Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SMS_chrX_21935709_21999837	21988662	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp1 HG00544.hp1 others(51): Show HG00099.hp2 HG00438.hp1 HG00544.hp1 HG00558.hp1 HG00673.hp1 HG00735.hp1 HG01081.hp1 HG01081.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01256.hp1 HG01433.hp1 HG01516.hp1 HG01517.hp2 HG02055.hp1 HG02080.hp2 HG02109.hp1 HG02257.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02486.hp1 HG02615.hp1 HG02630.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02976.hp1 HG03098.hp1 HG03130.hp1 HG03209.hp1 HG03453.hp2 HG03486.hp1 HG04184.hp1 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18947.hp1 NA18955.hp1 NA18973.hp2 NA18978.hp1 NA18988.hp1 NA18997.hp1 NA19002.hp2 NA19030.hp1 NA19030.hp2 NA19066.hp1 NA19091.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 others(3): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0015 a0001c0002t0003	a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0011 others(51): Show a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0011 a0001c0001t0003g0012 a0001c0001t0003g0110 a0001c0001t0003g0111 a0001c0001t0003g0115 a0001c0001t0003g0120 a0001c0001t0003g0122 a0001c0001t0003g0159 a0001c0001t0003g0175 a0001c0001t0003g0215 a0001c0001t0003g0271 a0001c0001t0003g0292 a0001c0001t0004g0028 a0001c0001t0004g0043 a0001c0001t0004g0062 a0001c0001t0004g0063 a0001c0001t0004g0064 a0001c0001t0004g0066 a0001c0001t0004g0067 a0001c0001t0004g0068 a0001c0001t0004g0069 a0001c0001t0004g0071 a0001c0001t0004g0074 a0001c0001t0004g0102 a0001c0001t0004g0103 a0001c0001t0004g0104 a0001c0001t0004g0142 a0001c0001t0004g0144 a0001c0001t0004g0163 a0001c0001t0004g0174 a0001c0001t0005g0013 a0001c0001t0005g0132 a0001c0001t0005g0261 a0001c0001t0005g0262 a0001c0001t0005g0264 a0001c0001t0005g0266 a0001c0001t0005g0272 a0001c0001t0005g0273 a0001c0001t0005g0274 a0001c0001t0005g0278 a0001c0001t0005g0281 a0001c0001t0005g0283 a0001c0001t0006g0014 a0001c0001t0006g0046 a0001c0001t0006g0058 a0001c0001t0006g0082 a0001c0001t0006g0083 a0001c0001t0006g0086 a0001c0001t0006g0119 a0001c0001t0015g0004 a0001c0002t0003g0149 a0001c0002t0003g0169	54	298	0.1812	-17	c.945 others(34): Show c.945+3453_945+3469delAAAAAAAAAAAAAAAAA	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding	9/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
SMTNL2_chr17_4579529_4613319	4589938	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02622.hp1 HG02717.hp1 others(5): Show HG00738.hp2 HG02622.hp1 HG02717.hp1 HG03540.hp1 HG04228.hp1 HG06807.hp1 NA18995.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 others(1): Show a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 a0002c0001t0002	a0001c0003t0001g0245 a0001c0003t0001g0246 a0001c0003t0002g0018 others(3): Show a0001c0003t0001g0245 a0001c0003t0001g0246 a0001c0003t0002g0018 a0001c0003t0002g0186 a0001c0003t0004g0238 a0002c0001t0002g0332	8	442	0.0181	-17	c.400 others(34): Show c.400-2393_400-2377delTTTTTTTTTTTTTTTTT	SMTNL2	ENSG00000188176.12	transcript	ENST00000389313.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr17	TogoVar
SMTNL2_chr17_4579529_4613319	4602311	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0294 a0002c0001t0001g0294	1	442	0.0023	-17	c.125 others(36): Show c.1259+5000_1259+5016delTTTTTTTTTTTTTTTTT	SMTNL2	ENSG00000188176.12	transcript	ENST00000389313.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr17	TogoVar
SMTN_chr22_31076318_31109624	31081005	GCTCTGAG others(10): Show GCTCTGAGACTCCTACGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG00558.hp1 others(117): Show HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00621.hp1 HG00621.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01074.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01952.hp1 HG01978.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02155.hp2 HG02165.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02818.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03834.hp2 HG04199.hp2 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18939.hp1 NA18942.hp1 NA18944.hp2 NA18947.hp2 NA18952.hp1 NA18956.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18970.hp2 NA18973.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18990.hp2 NA18994.hp2 NA18997.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp2 NA19005.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19012.hp2 NA19043.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp2 NA19063.hp2 NA19065.hp2 NA19068.hp1 NA19074.hp2 NA19079.hp1 NA19081.hp2 NA19082.hp1 NA19085.hp1 NA19089.hp1 NA19090.