Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LIN9_chr1_226226157_226314164	226284926	AGTTTCAC others(10): Show AGTTTCACCAATTGATTT	A A	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0192 a0001c0001t0003g0192	1	364	0.0028	-17	c.524 others(34): Show c.524+1390_524+1406delAAATCAATTGGTGAAAC		LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	6/14						chr1	TogoVar
LIN9_chr1_226226157_226314164	226305315	GAAAAAAA others(10): Show GAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA19080.hp1 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0323 a0001c0001t0001g0323	1	364	0.0028	-17	c.31+ others(32): Show c.31+3777_31+3793delTTTTTTTTTTTTTTTTT		LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	1/14						chr1	TogoVar
LINGO2_chr9_27932617_29218601	28029683	ATTAGTCA others(10): Show ATTAGTCAAAACTAATAT	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0030 a0001c0001t0027g0030	1	62	0.0161	-17	c.-35 others(36): Show c.-35-78994_-35-78978delATATTAGTTTTGACTAA		LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6						chr9	TogoVar
LINGO2_chr9_27932617_29218601	28441251	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG06807.hp1 HG03486.hp1 HG06807.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0025 a0002c0002t0001 a0001c0001t0025 a0002c0002t0001	a0001c0001t0025g0055 a0002c0002t0001g0050 a0001c0001t0025g0055 a0002c0002t0001g0050	2	62	0.0323	-17	c.-22 others(38): Show c.-228+34672_-228+34688delAAAAAAAAAAAAAAAAA		LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6						chr9	TogoVar
LINGO2_chr9_27932617_29218601	29085281	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp2 HG00597.hp1 others(14): Show HG00408.hp1 HG00408.hp2 HG00597.hp1 HG00642.hp2 HG00741.hp2 HG01071.hp2 HG01074.hp2 HG01261.hp1 HG02451.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG03139.hp1 HG03486.hp2 NA18990.hp2 NA19060.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0011 a0001c0001t0015 a0001c0001t0022 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0036 a0001c0004t0005	a0001c0001t0001g0029 a0001c0001t0001g0035 a0001c0001t0001g0047 others(14): Show a0001c0001t0001g0029 a0001c0001t0001g0035 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0002g0052 a0001c0001t0003g0032 a0001c0001t0003g0034 a0001c0001t0003g0049 a0001c0001t0004g0033 a0001c0001t0011g0002 a0001c0001t0015g0012 a0001c0001t0022g0031 a0001c0001t0024g0027 a0001c0001t0026g0013 a0001c0001t0027g0030 a0001c0001t0036g0062 a0001c0004t0005g0054	17	62	0.2742	-17	c.-49 others(40): Show c.-492+127624_-492+127640delTTTTTTTTTTTTTTTTT		LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/6						chr9	TogoVar
LIPA_chr10_89208572_89256775	89248439	TTTATATT others(10): Show TTTATATTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00423.hp1 others(95): Show HG00140.hp2 HG00280.hp2 HG00423.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00738.hp2 HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01358.hp1 HG01358.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp1 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02165.hp1 HG02257.hp1 HG02258.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02602.hp2 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02723.hp1 HG02735.hp2 HG02738.hp2 HG02965.hp2 HG03017.hp1 HG03041.hp2 HG03239.hp2 HG03516.hp2 HG03654.hp2 HG03669.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18948.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18963.hp2 NA18967.hp1 NA18968.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18982.hp2 NA18983.hp1 NA18990.hp2 NA18999.hp2 NA19001.hp2 NA19003.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0009 a0001c0001 a0002c0002 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0006 a0002c0002t0015 a0006c0009t0001	a0001c0001t0001g0143 a0001c0001t0001g0264 a0001c0001t0002g0142 others(70): Show a0001c0001t0001g0143 a0001c0001t0001g0264 a0001c0001t0002g0142 a0001c0001t0002g0144 a0002c0002t0001g0001 a0002c0002t0001g0002 a0002c0002t0001g0004 a0002c0002t0001g0006 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0015 a0002c0002t0001g0016 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0042 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0046 a0002c0002t0001g0047 a0002c0002t0001g0048 a0002c0002t0001g0049 a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0068 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0072 a0002c0002t0001g0075 a0002c0002t0001g0076 