view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CNOT6_chr5_180489379_180583358 | 180510134 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | NA18966.hp1 NA18969.hp2 |
a0002 | a0002c0004 | a0002c0004t0001a0002c0004t0004 | a0002c0004t0001g0318 a0002c0004t0004g0249 |
2 | 52 | 0.0385 | -17 | c.-3+ others(34): Show |
CNOT6 | ENSG00000113300.13 | transcript | ENST00000261951.9 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
CNPY4_chr7_100114634_100130508 | 100121116 | ATTTTTTT others(10): Show |
A | intron_variant | MODIFIER | HG03669.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0042 | 1 | 251 | 0.0040 | -17 | c.119 others(34): Show |
CNPY4 | ENSG00000166997.8 | transcript | ENST00000262932.5 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNST_chr1_246561456_246673595 | 246585663 | ATATACAC others(10): Show |
A | intron_variant | MODIFIER | HG00735.hp1 NA18522.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0013 a0001c0001t0001g0175 |
2 | 309 | 0.0065 | -17 | c.-51 others(34): Show |
CNST | ENSG00000162852.14 | transcript | ENST00000366513.9 | protein_coding | 1/10 | chr1 | TogoVar | |||||||
CNST_chr1_246561456_246673595 | 246658709 | GGCCAGCA others(10): Show |
G | intron_variant | MODIFIER | HG02451.hp2 HG02630.hp2 HG02818.hp2 others(4): Show |
a0003a0004 | a0003c0003a0004c0004 | a0003c0003t0001a0004c0004t0003a0004c0004t0021 | a0003c0003t0001g0039 a0004c0004t0003g0117 a0004c0004t0003g0182 others(4): Show |
7 | 318 | 0.0220 | -17 | c.183 others(36): Show |
CNST | ENSG00000162852.14 | transcript | ENST00000366513.9 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CNTLN_chr9_17130040_17508923 | 17443681 | ATATACCT others(10): Show |
A | intron_variant | MODIFIER | HG02615.hp2 HG02895.hp1 HG02896.hp2 others(3): Show |
a0004a0008a0011 | a0004c0020a0008c0010a0011c0015 | a0004c0020t0005a0008c0010t0002a0008c0010t0004others(1): Show | a0004c0020t0005g0145 a0008c0010t0002g0206 a0008c0010t0004g0207 others(3): Show |
6 | 216 | 0.0278 | -17 | c.311 others(38): Show |
CNTLN | ENSG00000044459.15 | transcript | ENST00000380647.8 | protein_coding | 18/25 | chr9 | TogoVar | |||||||
CNTN1_chr12_40687439_41077415 | 40795303 | ACACACAC others(10): Show |
A | intron_variant | MODIFIER | HG01109.hp1 NA18943.hp2 NA19091.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001a0001c0002t0027 | a0001c0001t0001g0159 a0001c0002t0001g0136 a0001c0002t0027g0041 |
3 | 230 | 0.0130 | -17 | c.-77 others(38): Show |
CNTN1 | ENSG00000018236.15 | transcript | ENST00000551295.7 | protein_coding | 1/23 | chr12 | TogoVar | |||||||
CNTN3_chr3_74257568_74619659 | 74344397 | GTTTTTTT others(10): Show |
G | intron_variant | MODIFIER | HG02055.hp2 HG02257.hp1 HG02258.hp1 others(8): Show |
a0001a0003a0008 | a0001c0001a0001c0002a0001c0009others(2): Show | a0001c0001t0008a0001c0002t0002a0001c0002t0007others(5): Show | a0001c0001t0008g0001 a0001c0001t0008g0003 a0001c0002t0002g0020 others(8): Show |
11 | 133 | 0.0827 | -17 | c.136 others(36): Show |
CNTN3 | ENSG00000113805.9 | transcript | ENST00000263665.7 | protein_coding | 11/22 | chr3 | TogoVar | |||||||
CNTN4_chr3_2093866_3062959 | 2520259 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG00639.hp1 HG00642.hp2 HG01175.hp1 others(3): Show |
a0001 | a0001c0003a0001c0004a0001c0010 | a0001c0003t0001a0001c0003t0002a0001c0003t0006others(2): Show | a0001c0003t0001g0045 a0001c0003t0001g0116 a0001c0003t0002g0107 others(3): Show |
6 | 43 | 0.1395 | -17 | c.-88 others(36): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN4_chr3_2093866_3062959 | 2570036 | TGGCGGGC others(10): Show |
