view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LAMA2_chr6_128878138_129521566 | 129274120 | CTTTTACA others(10): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(82): Show |
a0001a0002a0003others(30): Show | a0001c0001a0001c0011a0001c0012others(65): Show | a0001c0001t0001a0001c0011t0001a0001c0011t0002others(70): Show | a0001c0001t0001g0001 a0001c0001t0001g0052 a0001c0001t0001g0056 others(82): Show |
85 | 88 | 0.9659 | -17 | c.245 others(36): Show |
LAMA2 | ENSG00000196569.14 | transcript | ENST00000421865.3 | protein_coding | 17/64 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
LAMA2_chr6_128878138_129521566 | 129298807 | ATGATAAG others(10): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00609.hp2 others(9): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0012a0002c0054others(8): Show | a0001c0001t0001a0001c0012t0001a0002c0054t0004others(8): Show | a0001c0001t0001g0070 a0001c0001t0001g0087 a0001c0012t0001g0074 others(9): Show |
12 | 88 | 0.1364 | -17 | c.303 others(34): Show |
LAMA2 | ENSG00000196569.14 | transcript | ENST00000421865.3 | protein_coding | 21/64 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
LAMA2_chr6_128878138_129521566 | 129520373 | TAAAAAAA others(10): Show |
T | downstream_gene_variant | MODIFIER | HG03195.hp1 | a0002 | a0002c0003 | a0002c0003t0005 | a0002c0003t0005g0010 | 1 | 88 | 0.0114 | -17 | c.*40 others(28): Show |
LAMA2 | ENSG00000196569.14 | transcript | ENST00000421865.3 | protein_coding | 3808 | chr6 | TogoVar | |||||||
LAMA3_chr18_23684453_23960066 | 23695796 | CAAAAAAA others(10): Show |
C | intron_variant | MODIFIER | HG02922.hp2 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0232 | 1 | 280 | 0.0036 | -17 | c.294 others(34): Show |
LAMA3 | ENSG00000053747.17 | transcript | ENST00000313654.14 | protein_coding | 1/74 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
LAMA5_chr20_62304065_62372312 | 62315290 | GCAACAGG others(10): Show |
G | intron_variant | MODIFIER | HG01175.hp2 | a0041 | a0041c0120 | a0041c0120t0002 | a0041c0120t0002g0089 | 1 | 186 | 0.0054 | -17 | c.786 others(33): Show |
LAMA5 | ENSG00000130702.15 | transcript | ENST00000252999.7 | protein_coding | 58/79 | chr20 | TogoVar | |||||||
LAMA5_chr20_62304065_62372312 | 62316231 | TAGCCTCT others(10): Show |
T | intron_variant | MODIFIER | HG02886.hp2 HG02922.hp2 HG02976.hp1 |
a0021a0082 | a0021c0047a0021c0078a0082c0060 | a0021c0047t0001a0021c0078t0001a0082c0060t0001 | a0021c0047t0001g0058 a0021c0078t0001g0018 a0082c0060t0001g0051 |
3 | 186 | 0.0161 | -17 | c.775 others(34): Show |
LAMA5 | ENSG00000130702.15 | transcript | ENST00000252999.7 | protein_coding | 57/79 | chr20 | TogoVar | |||||||
LAMA5_chr20_62304065_62372312 | 62321388 | GTCAGAGG others(10): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp2 HG00733.hp2 others(56): Show |
a0001a0003a0004others(34): Show | a0001c0007a0001c0008a0001c0013others(42): Show | a0001c0007t0001a0001c0008t0001a0001c0008t0002others(43): Show | a0001c0007t0001g0121 a0001c0007t0001g0127 a0001c0007t0001g0141 others(56): Show |
59 | 186 | 0.3172 | -17 | c.649 others(34): Show |
LAMA5 | ENSG00000130702.15 | transcript | ENST00000252999.7 | protein_coding | 48/79 | chr20 | TogoVar | |||||||
LAMA5_chr20_62304065_62372312 | 62321428 | GGAGGGGT others(10): Show |
G | intron_variant | MODIFIER | HG01243.hp1 NA18522.hp1 |
a0044a0104 | a0044c0049a0104c0026 | a0044c0049t0001a0104c0026t0001 | a0044c0049t0001g0060 a0104c0026t0001g0180 |
2 | 186 | 0.0108 | -17 | c.649 others(34): Show |
LAMA5 | ENSG00000130702.15 | transcript | ENST00000252999.7 | protein_coding | 48/79 | chr20 | TogoVar | |||||||
LAMA5_chr20_62304065_62372312 | 62321714 | AGAGGGGT others(10): Show |
A | intron_variant | MODIFIER | HG02109.hp1 HG02647.hp1 HG02976.hp2 others(1): Show |
a0017a0085a0092 | a0017c0139a0017c0148a0085c0140others(1): Show | a0017c0139t0001a0017c0148t0001a0085c0140t0001others(1): Show | a0017c0139t0001g0065 a0017c0148t0001g0064 a0085c0140t0001g0066 others(1): Show |
