Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LCT_chr2_135782850_135842184	135813226	TAACAATG others(10): Show TAACAATGTCAACAAGTC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00423.hp1 HG00544.hp2 others(19): Show HG00408.hp2 HG00423.hp1 HG00544.hp2 HG00558.hp1 HG01255.hp2 HG02074.hp1 HG02129.hp1 HG02148.hp1 HG02683.hp2 NA18944.hp1 NA18950.hp1 NA18955.hp1 NA18957.hp1 NA18966.hp1 NA18968.hp1 NA18973.hp1 NA18981.hp2 NA18988.hp2 NA19009.hp2 NA19054.hp1 NA19058.hp1 NA19062.hp2	a0002 a0003 a0002 a0003	a0002c0050 a0003c0004 a0002c0050 a0003c0004	a0002c0050t0001 a0003c0004t0001 a0002c0050t0001 a0003c0004t0001	a0002c0050t0001g0241 a0003c0004t0001g0004 a0003c0004t0001g0011 others(15): Show a0002c0050t0001g0241 a0003c0004t0001g0004 a0003c0004t0001g0011 a0003c0004t0001g0203 a0003c0004t0001g0204 a0003c0004t0001g0205 a0003c0004t0001g0206 a0003c0004t0001g0207 a0003c0004t0001g0208 a0003c0004t0001g0209 a0003c0004t0001g0210 a0003c0004t0001g0211 a0003c0004t0001g0212 a0003c0004t0001g0213 a0003c0004t0001g0214 a0003c0004t0001g0215 a0003c0004t0001g0216 a0003c0004t0001g0235	22	366	0.0601	-17	c.170 others(34): Show c.1708-287_1708-271delGACTTGTTGACATTGTT	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	6/16			chr2	TogoVar
LCT_chr2_135782850_135842184	135836007	TATATATA others(10): Show TATATATATGTATACATA	T T	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0237 a0001c0001t0001g0237	1	366	0.0027	-17	c.640 others(32): Show c.640+506_640+522delTATGTATACATATATAT	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	1/16			chr2	TogoVar
LDB1_chr10_102101489_102125368	102106541	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0147 a0001c0001t0060g0147	1	376	0.0027	-17	c.15 others(28): Show c.1535_*1551delTTTTTTTTTTTTTTTTT	LDB1	ENSG00000198728.11	transcript	ENST00000673968.1	protein_coding	11/11	1535		chr10	TogoVar
LDB2_chr4_16496541_16903645	16563429	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19057.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0162 a0001c0001t0010g0162	1	162	0.0062	-17	c.615 others(36): Show c.615+22476_615+22492delAAAAAAAAAAAAAAAAA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	5/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16581991	GGGAAGGA others(10): Show GGGAAGGAAGGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG01496.hp2 NA19240.hp2 HG01496.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0053 a0001c0001t0003g0016 a0001c0001t0001g0053 a0001c0001t0003g0016	2	162	0.0124	-17	c.615 others(34): Show c.615+3914_615+3930delTTCCTTCCCTTCCTTCC	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	5/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16898836	GGGAGAGA others(10): Show GGGAGAGAGAGAGAGAGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	162	0.0062	-17	c.-36 others(26): Show c.-368_-352delTCTCTCTCTCTCTCTCC	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding		192		chr4	TogoVar
LDHAL6A_chr11_18450856_18484601	18453631	TATATATA others(10): Show TATATATATATATATAGG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18966.hp1 NA18970.hp2 NA18982.hp1 others(2): Show NA18966.hp1 NA18970.hp2 NA18982.hp1 NA19000.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0010 a0001c0001t0002g0028 a0001c0001t0002g0209 a0001c0001t0002g0010 a0001c0001t0002g0028 a0001c0001t0002g0209	5	420	0.0119	-17	c.-30 others(28): Show c.-3049_-3033delATATATATATATATAGG	LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding		2224		chr11	TogoVar
LDHC_chr11_18407318_18457063	18453631	TATATATA others(10): Show TATATATATATATATAGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18970.hp1 NA18982.hp1 NA19000.hp2 others(2): Show NA18970.hp1 NA18982.hp1 NA19000.hp2 NA19003.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0204 a0001c0001t0001g0249 others(2): Show a0001c0001t0001g0008 a0001c0001t0001g0204 a0001c0001t0001g0249 a0001c0001t0001g0252 a0001c0001t0001g0256	5	348	0.0144	-17	c.25 others(28): Show c.2505_*2521delATATATATATATATAGG	LDHC	ENSG00000166796.12	transcript	ENST00000541669.6	protein_coding		1569		chr11	TogoVar