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0006 a0010 a0014 a0015 a0017	a0001c0001 a0001c0012 a0002c0002 others(7): Show a0001c0001 a0001c0012 a0002c0002 a0003c0003 a0004c0004 a0006c0006 a0010c0015 a0014c0019 a0015c0018 a0017c0016	a0001c0001t0001 a0001c0001t0007 a0001c0001t0011 others(10): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0011 a0001c0012t0001 a0002c0002t0001 a0003c0003t0001 a0003c0003t0002 a0004c0004t0001 a0006c0006t0001 a0010c0015t0001 a0014c0019t0001 a0015c0018t0001 a0017c0016t0001	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0019 others(63): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0081 a0001c0001t0001g0115 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0007g0025 a0001c0001t0007g0138 a0001c0001t0011g0045 a0001c0012t0001g0042 a0002c0002t0001g0082 a0002c0002t0001g0120 a0003c0003t0001g0005 a0003c0003t0001g0008 a0003c0003t0001g0026 a0003c0003t0001g0043 a0003c0003t0001g0046 a0003c0003t0001g0053 a0003c0003t0001g0068 a0003c0003t0001g0106 a0003c0003t0001g0107 a0003c0003t0001g0109 a0003c0003t0001g0110 a0003c0003t0001g0111 a0003c0003t0001g0112 a0003c0003t0001g0119 a0003c0003t0001g0121 a0003c0003t0001g0170 a0003c0003t0001g0171 a0003c0003t0001g0174 a0003c0003t0002g0108 a0004c0004t0001g0015 a0004c0004t0001g0018 a0004c0004t0001g0064 a0004c0004t0001g0065 a0004c0004t0001g0066 a0004c0004t0001g0067 a0004c0004t0001g0114 a0004c0004t0001g0116 a0004c0004t0001g0117 a0004c0004t0001g0118 a0004c0004t0001g0141 a0006c0006t0001g0122 a0010c0015t0001g0005 a0014c0019t0001g0113 a0015c0018t0001g0172 a0017c0016t0001g0173	120	362	0.3315	-17	c.-53 others(26): Show c.-531_-515delCTCTGAGACTCCTACGA	SMTN	ENSG00000183963.19	transcript	ENST00000333137.12	protein_coding		312		chr22	TogoVar
SMUG1_chr12_54175366_54193985	54185488	ATAAATAA others(10): Show ATAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0171	1	438	0.0023	-17	c.-19 others(34): Show c.-19-1546_-19-1530delATTTATTTATTTATTTA	SMUG1	ENSG00000123415.16	transcript	ENST00000682136.1	protein_coding	2/3			chr12	TogoVar
SMURF1_chr7_99022440_99149108	99065111	TTTTTGAG others(10): Show TTTTTGAGACAGAGTCTC	T T	intron_variant intron_variant	MODIFIER	NA19057.hp2 NA19057.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0059 a0001c0002t0008g0059	1	264	0.0038	-17	c.56- others(32): Show c.56-3291_56-3275delGAGACTCTGTCTCAAAA	SMURF1	ENSG00000198742.10	transcript	ENST00000361368.7	protein_coding	1/17			chr7	TogoVar
SMURF1_chr7_99022440_99149108	99119003	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0112 a0001c0002t0001g0112	1	264	0.0038	-17	c.55+ others(34): Show c.55+24706_55+24722delAAAAAAAAAAAAAAAAA	SMURF1	ENSG00000198742.10	transcript	ENST00000361368.7	protein_coding	1/17			chr7	TogoVar
SMYD3_chr1_245744347_246512279	246225321	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02273.hp1 NA19000.hp2 HG00738.hp2 HG02273.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0046 a0001c0001t0002g0043 a0001c0001t0002g0068 a0001c0001t0001g0046 a0001c0001t0002g0043 a0001c0001t0002g0068	3	150	0.0200	-17	c.531 others(38): Show c.531+101863_531+101879delTTTTTTTTTTTTTTTTT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246255286	TTTTGATG others(10): Show TTTTGATGGATCTTATTA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00735.hp1 HG00738.hp1 others(22): Show HG00423.hp1 HG00735.hp1 HG00738.hp1 HG01081.hp2 HG01109.hp2 HG01496.hp2 HG01934.hp1 HG01952.hp1 HG01981.hp1 HG02056.hp2 HG02132.hp2 HG02273.hp2 HG02280.hp2 HG02615.hp2 HG02965.hp2 HG03831.hp1 HG04115.hp2 NA18962.hp1 NA18963.hp1 NA18971.hp1 NA19000.hp1 NA19057.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0006 others(5): Show a0001c0001 a0001c0002 a0001c0006 a0001c0012 a0002c0003 a0002c0004 a0002c0005 a0004c0013	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0006t0001 a0001c0012t0002 a0002c0003t0001 a0002c0003t0002 a0002c0004t0001 a0002c0005t0001 a0004c0013t0002	a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0044 others(22): Show a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0055 a0001c0001t0001g0090 a0001c0001t0001g0093 a0001c0001t0002g0052 a0001c0001t0002g0060 a0001c0001t0002g0087 a0001c0001t0002g0092 a0001c0002t0001g0015 a0001c0002t0001g0053 a0001c0002t0001g0056 a0001c0002t0001g0079 a0001c0002t0002g0010 a0001c0002t0002g0070 a0001c0002t0002g0083 a0001c0006t0001g0035 a0001c0012t0002g0074 a0002c0003t0001g0099 a0002c0003t0002g0131 a0002c0004t0001g0098 a0002c0004t0001g0121 a0002c0005t0001g0138 a0004c0013t0002g0072	25	150	0.1667	-17	c.531 others(36): Show c.531+71898_531+71914delTAATAAGATCCATCAAA	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246282305	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	150	0.0067	-17	c.531 others(36): Show c.531+44879_531+44895delTTTTTTTTTTTTTTTTT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246390214	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02004.hp2 HG02027.hp1 others(18): Show HG01175.hp2 HG02004.hp2 HG02027.hp1 HG02109.