Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRRC45_chr17_82018305_82036151	82021217	GGTCCAGC others(10): Show GGTCCAGCATCCCGGCTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp2 HG01169.hp1 HG01168.hp2 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	2	408	0.0049	-17	c.-24 others(28): Show c.-2426_-2410delGTCCAGCATCCCGGCTT	LRRC45	ENSG00000169683.8	transcript	ENST00000306688.8	protein_coding		2087		chr17	TogoVar
LRRC4B_chr19_50511892_50573435	50520234	AAAAAAAA others(10): Show AAAAAAAAAAAAAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01081.hp1 HG01433.hp2 others(19): Show HG00621.hp1 HG01081.hp1 HG01433.hp2 HG01884.hp1 HG01993.hp2 HG02071.hp2 HG02622.hp1 HG02647.hp2 HG02809.hp2 HG02818.hp1 HG02897.hp1 HG02970.hp1 HG03041.hp2 HG03130.hp2 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA18522.hp2 NA18954.hp2 NA19043.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 a0002c0004t0001	a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0084 others(19): Show a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0084 a0001c0001t0001g0133 a0001c0001t0001g0232 a0001c0001t0001g0256 a0001c0001t0001g0271 a0001c0003t0001g0053 a0001c0003t0001g0071 a0001c0003t0001g0088 a0001c0003t0001g0101 a0002c0002t0001g0086 a0002c0002t0001g0097 a0002c0002t0001g0119 a0002c0002t0001g0182 a0002c0002t0001g0269 a0002c0002t0001g0274 a0002c0002t0001g0277 a0002c0004t0001g0064 a0002c0004t0001g0092 a0002c0004t0001g0112 a0002c0004t0001g0320	22	360	0.0611	-17	c.298 others(32): Show c.298-836_298-820delCTTCTTTTTTTTTTTTT	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2			chr19	TogoVar
LRRC4C_chr11_40109209_41464652	40495813	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01261.hp1 HG01261.hp2 others(13): Show HG01074.hp2 HG01261.hp1 HG01261.hp2 HG02055.hp1 HG02698.hp2 HG02809.hp1 HG02896.hp2 HG02922.hp2 HG02970.hp2 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 NA18989.hp1 NA20129.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0013 others(13): Show a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0002g0009 a0001c0001t0002g0032 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0002t0001g0021 a0001c0002t0001g0022 a0001c0002t0001g0045 a0001c0002t0002g0012	16	48	0.3333	-17	c.-27 others(40): Show c.-270+152312_-270+152328delAAAAAAAAAAAAAAAAA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40665322	AAAAATAT others(10): Show AAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0018 a0001c0002t0001g0018	1	48	0.0208	-17	c.-40 others(38): Show c.-406-17061_-406-17045delATATATATATATATTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40987664	GAGATATA others(10): Show GAGATATAAATGATATAT	G G	intron_variant intron_variant	MODIFIER	HG02970.hp2 NA18989.hp2 HG02970.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0037 a0001c0001t0002g0009 a0001c0001t0001g0037 a0001c0001t0002g0009	2	48	0.0417	-17	c.-49 others(38): Show c.-495-53958_-495-53942delATATATCATTTATATCT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC53_chr1_74464376_74517611	74500603	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02129.hp2 HG02809.hp1 others(5): Show HG02083.hp2 HG02129.hp2 HG02809.hp1 HG02922.hp1 HG02970.hp2 HG03195.hp1 HG06807.hp1 NA18612.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0004 a0003c0005 others(1): Show a0001c0001 a0003c0004 a0003c0005 a0005c0006	a0001c0001t0001 a0003c0004t0001 a0003c0005t0001 others(1): Show a0001c0001t0001 a0003c0004t0001 a0003c0005t0001 a0005c0006t0001	a0001c0001t0001g0195 a0001c0001t0001g0321 a0003c0004t0001g0315 others(5): Show a0001c0001t0001g0195 a0001c0001t0001g0321 a0003c0004t0001g0315 a0003c0005t0001g0039 a0003c0005t0001g0040 a0003c0005t0001g0046 a0005c0006t0001g0198 a0005c0006t0001g0204	8	342	0.0234	-17	c.-27 others(36): Show c.-27+11906_-27+11922delTTTTTTTTTTTTTTTTT	LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4			chr1	TogoVar