a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0001g0079 a0002c0002t0001g0080 a0002c0002t0001g0081 a0002c0002t0001g0082 a0002c0002t0001g0083 a0002c0002t0001g0084 a0002c0002t0001g0085 a0002c0002t0001g0089 a0002c0002t0001g0090 a0002c0002t0001g0091 a0002c0002t0001g0092 a0002c0002t0001g0093 a0002c0002t0001g0094 a0002c0002t0001g0095 a0002c0002t0001g0096 a0002c0002t0001g0097 a0002c0002t0001g0098 a0002c0002t0001g0101 a0002c0002t0001g0102 a0002c0002t0001g0104 a0002c0002t0001g0153 a0002c0002t0002g0005 a0002c0002t0002g0050 a0002c0002t0002g0059 a0002c0002t0002g0073 a0002c0002t0002g0086 a0002c0002t0003g0041 a0002c0002t0003g0063 a0002c0002t0003g0074 a0002c0002t0003g0087 a0002c0002t0004g0088 a0002c0002t0006g0043 a0002c0002t0006g0064 a0002c0002t0006g0071 a0002c0002t0015g0103 a0006c0009t0001g0106	98	384	0.2552	-17	c.-1- others(30): Show c.-1-807_-1-791delTAAATAAATAAATATAA		LIPA	ENSG00000107798.18	transcript	ENST00000336233.10	protein_coding	1/9						chr10	TogoVar
LIPC_chr15_58426991_58574844	58511389	CCATTGCA others(10): Show CCATTGCATTTACCATTG	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02717.hp2 HG02896.hp2 others(9): Show HG02258.hp2 HG02717.hp2 HG02896.hp2 HG02897.hp2 HG03130.hp1 HG03195.hp2 HG03453.hp2 NA18522.hp1 NA18522.hp2 NA19240.hp1 NA20129.hp2 NA21309.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0006	a0001c0001 a0001c0003 a0001c0005 others(7): Show a0001c0001 a0001c0003 a0001c0005 a0001c0016 a0001c0017 a0002c0006 a0002c0012 a0004c0018 a0004c0021 a0006c0037	a0001c0001t0002 a0001c0003t0002 a0001c0005t0007 others(7): Show a0001c0001t0002 a0001c0003t0002 a0001c0005t0007 a0001c0016t0001 a0001c0017t0001 a0002c0006t0002 a0002c0012t0001 a0004c0018t0002 a0004c0021t0006 a0006c0037t0002	a0001c0001t0002g0204 a0001c0003t0002g0205 a0001c0005t0007g0003 others(9): Show a0001c0001t0002g0204 a0001c0003t0002g0205 a0001c0005t0007g0003 a0001c0016t0001g0099 a0001c0016t0001g0100 a0001c0017t0001g0055 a0001c0017t0001g0212 a0002c0006t0002g0326 a0002c0012t0001g0104 a0004c0018t0002g0337 a0004c0021t0006g0138 a0006c0037t0002g0077	12	358	0.0335	-17	c.89- others(34): Show c.89-26913_89-26897delATTGCATTGCATTTACC		LIPC	ENSG00000166035.11	transcript	ENST00000299022.10	protein_coding	1/8					INFO_REALIGN_3_PRIME	chr15	TogoVar
LIPC_chr15_58426991_58574844	58522834	CTCCAGAG others(10): Show CTCCAGAGTTCAGTTTCT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0322 a0001c0009t0001g0322	1	358	0.0028	-17	c.89- others(34): Show c.89-15494_89-15478delGAGTTCAGTTTCTTCCA		LIPC	ENSG00000166035.11	transcript	ENST00000299022.10	protein_coding	1/8					INFO_REALIGN_3_PRIME	chr15	TogoVar
LIPG_chr18_49557057_49604185	49588480	GCCATGTT others(10): Show GCCATGTTGGCCAAGTTA	G G	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02451.hp2 HG02258.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0178 a0001c0001t0039g0189 a0001c0001t0039g0178 a0001c0001t0039g0189	2	384	0.0052	-17	c.148 others(36): Show c.1481+1647_1481+1663delACCATGTTGGCCAAGTT		LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	9/9					INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPH_chr3_185501262_185557588	185522649	AAAAAGAA others(10): Show AAAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0009 a0006c0007t0009	a0006c0007t0009g0145 a0006c0007t0009g0145	1	358	0.0028	-17	c.718 others(34): Show c.718+1405_718+1421delCTTTCTTTCTTTCTTTT		LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	5/9						chr3	TogoVar
LIPI_chr21_14103813_14215955	14106197	AAAAAAAA others(10): Show AAAAAAAAATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp1 NA21309.hp1 HG02258.hp1 NA21309.hp1	a0002 a0004 a0002 a0004	a0002c0002 a0004c0003 a0002c0002 a0004c0003	a0002c0002t0002 a0004c0003t0001 a0002c0002t0002 a0004c0003t0001	a0002c0002t0002g0038 a0004c0003t0001g0046 a0002c0002t0002g0038 a0004c0003t0001g0046	2	362	0.0055	-17	c.27 others(28): Show c.2779_*2795delATATATATATTTTTTTT		LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding					2615		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106199	AAAAAAAT others(10): Show AAAAAAATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0005 a0005	a0005c0004 a0005c0004	a0005c0004t0002 a0005c0004t0002	a0005c0004t0002g0060 a0005c0004t0002g0060	1	362	0.0028	-17	c.27 others(28): Show c.2777_*2793delATATATATATATTTTTT		LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding					2613		chr21	TogoVar