4 | 186 | 0.0215 | -17 | c.649 others(34): Show |
LAMA5 | ENSG00000130702.15 | transcript | ENST00000252999.7 | protein_coding | 48/79 | chr20 | TogoVar | |||||||
LAMA5_chr20_62304065_62372312 | 62321726 | TCAGTGGA others(10): Show |
T | intron_variant | MODIFIER | HG02647.hp2 | a0076 | a0076c0076 | a0076c0076t0001 | a0076c0076t0001g0016 | 1 | 186 | 0.0054 | -17 | c.649 others(34): Show |
LAMA5 | ENSG00000130702.15 | transcript | ENST00000252999.7 | protein_coding | 48/79 | chr20 | TogoVar | |||||||
LAMB4_chr7_108018553_108135361 | 108043545 | GTTTTTTT others(10): Show |
G | intron_variant | MODIFIER | HG01169.hp2 HG01258.hp2 HG02523.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001a0001c0002t0003 | a0001c0001t0001g0169 a0001c0001t0001g0191 a0001c0001t0001g0197 others(4): Show |
7 | 292 | 0.0240 | -17 | c.447 others(34): Show |
LAMB4 | ENSG00000091128.13 | transcript | ENST00000388781.8 | protein_coding | 29/33 | chr7 | TogoVar | |||||||
LAMB4_chr7_108018553_108135361 | 108084994 | CTCCCAAA others(10): Show |
C | intron_variant | MODIFIER | HG01167.hp1 | a0025 | a0025c0062 | a0025c0062t0001 | a0025c0062t0001g0189 | 1 | 292 | 0.0034 | -17 | c.170 others(36): Show |
LAMB4 | ENSG00000091128.13 | transcript | ENST00000388781.8 | protein_coding | 14/33 | chr7 | TogoVar | |||||||
LAMC1_chr1_183018420_183150592 | 183079232 | GTTTTTTT others(10): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00597.hp2 HG00639.hp2 others(44): Show |
a0001a0016 | a0001c0003a0001c0005a0001c0040others(3): Show | a0001c0003t0002a0001c0003t0003a0001c0003t0006others(9): Show | a0001c0003t0002g0265 a0001c0003t0002g0269 a0001c0003t0002g0270 others(42): Show |
47 | 308 | 0.1526 | -17 | c.419 others(36): Show |
LAMC1 | ENSG00000135862.6 | transcript | ENST00000258341.5 | protein_coding | 1/27 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LAMP1_chr13_113292239_113328672 | 113301637 | AAAAAAAA others(10): Show |
A | intron_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0068 | 1 | 354 | 0.0028 | -17 | c.61+ others(32): Show |
LAMP1 | ENSG00000185896.11 | transcript | ENST00000332556.5 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
LAMP1_chr13_113292239_113328672 | 113301639 | AAAAAAAT others(10): Show |
A | intron_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0044 | 1 | 354 | 0.0028 | -17 | c.61+ others(32): Show |
LAMP1 | ENSG00000185896.11 | transcript | ENST00000332556.5 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
LAMP1_chr13_113292239_113328672 | 113301641 | AAAAATAT others(10): Show |
A | intron_variant | MODIFIER | HG02809.hp1 | a0004 | a0004c0004 | a0004c0004t0004 | a0004c0004t0004g0046 | 1 | 354 | 0.0028 | -17 | c.61+ others(32): Show |
LAMP1 | ENSG00000185896.11 | transcript | ENST00000332556.5 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
LAMP3_chr3_183117215_183167734 | 183149563 | AAAAAAAA others(10): Show |
A | intron_variant | MODIFIER | HG00280.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0263 | 1 | 372 | 0.0027 | -17 | c.888 others(34): Show |
LAMP3 | ENSG00000078081.8 | transcript | ENST00000265598.8 | protein_coding | 3/5 | chr3 | TogoVar | |||||||
LAPTM4B_chr8_97770788_97858013 | 97771513 | CAAAAAAA others(10): Show |
C | upstream_gene_variant | MODIFIER | HG01243.hp2 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0370 | 1 | 380 | 0.0026 | -17 | c.-44 others(28): Show |
LAPTM4B | ENSG00000104341.17 | transcript | ENST00000521545.7 | protein_coding | 4274 | chr8 | TogoVar | |||||||
LARGE1_chr22_33267509_33925476 | 33302931 | ATATATGC others(10): Show |
A | intron_variant | MODIFIER | HG00741.hp2 | a0001 | a0001c0014 | a0001c0014t0012 | a0001c0014t0012g0086 | 1 | 110 | 0.0091 | -17 | c.173 others(36): Show |
LARGE1 | ENSG00000133424.22 | transcript | ENST00000397394.8 | protein_coding | 12/14 | chr22 | TogoVar | |||||||