LRRC69_chr8_91097619_91224257	91118351	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02004.hp1 NA18944.hp2 NA19002.hp2 HG02004.hp1 NA18944.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257	3	318	0.0094	-17	c.184 others(34): Show c.184-6115_184-6099delAAAAAAAAAAAAAAAAA	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC69_chr8_91097619_91224257	91222311	AAACAGAA others(10): Show AAACAGAAACAACTTGAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0275 a0002c0002t0001g0275	1	318	0.0031	-17	c.33 others(28): Show c.3312_*3328delAACAGAAACAACTTGAC	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding		3055		chr8	TogoVar
LRRC72_chr7_16521825_16586568	16540823	CTGAGGCC others(10): Show CTGAGGCCTTCCCAGCCA	C C	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	410	0.0024	-17	c.234 others(34): Show c.234+3130_234+3146delAGGCCTTCCCAGCCATG	LRRC72	ENSG00000205858.10	transcript	ENST00000401542.3	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr7	TogoVar
LRRC74A_chr14_76821408_76875304	76838470	TTTATCTA others(10): Show TTTATCTATCTTTGCAGC	T T	intron_variant intron_variant	MODIFIER	HG02293.hp2 HG03540.hp1 HG02293.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0075 a0001c0001t0003g0076	2	408	0.0049	-17	c.544 others(32): Show c.544+500_544+516delTTATCTATCTTTGCAGC	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding	5/13			chr14	TogoVar
LRRC7_chr1_69562922_70149364	69871065	AATGTTAT others(10): Show AATGTTATACCACAAATG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01515.hp2 HG02055.hp1 others(14): Show HG01243.hp2 HG01515.hp2 HG02055.hp1 HG02129.hp1 HG02735.hp2 HG03195.hp1 HG03710.hp2 HG04184.hp1 NA18966.hp1 NA18968.hp2 NA18977.hp2 NA18992.hp2 NA19000.hp1 NA19004.hp1 NA19080.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0021 a0001c0001t0030 a0001c0001t0035 a0001c0001t0037 a0001c0001t0038 a0001c0001t0041 a0001c0001t0072 a0001c0002t0059 a0001c0003t0020 a0001c0003t0028 a0001c0003t0084 a0001c0008t0024	a0001c0001t0001g0079 a0001c0001t0001g0087 a0001c0001t0003g0022 others(14): Show a0001c0001t0001g0079 a0001c0001t0001g0087 a0001c0001t0003g0022 a0001c0001t0003g0041 a0001c0001t0006g0081 a0001c0001t0021g0003 a0001c0001t0030g0077 a0001c0001t0035g0020 a0001c0001t0037g0016 a0001c0001t0038g0001 a0001c0001t0041g0002 a0001c0001t0072g0062 a0001c0002t0059g0105 a0001c0003t0020g0005 a0001c0003t0028g0014 a0001c0003t0084g0037 a0001c0008t0024g0107	17	108	0.1574	-17	c.647 others(36): Show c.647+32786_647+32802delTTATACCACAAATGATG	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	7/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69919955	AGGGGGCC others(10): Show AGGGGGCCCTTCCAGACT	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0029 a0001c0001t0026g0029	1	108	0.0093	-17	c.648 others(36): Show c.648-11525_648-11509delTCCAGACTGGGGGCCCT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	7/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8B_chr1_89519829_89602861	89541710	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0069	1	324	0.0031	-17	c.-24 others(38): Show c.-241+16711_-241+16727delAAAAAAAAAAAAAAAAA	LRRC8B	ENSG00000197147.15	transcript	ENST00000330947.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8D_chr1_89816032_89941611	89900417	TTTTCTTA others(10): Show TTTTCTTAGTTTGCCTGA	T T	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03453.hp2 NA19056.hp1 HG03195.hp2 HG03453.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0150 a0001c0001t0001g0203 a0001c0001t0009g0139 a0001c0001t0001g0150 a0001c0001t0001g0203 a0001c0001t0009g0139	3	210	0.0143	-17	c.-2- others(34): Show c.