LDLRAD2_chr1_21807265_21830225	21812829	CACACTCT others(10): Show CACACTCTGCCACTTCTT	C C	intron_variant intron_variant	MODIFIER	NA18982.hp2 NA18982.hp2	a0006 a0006	a0006c0015 a0006c0015	a0006c0015t0041 a0006c0015t0041	a0006c0015t0041g0233 a0006c0015t0041g0233	1	454	0.0022	-17	c.85+ others(30): Show c.85+295_85+311delCACTCTGCCACTTCTTA	LDLRAD2	ENSG00000187942.12	transcript	ENST00000344642.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
LDLRAD3_chr11_35939062_36237136	36147098	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01099.hp1 HG01192.hp2 others(31): Show HG01081.hp2 HG01099.hp1 HG01192.hp2 HG01256.hp1 HG01258.hp1 HG01346.hp2 HG01361.hp1 HG01496.hp2 HG01515.hp2 HG01517.hp1 HG01934.hp2 HG01952.hp1 HG02004.hp1 HG02145.hp2 HG02257.hp2 HG02300.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02895.hp2 HG02897.hp1 HG03017.hp1 HG03041.hp2 HG03139.hp2 HG03209.hp1 HG03492.hp1 HG03669.hp1 HG03688.hp2 HG03710.hp2 HG04199.hp2 NA18906.hp1 NA18970.hp1 NA19088.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0005c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0006 a0001c0002t0013 a0002c0003t0001 a0002c0003t0004 a0005c0009t0006	a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0105 others(31): Show a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0001g0117 a0001c0001t0001g0136 a0001c0001t0001g0148 a0001c0001t0001g0151 a0001c0001t0001g0154 a0001c0001t0002g0088 a0001c0001t0002g0132 a0001c0001t0002g0144 a0001c0001t0002g0171 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0195 a0001c0001t0002g0213 a0001c0001t0006g0014 a0001c0001t0006g0203 a0001c0001t0010g0064 a0001c0001t0010g0106 a0001c0002t0001g0021 a0001c0002t0001g0137 a0001c0002t0001g0165 a0001c0002t0002g0006 a0001c0002t0002g0050 a0001c0002t0004g0013 a0001c0002t0004g0015 a0001c0002t0004g0048 a0001c0002t0006g0180 a0001c0002t0013g0184 a0001c0002t0013g0185 a0002c0003t0001g0004 a0002c0003t0004g0236 a0005c0009t0006g0208	34	236	0.1441	-17	c.454 others(36): Show c.454+48658_454+48674delTTTTTTTTTTTTTTTTT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD4_chr18_13213760_13657751	13321861	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0143 a0001c0001t0013g0143	1	178	0.0056	-17	c.-38 others(38): Show c.-383+43698_-383+43714delAAAAAAAAAAAAAAAAA	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13459159	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01261.hp2 NA20752.hp1 HG00140.hp1 HG01261.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0045 a0001c0001t0055 a0001c0001t0004 a0001c0001t0045 a0001c0001t0055	a0001c0001t0004g0153 a0001c0001t0045g0011 a0001c0001t0055g0016 a0001c0001t0004g0153 a0001c0001t0045g0011 a0001c0001t0055g0016	3	178	0.0169	-17	c.181 others(36): Show c.181+20791_181+20807delAAAAAAAAAAAAAAAAA	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13610265	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01071.hp2 HG02559.hp1 others(7): Show HG00642.hp2 HG01071.hp2 HG02559.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02922.hp2 HG02976.hp2 HG03130.hp1 HG03471.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0018 a0001c0001t0046 a0001c0002t0001 a0001c0002t0014 a0002c0003t0005	a0001c0001t0001g0065 a0001c0001t0001g0141 a0001c0001t0003g0130 others(7): Show a0001c0001t0001g0065 a0001c0001t0001g0141 a0001c0001t0003g0130 a0001c0001t0007g0073 a0001c0001t0018g0075 a0001c0001t0046g0078 a0001c0002t0001g0136 a0001c0002t0014g0052 a0001c0002t0014g0123 a0002c0003t0005g0080	10	178	0.0562	-17	c.182 others(36): Show c.182-10828_182-10812delTTTTTTTTTTTTTTTTT	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LEPR_chr1_65415668_65646559	65557167	AAAATTAA others(10): Show AAAATTAATCAATAATTT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0007 a0007	a0007c0024 a0007c0024	a0007c0024t0002 a0007c0024t0002	a0007c0024t0002g0205 a0007c0024t0002g0205	1	216	0.0046	-17	c.-20 others(34): Show c.-20-8378_-20-8362delAAATTAATCAATAATTT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19			chr1	TogoVar