T | intron_variant | MODIFIER | NA18906.hp2 | a0009 | a0009c0012 | a0009c0012t0009 | a0009c0012t0009g0093 | 1 | 116 | 0.0086 | -17 | c.-88 others(34): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN4_chr3_2093866_3062959 | 2600005 | CTTCTTTT others(10): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG02486.hp1 HG02683.hp2 |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0003a0001c0002t0002a0001c0003t0001 | a0001c0001t0003g0008 a0001c0002t0002g0102 a0001c0003t0001g0094 |
3 | 93 | 0.0323 | -17 | c.55+ others(34): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 4/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN4_chr3_2093866_3062959 | 2671905 | AAACAGCA others(10): Show |
A | intron_variant | MODIFIER | HG00738.hp2 HG01243.hp2 HG01884.hp2 others(35): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(24): Show | a0001c0001t0002g0086 a0001c0001t0003g0008 a0001c0001t0003g0101 others(35): Show |
38 | 116 | 0.3276 | -17 | c.56- others(34): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 4/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN4_chr3_2093866_3062959 | 2983213 | CAAAAAAA others(10): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG03486.hp2 |
a0001 | a0001c0001a0001c0024 | a0001c0001t0009a0001c0024t0015 | a0001c0001t0009g0052 a0001c0024t0015g0057 |
2 | 3 | 0.6667 | -17 | c.135 others(36): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 13/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN6_chr3_1088024_1409217 | 1386684 | CTTTTTAA others(10): Show |
C | intron_variant | MODIFIER | HG02809.hp1 HG02896.hp1 NA19030.hp1 |
a0001 | a0001c0009a0001c0010 | a0001c0009t0001a0001c0010t0001 | a0001c0009t0001g0155 a0001c0010t0001g0010 a0001c0010t0001g0207 |
3 | 230 | 0.0130 | -17 | c.270 others(34): Show |
CNTN6 | ENSG00000134115.13 | transcript | ENST00000446702.7 | protein_coding | 20/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146285834 | GCTCCCTT others(10): Show |
G | intron_variant | MODIFIER | NA19030.hp2 | a0002 | a0002c0016 | a0002c0016t0004 | a0002c0016t0004g0024 | 1 | 40 | 0.0250 | -17 | c.97+ others(36): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146285869 | CTCCCTTC others(10): Show |
C | intron_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0021 | 1 | 40 | 0.0250 | -17 | c.97+ others(36): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146380784 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG02896.hp2 HG02897.hp2 |
a0001 | a0001c0004 | a0001c0004t0003 | a0001c0004t0003g0035 a0001c0004t0003g0036 |
2 | 4 | 0.5000 | -17 | c.97+ others(36): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 148331240 | AACAGATG others(10): Show |
A | intron_variant | MODIFIER | HG00735.hp2 HG02451.hp1 HG02486.hp2 others(24): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(12): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0018others(20): Show | a0001c0001t0001g0003 a0001c0001t0001g0038 a0001c0001t0012g0034 others(24): Show |
27 | 40 | 0.6750 | -17 | c.347 others(38): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 21/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 148402172 | ACTGGATC others(10): Show |
A | intron_variant | MODIFIER | HG03139.hp2 HG03239.hp1 HG03239.hp2 others(1): Show |
a0001a0005 | a0001c0002a0001c0010a0001c0011others(1): Show | a0001c0002t0002a0001c0010t0002a0001c0011t0016others(1): Show | a0001c0002t0002g0040 a0001c0010t0002g0014 a0001c0011t0016g0019 others(1): Show |
4 | 40 | 0.1000 | -17 | c.371 others(36): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 22/23 | chr7 | TogoVar | |||||||
CNTNAP4_chr16_76272401_76565757 | 76473844 | TTTTTTTG others(10): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(140): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0004a0001c0015others(22): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 others(140): Show |