-2-32616_-2-32600delATTTCTTAGTTTGCCTG	LRRC8D	ENSG00000171492.14	transcript	ENST00000337338.9	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC9_chr14_59915144_60071817	59965882	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0116 a0001c0006t0002g0116	1	322	0.0031	-17	c.121 others(34): Show c.1212-685_1212-669delAAAAAAAAAAAAAAAAA	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding	10/32		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC9_chr14_59915144_60071817	59979536	CGGGAGGC others(10): Show CGGGAGGCAGAGCTTGTA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00642.hp1 HG00735.hp1 others(7): Show HG00323.hp2 HG00642.hp1 HG00735.hp1 HG01361.hp2 HG03710.hp2 HG04204.hp1 NA18946.hp2 NA18948.hp1 NA18962.hp2 NA19055.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0009 a0001c0004t0009	a0001c0004t0009g0209 a0001c0004t0009g0210 a0001c0004t0009g0302 others(7): Show a0001c0004t0009g0209 a0001c0004t0009g0210 a0001c0004t0009g0302 a0001c0004t0009g0303 a0001c0004t0009g0304 a0001c0004t0009g0305 a0001c0004t0009g0306 a0001c0004t0009g0307 a0001c0004t0009g0308 a0001c0004t0009g0309	10	322	0.0311	-17	c.187 others(36): Show c.1878+1406_1878+1422delGGAGGCAGAGCTTGTAG	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding	15/32		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRIQ3_chr1_74021015_74203176	74022362	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02080.hp2 NA18999.hp2 HG02080.hp2 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0059 a0001c0001t0002g0066 a0001c0001t0002g0059 a0001c0001t0002g0066	2	274	0.0073	-17	c.44 others(28): Show c.4434_*4450delTTTTTTTTTTTTTTTTT	LRRIQ3	ENSG00000162620.16	transcript	ENST00000354431.9	protein_coding		3652		chr1	TogoVar
LRRK1_chr15_100914357_101083257	100933821	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0006 a0006	a0006c0026 a0006c0026	a0006c0026t0021 a0006c0026t0021	a0006c0026t0021g0114 a0006c0026t0021g0114	1	338	0.0030	-17	c.97+ others(32): Show c.97+9108_97+9124delAAAAAAAAAAAAAAAAA	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	2/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRK1_chr15_100914357_101083257	100968707	CTTCCTTC others(10): Show CTTCCTTCCTTCCTCCCT	C C	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03540.hp2 HG03471.hp2 HG03540.hp2	a0001 a0016 a0001 a0016	a0001c0008 a0016c0053 a0001c0008 a0016c0053	a0001c0008t0051 a0016c0053t0009 a0001c0008t0051 a0016c0053t0009	a0001c0008t0051g0271 a0016c0053t0009g0106 a0001c0008t0051g0271 a0016c0053t0009g0106	2	338	0.0059	-17	c.98- others(32): Show c.98-5095_98-5079delTCCTTCCTTCCTCCCTT	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	2/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRK1_chr15_100914357_101083257	101047686	CCAGCCCG others(10): Show CCAGCCCGGGGCACGGAG	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02818.hp1 NA19030.hp1 others(2): Show HG02257.hp2 HG02818.hp1 NA19030.hp1 NA19240.hp1 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0024 a0001c0067 others(1): Show a0001c0002 a0001c0024 a0001c0067 a0001c0105	a0001c0002t0223 a0001c0024t0221 a0001c0024t0263 others(2): Show a0001c0002t0223 a0001c0024t0221 a0001c0024t0263 a0001c0067t0222 a0001c0105t0224	a0001c0002t0223g0085 a0001c0024t0221g0108 a0001c0024t0263g0137 others(2): Show a0001c0002t0223g0085 a0001c0024t0221g0108 a0001c0024t0263g0137 a0001c0067t0222g0095 a0001c0105t0224g0023	5	338	0.0148	-17	c.313 others(34): Show c.3136-806_3136-790delAGCCCGGGGCACGGAGC	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	21/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRN2_chr1_204612170_204690738	204631262	ATATATAT others(10): Show ATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 NA20805.hp1 HG02257.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0016 a0001c0001 a0001c0016	a0001c0001t0001 a0001c0016t0001 a0001c0001t0001 a0001c0016t0001	a0001c0001t0001g0222 a0001c0016t0001g0032 a0001c0001t0001g0222 a0001c0016t0001g0032	2	328	0.0061	-17	c.-22 others(38): Show c.-226-11061_-226-11045delATATATATATATATATA	LRRN2	ENSG00000170382.12	transcript	ENST00000367177.4	protein_coding	1/1			chr1	TogoVar