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02809.hp1 HG02886.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp2 HG03130.hp2 HG03195.hp2 HG03579.hp2 NA18962.hp2 NA18965.hp2 NA18971.hp1 NA19030.hp1 NA19086.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(6): Show a0001c0001 a0001c0002 a0001c0006 a0001c0009 a0001c0012 a0001c0014 a0002c0003 a0002c0004 a0002c0005	a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 a0001c0006t0001 a0001c0009t0001 a0001c0012t0002 a0001c0014t0002 a0002c0003t0001 a0002c0003t0002 a0002c0004t0001 a0002c0004t0002 a0002c0005t0001 a0002c0005t0002	a0001c0001t0001g0008 a0001c0001t0001g0018 a0001c0001t0001g0019 others(18): Show a0001c0001t0001g0008 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0047 a0001c0001t0001g0075 a0001c0001t0002g0017 a0001c0001t0002g0023 a0001c0002t0002g0078 a0001c0006t0001g0035 a0001c0009t0001g0002 a0001c0012t0002g0074 a0001c0014t0002g0091 a0002c0003t0001g0096 a0002c0003t0001g0137 a0002c0003t0002g0095 a0002c0003t0002g0102 a0002c0004t0001g0129 a0002c0004t0001g0140 a0002c0004t0002g0139 a0002c0005t0001g0138 a0002c0005t0002g0106	21	150	0.1400	-17	c.165 others(36): Show c.165-35137_165-35121delTTTTTTTTTTTTTTTTT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	1/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246407132	AAGGTGCT others(10): Show AAGGTGCTTATATCCCAC	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00544.hp1 others(27): Show HG00408.hp1 HG00423.hp2 HG00544.hp1 HG00621.hp2 HG01981.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp1 HG02056.hp1 HG02258.hp1 HG02280.hp2 HG02486.hp2 HG02602.hp1 HG02809.hp2 HG02895.hp2 HG02965.hp2 HG03017.hp1 HG03098.hp2 HG03209.hp1 HG03225.hp1 HG03491.hp1 HG04228.hp1 NA18962.hp2 NA18965.hp2 NA18971.hp1 NA18971.hp2 NA18984.hp1 NA18984.hp2 NA19086.hp2 NA19088.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(6): Show a0001c0001 a0001c0002 a0001c0006 a0001c0011 a0001c0012 a0001c0014 a0002c0003 a0002c0004 a0002c0005	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0006t0001 a0001c0011t0002 a0001c0012t0002 a0001c0014t0002 a0002c0003t0001 a0002c0003t0002 a0002c0004t0001 a0002c0005t0001 a0002c0005t0002	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(27): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0061 a0001c0001t0001g0069 a0001c0001t0001g0075 a0001c0001t0002g0030 a0001c0001t0002g0039 a0001c0001t0002g0080 a0001c0002t0001g0012 a0001c0002t0001g0024 a0001c0002t0001g0073 a0001c0002t0002g0078 a0001c0002t0002g0084 a0001c0006t0001g0035 a0001c0011t0002g0049 a0001c0012t0002g0074 a0001c0014t0002g0091 a0002c0003t0001g0100 a0002c0003t0001g0101 a0002c0003t0001g0109 a0002c0003t0001g0111 a0002c0003t0001g0144 a0002c0003t0002g0102 a0002c0003t0002g0104 a0002c0003t0002g0110 a0002c0004t0001g0119 a0002c0005t0001g0138 a0002c0005t0001g0146 a0002c0005t0002g0118	30	150	0.2000	-17	c.165 others(36): Show c.165-52055_165-52039delGTGGGATATAAGCACCT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	1/11			chr1	TogoVar
SMYD4_chr17_1774485_1834902	1826491	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00438.hp2 HG00597.hp2 others(121): Show HG00280.hp1 HG00438.hp2 HG00597.hp2 HG00673.hp2 HG00738.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01169.hp2 HG01243.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01891.hp2 HG01952.hp2 HG01975.hp1 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02145.hp1 HG02280.hp2 HG02451.hp2 HG02572.hp2 HG02622.hp2 HG02647.hp1 HG02698.hp2 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18952.hp1 NA18952.hp2 NA18955.hp2 NA18959.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18970.hp1 NA18972.hp1 NA18973.hp2 NA18974.hp1 NA18977.hp2 NA18978.hp2 NA18982.hp2 NA18984.hp1 NA18989.hp1 NA18992.hp1 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19007.hp2 NA19009.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19058.hp2 NA19066.hp2 NA19067.hp2 NA19084.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp1 NA20752.hp1 NA20905.hp2	a0003 a0006 a0008 others(9): Show a0003 a0006 a0008 a0009 a0011 a0012 a0013 a0016 a0017 a0018 a0021 a0028	a0003c0003 a0006c0005 a0008c0008 others(9): Show a0003c0003 a0006c0005 a0008c0008 a0009c0009 a0011c0011 a0012c0012 a0013c0013 a0016c0017 a0017c0020 a0018c0025 a0021c0026 a0028c0037	a0003c0003t0004 a0003c0003t0026 a0003c0003t0029 others(26): Show a0003c0003t0004 a0003c0003t0026 a0003c0003t0029 a0003c0003t0031 a0006c0005t0005 a0006c0005t0006 a0006c0005t0013 a0006c0005t0038 a0008c0008t0002 a0008c0008t0003 a0009c0009t0001 a0009c0009t0009 a0011c0011t0004 a0011c0011t0017 a0011c0011t0019 a0011c0011t0030 a0012c0012t0007 a0013c0013t0002 a0013c0013t0015 a0013c0013t0016 a0013c0013t0020 a0016c0017t0002 a0016c0017t0014 a0016c0017t0025 a0017c0020t0008 a0017c0020t0014 a0018c0025t0004 