143 | 272 | 0.5257 | -17 | c.165 others(36): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124702346 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0012 | 1 | 3 | 0.3333 | -17 | c.207 others(38): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 13/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124855167 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG01891.hp2 HG02451.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(6): Show | a0001c0001t0001g0011 a0001c0001t0003g0006 a0001c0001t0003g0057 others(9): Show |
12 | 24 | 0.5000 | -17 | c.321 others(38): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 19/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTRL_chr9_121069955_121182610 | 121092516 | ATATATAT others(10): Show |
A | intron_variant | MODIFIER | HG01257.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0060 | 1 | 323 | 0.0031 | -17 | c.348 others(34): Show |
CNTRL | ENSG00000119397.19 | transcript | ENST00000373855.7 | protein_coding | 4/43 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
CNTRL_chr9_121069955_121182610 | 121092535 | ATATATAT others(10): Show |
A | intron_variant | MODIFIER | HG02451.hp1 HG02717.hp2 HG02886.hp2 others(1): Show |
a0004 | a0004c0007 | a0004c0007t0001 | a0004c0007t0001g0013 a0004c0007t0001g0137 a0004c0007t0001g0140 |
4 | 322 | 0.0124 | -17 | c.348 others(34): Show |
CNTRL | ENSG00000119397.19 | transcript | ENST00000373855.7 | protein_coding | 4/43 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
COA1_chr7_43634257_43734523 | 43644715 | TAGATAGA others(10): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00423.hp1 others(126): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0006a0002c0003t0001 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0024 others(124): Show |
129 | 365 | 0.3534 | -17 | c.264 others(32): Show |
COA1 | ENSG00000106603.20 | transcript | ENST00000223336.11 | protein_coding | 4/5 | chr7 | TogoVar | |||||||
COBLL1_chr2_164675188_164846823 | 164822726 | ATTATATT others(10): Show |
A | intron_variant | MODIFIER | HG00733.hp1 HG00741.hp1 HG00741.hp2 others(26): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0010others(5): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(15): Show | a0001c0001t0001g0075 a0001c0001t0005g0193 a0001c0001t0005g0194 others(26): Show |
29 | 192 | 0.1510 | -17 | c.41+ others(34): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51018904 | AAATATAT others(10): Show |
A | intron_variant | MODIFIER | HG03041.hp1 | a0002 | a0002c0004 | a0002c0004t0007 | a0002c0004t0007g0046 | 1 | 225 | 0.0044 | -17 | c.376 others(36): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 12/12 | chr7 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51018906 | ATATATAT others(10): Show |
A | intron_variant | MODIFIER | NA19043.hp1 | a0001 | a0001c0010 | a0001c0010t0012 | a0001c0010t0012g0114 | 1 | 188 | 0.0053 | -17 | c.376 others(36): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 12/12 | chr7 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51036336 | CAAAAAAA others(10): Show |
C | intron_variant | MODIFIER | HG01934.hp1 | a0009 | a0009c0017 | a0009c0017t0001 | a0009c0017t0001g0150 | 1 | 37 | 0.0270 | -17 | c.140 others(36): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 8/12 | chr7 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51182980 | GGGCTACA others(10): Show |
G | intron_variant | MODIFIER | NA18522.hp2 | a0001 | a0001c0020 | a0001c0020t0001 | a0001c0020t0001g0167 | 1 | 228 | 0.0044 | -17 | c.783 others(34): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 5/12 | chr7 | TogoVar | |||||||
COG6_chr13_39650662_39757628 | 39654167 | ATTTAGCT others(10): Show |