LRRN4_chr20_6035546_6059060	6039260	TTTGTGTG others(10): Show TTTGTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG01361.hp1 HG01515.hp2 others(2): Show HG00735.hp2 HG01361.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0028 a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0028	5	402	0.0124	-17	c.17 others(28): Show c.1745_*1761delCACACACACACACACAA	LRRN4	ENSG00000125872.9	transcript	ENST00000378858.5	protein_coding		1285		chr20	TogoVar
LRRTM1_chr2_80296878_80309752	80306395	TTTTCTTT others(10): Show TTTTCTTTTCTTTCTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp1 NA19086.hp2 HG03017.hp1 NA19086.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0006 a0002c0002t0001 a0002c0002t0006	a0002c0002t0001g0002 a0002c0002t0006g0013 a0002c0002t0001g0002 a0002c0002t0006g0013	2	418	0.0048	-17	c.-23 others(28): Show c.-2320_-2304delGAAAGAAAGAAAAGAAA	LRRTM1	ENSG00000162951.11	transcript	ENST00000295057.4	protein_coding		1644		chr2	TogoVar
LRRTM3_chr10_66921036_67106551	67100260	GGAACCAC others(10): Show GGAACCACAGCTCTGTGC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0014 a0002c0002t0014	a0002c0002t0014g0096 a0002c0002t0014g0096	1	294	0.0034	-17	c.24 others(28): Show c.2465_*2481delGAACCACAGCTCTGTGC	LRRTM3	ENSG00000198739.11	transcript	ENST00000361320.5	protein_coding	3/3	2465		chr10	TogoVar
LRRTM4_chr2_76742685_77527376	76816819	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00558.hp2 others(71): Show HG00438.hp1 HG00438.hp2 HG00558.hp2 HG00621.hp1 HG00621.hp2 HG00735.hp2 HG01074.hp2 HG01109.hp1 HG01109.hp2 HG01192.hp1 HG01346.hp1 HG01346.hp2 HG01496.hp2 HG01516.hp1 HG01884.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02258.hp2 HG02280.hp1 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02965.hp2 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03486.hp2 HG03490.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp2 HG03927.hp2 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18950.hp1 NA18951.hp2 NA18953.hp2 NA18961.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18970.hp2 NA18983.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA20129.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0012	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(71): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0038 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0076 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0107 a0001c0001t0001g0113 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0002g0007 a0001c0001t0002g0015 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0029 a0001c0001t0002g0035 a0001c0001t0002g0040 a0001c0001t0002g0049 a0001c0001t0002g0051 a0001c0001t0002g0077 a0001c0001t0002g0080 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0111 a0001c0001t0002g0114 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0121 a0001c0001t0002g0123 a0001c0001t0003g0033 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0054 a0001c0001t0003g0066 a0001c0001t0003g0074 a0001c0001t0003g0083 a0001c0001t0003g0088 a0001c0001t0003g0090 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0108 a0001c0001t0003g0112 a0001c0001t0003g0117 a0001c0001t0004g0010 a0001c0001t0004g0013 a0001c0001t0004g0025 a0001c0001t0004g0027 a0001c0001t0004g0037 a0001c0001t0004g0058 a0001c0001t0004g0094 a0001c0001t0004g0095 a0001c0001t0006g0034 a0001c0001t0007g0084 a0001c0001t0009g0055 a0001c0001t0012g0128	74	128	0.5781	-17	c.155 others(38): Show c.1552-67920_1552-67904delAAAAAAAAAAAAAAAAA	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRRTM4_chr2_76742685_77527376	77289372	ATTGTACC others(10): Show ATTGTACCCTTCATTAAC	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	