LIPI_chr21_14103813_14215955	14194624	TGGTTGCC others(10): Show TGGTTGCCCTGGGCTGAG	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(20): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00558.hp1 HG01074.hp2 HG01099.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG02056.hp2 HG02080.hp1 HG02523.hp1 HG02559.hp1 HG02683.hp2 HG03927.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 NA18973.hp2 NA18980.hp1 NA19001.hp1 NA19066.hp2 NA19078.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0016	a0001c0008 a0001c0014 a0002c0007 others(2): Show a0001c0008 a0001c0014 a0002c0007 a0004c0021 a0016c0015	a0001c0008t0005 a0001c0014t0005 a0002c0007t0004 others(4): Show a0001c0008t0005 a0001c0014t0005 a0002c0007t0004 a0002c0007t0007 a0002c0007t0011 a0004c0021t0005 a0016c0015t0007	a0001c0008t0005g0333 a0001c0008t0005g0341 a0001c0008t0005g0342 others(20): Show a0001c0008t0005g0333 a0001c0008t0005g0341 a0001c0008t0005g0342 a0001c0014t0005g0327 a0002c0007t0004g0324 a0002c0007t0004g0325 a0002c0007t0004g0328 a0002c0007t0004g0330 a0002c0007t0004g0332 a0002c0007t0004g0334 a0002c0007t0004g0335 a0002c0007t0004g0336 a0002c0007t0004g0337 a0002c0007t0004g0338 a0002c0007t0004g0339 a0002c0007t0004g0340 a0002c0007t0004g0343 a0002c0007t0004g0344 a0002c0007t0007g0326 a0002c0007t0007g0331 a0002c0007t0011g0329 a0004c0021t0005g0323 a0016c0015t0007g0345	23	362	0.0635	-17	c.47- others(32): Show c.47-5222_47-5206delCTCAGCCCAGGGCAACC		LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding	1/9						chr21	TogoVar
LIPN_chr10_88755020_88784626	88767644	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01109.hp1 HG01243.hp1 others(10): Show HG00639.hp1 HG01109.hp1 HG01243.hp1 HG01358.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02809.hp2 HG02896.hp1 NA18522.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0004 a0002c0001 others(1): Show a0001c0002 a0001c0004 a0002c0001 a0003c0008	a0001c0002t0001 a0001c0004t0001 a0001c0004t0006 others(2): Show a0001c0002t0001 a0001c0004t0001 a0001c0004t0006 a0002c0001t0010 a0003c0008t0001	a0001c0002t0001g0052 a0001c0002t0001g0274 a0001c0004t0001g0255 others(7): Show a0001c0002t0001g0052 a0001c0002t0001g0274 a0001c0004t0001g0255 a0001c0004t0006g0267 a0001c0004t0006g0268 a0001c0004t0006g0269 a0002c0001t0010g0185 a0003c0008t0001g0038 a0003c0008t0001g0039 a0003c0008t0001g0198	13	394	0.0330	-17	c.536 others(34): Show c.536-1116_536-1100delAAAAAAAAAAAAAAAAA		LIPN	ENSG00000204020.6	transcript	ENST00000404459.2	protein_coding	5/9					INFO_REALIGN_3_PRIME	chr10	TogoVar
LIPT1_chr2_99149967_99168137	99161251	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02074.hp1 HG02132.hp2 others(2): Show HG01261.hp1 HG02074.hp1 HG02132.hp2 HG02976.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0153 a0001c0001t0001g0176 a0001c0001t0001g0025 a0001c0001t0001g0153 a0001c0001t0001g0176	5	406	0.0123	-17	c.-1- others(30): Show c.-1-681_-1-665delAAAAAAAAAAAAAAAAA		LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161276	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0130 a0001c0002t0001g0130	1	406	0.0025	-17	c.-1- others(30): Show c.-1-679_-1-663delAAAAAAAAAAAAAAATA		LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161282	AAAAAAAA others(10): Show AAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0221 a0001c0003t0001g0221	1	406	0.0025	-17	c.-1- others(30): Show c.-1-673_-1-657delAAAAAAAAATATATATA		LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99165038	ACACACAC others(10): Show ACACACACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0003 a0003	a0003c0011 a0003c0011	a0003c0011t0001 a0003c0011t0001	a0003c0011t0001g0087 a0003c0011t0001g0087	1	406	0.0025	-17	c.19 others(28): Show c.1960_*1976delCACACACACACACACAC		LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding					1902		chr2	TogoVar
LIX1L_chr1_145928423_145963017	145951989	AGCAACTA others(10): Show AGCAACTAATTGTGATCC	A A	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG04204.hp2 NA19062.hp2 HG02683.hp1 HG04204.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0058 a0001c0001t0010g0059 a0001c0001t0010g0060 a0001c0001t0010g0058 a0001c0001t0010g0059 a0001c0001t0010g0060	3	316	0.0095	-17	c.293 others(34): Show c.293-4224_293-4208delGGATCACAATTAGTTGC		LIX1L	ENSG00000271601.4	transcript	ENST00000604000.4	protein_coding	1/5						chr1	TogoVar