A | upstream_gene_variant | MODIFIER | HG06807.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0027 | 1 | 368 | 0.0027 | -17 | c.-15 others(28): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 1494 | chr13 | TogoVar | |||||||
COG6_chr13_39650662_39757628 | 39666577 | CACTGATC others(10): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(78): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0011others(2): Show | a0001c0001t0003a0001c0001t0004a0001c0006t0003others(5): Show | a0001c0001t0003g0002 a0001c0001t0003g0003 a0001c0001t0003g0004 others(74): Show |
81 | 368 | 0.2201 | -17 | c.428 others(34): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 4/18 | chr13 | TogoVar | |||||||
COL13A1_chr10_69796906_69964144 | 69804809 | CAAAAAAA others(10): Show |
C | intron_variant | MODIFIER | NA18994.hp2 NA20905.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0001 | a0001c0001t0002g0075 a0001c0002t0001g0205 |
2 | 4 | 0.5000 | -17 | c.294 others(34): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69936161 | GAAGGAAG others(10): Show |
G | intron_variant | MODIFIER | HG00558.hp1 HG00609.hp2 HG00673.hp1 others(65): Show |
a0001a0003a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(19): Show | a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0021 others(65): Show |
68 | 322 | 0.2112 | -17 | c.177 others(34): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 32/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69936170 | AAGGAAGG others(10): Show |
A | intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0243 | 1 | 322 | 0.0031 | -17 | c.177 others(34): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 32/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45405058 | CCCCGCGC others(10): Show |
C | upstream_gene_variant | MODIFIER | HG06807.hp2 | a0003 | a0003c0057 | a0003c0057t0002 | a0003c0057t0002g0028 | 1 | 290 | 0.0034 | -17 | c.-17 others(26): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 106 | chr21 | TogoVar | |||||||
COL18A1_chr21_45400165_45518720 | 45490052 | CCCCCACT others(10): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG01167.hp1 HG02280.hp2 others(6): Show |
a0002a0014a0027 | a0002c0012a0002c0064a0002c0080others(4): Show | a0002c0012t0004a0002c0064t0001a0002c0080t0001others(4): Show | a0002c0012t0004g0039 a0002c0012t0004g0180 a0002c0012t0004g0188 others(6): Show |
9 | 238 | 0.0378 | -17 | c.196 others(34): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 19/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45490057 | ACTCCCCC others(10): Show |
A | intron_variant | MODIFIER | HG02135.hp2 | a0001 | a0001c0061 | a0001c0061t0001 | a0001c0061t0001g0032 | 1 | 282 | 0.0035 | -17 | c.196 others(34): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 19/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL18A1_chr21_45400165_45518720 | 45490082 | CGACTCCC others(10): Show |
C | intron_variant | MODIFIER | HG00323.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0080 | 1 | 282 | 0.0035 | -17 | c.196 others(34): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 19/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178362983 | ACCCCCAC others(10): Show |
A | intron_variant | MODIFIER | NA18955.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0147 | 1 | 236 | 0.0042 | -17 | c.362 others(36): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178368651 | TGGCCTCC others(10): Show |
T | intron_variant | MODIFIER | HG02622.hp2 HG02647.hp1 HG03516.hp2 |
a0001a0002a0003 | a0001c0005a0002c0003a0003c0004 | a0001c0005t0001a0002c0003t0001a0003c0004t0003 | a0001c0005t0001g0007 a0002c0003t0001g0152 a0003c0004t0003g0010 |
3 | 236 | 0.0127 | -17 | c.362 others(36): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178368669 | GGCCTCCA others(10): Show |