128	0.0078	-17	c.155 others(40): Show c.1551+228929_1551+228945delGTTAATGAAGGGTACAA	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRRTM4_chr2_76742685_77527376	77469703	CTGTATAG others(10): Show CTGTATAGCATATATATA	C C	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0085 a0001c0001t0001g0085	1	128	0.0078	-17	c.155 others(38): Show c.1551+48598_1551+48614delTATATATATGCTATACA	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRSAM1_chr9_127446510_127508499	127466494	ATATATAT others(10): Show ATATATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19083.hp2 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0209 a0001c0001t0001g0209	1	340	0.0029	-17	c.529 others(34): Show c.529-1244_529-1228delATATATATATTTTTTTT	LRSAM1	ENSG00000148356.15	transcript	ENST00000300417.11	protein_coding	9/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
LRTM2_chr12_1815565_1841753	1816437	TTCCTGCC others(10): Show TTCCTGCCCCAGCGGGCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp2 HG01109.hp1 HG01952.hp1 others(17): Show HG01074.hp2 HG01109.hp1 HG01952.hp1 HG02055.hp1 HG02280.hp1 HG02559.hp1 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG03209.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(8): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0001t0014 a0001c0001t0023 a0001c0001t0026 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0059	a0001c0001t0002g0186 a0001c0001t0002g0380 a0001c0001t0003g0036 others(16): Show a0001c0001t0002g0186 a0001c0001t0002g0380 a0001c0001t0003g0036 a0001c0001t0003g0204 a0001c0001t0003g0262 a0001c0001t0003g0263 a0001c0001t0003g0389 a0001c0001t0005g0260 a0001c0001t0005g0265 a0001c0001t0011g0388 a0001c0001t0014g0264 a0001c0001t0023g0261 a0001c0001t0023g0285 a0001c0001t0026g0187 a0001c0001t0030g0281 a0001c0001t0030g0333 a0001c0001t0031g0386 a0001c0001t0032g0387 a0001c0001t0059g0282	20	462	0.0433	-17	c.-46 others(28): Show c.-4635_-4619delTCCTGCCCCAGCGGGCC	LRTM2	ENSG00000166159.11	transcript	ENST00000299194.6	protein_coding		4127		chr12	TogoVar
LRWD1_chr7_102459984_102478168	102461358	TGTTTGTT others(10): Show TGTTTGTTTGTTTGTTTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	1	428	0.0023	-17	c.-37 others(28): Show c.-3722_-3706delGTTTGTTTGTTTGTTTG	LRWD1	ENSG00000161036.13	transcript	ENST00000292616.10	protein_coding		3625		chr7	TogoVar
LRWD1_chr7_102459984_102478168	102465488	GCTTTTTT others(10): Show GCTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02109.hp1 HG02148.hp1 others(2): Show HG02055.hp2 HG02109.hp1 HG02148.hp1 HG03139.hp2 NA21309.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0005 a0002c0004 a0006c0011 a0001c0005 a0002c0004 a0006c0011	a0001c0005t0001 a0002c0004t0002 a0006c0011t0001 a0001c0005t0001 a0002c0004t0002 a0006c0011t0001	a0001c0005t0001g0101 a0001c0005t0001g0104 a0002c0004t0002g0100 others(2): Show a0001c0005t0001g0101 a0001c0005t0001g0104 a0002c0004t0002g0100 a0006c0011t0001g0102 a0006c0011t0001g0103	5	428	0.0117	-17	c.81- others(30): Show c.81-328_81-312delCTTTTTTTTTTTTTTTT	LRWD1	ENSG00000161036.13	transcript	ENST00000292616.10	protein_coding	1/14			chr7	TogoVar
LRWD1_chr7_102459984_102478168	102466760	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00733.hp2 HG00738.hp2 others(31): Show HG00099.hp2 HG00733.hp2 HG00738.hp2 HG01069.hp1 HG01099.hp1 HG01168.hp2 HG01175.hp2 HG01256.hp2 HG01361.hp2 HG01952.hp2 HG01978.hp2 HG02027.hp2 HG02056.hp1 HG02083.hp2 HG02129.hp1 HG02155.hp2 HG02735.hp2 HG03017.hp2 HG03490.hp2 HG03491.hp1 HG03942.hp2 HG04228.hp2 NA18747.hp1 NA18944.hp2 NA18945.hp2 NA18951.hp2 NA18952.hp1 NA18961.hp2 NA18968.hp2 NA18969.hp2 NA18971.hp1 NA18977.hp2 NA19009.hp2 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0003c0017 a0001c0003 a0003c0017	a0001c0003t0001 a0001c0003t0002 a0003c0017t0001 a0001c0003t0001 a0001c0003t0002 