a0021c0026t0007 a0028c0037t0004	a0003c0003t0004g0003 a0003c0003t0004g0024 a0003c0003t0004g0027 others(114): Show a0003c0003t0004g0003 a0003c0003t0004g0024 a0003c0003t0004g0027 a0003c0003t0004g0029 a0003c0003t0004g0036 a0003c0003t0004g0038 a0003c0003t0004g0041 a0003c0003t0004g0043 a0003c0003t0004g0045 a0003c0003t0004g0046 a0003c0003t0004g0047 a0003c0003t0004g0048 a0003c0003t0004g0050 a0003c0003t0004g0053 a0003c0003t0004g0054 a0003c0003t0004g0062 a0003c0003t0004g0063 a0003c0003t0004g0064 a0003c0003t0004g0065 a0003c0003t0004g0066 a0003c0003t0004g0067 a0003c0003t0004g0068 a0003c0003t0004g0069 a0003c0003t0004g0070 a0003c0003t0004g0071 a0003c0003t0004g0073 a0003c0003t0004g0074 a0003c0003t0004g0075 a0003c0003t0004g0077 a0003c0003t0004g0078 a0003c0003t0026g0378 a0003c0003t0026g0379 a0003c0003t0029g0039 a0003c0003t0031g0044 a0006c0005t0005g0005 a0006c0005t0005g0084 a0006c0005t0005g0085 a0006c0005t0005g0088 a0006c0005t0005g0089 a0006c0005t0005g0092 a0006c0005t0005g0093 a0006c0005t0005g0096 a0006c0005t0005g0097 a0006c0005t0005g0103 a0006c0005t0006g0349 a0006c0005t0006g0353 a0006c0005t0006g0354 a0006c0005t0006g0356 a0006c0005t0006g0359 a0006c0005t0013g0345 a0006c0005t0013g0346 a0006c0005t0013g0347 a0006c0005t0013g0360 a0006c0005t0013g0361 a0006c0005t0038g0090 a0008c0008t0002g0001 a0008c0008t0002g0342 a0008c0008t0002g0350 a0008c0008t0002g0351 a0008c0008t0002g0352 a0008c0008t0002g0364 a0008c0008t0002g0365 a0008c0008t0002g0367 a0008c0008t0003g0091 a0008c0008t0003g0098 a0008c0008t0003g0102 a0009c0009t0001g0082 a0009c0009t0001g0086 a0009c0009t0001g0087 a0009c0009t0001g0094 a0009c0009t0001g0095 a0009c0009t0001g0099 a0009c0009t0001g0100 a0009c0009t0001g0101 a0009c0009t0009g0358 a0009c0009t0009g0366 a0009c0009t0009g0368 a0011c0011t0004g0034 a0011c0011t0004g0035 a0011c0011t0004g0042 a0011c0011t0004g0049 a0011c0011t0004g0060 a0011c0011t0017g0040 a0011c0011t0019g0032 a0011c0011t0019g0033 a0011c0011t0030g0058 a0012c0012t0007g0002 a0012c0012t0007g0004 a0012c0012t0007g0026 a0012c0012t0007g0028 a0012c0012t0007g0056 a0012c0012t0007g0072 a0012c0012t0007g0076 a0013c0013t0002g0355 a0013c0013t0015g0025 a0013c0013t0015g0051 a0013c0013t0015g0052 a0013c0013t0016g0055 a0013c0013t0016g0057 a0013c0013t0016g0059 a0013c0013t0020g0021 a0013c0013t0020g0061 a0016c0017t0002g0339 a0016c0017t0002g0340 a0016c0017t0002g0341 a0016c0017t0014g0348 a0016c0017t0025g0375 a0016c0017t0025g0376 a0017c0020t0008g0357 a0017c0020t0014g0338 a0017c0020t0014g0343 a0017c0020t0014g0344 a0018c0025t0004g0022 a0018c0025t0004g0023 a0021c0026t0007g0030 a0021c0026t0007g0031 a0028c0037t0004g0037	124	390	0.3180	-17	c.134 others(34): Show c.134+1353_134+1369delTTTTTTTTTTTTTTTTT	SMYD4	ENSG00000186532.12	transcript	ENST00000305513.12	protein_coding	2/10			chr17	TogoVar
SNAP25_chr20_10213830_10312418	10224257	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0025	1	340	0.0029	-17	c.-64 others(34): Show c.-64+5299_-64+5315delTTTTTTTTTTTTTTTTT	SNAP25	ENSG00000132639.15	transcript	ENST00000254976.7	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr20	TogoVar
SNAP91_chr6_83547885_83714101	83611863	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0323 a0001c0001t0001g0323	1	366	0.0027	-17	c.885 others(34): Show c.885-1203_885-1187delAAAAAAAAAAAAAAAAA	SNAP91	ENSG00000065609.15	transcript	ENST00000369694.7	protein_coding	11/29			chr6	TogoVar
SNAPC3_chr9_15417876_15466626	15441383	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01071.hp2 HG01361.hp2 others(5): Show HG01069.hp2 HG01071.hp2 HG01361.hp2 HG01891.hp1 HG02886.hp2 HG02965.hp2 HG03710.hp1 NA18522.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0007 a0002c0003t0007	a0002c0003t0007g0179 a0002c0003t0007g0180 a0002c0003t0007g0181 others(5): Show a0002c0003t0007g0179 a0002c0003t0007g0180 a0002c0003t0007g0181 a0002c0003t0007g0182 a0002c0003t0007g0183 a0002c0003t0007g0184 a0002c0003t0007g0185 a0002c0003t0007g0186	8	308	0.0260	-17	c.478 others(34): Show c.478-3211_478-3195delTTTTTTTTTTTTTTTTT	SNAPC3	ENSG00000164975.16	transcript	ENST00000380821.8	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNAPC3_chr9_15417876_15466626	15449553	ATATATAT others(10): Show ATATATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02895.hp1 HG02896.hp2 others(1): Show HG02258.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0019 a0001c0002t0006g0273 a0001c0002t0006g0274 a0001c0002t0006g0019 a0001c0002t0006g0273 a0001c0002t0006g0274	4	308	0.0130	-17	c.733 others(34): Show c.733-1765_733-1749delATATATATATTTTTTTT	SNAPC3	ENSG00000164975.16	transcript	ENST00000380821.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNCA_chr4_89719099_89842161	89738460	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	338	0.0030	-17	c.307 others(34): Show c.307-9200_307-9184delAAAAAAAAAAAAAAAAA	SNCA	ENSG00000145335.17	transcript	ENST00000394991.8	protein_coding	4/5			chr4	TogoVar