LMAN1_chr18_59322823_59364265	59347320	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00408.hp2 others(118): Show HG00280.hp1 HG00323.hp1 HG00408.hp2 HG00544.hp1 HG00609.hp2 HG00639.hp1 HG00733.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01243.hp2 HG01261.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp1 HG01884.hp2 HG01943.hp2 HG01981.hp2 HG02015.hp1 HG02074.hp1 HG02080.hp1 HG02145.hp2 HG02165.hp1 HG02257.hp1 HG02300.hp1 HG02451.hp1 HG02559.hp1 HG02647.hp2 HG02723.hp1 HG02897.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03704.hp1 HG03704.hp2 HG04115.hp1 HG04199.hp1 HG04199.hp2 HG06807.hp2 NA18940.hp1 NA18941.hp1 NA18943.hp1 NA18944.hp2 NA18946.hp1 NA18947.hp2 NA18951.hp2 NA18956.hp2 NA18957.hp2 NA18961.hp2 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18967.hp1 NA18972.hp2 NA18978.hp2 NA18979.hp1 NA18984.hp1 NA18988.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp2 NA19004.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19066.hp1 NA19068.hp1 NA19076.hp1 NA19079.hp1 NA19081.hp1 NA19082.hp1 NA19086.hp2 NA19090.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20805.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0003 a0001c0011 others(1): Show a0001c0001 a0001c0003 a0001c0011 a0007c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0003t0001 a0001c0011t0001 a0007c0012t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0009 others(59): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0088 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0145 a0001c0001t0001g0183 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0235 a0001c0001t0002g0129 a0001c0001t0002g0150 a0001c0001t0003g0046 a0001c0001t0003g0137 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0010g0202 a0001c0001t0010g0203 a0001c0001t0011g0195 a0001c0001t0012g0073 a0001c0001t0012g0074 a0001c0001t0014g0089 a0001c0001t0015g0201 a0001c0003t0001g0082 a0001c0011t0001g0194 a0007c0012t0001g0075	121	386	0.3135	-17	c.822 others(32): Show c.822+176_822+192delTTTTTTTTTTTTTTTTT		LMAN1	ENSG00000074695.6	transcript	ENST00000251047.6	protein_coding	7/12						chr18	TogoVar
LMAN1_chr18_59322823_59364265	59355523	CGACCTCT others(10): Show CGACCTCTTCCAGTCACT	C C	frameshift_variant frameshift_variant	HIGH	HG03704.hp2 HG03704.hp2	a0007 a0007	a0007c0012 a0007c0012	a0007c0012t0001 a0007c0012t0001	a0007c0012t0001g0075 a0007c0012t0001g0075	1	386	0.0026	-17	c.333 others(24): Show c.333_349delAGTGACTGGAAGAGGTC	p.Val others(5): Show p.Val112fs	LMAN1	ENSG00000074695.6	transcript	ENST00000251047.6	protein_coding	2/13	370/4824	333/1533	111/510			chr18	TogoVar
LMNB2_chr19_2423166_2461959	2434960	TTCCCACC others(10): Show TTCCCACCGGCCGCCCCC	T T	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0017 a0001c0013t0017	a0001c0013t0017g0243 a0001c0013t0017g0243	1	356	0.0028	-17	c.855 others(30): Show c.855+24_855+40delGGGGGCGGCCGGTGGGA		LMNB2	ENSG00000176619.13	transcript	ENST00000325327.4	protein_coding	5/11						chr19	TogoVar
LMNB2_chr19_2423166_2461959	2439035	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 NA18612.hp2 NA18993.hp1 others(1): Show HG00438.hp1 NA18612.hp2 NA18993.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0016 a0001c0001t0002 a0001c0001t0004 a0001c0001t0016	a0001c0001t0002g0076 a0001c0001t0002g0093 a0001c0001t0004g0077 others(1): Show a0001c0001t0002g0076 a0001c0001t0002g0093 a0001c0001t0004g0077 a0001c0001t0016g0080	4	356	0.0112	-17	c.402 others(32): Show c.402-521_402-505delAAAAAAAAAAAAAAAAA		LMNB2	ENSG00000176619.13	transcript	ENST00000325327.4	protein_coding	2/11						chr19	TogoVar
LMO3_chr12_16543372_16611162	16566023	TATATATA others(10): Show TATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp2 NA20752.hp2 HG03209.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0202 a0001c0001t0001g0283 a0001c0001t0001g0202 a0001c0001t0001g0283	2	354	0.0057	-17	c.207 others(34): Show c.207-5502_207-5486delTATATATATATATATAT		LMO3	ENSG00000048540.16	transcript	ENST00000537304.6	protein_coding	2/3						chr12	TogoVar
LMO4_chr1_87323880_87353923	87328909	TGCGCCGC others(10): Show TGCGCCGCGCCTGAAGCC	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0103 a0001c0001t0066g0103	1	392	0.0026	-17	c.-32 others(26): Show c.-329_-313delCTGAAGCCGCGCCGCGC		LMO4	ENSG00000143013.13	transcript	ENST00000370544.10	protein_coding	1/5				3081	INFO_REALIGN_3_PRIME	chr1	TogoVar