LEP_chr7_128236278_128262629	128258717	CTTTCTTT others(10): Show CTTTCTTTCTTTCTTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02129.hp2 HG02155.hp1 HG04184.hp2 others(3): Show HG02129.hp2 HG02155.hp1 HG04184.hp2 NA19082.hp2 NA19090.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0005 a0001c0001t0001 a0001c0002t0005	a0001c0001t0001g0001 a0001c0002t0005g0006 a0001c0002t0005g0047 others(1): Show a0001c0001t0001g0001 a0001c0002t0005g0006 a0001c0002t0005g0047 a0001c0002t0005g0053	6	395	0.0152	-17	c.39 others(28): Show c.3955_*3971delTTTCTTTCTTTCTTTCT	LEP	ENSG00000174697.5	transcript	ENST00000308868.5	protein_coding		1089		chr7	TogoVar
LETM2_chr8_38381476_38414527	38391194	AAAAACAA others(10): Show AAAAACAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03540.hp1 HG02572.hp1 HG03540.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0005 a0001c0001 a0007c0005	a0001c0001t0007 a0007c0005t0001 a0001c0001t0007 a0007c0005t0001	a0001c0001t0007g0232 a0007c0005t0001g0223 a0001c0001t0007g0232 a0007c0005t0001g0223	2	364	0.0055	-17	c.48- others(32): Show c.48-1347_48-1331delAAAACAAAAAAAAAAAC	LETM2	ENSG00000165046.13	transcript	ENST00000379957.9	protein_coding	2/10			chr8	TogoVar
LGALS4_chr19_38796674_38817945	38802997	CTTTTCTT others(10): Show CTTTTCTTTTTCTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0077 a0001c0001t0001g0077	1	426	0.0024	-17	c.570 others(32): Show c.570+508_570+524delAAAAAAGAAAAAGAAAA	LGALS4	ENSG00000171747.9	transcript	ENST00000307751.9	protein_coding	7/9			chr19	TogoVar
LGI3_chr8_22141830_22161806	22157799	TTTGTAAA others(10): Show TTTGTAAAATAATTTTGC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0041 a0002c0002t0007g0041	1	408	0.0025	-17	c.-12 others(28): Show c.-1274_-1258delGCAAAATTATTTTACAA	LGI3	ENSG00000168481.9	transcript	ENST00000306317.7	protein_coding		994		chr8	TogoVar
LGMN_chr14_92698809_92753627	92719251	ACCACCAC others(10): Show ACCACCACCGCCACCGCC	A A	intron_variant intron_variant	MODIFIER	NA18977.hp2 NA18977.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0254 a0001c0001t0001g0254	1	420	0.0024	-17	c.139 others(32): Show c.139-424_139-408delGGCGGTGGCGGTGGTGG	LGMN	ENSG00000100600.15	transcript	ENST00000334869.9	protein_coding	2/13			chr14	TogoVar
LGR4_chr11_27360961_27477790	27474831	CTACTTTT others(10): Show CTACTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0003 a0001c0001t0019g0003	1	244	0.0041	-17	c.-25 others(28): Show c.-2546_-2530delAAAAAAAAAAAAAAGTA	LGR4	ENSG00000205213.14	transcript	ENST00000379214.9	protein_coding		2042		chr11	TogoVar
LGR6_chr1_202188799_202324761	202204906	AAACACAC others(10): Show AAACACACACACACACCT	A A	intron_variant intron_variant	MODIFIER	NA18980.hp1 NA18982.hp1 NA18980.hp1 NA18982.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0084 a0002c0002t0003g0088 a0002c0002t0003g0084 a0002c0002t0003g0088	2	262	0.0076	-17	c.212 others(36): Show c.212+10715_212+10731delACACACCTAACACACAC	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
LGR6_chr1_202188799_202324761	202324231	CTCAAAGA others(10): Show CTCAAAGACGTTTCCACA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG03209.hp1 NA18522.hp1 HG01891.hp2 HG03209.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0132 a0001c0001t0004g0054 a0001c0001t0004g0056 a0001c0001t0001g0132 a0001c0001t0004g0054 a0001c0001t0004g0056	3	262	0.0115	-17	c.50 others(28): Show c.5025_*5041delTCAAAGACGTTTCCACA	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding		4471		chr1	TogoVar
LHFPL2_chr5_78480230_78653772	78652761	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	254	0.0039	-17	c.-46 others(28): Show c.-4629_-4613delAAAAAAAAAAAAAAAAA	LHFPL2	ENSG00000145685.14	transcript	ENST00000380345.7	protein_coding		3990		chr5	TogoVar
LHFPL3_chr7_104323603_104913561	104343512	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00558.hp2 others(18): Show HG00099.hp1 HG00323.hp2 HG00558.hp2 HG00621.hp2 HG00639.hp2 HG00733.hp1 HG01070.hp1 HG01192.hp2 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02559.hp1 HG02965.hp2 HG03017.hp2 NA18612.hp1 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0013	a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0047 others(18): Show a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0002g0001 a0001c0001t0002g0034 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0003g0046 a0001c0001t0003g0053 a0001c0001t0003g0055 a0001c0001t0003g0058 a0001c0001t0004g0045 a0001c0001t0004g0082 a0001c0001t0013g0049	21	86	0.2442	-17	c.445 others(36): Show c.445+14311_445+14327delAAAAAAAAAAAAAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104400104	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01257.hp2 HG01258.hp1 others(1): Show HG01074.hp2 HG01257.hp2 HG01258.