SND1_chr7_127647194_128097593	127922175	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18956.hp2 NA18956.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	262	0.0038	-17	c.152 others(36): Show c.1528-7001_1528-6985delTTTTTTTTTTTTTTTTT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SNIP1_chr1_37529449_37559293	37545083	GAATCAGT others(10): Show GAATCAGTCACTACTGGA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0161 a0001c0001t0041g0161	1	394	0.0025	-17	c.328 others(34): Show c.328-4345_328-4329delTCCAGTAGTGACTGATT	SNIP1	ENSG00000163877.11	transcript	ENST00000296215.8	protein_coding	2/3			chr1	TogoVar
SNRPC_chr6_34752505_34778857	34752678	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01109.hp1 HG02818.hp2 HG00738.hp1 HG01109.hp1 HG02818.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0096 a0001c0003t0001g0097 a0001c0003t0001g0173 a0001c0003t0001g0096 a0001c0003t0001g0097 a0001c0003t0001g0173	3	368	0.0082	-17	c.-48 others(28): Show c.-4865_-4849delAAAAAAAAAAAAAAAAA	SNRPC	ENSG00000124562.10	transcript	ENST00000244520.10	protein_coding		4826		chr6	TogoVar
SNRPD3_chr22_24550999_24579971	24560428	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01081.hp1 HG01109.hp1 others(15): Show HG00099.hp2 HG01081.hp1 HG01109.hp1 HG01891.hp2 HG02055.hp1 HG02109.hp2 HG02257.hp2 HG02451.hp1 HG02630.hp1 HG02683.hp2 HG02896.hp2 HG02970.hp1 HG03195.hp2 HG03225.hp2 NA18522.hp2 NA18906.hp2 NA18978.hp1 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0004 a0001c0002t0005 others(1): Show a0001c0002t0002 a0001c0002t0004 a0001c0002t0005 a0001c0002t0016	a0001c0002t0002g0221 a0001c0002t0002g0224 a0001c0002t0002g0257 others(14): Show a0001c0002t0002g0221 a0001c0002t0002g0224 a0001c0002t0002g0257 a0001c0002t0002g0258 a0001c0002t0002g0259 a0001c0002t0002g0260 a0001c0002t0002g0261 a0001c0002t0002g0263 a0001c0002t0002g0264 a0001c0002t0002g0275 a0001c0002t0004g0020 a0001c0002t0004g0268 a0001c0002t0004g0269 a0001c0002t0004g0270 a0001c0002t0004g0271 a0001c0002t0005g0273 a0001c0002t0016g0020	18	400	0.0450	-17	c.126 others(34): Show c.126+2650_126+2666delTTTTTTTTTTTTTTTTT	SNRPD3	ENSG00000100028.12	transcript	ENST00000215829.8	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr22	TogoVar
SNRPE_chr1_203856599_203876152	203861007	AGAGATAC others(10): Show AGAGATACACACTGGGAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02572.hp2 HG02976.hp2 others(6): Show HG01243.hp2 HG02572.hp2 HG02976.hp2 HG03041.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03540.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0043 a0001c0001t0001g0055 others(3): Show a0001c0001t0001g0021 a0001c0001t0001g0043 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0147	9	416	0.0216	-17	c.-65 others(26): Show c.-652_-636delGAGATACACACTGGGAC	SNRPE	ENSG00000182004.13	transcript	ENST00000414487.7	protein_coding		591		chr1	TogoVar
SNTB1_chr8_120530756_120817046	120571479	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 NA20300.hp1 HG00639.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0011 a0001c0001t0005 a0001c0001t0011	a0001c0001t0005g0207 a0001c0001t0011g0211 a0001c0001t0005g0207 a0001c0001t0011g0211	2	254	0.0079	-17	c.113 others(36): Show c.1136+3590_1136+3606delAAAAAAAAAAAAAAAAA	SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	4/6			chr8	TogoVar
SNTB2_chr16_69182164_69314052	69280528	CCGGGCGG others(10): Show CCGGGCGGGGGGCTCACA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02451.hp1 HG02572.hp1 others(5): Show HG01891.hp1 HG02451.hp1 HG02572.hp1 HG02615.hp2 HG02647.hp1 HG02895.hp1 HG02896.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0172 others(5): Show a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0199	8	218	0.0367	-17	c.114 others(36): Show c.1149-3518_1149-3502delGGGCGGGGGGCTCACAC	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69310070	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0081 a0001c0001t0003g0081	1	218	0.0046	-17	c.91 others(28): Show c.9147_*9163delTTTTTTTTTTTTTTTTT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding		1019		chr16	TogoVar
SNTG1_chr8_49906407_50801692	50462796	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0091 a0001c0001t0008g0091	1	106	0.0094	-17	c.363 others(36): Show c.363+12090_363+12106delTTTTTTTTTTTTTTTTT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG2_chr2_945849_1372613	950501	TGCCCCCC others(10): Show TGCCCCCCGCCCCCCTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG03453.hp1 HG03486.hp2 HG02451.hp1 HG03453.hp1 HG03486.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0007 a0001c0002 a0003c0007	a0001c0002t0002 a0003c0007t0002 a0001c0002t0002 a0003c0007t0002	a0001c0002t0002g0076 a0003c0007t0002g0075 a0003c0007t0002g0077 a0001c0002t0002g0076 a0003c0007t0002g0075 a0003c0007t0002g0077	3	190	0.0158	-17	c.-49 others(26): Show c.-495_-479delGCCCCCCGCCCCCCTCC	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding		347		chr2	TogoVar