G | intron_variant | MODIFIER | HG02451.hp2 | a0004 | a0004c0006 | a0004c0006t0003 | a0004c0006t0003g0062 | 1 | 236 | 0.0042 | -17 | c.362 others(36): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178420441 | TCCTCCTC others(10): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG04199.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0004a0002c0003t0002 | a0001c0001t0004g0174 a0002c0003t0002g0112 |
2 | 236 | 0.0085 | -17 | c.362 others(38): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL24A1_chr1_85724233_86161772 | 86097505 | TCCTCCTC others(10): Show |
T | intron_variant | MODIFIER | HG00642.hp2 HG01071.hp1 HG01074.hp1 others(68): Show |
a0001a0002a0003others(22): Show | a0001c0001a0001c0005a0002c0007others(30): Show | a0001c0001t0001a0001c0005t0002a0002c0007t0002others(39): Show | a0001c0001t0001g0175 a0001c0005t0002g0170 a0001c0005t0002g0187 others(68): Show |
71 | 228 | 0.3114 | -17 | c.160 others(36): Show |
COL24A1 | ENSG00000171502.15 | transcript | ENST00000370571.7 | protein_coding | 5/59 | chr1 | TogoVar | |||||||
COL25A1_chr4_108803725_109307658 | 108990234 | AAAAAAAT others(10): Show |
A | intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0047 | 1 | 125 | 0.0080 | -17 | c.439 others(36): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 6/37 | chr4 | TogoVar | |||||||
COL26A1_chr7_101357875_101564024 | 101388869 | TTTTTCTT others(10): Show |
T | intron_variant | MODIFIER | NA19043.hp2 | a0001 | a0001c0005 | a0001c0005t0008 | a0001c0005t0008g0088 | 1 | 172 | 0.0058 | -17 | c.158 others(36): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 1/12 | chr7 | TogoVar | |||||||
COL26A1_chr7_101357875_101564024 | 101463890 | TTTCTTTC others(10): Show |
T | intron_variant | MODIFIER | HG02647.hp1 | a0001 | a0001c0002 | a0001c0002t0020 | a0001c0002t0020g0001 | 1 | 172 | 0.0058 | -17 | c.385 others(36): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
COL28A1_chr7_7352875_7540873 | 7442862 | CCATCTCT others(10): Show |
C | intron_variant | MODIFIER | HG02486.hp1 HG02886.hp1 HG02886.hp2 others(4): Show |
a0003a0007a0024 | a0003c0047a0007c0010a0007c0044others(1): Show | a0003c0047t0001a0007c0010t0001a0007c0010t0002others(2): Show | a0003c0047t0001g0045 a0007c0010t0001g0044 a0007c0010t0002g0043 others(4): Show |
7 | 194 | 0.0361 | -17 | c.165 others(34): Show |
COL28A1 | ENSG00000215018.10 | transcript | ENST00000399429.8 | protein_coding | 20/34 | chr7 | TogoVar | |||||||
COL3A1_chr2_188969373_189017746 | 188997012 | TATATATA others(10): Show |
T | intron_variant | MODIFIER | NA18747.hp1 NA18954.hp2 NA19000.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072 a0001c0001t0001g0163 a0001c0001t0001g0164 |
3 | 374 | 0.0080 | -17 | c.176 others(34): Show |
COL3A1 | ENSG00000168542.17 | transcript | ENST00000304636.9 | protein_coding | 24/50 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COL4A1_chr13_110143963_110312157 | 110230320 | ATGTGCAT others(10): Show |
A | intron_variant | MODIFIER | NA18953.hp1 NA18957.hp2 |
a0002a0006 | a0002c0024a0006c0042 | a0002c0024t0002a0006c0042t0002 | a0002c0024t0002g0275 a0006c0042t0002g0276 |
2 | 342 | 0.0058 | -17 | c.144 others(36): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 2/51 | chr13 | TogoVar | |||||||
COL4A1_chr13_110143963_110312157 | 110253310 | ATTACATA others(10): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG02145.hp2 others(15): Show |
a0001a0002a0003others(1): Show | a0001c0007a0001c0010a0001c0013others(13): Show | a0001c0007t0001a0001c0010t0001a0001c0013t0001others(13): Show | a0001c0007t0001g0048 a0001c0010t0001g0148 a0001c0013t0001g0052 others(14): Show |
18 | 342 | 0.0526 | -17 | c.85- others(34): Show |
COL4A1 | ENSG00000187498.16 | transcript | ENST00000375820.10 | protein_coding | 1/51 | chr13 | TogoVar |