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0071 others(1): Show a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0071 a0001c0001t0004g0079	4	86	0.0465	-17	c.445 others(36): Show c.445+70907_445+70923delAAAAAAAAAAAAAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104737974	CACTGTTT others(10): Show CACTGTTTATGCGGGTAA	C C	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01168.hp1 HG01192.hp1 others(7): Show HG01123.hp1 HG01168.hp1 HG01192.hp1 HG01255.hp2 HG02056.hp1 HG02293.hp1 HG03239.hp1 HG03831.hp2 NA18986.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008	a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0002g0026 others(7): Show a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0002g0026 a0001c0001t0002g0077 a0001c0001t0003g0003 a0001c0001t0004g0036 a0001c0001t0005g0005 a0001c0001t0007g0016 a0001c0001t0007g0032 a0001c0001t0008g0021	10	86	0.1163	-17	c.682 others(34): Show c.682+1084_682+1100delGTTTATGCGGGTAAACT	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104824461	TTTATATA others(10): Show TTTATATATAATATATAA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0049 a0001c0001t0013g0049	1	86	0.0116	-17	c.683 others(36): Show c.683-81714_683-81698delATATAATTATATATAAT	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL5_chr6_35800352_35829070	35821857	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 NA19070.hp2 HG01884.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0039 a0001c0001t0030 a0001c0001t0039	a0001c0001t0030g0107 a0001c0001t0039g0088 a0001c0001t0030g0107 a0001c0001t0039g0088	2	386	0.0052	-17	c.17 others(34): Show c.17-1107_*17-1091delTTTTTTTTTTTTTTTTT	LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr6	TogoVar
LHFPL6_chr13_39337892_39608193	39345512	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01934.hp2 HG02056.hp1 others(28): Show HG01243.hp1 HG01934.hp2 HG02056.hp1 HG02109.hp2 HG02129.hp2 HG02135.hp1 HG02145.hp1 HG02257.hp2 HG02280.hp2 HG02486.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02818.hp2 HG02965.hp2 HG02970.hp1 HG03471.hp1 HG03579.hp1 NA18612.hp1 NA18956.hp1 NA18975.hp2 NA18978.hp2 NA18984.hp1 NA18989.hp1 NA18990.hp2 NA18993.hp2 NA19056.hp2 NA19063.hp1 NA19066.hp2 NA19082.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(8): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0002t0010 a0001c0005t0005	a0001c0001t0001g0172 a0001c0001t0005g0024 a0001c0001t0005g0035 others(28): Show a0001c0001t0001g0172 a0001c0001t0005g0024 a0001c0001t0005g0035 a0001c0001t0005g0036 a0001c0001t0005g0044 a0001c0001t0005g0049 a0001c0001t0005g0063 a0001c0001t0005g0064 a0001c0001t0005g0070 a0001c0001t0005g0078 a0001c0001t0005g0082 a0001c0001t0005g0090 a0001c0001t0005g0148 a0001c0001t0005g0171 a0001c0001t0005g0185 a0001c0001t0005g0235 a0001c0001t0006g0230 a0001c0001t0008g0164 a0001c0001t0010g0031 a0001c0001t0010g0032 a0001c0001t0010g0039 a0001c0001t0010g0071 a0001c0001t0010g0118 a0001c0001t0010g0220 a0001c0001t0019g0002 a0001c0001t0020g0003 a0001c0001t0022g0210 a0001c0001t0023g0061 a0001c0002t0010g0018 a0001c0002t0010g0022 a0001c0005t0005g0052	31	242	0.1281	-17	c.485 others(34): Show c.485-1475_485-1459delTTTTTTTTTTTTTTTTT	LHFPL6	ENSG00000183722.9	transcript	ENST00000379589.4	protein_coding	3/3			chr13	TogoVar