SNTG2_chr2_945849_1372613	956154	GCCCCTGC others(10): Show GCCCCTGCCCTGCACCTA	G G	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0186 a0001c0002t0001g0186	1	190	0.0053	-17	c.72+ others(32): Show c.72+5116_72+5132delACCTACCCCTGCCCTGC	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	983168	AAGCAGAG others(10): Show AAGCAGAGGCTTTTTAGC	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0150 a0004c0004t0001g0150	1	190	0.0053	-17	c.72+ others(34): Show c.72+32103_72+32119delCAGAGGCTTTTTAGCAG	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1005803	CAAAATAT others(10): Show CAAAATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0093 a0002c0003t0001g0093	1	190	0.0053	-17	c.72+ others(34): Show c.72+54737_72+54753delAAATATATATATATATA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1149689	TTTTTTTT others(10): Show TTTTTTTTTTTTTTTTTC	T T	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02615.hp2 HG02630.hp2 others(1): Show HG02486.hp2 HG02615.hp2 HG02630.hp2 HG03486.hp2	a0003 a0006 a0018 a0003 a0006 a0018	a0003c0007 a0006c0009 a0018c0023 a0003c0007 a0006c0009 a0018c0023	a0003c0007t0001 a0003c0007t0002 a0006c0009t0001 others(1): Show a0003c0007t0001 a0003c0007t0002 a0006c0009t0001 a0018c0023t0001	a0003c0007t0001g0108 a0003c0007t0002g0077 a0006c0009t0001g0049 others(1): Show a0003c0007t0001g0108 a0003c0007t0002g0077 a0006c0009t0001g0049 a0018c0023t0001g0048	4	190	0.0211	-17	c.411 others(36): Show c.411+11881_411+11897delTTTTTTTTTTTTTTTTC	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	6/16			chr2	TogoVar
SNTG2_chr2_945849_1372613	1155424	GTGTACAC others(10): Show GTGTACACACACCACATA	G G	intron_variant intron_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0006 a0006	a0006c0010 a0006c0010	a0006c0010t0001 a0006c0010t0001	a0006c0010t0001g0162 a0006c0010t0001g0162	1	190	0.0053	-17	c.412 others(36): Show c.412-10112_412-10096delCACATATGTACACACAC	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	6/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNU13_chr22_41668933_41693867	41693384	TTTCCTGA others(10): Show TTTCCTGACTATTCTGTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18981.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	376	0.0027	-17	c.-46 others(28): Show c.-4605_-4589delGACAGAATAGTCAGGAA	SNU13	ENSG00000100138.15	transcript	ENST00000401959.6	protein_coding		4518		chr22	TogoVar
SNX16_chr8_81794583_81847185	81842534	GAAAACGA others(10): Show GAAAACGAGCGAGGGAGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0225 a0001c0001t0002g0225	1	306	0.0033	-17	c.-52 others(26): Show c.-526_-510delTCTCCCTCGCTCGTTTT	SNX16	ENSG00000104497.15	transcript	ENST00000345957.9	protein_coding		350		chr8	TogoVar
SNX18_chr5_54512759_54551586	54512816	TCTTTCCT others(10): Show TCTTTCCTTCCTTCCTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp2 HG01261.hp1 HG02280.hp1 others(8): Show HG01167.hp2 HG01261.hp1 HG02280.hp1 HG02486.hp1 HG02647.hp1 HG02717.hp2 HG02886.hp1 HG03041.hp1 HG03195.hp2 HG03516.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0006 a0001c0002 a0001c0006	a0001c0002t0001 a0001c0006t0001 a0001c0006t0008 a0001c0002t0001 a0001c0006t0001 a0001c0006t0008	a0001c0002t0001g0011 a0001c0002t0001g0046 a0001c0002t0001g0138 others(8): Show a0001c0002t0001g0011 a0001c0002t0001g0046 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0142 a0001c0002t0001g0143 a0001c0006t0001g0030 a0001c0006t0001g0048 a0001c0006t0008g0011	11	390	0.0282	-17	c.-51 others(28): Show c.-5136_-5120delCTTTCCTTCCTTCCTTC	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		4942		chr5	TogoVar
SNX18_chr5_54512759_54551586	54513956	TATATATA others(10): Show TATATATAAATTTATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00438.hp1 others(30): Show HG00280.hp1 HG00323.hp1 HG00438.hp1 HG00544.hp1 HG00639.hp2 HG00642.hp1 HG01074.hp2 HG01081.hp2 HG01169.hp1 HG01257.hp1 HG02027.hp1 HG02132.hp2 HG02155.hp1 HG02258.hp1 HG02717.hp1 HG02886.hp2 HG02965.hp1 HG03209.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp1 HG03834.hp1 HG04115.hp1 HG04228.hp2 NA18747.hp2 NA18947.hp1 NA18955.hp1 NA18962.hp2 NA18964.hp1 NA18982.hp1 NA18995.hp2 NA18999.hp1 NA20905.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 others(7): Show a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 a0001c0003t0005 a0001c0003t0006 a0001c0003t0007 a0001c0003t0014 a0001c0003t0033 a0001c0003t0042 a0001c0003t0047	a0001c0003t0001g0108 a0001c0003t0002g0111 a0001c0003t0004g0114 others(19): Show a0001c0003t0001g0108 a0001c0003t0002g0111 a0001c0003t0004g0114 a0001c0003t0005g0005 a0001c0003t0005g0010 a0001c0003t0005g0041 a0001c0003t0005g0106 a0001c0003t0005g0107 a0001c0003t0005g0112 a0001c0003t0005g0115 a0001c0003t0005g0117 a0001c0003t0006g0020 a0001c0003t0006g0110 a0001c0003t0007g0005 a0001c0003t0007g0042 a0001c0003t0007g0109 a0001c0003t0007g0113 a0001c0003t0007g0119 a0001c0003t0014g0020 a0001c0003t0033g0116 a0001c0003t0042g0005 a0001c0003t0047g0005	33	390	0.0846	-17	c.-39 others(28): Show c.-3996_-3980delATATATAAATTTATATA	SNX18	ENSG00000178996.14	transcript	ENST00000381410.5	protein_coding		3802		chr5	TogoVar