LMO7_chr13_75631330_75864866	75713057	TAACAGTC others(10): Show TAACAGTCTATATATGCA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01257.hp2 HG01891.hp2 others(23): Show HG00099.hp1 HG01257.hp2 HG01891.hp2 HG01952.hp2 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp2 HG03098.hp2 HG03195.hp1 HG03195.hp2 HG03486.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03704.hp1 NA18906.hp2 NA19043.hp1 NA19077.hp1 NA19082.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0006 a0007 a0008 a0009 a0010 a0011	a0001c0001 a0001c0021 a0002c0007 others(7): Show a0001c0001 a0001c0021 a0002c0007 a0003c0002 a0006c0006 a0007c0016 a0008c0008 a0009c0010 a0010c0012 a0011c0014	a0001c0001t0001 a0001c0001t0002 a0001c0021t0001 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0021t0001 a0002c0007t0001 a0002c0007t0003 a0003c0002t0001 a0006c0006t0001 a0007c0016t0001 a0008c0008t0002 a0008c0008t0003 a0008c0008t0004 a0009c0010t0001 a0009c0010t0003 a0010c0012t0001 a0011c0014t0001	a0001c0001t0001g0184 a0001c0001t0002g0085 a0001c0021t0001g0182 others(22): Show a0001c0001t0001g0184 a0001c0001t0002g0085 a0001c0021t0001g0182 a0002c0007t0001g0129 a0002c0007t0003g0173 a0002c0007t0003g0246 a0003c0002t0001g0006 a0006c0006t0001g0174 a0006c0006t0001g0175 a0006c0006t0001g0245 a0007c0016t0001g0001 a0007c0016t0001g0252 a0008c0008t0002g0077 a0008c0008t0003g0005 a0008c0008t0003g0111 a0008c0008t0003g0168 a0008c0008t0003g0169 a0008c0008t0004g0087 a0009c0010t0001g0248 a0009c0010t0001g0249 a0009c0010t0001g0250 a0009c0010t0003g0244 a0010c0012t0001g0247 a0011c0014t0001g0002 a0011c0014t0001g0003	26	272	0.0956	-17	c.70- others(30): Show c.70-122_70-106delCAGTCTATATATGCAAA		LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	1/30					INFO_REALIGN_3_PRIME	chr13	TogoVar
LMO7_chr13_75631330_75864866	75861502	CTCAAAGG others(10): Show CTCAAAGGTTCAGTTGGG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG01243.hp2 others(2): Show HG01167.hp1 HG01169.hp1 HG01243.hp2 HG01433.hp1 HG02293.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0013c0017 a0001c0001 a0013c0017	a0001c0001t0002 a0013c0017t0002 a0001c0001t0002 a0013c0017t0002	a0001c0001t0002g0043 a0001c0001t0002g0265 a0013c0017t0002g0027 others(2): Show a0001c0001t0002g0043 a0001c0001t0002g0265 a0013c0017t0002g0027 a0013c0017t0002g0028 a0013c0017t0002g0037	5	272	0.0184	-17	c.35 others(28): Show c.3560_*3576delTCAAAGGTTCAGTTGGG		LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding					1637		chr13	TogoVar
LMOD2_chr7_123650866_123669290	123667470	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	1	396	0.0025	-17	c.37 others(28): Show c.3726_*3742delTTTTTTTTTTTTTTTTT		LMOD2	ENSG00000170807.12	transcript	ENST00000458573.3	protein_coding					3181		chr7	TogoVar
LMOD3_chr3_69101065_69127595	69107453	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00558.hp2 HG00673.hp2 others(22): Show HG00438.hp1 HG00558.hp2 HG00673.hp2 HG00735.hp1 HG02132.hp2 HG02615.hp2 HG02647.hp1 HG02723.hp2 HG03041.hp2 HG03239.hp1 HG06807.hp1 NA18942.hp2 NA18943.hp2 NA18945.hp2 NA18950.hp1 NA18966.hp1 NA18988.hp2 NA19009.hp2 NA19054.hp2 NA19056.hp1 NA19062.hp1 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0021 a0001c0001t0134 others(1): Show a0001c0001t0003 a0001c0001t0021 a0001c0001t0134 a0001c0001t0135	a0001c0001t0003g0064 a0001c0001t0003g0068 a0001c0001t0003g0069 others(22): Show a0001c0001t0003g0064 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0092 a0001c0001t0003g0096 a0001c0001t0003g0243 a0001c0001t0021g0066 a0001c0001t0021g0067 a0001c0001t0021g0083 a0001c0001t0021g0084 a0001c0001t0021g0088 a0001c0001t0134g0094 a0001c0001t0135g0093	25	428	0.0584	-17	c.16 others(28): Show c.1625_*1641delAAAAAAAAAAAAAAAAA		LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding	3/3				1625		chr3	TogoVar
LMTK3_chr19_48480271_48516835	48486047	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0003 a0003	a0003c0041 a0003c0041	a0003c0041t0001 a0003c0041t0001	a0003c0041t0001g0067 a0003c0041t0001g0067	1	314	0.0032	-17	c.436 others(34): Show c.4367-275_4367-259delAAAAAAAAAAAAAAAAA		LMTK3	ENSG00000142235.13	transcript	ENST00000600059.6	protein_coding	14/14						chr19	TogoVar
LMX1B_chr9_126608928_126706032	126611057	GGGTGTGT others(10): Show GGGTGTGTGTGTGTGTGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG03942.hp2 HG00738.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0067 a0001c0001t0066 a0001c0001t0067	a0001c0001t0066g0114 a0001c0001t0067g0121 a0001c0001t0066g0114 a0001c0001t0067g0121	2	342	0.0059	-17	c.-33 others(28): Show c.-3392_-3376delGGTGTGTGTGTGTGTGT		LMX1B	ENSG00000136944.19	transcript	ENST00000373474.9	protein_coding					2870		chr9	TogoVar