LHFPL6_chr13_39337892_39608193	39548172	CATAATAT others(10): Show CATAATATTTCCCAGGTA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00544.hp2 others(81): Show HG00408.hp1 HG00438.hp1 HG00544.hp2 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01123.hp2 HG01167.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01261.hp2 HG01433.hp1 HG01496.hp2 HG01884.hp2 HG01981.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02717.hp1 HG02717.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03098.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03579.hp2 HG04199.hp2 NA18906.hp1 NA18906.hp2 NA18969.hp2 NA18975.hp1 NA18984.hp2 NA18991.hp2 NA18994.hp1 NA19003.hp2 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19068.hp1 NA19083.hp2 NA19088.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0018 a0001c0001t0019 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0031 a0001c0002t0001 a0001c0002t0002 a0001c0002t0007 a0001c0002t0009 a0001c0002t0011 a0001c0003t0003 a0001c0006t0002	a0001c0001t0001g0054 a0001c0001t0001g0066 a0001c0001t0001g0068 others(81): Show a0001c0001t0001g0054 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0072 a0001c0001t0001g0105 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0120 a0001c0001t0001g0140 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0002g0027 a0001c0001t0002g0033 a0001c0001t0002g0040 a0001c0001t0002g0060 a0001c0001t0002g0065 a0001c0001t0002g0067 a0001c0001t0002g0074 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0205 a0001c0001t0002g0207 a0001c0001t0003g0004 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0037 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0095 a0001c0001t0003g0097 a0001c0001t0003g0102 a0001c0001t0003g0111 a0001c0001t0003g0132 a0001c0001t0003g0232 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0187 a0001c0001t0005g0035 a0001c0001t0005g0036 a0001c0001t0005g0070 a0001c0001t0006g0034 a0001c0001t0006g0096 a0001c0001t0006g0106 a0001c0001t0006g0113 a0001c0001t0007g0126 a0001c0001t0007g0139 a0001c0001t0007g0186 a0001c0001t0007g0233 a0001c0001t0008g0038 a0001c0001t0008g0108 a0001c0001t0008g0127 a0001c0001t0008g0229 a0001c0001t0010g0031 a0001c0001t0010g0032 a0001c0001t0010g0039 a0001c0001t0010g0071 a0001c0001t0010g0118 a0001c0001t0010g0220 a0001c0001t0011g0026 a0001c0001t0013g0094 a0001c0001t0014g0025 a0001c0001t0014g0141 a0001c0001t0014g0226 a0001c0001t0018g0238 a0001c0001t0019g0002 a0001c0001t0023g0061 a0001c0001t0025g0030 a0001c0001t0026g0177 a0001c0001t0031g0237 a0001c0002t0001g0009 a0001c0002t0001g0012 a0001c0002t0002g0008 a0001c0002t0007g0010 a0001c0002t0009g0007 a0001c0002t0011g0011 a0001c0002t0011g0019 a0001c0003t0003g0133 a0001c0006t0002g0228	84	242	0.3471	-17	c.385 others(36): Show c.385+52643_385+52659delTACCTGGGAAATATTAT	LHFPL6	ENSG00000183722.9	transcript	ENST00000379589.4	protein_coding	2/3			chr13	TogoVar
LHFPL6_chr13_39337892_39608193	39563090	AAACACAC others(10): Show AAACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02135.hp2 HG02135.hp1 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0115 a0001c0001t0010g0118 a0001c0001t0001g0115 a0001c0001t0010g0118	2	242	0.0083	-17	c.385 others(36): Show c.385+37725_385+37741delGTGTGTGTGTGTGTGTT	LHFPL6	ENSG00000183722.9	transcript	ENST00000379589.4	protein_coding	2/3			chr13	TogoVar
LHPP_chr10_124456823_124619141	124479576	GTTTCTGG others(10): Show GTTTCTGGTGAGGCCCCT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01346.hp2 HG02015.hp1 others(13): Show HG00738.hp1 HG01346.hp2 HG02015.hp1 HG02145.hp1 HG02523.hp1 NA18747.hp1 NA18945.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18965.hp1 NA19000.hp1 NA19000.hp2 NA19004.hp2 NA19011.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0013 a0001c0001t0001 a0001c0001t0003 a0001c0001t0013	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(13): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0017 a0001c0001t0001g0075 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0244 a0001c0001t0003g0076 a0001c0001t0013g0235	16	260	0.0615	-17	c.126 others(34): Show c.126-4555_126-4539delTGAGGCCCCTTTTCTGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124613382	CCTCCTCC others(10): Show CCTCCTCCACCCCTGCCT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00735.hp2 HG01069.hp1 others(8): Show HG00140.hp1 HG00735.hp2 HG01069.hp1 HG01071.hp2 HG01081.hp1 HG01261.hp2 HG01346.hp1 HG01433.hp2 HG02486.hp2 HG03017.hp2 HG03831.