LARGE1_chr22_33267509_33925476 | 33676372 | CAAAAAAA others(10): Show |
C | intron_variant | MODIFIER | HG02257.hp2 | a0004 | a0004c0020 | a0004c0020t0010 | a0004c0020t0010g0008 | 1 | 110 | 0.0091 | -17 | c.107 others(36): Show |
LARGE1 | ENSG00000133424.22 | transcript | ENST00000397394.8 | protein_coding | 2/14 | chr22 | TogoVar | |||||||
LARGE1_chr22_33267509_33925476 | 33795553 | ATGCGCAC others(10): Show |
A | intron_variant | MODIFIER | HG02451.hp2 | a0001 | a0001c0001 | a0001c0001t0014 | a0001c0001t0014g0075 | 1 | 110 | 0.0091 | -17 | c.-82 others(36): Show |
LARGE1 | ENSG00000133424.22 | transcript | ENST00000397394.8 | protein_coding | 1/14 | chr22 | TogoVar | |||||||
LARGE1_chr22_33267509_33925476 | 33852871 | AAAAAAAA others(10): Show |
A | intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072 | 1 | 110 | 0.0091 | -17 | c.-83 others(36): Show |
LARGE1 | ENSG00000133424.22 | transcript | ENST00000397394.8 | protein_coding | 1/14 | chr22 | TogoVar | |||||||
LARP1B_chr4_128056312_128216988 | 128073572 | GTTTTTTT others(10): Show |
G | intron_variant | MODIFIER | HG02486.hp1 HG02622.hp2 HG03225.hp2 |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0131 a0001c0001t0007g0132 a0001c0001t0007g0133 |
3 | 336 | 0.0089 | -17 | c.-77 others(32): Show |
LARP1B | ENSG00000138709.20 | transcript | ENST00000326639.11 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
LARP1B_chr4_128056312_128216988 | 128129164 | CAAAAAAA others(10): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00544.hp2 HG00673.hp1 others(13): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0007 | a0001c0001t0001a0001c0001t0003a0002c0002t0002others(1): Show | a0001c0001t0001g0149 a0001c0001t0001g0173 a0001c0001t0001g0176 others(13): Show |
16 | 336 | 0.0476 | -17 | c.152 others(36): Show |
LARP1B | ENSG00000138709.20 | transcript | ENST00000326639.11 | protein_coding | 11/19 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
LARP1_chr5_154750377_154822605 | 154757832 | TCCCCCCT others(10): Show |
T | intron_variant | MODIFIER | NA18522.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0129 | 1 | 304 | 0.0033 | -17 | c.436 others(34): Show |
LARP1 | ENSG00000155506.19 | transcript | ENST00000518297.6 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
LARP4_chr12_50395885_50485004 | 50456445 | GCTTCTAA others(10): Show |
G | intron_variant | MODIFIER | HG02145.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0024 | 1 | 318 | 0.0031 | -17 | c.112 others(36): Show |
LARP4 | ENSG00000161813.23 | transcript | ENST00000398473.7 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LARS1_chr5_146108034_146187650 | 146181848 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG02145.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0196 | 1 | 284 | 0.0035 | -17 | c.6+6 others(28): Show |
LARS1 | ENSG00000133706.20 | transcript | ENST00000394434.7 | protein_coding | 1/31 | chr5 | TogoVar | |||||||
LARS1_chr5_146108034_146187650 | 146183381 | CTTTTTTT others(10): Show |
C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG00438.hp1 others(142): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0005a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0008others(7): Show | a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0013 others(141): Show |
145 | 284 | 0.5106 | -17 | c.-90 others(26): Show |
LARS1 | ENSG00000133706.20 | transcript | ENST00000394434.7 | protein_coding | 732 | chr5 | TogoVar | |||||||
LAT2_chr7_74205006_74234834 | 74219009 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG00597.hp2 HG01943.hp1 HG02145.hp1 others(6): Show |
a0001a0005 | a0001c0001a0001c0003a0005c0006 | a0001c0001t0001a0001c0001t0003a0001c0003t0001others(1): Show | a0001c0001t0001g0027 a0001c0001t0001g0037 a0001c0001t0001g0039 others(6): Show |
9 | 344 | 0.0262 | -17 | c.135 others(32): Show |