LNPEP_chr5_96931080_97042513	96982972	CAAGTCGT others(10): Show CAAGTCGTTTTTATTATA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp2 HG01884.hp1 others(10): Show HG01109.hp1 HG01243.hp2 HG01884.hp1 HG02451.hp2 HG02622.hp1 HG02630.hp2 HG02895.hp1 HG02897.hp1 HG03098.hp1 HG03225.hp1 HG03486.hp2 HG03540.hp1 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0007 a0001c0003t0065 a0001c0003t0068 a0001c0003t0007 a0001c0003t0065 a0001c0003t0068	a0001c0003t0007g0002 a0001c0003t0007g0229 a0001c0003t0007g0230 others(8): Show a0001c0003t0007g0002 a0001c0003t0007g0229 a0001c0003t0007g0230 a0001c0003t0007g0231 a0001c0003t0007g0234 a0001c0003t0007g0235 a0001c0003t0007g0236 a0001c0003t0007g0237 a0001c0003t0007g0239 a0001c0003t0065g0233 a0001c0003t0068g0240	13	352	0.0369	-17	c.861 others(34): Show c.861-2105_861-2089delGTCGTTTTTATTATAAA		LNPEP	ENSG00000113441.16	transcript	ENST00000231368.10	protein_coding	2/17					INFO_REALIGN_3_PRIME	chr5	TogoVar
LOC127933115_chrX_23778278_23788367	23781874	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	334	0.0030	-17	c.-14 others(28): Show c.-1403_-1387delAAAAAAAAAAAAAAAAA		LOC127933115	ENSG00000288706.1	transcript	ENST00000683890.1	protein_coding					1403		chrX	TogoVar
LOC128092248_chr9_130708626_130718724	130716072	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00423.hp2 others(198): Show HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01346.hp1 HG01358.hp1 HG01433.hp1 HG01884.hp1 HG01891.hp1 HG01928.hp2 HG01934.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02129.hp2 HG02145.hp2 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03710.hp2 HG03831.hp2 HG03927.hp2 HG04115.hp2 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18939.hp1 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18970.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp1 NA18974.hp2 NA18978.hp1 NA18978.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp1 NA18986.hp2 NA18988.hp2 NA18991.hp1 NA18991.hp2 NA18995.hp2 NA18999.hp2 NA19002.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20300.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0000 a0002c0002t0001g0000 a0001c0001t0001g0000 a0002c0002t0001g0000	201	424	0.4741	-17	c.23 others(28): Show c.2349_*2365delTTTTTTTTTTTTTTTTT		LOC128092248	ENSG00000288570.1	transcript	ENST00000674075.1	protein_coding					2349		chr9	TogoVar
LOC128125816_chr12_122221430_122231564	122226363	AGGGAGGC others(10): Show AGGGAGGCGGGGCCGGGC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG01123.hp2 HG01243.hp1 others(31): Show HG00735.hp2 HG01123.hp2 HG01243.hp1 HG01361.hp2 HG01516.hp2 HG01517.hp1 HG02258.hp1 HG02451.hp1 HG02602.hp2 HG02630.hp1 HG02683.hp2 HG02717.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02970.hp2 HG03017.hp2 HG03098.hp2 HG03453.hp2 HG03471.hp2 HG03540.hp1 HG03579.hp1 HG03688.hp1 HG03704.hp2 HG03831.hp1 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp2 NA18940.hp1 NA18972.hp2 NA19240.hp1 NA20805.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	34	372	0.0914	-17	c.50 others(24): Show c.50_*66delGCCCGGCCCCGCCTCCC		LOC128125816	ENSG00000284934.3	transcript	ENST00000713558.1	protein_coding					66		chr12	TogoVar
LOC128462377_chr16_89312046_89423292	89368371	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0048	1	366	0.0027	-17	c.9+4 others(32): Show c.9+49896_9+49912delAAAAAAAAAAAAAAAAA		LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1						chr16	TogoVar
LOC400499_chr16_11367015_11532247	11490417	AGTCCGGG others(10): Show AGTCCGGGCGCAGTGGCT	A A	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0232 a0232	a0232c0063 a0232c0063	a0232c0063t0001 a0232c0063t0001	a0232c0063t0001g0203 a0232c0063t0001g0203	1	310	0.0032	-17	c.172 others(36): Show c.1729+1267_1729+1283delAGCCACTGCGCCCGGAC		LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	13/66						chr16	TogoVar
LOC400499_chr16_11367015_11532247	11494098	GGGGAGGG others(10): Show GGGGAGGGGCAGTGGCGT	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0104 a0104	a0104c0036 a0104c0036	a0104c0036t0002 a0104c0036t0002	a0104c0036t0002g0296 a0104c0036t0002g0296	1	310	0.0032	-17	c.143 others(34): Show c.1432-319_1432-303delACGCCACTGCCCCTCCC		LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	11/66						chr16	TogoVar