a0003c0017t0001	a0001c0003t0001g0004 a0001c0003t0001g0008 a0001c0003t0001g0016 others(16): Show a0001c0003t0001g0004 a0001c0003t0001g0008 a0001c0003t0001g0016 a0001c0003t0001g0027 a0001c0003t0001g0061 a0001c0003t0001g0069 a0001c0003t0001g0070 a0001c0003t0001g0071 a0001c0003t0001g0072 a0001c0003t0001g0073 a0001c0003t0001g0074 a0001c0003t0001g0080 a0001c0003t0001g0087 a0001c0003t0001g0088 a0001c0003t0001g0092 a0001c0003t0001g0093 a0001c0003t0001g0094 a0001c0003t0002g0067 a0003c0017t0001g0068	34	428	0.0794	-17	c.432 others(32): Show c.432+511_432+527delTTTTTTTTTTTTTTTTT	LRWD1	ENSG00000161036.13	transcript	ENST00000292616.10	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
LSM12_chr17_44029328_44071671	44039365	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0029 a0001c0001t0014g0029	1	298	0.0034	-17	c.368 others(32): Show c.368+765_368+781delAAAAAAAAAAAAAAAAA	LSM12	ENSG00000161654.10	transcript	ENST00000293406.8	protein_coding	3/4			chr17	TogoVar
LSM12_chr17_44029328_44071671	44041279	AAAAAAAA others(10): Show AAAAAAAAACAAACACAC	A A	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0162	1	298	0.0034	-17	c.259 others(34): Show c.259-1040_259-1024delGTGTGTTTGTTTTTTTT	LSM12	ENSG00000161654.10	transcript	ENST00000293406.8	protein_coding	2/4			chr17	TogoVar
LSM12_chr17_44029328_44071671	44041283	AAAAACAA others(10): Show AAAAACAAACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0279 a0001c0001t0008g0279	1	298	0.0034	-17	c.259 others(34): Show c.259-1044_259-1028delGTGTGTGTGTTTGTTTT	LSM12	ENSG00000161654.10	transcript	ENST00000293406.8	protein_coding	2/4			chr17	TogoVar
LSM14A_chr19_34167504_34234288	34192632	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01981.hp2 HG02056.hp1 others(6): Show HG00738.hp2 HG01981.hp2 HG02056.hp1 HG02257.hp1 HG02738.hp1 HG04115.hp1 NA18945.hp1 NA18991.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 others(5): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0031 a0001c0001t0033	a0001c0001t0002g0014 a0001c0001t0004g0013 a0001c0001t0009g0042 others(6): Show a0001c0001t0002g0014 a0001c0001t0004g0013 a0001c0001t0009g0042 a0001c0001t0009g0060 a0001c0001t0016g0039 a0001c0001t0017g0067 a0001c0001t0018g0120 a0001c0001t0031g0045 a0001c0001t0033g0075	9	315	0.0286	-17	c.122 others(34): Show c.122-1827_122-1811delAAAAAAAAAAAAAAAAA	LSM14A	ENSG00000257103.9	transcript	ENST00000544216.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
LSM3_chr3_14173817_14206122	14194775	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0159 a0001c0001t0034g0159	1	396	0.0025	-17	c.229 others(34): Show c.229-3250_229-3234delTTTTTTTTTTTTTTTTT	LSM3	ENSG00000170860.4	transcript	ENST00000306024.4	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
LSP1_chr11_1848084_1897263	1873813	AGCAGAGG others(10): Show AGCAGAGGAGGGAGGCCG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 NA18946.hp2 NA19085.hp2 HG00438.hp2 NA18946.hp2 NA19085.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0018 a0002c0001t0001g0076 a0002c0001t0001g0018 a0002c0001t0001g0076	3	360	0.0083	-17	c.54- others(32): Show c.54-6241_54-6225delCGGCAGAGGAGGGAGGC	LSP1	ENSG00000130592.17	transcript	ENST00000311604.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
LSP1_chr11_1848084_1897263	1873871	GAGGGAGG others(10): Show GAGGGAGGCTGGCAGAGC	G G	intron_variant intron_variant	MODIFIER	NA18948.hp2 NA18948.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0142 a0002c0005t0001g0142	1	360	0.0028	-17	c.54- others(32): Show c.54-6209_54-6193delGCTGGCAGAGCAGGGAG	LSP1	ENSG00000130592.17	transcript	ENST00000311604.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