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0004 a0003c0003t0006 a0001c0001t0004 a0003c0003t0006	a0001c0001t0004g0020 a0001c0001t0004g0029 a0001c0001t0004g0059 others(8): Show a0001c0001t0004g0020 a0001c0001t0004g0029 a0001c0001t0004g0059 a0001c0001t0004g0060 a0001c0001t0004g0105 a0001c0001t0004g0112 a0001c0001t0004g0113 a0001c0001t0004g0114 a0001c0001t0004g0115 a0001c0001t0004g0173 a0003c0003t0006g0153	11	260	0.0423	-17	c.41 others(24): Show c.41_*57delTCCTCCACCCCTGCCTC	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	7/7	41	INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124615263	GGGGCTGT others(10): Show GGGGCTGTGCGTGATGCC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG00639.hp1 others(40): Show HG00323.hp2 HG00408.hp2 HG00639.hp1 HG00735.hp1 HG01123.hp1 HG01361.hp1 HG01884.hp1 HG01981.hp1 HG02040.hp1 HG02145.hp2 HG02602.hp1 HG02622.hp2 HG02698.hp2 HG02895.hp2 HG02970.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp2 HG03704.hp2 HG03927.hp2 HG03942.hp2 HG04115.hp2 HG06807.hp2 NA18906.hp1 NA18942.hp2 NA18950.hp2 NA18962.hp1 NA18964.hp1 NA18966.hp1 NA18966.hp2 NA18970.hp1 NA18990.hp1 NA18995.hp1 NA18995.hp2 NA19004.hp1 NA19011.hp1 NA19012.hp2 NA19065.hp1 NA19068.hp1 NA19081.hp1 NA19085.hp2 NA19090.hp2 NA19091.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0010 a0001c0001t0017 others(3): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0017 a0001c0001t0018 a0002c0002t0001 a0003c0003t0002	a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0032 others(40): Show a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0032 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0001g0073 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0092 a0001c0001t0001g0097 a0001c0001t0001g0128 a0001c0001t0001g0132 a0001c0001t0001g0138 a0001c0001t0001g0144 a0001c0001t0001g0166 a0001c0001t0001g0175 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0187 a0001c0001t0001g0190 a0001c0001t0001g0203 a0001c0001t0001g0210 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0221 a0001c0001t0010g0042 a0001c0001t0017g0025 a0001c0001t0018g0037 a0002c0002t0001g0125 a0002c0002t0001g0129 a0002c0002t0001g0208 a0003c0003t0002g0009 a0003c0003t0002g0012 a0003c0003t0002g0260	43	260	0.1654	-17	c.19 others(28): Show c.1904_*1920delGGGCTGTGCGTGATGCC	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding		1123		chr10	TogoVar
LHPP_chr10_124456823_124619141	124615480	CGTGATGC others(10): Show CGTGATGCCGGGCTGCGG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG01070.hp2 HG02145.hp1 others(12): Show HG00140.hp2 HG01070.hp2 HG02145.hp1 HG02451.hp2 HG02735.hp2 HG03688.hp2 HG04204.hp1 NA18747.hp1 NA18944.hp2 NA18947.hp2 NA18964.hp2 NA18986.hp2 NA19064.hp2 NA19077.hp1 NA19081.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0006c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 a0002c0002t0003 a0003c0003t0009 a0006c0007t0003	a0001c0001t0001g0244 a0001c0001t0003g0035 a0001c0001t0003g0064 others(12): Show a0001c0001t0001g0244 a0001c0001t0003g0035 a0001c0001t0003g0064 a0001c0001t0003g0076 a0001c0001t0003g0101 a0001c0001t0003g0171 a0001c0001t0003g0177 a0001c0001t0003g0182 a0001c0001t0003g0202 a0001c0001t0003g0205 a0001c0001t0003g0207 a0001c0001t0012g0027 a0002c0002t0003g0030 a0003c0003t0009g0257 a0006c0007t0003g0215	15	260	0.0577	-17	c.21 others(28): Show c.2121_*2137delGTGATGCCGGGCTGCGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding		1340		chr10	TogoVar
LHPP_chr10_124456823_124619141	124615550	TGTGATGC others(10): Show TGTGATGCCGGGCTGTGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG01192.hp1 HG03130.hp2 others(3): Show HG00140.hp2 HG01192.hp1 HG03130.hp2 NA18747.hp1 NA18964.hp2 NA19064.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0003 a0001c0001t0001 a0001c0001t0003 a0002c0002t0003	a0001c0001t0001g0100 a0001c0001t0001g0249 a0001c0001t0003g0035 others(3): Show a0001c0001t0001g0100 a0001c0001t0001g0249 a0001c0001t0003g0035 a0001c0001t0003g0064 a0001c0001t0003g0076 a0002c0002t0003g0030	6	260	0.0231	-17	c.21 others(28): Show c.2191_*2207delGTGATGCCGGGCTGTGC	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding		1410		chr10	TogoVar