LONP1_chr19_5686834_5725146	5715643	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp2 HG01070.hp1 others(21): Show HG00733.hp1 HG00735.hp2 HG01070.hp1 HG01071.hp2 HG01106.hp2 HG01346.hp2 HG01433.hp1 HG01884.hp2 HG01891.hp2 HG02602.hp2 HG02647.hp1 HG02738.hp1 HG03130.hp1 HG03209.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03704.hp2 HG03831.hp2 HG04228.hp2 NA18973.hp1 NA18988.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0016 a0023 a0001 a0016 a0023	a0001c0001 a0016c0012 a0023c0018 a0001c0001 a0016c0012 a0023c0018	a0001c0001t0001 a0001c0001t0002 a0016c0012t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0016c0012t0001 a0023c0018t0001	a0001c0001t0001g0003 a0001c0001t0001g0017 a0001c0001t0001g0032 others(20): Show a0001c0001t0001g0003 a0001c0001t0001g0017 a0001c0001t0001g0032 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0110 a0001c0001t0001g0313 a0001c0001t0001g0316 a0001c0001t0001g0355 a0001c0001t0002g0031 a0016c0012t0001g0012 a0023c0018t0001g0037	24	386	0.0622	-17	c.430 others(34): Show c.430-1389_430-1373delTTTTTTTTTTTTTTTTT		LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	1/17						chr19	TogoVar
LOXL3_chr2_74527258_74558942	74558687	CTGGGCAG others(10): Show CTGGGCAGCTGGGCTCTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	332	0.0030	-17	c.-48 others(28): Show c.-4841_-4825delCAGAGCCCAGCTGCCCA		LOXL3	ENSG00000115318.12	transcript	ENST00000264094.8	protein_coding					4746		chr2	TogoVar
LPAR1_chr9_110868263_111043470	110991574	TTTGTTTT others(10): Show TTTGTTTTGTTGTTGTTG	T T	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG02809.hp2 HG03139.hp2 others(1): Show HG01993.hp2 HG02809.hp2 HG03139.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0025 a0001c0002t0003 a0001c0001t0004 a0001c0001t0025 a0001c0002t0003	a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0025g0256 others(1): Show a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0025g0256 a0001c0002t0003g0092	4	302	0.0133	-17	c.-18 others(38): Show c.-181-18033_-181-18017delCAACAACAACAAAACAA		LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5						chr9	TogoVar
LPAR5_chr12_6613835_6640959	6630433	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG03130.hp2 HG02615.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0099 a0001c0001t0009g0100 a0001c0001t0009g0099 a0001c0001t0009g0100	2	406	0.0049	-17	c.-21 others(36): Show c.-217+5457_-217+5473delAAAAAAAAAAAAAAAAA		LPAR5	ENSG00000184574.10	transcript	ENST00000329858.9	protein_coding	1/1						chr12	TogoVar
LPCAT1_chr5_1456427_1528960	1507893	GAACTCCA others(10): Show GAACTCCACAAAACACAA	G G	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18970.hp2 NA19011.hp1 NA18956.hp1 NA18970.hp2 NA19011.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0006 a0001c0003 a0002c0006	a0001c0003t0016 a0002c0006t0038 a0001c0003t0016 a0002c0006t0038	a0001c0003t0016g0368 a0001c0003t0016g0369 a0002c0006t0038g0370 a0001c0003t0016g0368 a0001c0003t0016g0369 a0002c0006t0038g0370	3	386	0.0078	-17	c.136 others(34): Show c.136-6307_136-6291delTTGTGTTTTGTGGAGTT		LPCAT1	ENSG00000153395.10	transcript	ENST00000283415.4	protein_coding	1/13						chr5	TogoVar
LPCAT2_chr16_55504072_55591666	55552843	CAGGATGG others(10): Show CAGGATGGTAGTTGCTGA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp2 HG00609.hp2 others(55): Show HG00438.hp2 HG00597.hp2 HG00609.hp2 HG00733.hp1 HG01168.hp2 HG01891.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02083.hp1 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02451.hp1 HG02615.hp1 HG02647.hp2 HG02717.hp2 HG02723.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp2 HG03225.hp1 HG03490.hp1 HG03491.hp2 HG03579.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04199.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp2 NA18942.hp1 NA18949.hp1 NA18952.hp2 NA18953.hp2 NA18968.hp2 NA18971.hp2 NA18977.hp2 NA18978.hp2 NA18979.hp1 NA18993.hp1 NA18997.hp1 NA19000.hp1 NA19011.hp2 NA19074.hp1 NA19087.hp2 NA19091.hp1 NA19240.hp1 NA20300.