LAT2 | ENSG00000086730.17 | transcript | ENST00000460943.6 | protein_coding | 4/13 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LAT2_chr7_74205006_74234834 | 74220767 | GCCTCTCC others(10): Show |
G | intron_variant | MODIFIER | HG01243.hp2 HG01891.hp1 HG02258.hp2 others(6): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0011 | a0001c0001t0001a0001c0002t0001a0004c0011t0001 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 others(6): Show |
9 | 344 | 0.0262 | -17 | c.332 others(30): Show |
LAT2 | ENSG00000086730.17 | transcript | ENST00000460943.6 | protein_coding | 9/13 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LATS2_chr13_20968036_21066586 | 20969690 | AAAAAAAA others(10): Show |
A | downstream_gene_variant | MODIFIER | HG01175.hp1 | a0004 | a0004c0003 | a0004c0003t0005 | a0004c0003t0005g0247 | 1 | 316 | 0.0032 | -17 | c.*51 others(28): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 3345 | chr13 | TogoVar | |||||||
LATS2_chr13_20968036_21066586 | 20969696 | AAATATAT others(10): Show |
A | downstream_gene_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0228 | 1 | 316 | 0.0032 | -17 | c.*51 others(28): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 3339 | chr13 | TogoVar | |||||||
LATS2_chr13_20968036_21066586 | 20969698 | ATATATAT others(10): Show |
A | downstream_gene_variant | MODIFIER | HG01099.hp1 HG01109.hp2 HG02055.hp2 others(3): Show |
a0001a0003 | a0001c0001a0001c0010a0001c0037others(1): Show | a0001c0001t0001a0001c0010t0001a0001c0037t0001others(1): Show | a0001c0001t0001g0090 a0001c0001t0001g0223 a0001c0001t0001g0237 others(3): Show |
6 | 316 | 0.0190 | -17 | c.*51 others(28): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 3337 | chr13 | TogoVar | |||||||
LATS2_chr13_20968036_21066586 | 21023667 | AAAAAAAA others(10): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(106): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0010a0001c0037others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(23): Show | a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0178 others(106): Show |
109 | 316 | 0.3449 | -17 | c.342 others(36): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 2/7 | chr13 | TogoVar | |||||||
LBP_chr20_38341482_38382013 | 38365706 | AAAAAAAA others(10): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG02622.hp2 HG02886.hp2 others(1): Show |
a0007 | a0007c0010 | a0007c0010t0002 | a0007c0010t0002g0010 a0007c0010t0002g0333 |
4 | 394 | 0.0102 | -17 | c.921 others(32): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 8/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
LBP_chr20_38341482_38382013 | 38365708 | AAAAAAAA others(10): Show |
A | intron_variant | MODIFIER | HG00733.hp2 HG00738.hp1 HG01169.hp2 others(19): Show |
a0002a0009a0013 | a0002c0007a0002c0011a0002c0012others(2): Show | a0002c0007t0001a0002c0011t0001a0002c0012t0001others(2): Show | a0002c0007t0001g0011 a0002c0007t0001g0013 a0002c0007t0001g0034 others(15): Show |
22 | 394 | 0.0558 | -17 | c.921 others(32): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 8/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
LCA5_chr6_79479991_79542430 | 79538018 | GTTTTTTT others(10): Show |
G | upstream_gene_variant | MODIFIER | HG02630.hp1 HG03130.hp2 |
a0007 | a0007c0007 | a0007c0007t0007 | a0007c0007t0007g0208 a0007c0007t0007g0209 |
2 | 400 | 0.0050 | -17 | c.-10 others(28): Show |
LCA5 | ENSG00000135338.14 | transcript | ENST00000369846.9 | protein_coding | 589 | chr6 | TogoVar | |||||||
LCE2B_chr1_152681123_152692397 | 152683852 | AGCATACA others(10): Show |
A | upstream_gene_variant | MODIFIER | NA18986.hp2 NA19072.hp2 NA19075.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0002 | 3 | 446 | 0.0067 | -17 | c.-23 others(28): Show |
LCE2B | ENSG00000159455.9 | transcript | ENST00000368780.4 | protein_coding | 2270 | chr1 | TogoVar | |||||||
LCE3A_chr1_152617834_152628103 | 152627614 | AACAGTGT others(10): Show |