LSR_chr19_35244002_35272964	35250167	CACTGGTC others(10): Show CACTGGTCCTGGCAATTA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02083.hp1 HG02129.hp2 others(8): Show HG00544.hp1 HG02083.hp1 HG02129.hp2 HG03491.hp2 HG03492.hp1 NA18978.hp1 NA18986.hp1 NA18992.hp2 NA18997.hp2 NA19003.hp1 NA19081.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0055 a0002c0001t0001g0056 a0002c0001t0001g0206 others(6): Show a0002c0001t0001g0055 a0002c0001t0001g0056 a0002c0001t0001g0206 a0002c0001t0001g0207 a0002c0001t0001g0208 a0002c0001t0001g0209 a0002c0001t0001g0210 a0002c0001t0001g0211 a0002c0001t0001g0212	11	438	0.0251	-17	c.110 others(32): Show c.110-146_110-130delCTGGTCCTGGCAATTAA	LSR	ENSG00000105699.17	transcript	ENST00000605618.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
LSS_chr21_46183446_46233774	46183499	AGGGGAGA others(10): Show AGGGGAGACCAGCTTGCG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp2 HG01071.hp2 HG01243.hp1 others(5): Show HG01070.hp2 HG01071.hp2 HG01243.hp1 HG01256.hp1 HG01258.hp2 HG02738.hp2 NA20129.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0026 a0001c0004t0003 a0001c0004t0026	a0001c0004t0003g0003 a0001c0004t0003g0007 a0001c0004t0003g0144 others(1): Show a0001c0004t0003g0003 a0001c0004t0003g0007 a0001c0004t0003g0144 a0001c0004t0026g0140	8	358	0.0224	-17	c.75 others(28): Show c.7588_*7604delCGCAAGCTGGTCTCCCC	LSS	ENSG00000160285.15	transcript	ENST00000397728.8	protein_coding		4946		chr21	TogoVar
LSS_chr21_46183446_46233774	46183956	GGAGGAGA others(10): Show GGAGGAGACCAGTCTTGC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00544.hp2 others(84): Show HG00140.hp1 HG00323.hp1 HG00544.hp2 HG00558.hp2 HG00609.hp2 HG00639.hp1 HG00642.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01074.hp2 HG01123.hp2 HG01192.hp1 HG01346.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp2 HG01928.hp1 HG01952.hp2 HG01975.hp1 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02132.hp2 HG02273.hp1 HG02559.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02818.hp1 HG03017.hp1 HG03017.hp2 HG03490.hp2 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG04228.hp2 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18951.hp1 NA18954.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp2 NA18965.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18975.hp2 NA18979.hp1 NA18987.hp1 NA18991.hp1 NA18998.hp1 NA18999.hp2 NA19005.hp1 NA19009.hp1 NA19012.hp1 NA19064.hp1 NA19065.hp1 NA19066.hp2 NA19068.hp2 NA19072.hp1 NA19078.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19082.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0012 a0015 a0017	a0001c0001 a0001c0004 a0001c0005 others(11): Show a0001c0001 a0001c0004 a0001c0005 a0002c0002 a0002c0015 a0002c0016 a0002c0019 a0002c0025 a0002c0027 a0002c0029 a0003c0003 a0012c0020 a0015c0028 a0017c0031	a0001c0001t0001 a0001c0004t0003 a0001c0005t0006 others(15): Show a0001c0001t0001 a0001c0004t0003 a0001c0005t0006 a0002c0002t0002 a0002c0002t0013 a0002c0002t0021 a0002c0002t0022 a0002c0002t0029 a0002c0015t0002 a0002c0016t0002 a0002c0019t0002 a0002c0025t0002 a0002c0027t0002 a0002c0029t0002 a0003c0003t0001 a0012c0020t0002 a0015c0028t0013 a0017c0031t0002	a0001c0001t0001g0026 a0001c0004t0003g0024 a0001c0005t0006g0262 others(66): Show a0001c0001t0001g0026 a0001c0004t0003g0024 a0001c0005t0006g0262 a0002c0002t0002g0002 a0002c0002t0002g0006 a0002c0002t0002g0013 a0002c0002t0002g0014 a0002c0002t0002g0015 a0002c0002t0002g0017 a0002c0002t0002g0018 a0002c0002t0002g0019 a0002c0002t0002g0060 a0002c0002t0002g0062 a0002c0002t0002g0063 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0070 a0002c0002t0002g0071 a0002c0002t0002g0072 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0076 a0002c0002t0002g0077 a0002c0002t0002g0078 a0002c0002t0002g0082 a0002c0002t0002g0085 a0002c0002t0002g0088 a0002c0002t0002g0090 a0002c0002t0002g0092 a0002c0002t0002g0093 a0002c0002t0002g0096 a0002c0002t0002g0097 a0002c0002t0002g0098 a0002c0002t0002g0099 a0002c0002t0002g0102 