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0003 a0002c0001 others(3): Show a0001c0002 a0001c0003 a0002c0001 a0002c0005 a0003c0004 a0003c0010	a0001c0002t0006 a0001c0002t0013 a0001c0002t0014 others(27): Show a0001c0002t0006 a0001c0002t0013 a0001c0002t0014 a0001c0002t0016 a0001c0002t0036 a0001c0002t0050 a0001c0003t0010 a0001c0003t0011 a0001c0003t0021 a0001c0003t0034 a0001c0003t0037 a0001c0003t0038 a0001c0003t0059 a0001c0003t0060 a0001c0003t0069 a0001c0003t0070 a0001c0003t0071 a0001c0003t0072 a0002c0001t0019 a0002c0001t0033 a0002c0005t0010 a0002c0005t0011 a0002c0005t0063 a0003c0004t0022 a0003c0004t0039 a0003c0004t0045 a0003c0004t0074 a0003c0004t0075 a0003c0004t0077 a0003c0010t0076	a0001c0002t0006g0082 a0001c0002t0013g0037 a0001c0002t0013g0040 others(52): Show a0001c0002t0006g0082 a0001c0002t0013g0037 a0001c0002t0013g0040 a0001c0002t0013g0041 a0001c0002t0014g0080 a0001c0002t0016g0081 a0001c0002t0016g0084 a0001c0002t0036g0011 a0001c0002t0050g0044 a0001c0003t0010g0034 a0001c0003t0010g0036 a0001c0003t0010g0063 a0001c0003t0010g0076 a0001c0003t0010g0077 a0001c0003t0010g0209 a0001c0003t0011g0030 a0001c0003t0011g0035 a0001c0003t0011g0042 a0001c0003t0011g0043 a0001c0003t0011g0057 a0001c0003t0011g0059 a0001c0003t0011g0061 a0001c0003t0011g0210 a0001c0003t0021g0056 a0001c0003t0021g0060 a0001c0003t0021g0062 a0001c0003t0021g0064 a0001c0003t0034g0031 a0001c0003t0034g0046 a0001c0003t0037g0207 a0001c0003t0037g0208 a0001c0003t0038g0032 a0001c0003t0038g0065 a0001c0003t0059g0079 a0001c0003t0060g0078 a0001c0003t0069g0196 a0001c0003t0070g0039 a0001c0003t0071g0038 a0001c0003t0072g0211 a0002c0001t0019g0143 a0002c0001t0033g0092 a0002c0005t0010g0021 a0002c0005t0010g0175 a0002c0005t0011g0134 a0002c0005t0063g0168 a0003c0004t0022g0022 a0003c0004t0022g0023 a0003c0004t0022g0213 a0003c0004t0039g0187 a0003c0004t0039g0188 a0003c0004t0045g0022 a0003c0004t0074g0189 a0003c0004t0075g0190 a0003c0004t0077g0192 a0003c0010t0076g0191	58	314	0.1847	-17	c.121 others(36): Show c.1215+1745_1215+1761delATGGTAGTTGCTGAAGG		LPCAT2	ENSG00000087253.13	transcript	ENST00000262134.10	protein_coding	11/13					INFO_REALIGN_3_PRIME	chr16	TogoVar
LPCAT2_chr16_55504072_55591666	55573658	TTATAATC others(10): Show TTATAATCAAGTACTTAC	T T	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0138 a0002c0001t0002g0138	1	314	0.0032	-17	c.121 others(34): Show c.1216-971_1216-955delATAATCAAGTACTTACT		LPCAT2	ENSG00000087253.13	transcript	ENST00000262134.10	protein_coding	11/13					INFO_REALIGN_3_PRIME	chr16	TogoVar
LPCAT3_chr12_6971185_7023476	6989725	AAGTGCTG others(10): Show AAGTGCTGTTTGTGTCAG	A A	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0007 a0007	a0007c0009 a0007c0009	a0007c0009t0002 a0007c0009t0002	a0007c0009t0002g0011 a0007c0009t0002g0011	1	282	0.0036	-17	c.152 others(34): Show c.152-6203_152-6187delCTGACACAAACAGCACT		LPCAT3	ENSG00000111684.11	transcript	ENST00000261407.9	protein_coding	1/12						chr12	TogoVar
LPIN1_chr2_11741632_11832409	11759123	GCTTTCTT others(10): Show GCTTTCTTTCTTTTCTTT	G G	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0093 a0001c0001t0011g0093	1	278	0.0036	-17	c.-9- others(32): Show c.-9-6397_-9-6381delTCTTTCTTTCTTTCTTT		LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20					INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN2_chr18_2911999_3018144	3013598	TGTTAAAG others(10): Show TGTTAAAGTGCAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02486.hp1 HG02572.hp1 others(7): Show HG02258.hp1 HG02486.hp1 HG02572.hp1 HG02723.hp2 HG02818.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG06807.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0019 a0001c0001t0023 a0001c0001t0029 others(6): Show a0001c0001t0019 a0001c0001t0023 a0001c0001t0029 a0001c0001t0039 a0001c0001t0073 a0001c0001t0082 a0001c0001t0117 a0001c0001t0125 a0001c0008t0128	a0001c0001t0019g0015 a0001c0001t0023g0235 a0001c0001t0029g0014 others(7): Show a0001c0001t0019g0015 a0001c0001t0023g0235 a0001c0001t0029g0014 a0001c0001t0039g0033 a0001c0001t0039g0034 a0001c0001t0073g0016 a0001c0001t0082g0017 a0001c0001t0117g0233 a0001c0001t0125g0232 a0001c0008t0128g0234	10	380	0.0263	-17	c.-53 others(26): Show c.-538_-522delTTTTTTTGCACTTTAAC		LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding					455		chr18	TogoVar
LPP_chr3_188149157_188895671	188441604	CTTTTCTT others(10): Show CTTTTCTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0068 a0001c0001t0025g0068	1	76	0.0132	-17	c.193 others(36): Show c.193+35296_193+35312delCTTTTTTTTTTTTTTTT		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11					INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188645277	AGAAATAA others(10): Show AGAAATAAGGAAGGGTTG	A A	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0013 a0002c0003t0013	a0002c0003t0013g0027 a0002c0003t0013g0027	1	76	0.0132	-17	c.111 others(38): Show c.1113+35436_1113+35452delAATAAGGAAGGGTTGGA		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	7/11					INFO_REALIGN_3_PRIME	chr3	TogoVar

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