A | upstream_gene_variant | MODIFIER | HG03195.hp1 HG03516.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 2 | 410 | 0.0049 | -17 | c.-45 others(28): Show |
LCE3A | ENSG00000185962.1 | transcript | ENST00000335674.1 | protein_coding | 4512 | chr1 | TogoVar | |||||||
LCK_chr1_32246265_32291165 | 32284316 | GATATATA others(10): Show |
G | intron_variant | MODIFIER | HG02615.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0048 | 1 | 274 | 0.0037 | -17 | c.132 others(36): Show |
LCK | ENSG00000182866.18 | transcript | ENST00000336890.10 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LCLAT1_chr2_30442246_30649225 | 30534329 | GGGCTCAC others(10): Show |
G | intron_variant | MODIFIER | HG00597.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0122 | 1 | 366 | 0.0027 | -17 | c.364 others(34): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LCMT1_chr16_25106742_25183228 | 25176550 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | NA18947.hp1 NA19091.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0242 a0001c0001t0001g0307 |
2 | 348 | 0.0058 | -17 | c.983 others(34): Show |
LCMT1 | ENSG00000205629.12 | transcript | ENST00000399069.8 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
LCN15_chr9_136754634_136769518 | 136769357 | ACCCCTCC others(10): Show |
A | upstream_gene_variant | MODIFIER | NA18942.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 356 | 0.0028 | -17 | c.-48 others(28): Show |
LCN15 | ENSG00000177984.7 | transcript | ENST00000316144.6 | protein_coding | 4840 | chr9 | TogoVar | |||||||
LCORL_chr4_17836187_18026755 | 17897213 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG00673.hp1 HG02602.hp2 HG03017.hp1 others(13): Show |
a0003a0016 | a0003c0004a0016c0021 | a0003c0004t0004a0016c0021t0004 | a0003c0004t0004g0094 a0003c0004t0004g0096 a0003c0004t0004g0097 others(13): Show |
16 | 292 | 0.0548 | -17 | c.683 others(36): Show |
LCORL | ENSG00000178177.17 | transcript | ENST00000635767.2 | protein_coding | 5/7 | chr4 | TogoVar | |||||||
LCOR_chr10_96827298_97000956 | 96845449 | CTTTTTTT others(10): Show |
C | intron_variant | MODIFIER | HG00558.hp1 HG03704.hp1 |
a0002 | a0002c0002 | a0002c0002t0133a0002c0002t0138 | a0002c0002t0133g0074 a0002c0002t0138g0075 |
2 | 288 | 0.0069 | -17 | c.-33 others(38): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LCOR_chr10_96827298_97000956 | 96940303 | ATTTTTTT others(10): Show |
A | intron_variant | MODIFIER | HG03225.hp1 | a0005 | a0005c0006 | a0005c0006t0041 | a0005c0006t0041g0163 | 1 | 288 | 0.0035 | -17 | c.-18 others(36): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LCP1_chr13_46120923_46187177 | 46145908 | CAAAAAAA others(10): Show |
C | intron_variant | MODIFIER | HG02015.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0219 | 1 | 382 | 0.0026 | -17 | c.117 others(34): Show |
LCP1 | ENSG00000136167.15 | transcript | ENST00000323076.7 | protein_coding | 10/15 | chr13 | TogoVar | |||||||
LCP2_chr5_170241233_170302777 | 170289010 | TAGTTAGG others(10): Show |
T | intron_variant | MODIFIER | NA19091.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0027 | 1 | 384 | 0.0026 | -17 | c.142 others(33): Show |
LCP2 | ENSG00000043462.13 | transcript | ENST00000046794.10 | protein_coding | 2/20 | chr5 | TogoVar | |||||||
LCTL_chr15_66542532_66570998 | 66566738 | GTTTTCTT others(10): Show |
G | upstream_gene_variant | MODIFIER | HG03098.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0228 | 1 | 434 | 0.0023 | -17 | c.-92 others(26): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 741 | chr15 | TogoVar | |||||||
LCTL_chr15_66542532_66570998 | 66568913 | TATATATA others(10): Show |
T | upstream_gene_variant | MODIFIER | HG02109.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 434 | 0.0023 | -17 | c.-30 others(28): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2916 | chr15 | TogoVar |