SNX24_chr5_122840613_123014205	122884981	CCATTTCA others(10): Show CCATTTCAGAAGCACGCT	C C	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0055 a0001c0001t0002g0055	1	330	0.0030	-17	c.60+ others(34): Show c.60+39289_60+39305delCATTTCAGAAGCACGCT	SNX24	ENSG00000064652.11	transcript	ENST00000261369.9	protein_coding	1/6			chr5	TogoVar
SNX25_chr4_185204598_185368966	185283599	ATTAACCT others(10): Show ATTAACCTATATTGTATT	A A	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0044	1	276	0.0036	-17	c.109 others(36): Show c.1092-4409_1092-4393delACCTATATTGTATTTTA	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	5/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX25_chr4_185204598_185368966	185351051	GTGTAATT others(10): Show GTGTAATTTGCAAAAATT	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03139.hp1 HG03486.hp1 others(1): Show HG02258.hp1 HG03139.hp1 HG03486.hp1 NA20129.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0004 a0003c0007 others(1): Show a0001c0001 a0003c0004 a0003c0007 a0006c0019	a0001c0001t0001 a0003c0004t0001 a0003c0007t0001 others(1): Show a0001c0001t0001 a0003c0004t0001 a0003c0007t0001 a0006c0019t0005	a0001c0001t0001g0208 a0003c0004t0001g0249 a0003c0007t0001g0189 others(1): Show a0001c0001t0001g0208 a0003c0004t0001g0249 a0003c0007t0001g0189 a0006c0019t0005g0267	4	276	0.0145	-17	c.230 others(34): Show c.2302-392_2302-376delGTAATTTGCAAAAATTT	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	13/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX27_chr1_151607050_151704080	151675810	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02132.hp1 HG02970.hp1 others(4): Show HG00408.hp1 HG02132.hp1 HG02970.hp1 NA18939.hp2 NA18949.hp2 NA18979.hp2 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0026 others(4): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0026 a0001c0001t0037 a0001c0001t0077 a0001c0001t0083 a0001c0001t0086	a0001c0001t0002g0033 a0001c0001t0008g0051 a0001c0001t0026g0133 others(4): Show a0001c0001t0002g0033 a0001c0001t0008g0051 a0001c0001t0026g0133 a0001c0001t0037g0045 a0001c0001t0077g0200 a0001c0001t0083g0126 a0001c0001t0086g0131	7	366	0.0191	-17	c.114 others(36): Show c.1149+7194_1149+7210delTTTTTTTTTTTTTTTTT	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX27_chr1_151607050_151704080	151676270	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp2 others(60): Show HG00099.hp1 HG00099.hp2 HG00323.hp2 HG00423.hp2 HG00639.hp2 HG00738.hp1 HG00741.hp1 HG01074.hp2 HG01099.hp2 HG01168.hp2 HG01256.hp2 HG01346.hp1 HG01516.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG02040.hp2 HG02071.hp1 HG02132.hp1 HG02273.hp2 HG02300.hp1 HG02602.hp2 HG02896.hp2 HG03041.hp2 HG03195.hp1 HG03209.hp2 HG03486.hp1 HG03579.hp1 HG03654.hp2 HG03688.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03942.hp1 HG04184.hp1 HG06807.hp2 NA18612.hp2 NA18943.hp1 NA18943.hp2 NA18947.hp1 NA18948.hp2 NA18949.hp2 NA18953.hp1 NA18960.hp1 NA18965.hp2 NA18966.hp1 NA18972.hp2 NA18973.hp1 NA18992.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19058.hp1 NA19060.hp2 NA19062.hp1 NA19064.hp2 NA19074.hp1 NA19080.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(38): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0021 a0001c0001t0022 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0031 a0001c0001t0035 a0001c0001t0041 a0001c0001t0044 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0064 a0001c0001t0072 a0001c0001t0075 a0001c0001t0079 a0001c0001t0084 a0001c0001t0087 a0001c0001t0116 a0001c0001t0118 a0001c0001t0133 a0001c0001t0145 a0001c0001t0146 a0001c0001t0152 a0001c0001t0157 a0001c0001t0159 a0001c0001t0161 a0001c0001t0168 a0001c0007t0001	a0001c0001t0001g0117 a0001c0001t0001g0125 a0001c0001t0002g0038 others(59): Show a0001c0001t0001g0117 a0001c0001t0001g0125 a0001c0001t0002g0038 a0001c0001t0003g0098 a0001c0001t0003g0116 a0001c0001t0003g0141 a0001c0001t0003g0145 a0001c0001t0003g0149 a0001c0001t0004g0167 a0001c0001t0004g0184 a0001c0001t0004g0317 a0001c0001t0005g0140 a0001c0001t0005g0148 a0001c0001t0005g0154 a0001c0001t0008g0025 a0001c0001t0008g0051 a0001c0001t0013g0182 a0001c0001t0015g0289 a0001c0001t0016g0168 a0001c0001t0016g0169 a0001c0001t0016g0181 