LHPP_chr10_124456823_124619141	124615610	GGGCTGTG others(10): Show GGGCTGTGCGTGATGCCA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG02258.hp2 HG03209.hp1 others(4): Show HG00140.hp2 HG02258.hp2 HG03209.hp1 HG03209.hp2 NA18747.hp1 NA18964.hp2 NA19064.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0002c0002t0003 a0003c0004t0007	a0001c0001t0001g0250 a0001c0001t0003g0035 a0001c0001t0003g0064 others(4): Show a0001c0001t0001g0250 a0001c0001t0003g0035 a0001c0001t0003g0064 a0001c0001t0003g0076 a0001c0001t0011g0093 a0002c0002t0003g0030 a0003c0004t0007g0006	7	260	0.0269	-17	c.22 others(28): Show c.2251_*2267delGGCTGTGCGTGATGCCA	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding		1470		chr10	TogoVar
LHX4_chr1_180225264_180283984	180259813	GAAGGGCA others(10): Show GAAGGGCAGTCCCTGGGT	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	402	0.0025	-17	c.249 others(34): Show c.249-6578_249-6562delAAGGGCAGTCCCTGGGT	LHX4	ENSG00000121454.6	transcript	ENST00000263726.4	protein_coding	2/5			chr1	TogoVar
LHX6_chr9_122197582_122233957	122208616	GAGGTCAG others(10): Show GAGGTCAGCAGTTCAAGA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0279 a0001c0001t0003g0279	1	438	0.0023	-17	c.115 others(34): Show c.1158+981_1158+997delTCTTGAACTGCTGACCT	LHX6	ENSG00000106852.16	transcript	ENST00000394319.9	protein_coding	9/9			chr9	TogoVar
LILRA2_chr19_54568790_54595287	54580470	CGATAGTT others(10): Show CGATAGTTTACTGAGAAT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00741.hp1 HG01168.hp1 others(20): Show HG00733.hp2 HG00741.hp1 HG01168.hp1 HG01891.hp1 HG02004.hp2 HG02109.hp2 HG02145.hp1 HG02723.hp1 HG02738.hp2 HG02809.hp2 HG02886.hp1 HG02965.hp1 HG03209.hp2 HG03471.hp1 HG03579.hp1 HG03710.hp2 HG04184.hp1 NA18943.hp2 NA19043.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1	a0002 a0005 a0015 others(2): Show a0002 a0005 a0015 a0021 a0023	a0002c0003 a0002c0014 a0005c0007 others(3): Show a0002c0003 a0002c0014 a0005c0007 a0015c0021 a0021c0016 a0023c0036	a0002c0003t0005 a0002c0003t0009 a0002c0003t0028 others(8): Show a0002c0003t0005 a0002c0003t0009 a0002c0003t0028 a0002c0003t0030 a0002c0003t0032 a0002c0003t0033 a0002c0014t0009 a0005c0007t0013 a0015c0021t0031 a0021c0016t0026 a0023c0036t0009	a0002c0003t0005g0010 a0002c0003t0005g0109 a0002c0003t0005g0110 others(14): Show a0002c0003t0005g0010 a0002c0003t0005g0109 a0002c0003t0005g0110 a0002c0003t0005g0111 a0002c0003t0009g0058 a0002c0003t0009g0059 a0002c0003t0009g0093 a0002c0003t0028g0010 a0002c0003t0030g0010 a0002c0003t0032g0010 a0002c0003t0033g0097 a0002c0014t0009g0104 a0005c0007t0013g0023 a0005c0007t0013g0096 a0015c0021t0031g0098 a0021c0016t0026g0055 a0023c0036t0009g0126	23	427	0.0539	-17	c.125 others(36): Show c.1255+4365_1255+4381delAGTTTACTGAGAATGAT	LILRA2	ENSG00000239998.7	transcript	ENST00000391738.8	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr19	TogoVar
LILRA4_chr19_54328185_54344162	54330701	CTCTTTTT others(10): Show CTCTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0002 a0002	a0002c0026 a0002c0026	a0002c0026t0001 a0002c0026t0001	a0002c0026t0001g0201 a0002c0026t0001g0201	1	471	0.0021	-17	c.28 others(28): Show c.2854_*2870delAAAAAAAAAAAAAAAGA	LILRA4	ENSG00000239961.3	transcript	ENST00000291759.5	protein_coding		2483		chr19	TogoVar
LIMA1_chr12_50170788_50288520	50190682	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0160 a0001c0001t0004g0160	1	294	0.0034	-17	c.114 others(36): Show c.1140+1753_1140+1769delAAAAAAAAAAAAAAAAA	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	9/10			chr12	TogoVar
LIMD1_chr3_45589751_45691341	45658535	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0202 a0001c0001t0001g0202	1	358	0.0028	-17	c.151 others(36): Show c.1511-7099_1511-7083delTTTTTTTTTTTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
LIMK2_chr22_31207298_31285080	31255978	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02559.hp1 HG02717.hp2 others(2): Show HG02257.hp2 HG02559.hp1 HG02717.hp2 HG02818.hp2 HG03486.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0275 a0001c0001t0001g0276 a0002c0002t0001g0007 others(1): Show a0001c0001t0001g0275 a0001c0001t0001g0276 a0002c0002t0001g0007 a0002c0002t0001g0340	5	358	0.0140	-17	c.117 others(34): Show c.117-2291_117-2275delTTTTTTTTTTTTTTTTT	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMK2_chr22_31207298_31285080	31257040	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02896.hp1 HG02886.hp1 HG02896.