0003g0099 a0001c0001t0003g0110 a0001c0001t0003g0122 a0001c0001t0024g0069 a0001c0003t0004g0045 a0001c0003t0031g0026 a0001c0004t0006g0054 a0001c0004t0013g0001 a0001c0004t0013g0002 a0001c0006t0002g0039 a0001c0006t0002g0043 a0001c0006t0002g0063 a0001c0006t0009g0113 a0001c0007t0001g0040 a0001c0007t0001g0095 a0001c0007t0014g0055 a0001c0009t0001g0057 a0001c0009t0001g0059 a0001c0009t0012g0035 a0001c0010t0008g0068 a0001c0010t0008g0071 a0001c0013t0001g0094 a0001c0014t0002g0028 a0001c0014t0009g0112 a0001c0015t0006g0070 a0001c0015t0016g0089 a0001c0016t0008g0080 a0001c0017t0001g0029 a0001c0017t0001g0062 a0001c0020t0001g0073 a0001c0026t0004g0067 a0001c0038t0011g0066 a0001c0040t0001g0093 a0001c0042t0032g0130 a0001c0047t0011g0012 a0001c0048t0004g0064 a0001c0052t0005g0088 a0001c0058t0009g0097 a0001c0059t0004g0027 a0002c0002t0005g0082 a0002c0002t0018g0107 a0002c0002t0019g0105 a0002c0002t0021g0038 a0002c0002t0023g0086 a0002c0002t0034g0111 a0002c0005t0003g0118 a0002c0005t0003g0128 a0002c0008t0002g0023 a0002c0008t0002g0042 a0002c0011t0005g0065 a0002c0011t0005g0075 a0002c0012t0004g0031 a0002c0019t0001g0009 a0002c0029t0005g0015 a0002c0030t0002g0033 a0002c0043t0027g0052 a0002c0046t0001g0060 a0002c0049t0003g0127 a0002c0060t0001g0058 a0002c0061t0011g0051 a0002c0062t0029g0032 a0003c0057t0017g0096 a0004c0025t0006g0013 a0004c0036t0010g0129 a0004c0039t0006g0087 a0006c0034t0012g0046 a0007c0045t0002g0079 a0008c0035t0004g0049 a0009c0024t0028g0076 a0015c0028t0006g0014	79	132	0.5985	-17	c.342 others(34): Show c.342-8450_342-8434delTTTGGCCTCCCAAAGTG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	3/35			chr5	TogoVar
SLITRK2_chrX_145812829_145834856	145832445	CAACTTTG others(10): Show CAACTTTGGTTCTCTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0042	a0001c0001t0042g0004 a0001c0001t0042g0004	1	324	0.0031	-17	c.74 others(28): Show c.7483_*7499delAACTTTGGTTCTCTGTG	SLITRK2	ENSG00000185985.11	transcript	ENST00000335565.6	protein_coding		2590		chrX	TogoVar
SLITRK5_chr13_87666371_87684616	87679846	AGTATATA others(10): Show AGTATATATAGTATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00741.hp2 HG01192.hp1 others(1): Show HG00323.hp2 HG00741.hp2 HG01192.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	4	402	0.0100	-17	c.15 others(28): Show c.1582_*1598delGTATATATAGTATATAT	SLITRK5	ENSG00000165300.8	transcript	ENST00000683689.1	protein_coding		231		chr13	TogoVar
SLMAP_chr3_57751309_57935003	57848513	TCTTCTTC others(10): Show TCTTCTTCCTTCTTTCTC	T T	intron_variant intron_variant	MODIFIER	HG02080.hp1 NA18950.hp1 NA19068.hp1 HG02080.hp1 NA18950.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0041 a0001c0001t0002g0048 a0001c0001t0002g0029 a0001c0001t0002g0041 a0001c0001t0002g0048	3	308	0.0097	-17	c.457 others(34): Show c.457-1229_457-1213delTTTCTCCTTCTTCCTTC	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	5/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57853953	AATTATAT others(10): Show AATTATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0192 a0001c0001t0003g0192	1	302	0.0033	-17	c.520 others(34): Show c.520-3777_520-3761delTATATATATATATATAT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	6/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57853956	TATATATA others(10): Show TATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0009 a0001c0001t0003g0009	1	259	0.0039	-17	c.520 others(34): Show c.520-3776_520-3760delATATATATATATATATA	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	6/24			chr3	TogoVar
SLMAP_chr3_57751309_57935003	57885771	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02809.hp2 HG02886.hp1 others(1): Show HG02647.hp1 HG02809.hp2 HG02886.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0300 a0001c0001t0010g0301 a0001c0001t0010g0302 others(1): Show a0001c0001t0010g0300 a0001c0001t0010g0301 a0001c0001t0010g0302 a0001c0001t0010g0303	4	38	0.1053	-17	c.130 others(36): Show c.1301-4256_1301-4240delTTTTTTTTTTTTTTTTT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	14/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLTM_chr15_58874050_58938679	58933308	CGGCTGCG others(10): Show CGGCTGCGGGCAGCCGGA	C C	intron_variant intron_variant	MODIFIER	NA19078.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0021	1	383	0.0026	-17	c.162 others(30): Show c.162+79_162+95delTCCGGCTGCCCGCAGCC	SLTM	ENSG00000137776.17	transcript	ENST00000380516.7	protein_coding	1/20			chr15	TogoVar
SLU7_chr5_160396641_160424081	160423092	AATGCATA others(10): Show AATGCATATTTTTGCCTC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18960.hp2 NA19065.hp1 NA18960.hp2 NA19065.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	2	460	0.0043	-17	c.-41 others(28): Show c.-4103_-4087delGAGGCAAAAATATGCAT	SLU7	ENSG00000164609.10	transcript	ENST00000297151.9	protein_coding		4012		chr5	TogoVar
SLX4IP_chr20_10430305_10633030	10627931	CTGTTTAA others(10): Show CTGTTTAAATAGTTCAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02818.hp1 HG02922.hp2 HG03209.hp2 others(1): Show HG02818.hp1 HG02922.hp2 HG03209.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0067 a0001c0001t0013g0090 a0001c0001t0013g0095 others(1): Show a0001c0001t0013g0067 a0001c0001t0013g0090 a0001c0001t0013g0095 a0001c0001t0013g0227	4	264	0.0152	-17	c.45 others(28): Show c.4555_*4571delTTTAAATAGTTCAAATG	SLX4IP	ENSG00000149346.15	transcript	ENST00000334534.10	protein_coding	8/8	4555	INFO_REALIGN_3_PRIME	chr20	TogoVar

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