a0001c0001t0017g0297 a0001c0001t0018g0292 a0001c0001t0018g0298 a0001c0001t0021g0143 a0001c0001t0021g0162 a0001c0001t0021g0163 a0001c0001t0022g0172 a0001c0001t0022g0320 a0001c0001t0026g0114 a0001c0001t0026g0133 a0001c0001t0026g0137 a0001c0001t0027g0347 a0001c0001t0028g0144 a0001c0001t0028g0319 a0001c0001t0031g0305 a0001c0001t0035g0021 a0001c0001t0041g0161 a0001c0001t0041g0345 a0001c0001t0044g0160 a0001c0001t0044g0302 a0001c0001t0055g0115 a0001c0001t0056g0173 a0001c0001t0057g0314 a0001c0001t0058g0004 a0001c0001t0064g0026 a0001c0001t0072g0349 a0001c0001t0075g0165 a0001c0001t0079g0155 a0001c0001t0084g0138 a0001c0001t0087g0179 a0001c0001t0116g0327 a0001c0001t0118g0311 a0001c0001t0133g0313 a0001c0001t0145g0018 a0001c0001t0146g0078 a0001c0001t0152g0019 a0001c0001t0157g0050 a0001c0001t0159g0069 a0001c0001t0161g0054 a0001c0001t0168g0037 a0001c0007t0001g0134	63	366	0.1721	-17	c.115 others(36): Show c.1150-7049_1150-7033delTTTTTTTTTTTTTTTTT	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX29_chr16_11971734_12579287	12013501	ATATATAT others(10): Show ATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02922.hp1 HG02615.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0002t0091 a0001c0001t0007 a0001c0002t0091	a0001c0001t0007g0008 a0001c0002t0091g0011 a0001c0001t0007g0008 a0001c0002t0091g0011	2	176	0.0114	-17	c.122 others(36): Show c.122+10459_122+10475delTATATATATATATATAT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	3/20			chr16	TogoVar
SNX29_chr16_11971734_12579287	12476370	AAAAAAAA others(10): Show AAAAAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	176	0.0057	-17	c.203 others(36): Show c.2038-1347_2038-1331delAAAAAAAAAAAAATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12575846	TTGTTTTT others(10): Show TTGTTTTTTTTGTTTTTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0086 a0001c0002t0086	a0001c0002t0086g0066 a0001c0002t0086g0066	1	176	0.0057	-17	c.72 others(28): Show c.7218_*7234delTGTTTTTTTTGTTTTTG	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding		1560		chr16	TogoVar
SNX30_chr9_112745760_112879987	112775543	TGTGTGTG others(10): Show TGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02129.hp1 NA19002.hp2 NA19088.hp1 others(1): Show HG02129.hp1 NA19002.hp2 NA19088.hp1 NA19091.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0004 a0002c0003t0002 a0002c0003t0004	a0002c0003t0002g0009 a0002c0003t0004g0010 a0002c0003t0004g0011 others(1): Show a0002c0003t0002g0009 a0002c0003t0004g0010 a0002c0003t0004g0011 a0002c0003t0004g0024	4	338	0.0118	-17	c.156 others(36): Show c.156+24387_156+24403delGTGTGTGTGTGTGTGTG	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	1/8			chr9	TogoVar
SNX5_chr20_17936600_17973794	17956688	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01261.hp2 NA18939.hp1 others(13): Show HG00423.hp1 HG01261.hp2 NA18939.hp1 NA18941.hp2 NA18945.hp1 NA18947.hp1 NA18953.hp1 NA18960.hp2 NA18974.hp1 NA18985.hp1 NA19000.hp2 NA19002.hp1 NA19006.hp2 NA19081.hp2 NA19089.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0028 a0001c0001t0001g0071 others(4): Show a0001c0001t0001g0003 a0001c0001t0001g0028 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075	16	394	0.0406	-17	c.156 others(32): Show c.156+228_156+244delGTTTTTTTTTTTTTTTT	SNX5	ENSG00000089006.17	transcript	ENST00000377759.9	protein_coding	2/12			chr20	TogoVar
SNX7_chr1_98656721_98765500	98663252	GGTTTTTT others(10): Show GGTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03225.hp2 HG02717.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0113 a0001c0004t0001g0114 a0001c0001t0001g0113 a0001c0004t0001g0114	2	378	0.0053	-17	c.180 others(34): Show c.180+1342_180+1358delGTTTTTTTTTTTTTTTT	SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding	1/8			chr1	TogoVar
SNX8_chr7_2246770_2319441	2317251	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp2 NA18988.hp1 HG01515.hp2 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0004 a0001c0001t0001 a0001c0002t0004	a0001c0001t0001g0269 a0001c0002t0004g0284 a0001c0001t0001g0269 a0001c0002t0004g0284	2	370	0.0054	-17	c.-28 others(28): Show c.-2847_-2831delAAAAAAAAAAAAAAAAA	SNX8	ENSG00000106266.11	transcript	ENST00000222990.8	protein_coding		2811		chr7	TogoVar
SOAT1_chr1_179288797_179363680	179295966	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG06807.hp1 NA18966.hp1 HG06807.hp1 NA18966.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0009 a0001c0001t0006 a0001c0002t0009	a0001c0001t0006g0011 a0001c0002t0009g0148 a0001c0001t0006g0011 a0001c0002t0009g0148	2	382	0.0052	-17	c.-9+ others(32): Show c.-9+2049_-9+2065delTTTTTTTTTTTTTTTTT	SOAT1	ENSG00000057252.13	transcript	ENST00000367619.8	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr1	TogoVar

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