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0253 a0002c0002t0001g0254 a0002c0002t0001g0253 a0002c0002t0001g0254	2	358	0.0056	-17	c.117 others(34): Show c.117-1233_117-1217delTTTTTTTTTTTTTTTTT	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMS1_chr2_108529470_108692246	108562161	CTGGCCAT others(10): Show CTGGCCATTTGCCGATCT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02886.hp2 HG02896.hp1 others(1): Show HG02717.hp2 HG02886.hp2 HG02896.hp1 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0019 a0001c0002t0001g0021 a0001c0002t0001g0029 others(1): Show a0001c0002t0001g0019 a0001c0002t0001g0021 a0001c0002t0001g0029 a0001c0002t0001g0059	4	246	0.0163	-17	c.32+ others(34): Show c.32+27568_32+27584delTGGCCATTTGCCGATCT	LIMS1	ENSG00000169756.17	transcript	ENST00000544547.6	protein_coding	1/9			chr2	TogoVar
LIMS2_chr2_127633426_127680530	127668668	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18612.hp1 NA18991.hp2 NA19067.hp1 others(1): Show NA18612.hp1 NA18991.hp2 NA19067.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0036 a0001c0001t0037 a0001c0001t0002 a0001c0001t0036 a0001c0001t0037	a0001c0001t0002g0206 a0001c0001t0002g0293 a0001c0001t0036g0124 others(1): Show a0001c0001t0002g0206 a0001c0001t0002g0293 a0001c0001t0036g0124 a0001c0001t0037g0125	4	348	0.0115	-17	c.11+ others(32): Show c.11+6329_11+6345delTTTTTTTTTTTTTTTTT	LIMS2	ENSG00000072163.20	transcript	ENST00000355119.9	protein_coding	1/9			chr2	TogoVar
LIMS2_chr2_127633426_127680530	127668695	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0010 a0001c0003t0010	a0001c0003t0010g0143 a0001c0003t0010g0143	1	348	0.0029	-17	c.11+ others(32): Show c.11+6302_11+6318delGTTTTTTTTTTTTTTTT	LIMS2	ENSG00000072163.20	transcript	ENST00000355119.9	protein_coding	1/9			chr2	TogoVar
LIN28A_chr1_26405817_26434728	26423407	CTTTTTCT others(10): Show CTTTTTCTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 NA18906.hp1 HG02572.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0051 a0001c0001t0011g0053 a0001c0001t0011g0051 a0001c0001t0011g0053	2	376	0.0053	-17	c.229 others(34): Show c.229-1890_229-1874delCTTTTTTTTTTTTTTTT	LIN28A	ENSG00000131914.11	transcript	ENST00000326279.11	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
LIN28B_chr6_104952107_105088332	105043341	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01106.hp2 HG01167.hp2 others(57): Show HG00423.hp2 HG01106.hp2 HG01167.hp2 HG01255.hp1 HG01258.hp1 HG01516.hp1 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01978.hp1 HG01981.hp2 HG02004.hp2 HG02027.hp1 HG02074.hp2 HG02083.hp2 HG02135.hp2 HG02165.hp2 HG02698.hp1 HG02738.hp1 HG02738.hp2 HG03239.hp2 HG03490.hp2 HG03710.hp1 HG06807.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18965.hp2 NA18971.hp2 NA18984.hp1 NA18984.hp2 NA18989.hp1 NA18990.hp1 NA18995.hp1 NA18995.hp2 NA19000.hp2 NA19003.hp2 NA19004.hp1 NA19007.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp1 NA19057.hp1 NA19062.hp2 NA19064.hp2 NA19074.hp1 NA19080.hp2 NA19090.hp2 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0001c0001t0018 a0001c0001t0022	a0001c0001t0001g0258 a0001c0001t0003g0065 a0001c0001t0003g0066 others(57): Show a0001c0001t0001g0258 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0090 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0094 a0001c0001t0003g0096 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0003g0107 a0001c0001t0003g0108 a0001c0001t0003g0109 a0001c0001t0003g0119 a0001c0001t0003g0148 a0001c0001t0003g0150 a0001c0001t0003g0184 a0001c0001t0003g0189 a0001c0001t0003g0196 a0001c0001t0003g0201 a0001c0001t0003g0203 a0001c0001t0003g0208 a0001c0001t0003g0224 a0001c0001t0003g0231 a0001c0001t0003g0264 a0001c0001t0003g0265 a0001c0001t0003g0267 a0001c0001t0003g0268 a0001c0001t0003g0269 a0001c0001t0003g0270 a0001c0001t0003g0274 a0001c0001t0011g0076 a0001c0001t0011g0081 a0001c0001t0011g0089 a0001c0001t0018g0190 a0001c0001t0022g0085	60	278	0.2158	-17	c.383 others(36): Show c.383+16874_383+16890delAAAAAAAAAAAAAAAAA	LIN28B	ENSG00000187772.8	transcript	ENST00000345080.5	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr6	TogoVar

Search by Variant

Search

Search Results