a0002c0002t0002g0103 a0002c0002t0002g0104 a0002c0002t0002g0105 a0002c0002t0002g0106 a0002c0002t0002g0107 a0002c0002t0002g0108 a0002c0002t0002g0109 a0002c0002t0002g0114 a0002c0002t0002g0115 a0002c0002t0002g0116 a0002c0002t0002g0119 a0002c0002t0002g0120 a0002c0002t0002g0266 a0002c0002t0013g0083 a0002c0002t0013g0084 a0002c0002t0021g0061 a0002c0002t0022g0080 a0002c0002t0029g0081 a0002c0015t0002g0089 a0002c0015t0002g0091 a0002c0016t0002g0111 a0002c0016t0002g0112 a0002c0019t0002g0045 a0002c0025t0002g0117 a0002c0027t0002g0094 a0002c0029t0002g0101 a0003c0003t0001g0222 a0012c0020t0002g0113 a0015c0028t0013g0100 a0017c0031t0002g0110	87	358	0.2430	-17	c.71 others(28): Show c.7131_*7147delGCAAGACTGGTCTCCTC	LSS	ENSG00000160285.15	transcript	ENST00000397728.8	protein_coding		4489		chr21	TogoVar
LTBP1_chr2_32941953_33404509	33277759	CCCTTTCT others(10): Show CCCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00438.hp1 HG00741.hp2 others(16): Show HG00280.hp1 HG00438.hp1 HG00741.hp2 HG01123.hp1 HG01258.hp1 HG01978.hp2 HG02622.hp1 HG02683.hp2 HG02735.hp2 HG03239.hp2 HG03704.hp1 HG03710.hp1 HG03927.hp2 HG04204.hp1 NA18944.hp1 NA18953.hp2 NA18979.hp2 NA19085.hp2 NA20752.hp2	a0001 a0013 a0001 a0013	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0010 a0001c0014 a0001c0026 a0013c0023	a0001c0001t0009 a0001c0002t0006 a0001c0004t0004 others(12): Show a0001c0001t0009 a0001c0002t0006 a0001c0004t0004 a0001c0004t0015 a0001c0004t0018 a0001c0004t0034 a0001c0004t0035 a0001c0004t0041 a0001c0010t0001 a0001c0010t0002 a0001c0010t0018 a0001c0014t0001 a0001c0014t0002 a0001c0026t0002 a0013c0023t0002	a0001c0001t0009g0050 a0001c0002t0006g0125 a0001c0004t0004g0119 others(16): Show a0001c0001t0009g0050 a0001c0002t0006g0125 a0001c0004t0004g0119 a0001c0004t0015g0010 a0001c0004t0015g0013 a0001c0004t0015g0015 a0001c0004t0018g0086 a0001c0004t0018g0138 a0001c0004t0034g0009 a0001c0004t0035g0012 a0001c0004t0041g0133 a0001c0010t0001g0005 a0001c0010t0001g0112 a0001c0010t0002g0098 a0001c0010t0018g0140 a0001c0014t0001g0024 a0001c0014t0002g0032 a0001c0026t0002g0016 a0013c0023t0002g0029	19	164	0.1159	-17	c.299 others(36): Show c.2992+1838_2992+1854delCTTTCTTTCTTTCTTTC	LTBP1	ENSG00000049323.16	transcript	ENST00000404816.7	protein_coding	18/33		INFO_REALIGN_3_PRIME	chr2	TogoVar
LTBP1_chr2_32941953_33404509	33382074	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01081.hp1 HG01258.hp1 others(5): Show HG00741.hp2 HG01081.hp1 HG01258.hp1 HG01884.hp2 HG03098.hp2 HG03239.hp2 HG03491.hp1 NA20752.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0008 a0001c0014 a0009c0037	a0001c0001t0007 a0001c0002t0001 a0001c0004t0015 others(3): Show a0001c0001t0007 a0001c0002t0001 a0001c0004t0015 a0001c0008t0008 a0001c0014t0001 a0009c0037t0005	a0001c0001t0007g0001 a0001c0002t0001g0059 a0001c0004t0015g0010 others(5): Show a0001c0001t0007g0001 a0001c0002t0001g0059 a0001c0004t0015g0010 a0001c0004t0015g0013 a0001c0004t0015g0015 a0001c0008t0008g0075 a0001c0014t0001g0024 a0009c0037t0005g0116	8	164	0.0488	-17	c.471 others(36): Show c.4712-7088_4712-7072delTTTTTTTTTTTTTTTTT	LTBP1	ENSG00000049323.16	transcript	ENST00000404816.7	protein_coding	31/33		INFO_REALIGN_3_PRIME	chr2	TogoVar
LTBP1_chr2_32941953_33404509	33400916	AAAAAAAA others(10): Show AAAAAAAAAAAAAAAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp1 HG03139.hp2 HG03471.hp2 others(1): Show HG02451.hp1 HG03139.hp2 HG03471.hp2 NA19030.hp1	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0048 a0002c0009 a0012c0041 a0001c0048 a0002c0009 a0012c0041	a0001c0048t0010 a0002c0009t0001 a0012c0041t0008 a0001c0048t0010 a0002c0009t0001 a0012c0041t0008	a0001c0048t0010g0092 a0002c0009t0001g0157 a0002c0009t0001g0158 others(1): Show a0001c0048t0010g0092 a0002c0009t0001g0157 a0002c0009t0001g0158 a0012c0041t0008g0078	4	164	0.0244	-17	c.23 others(28): Show c.2372_*2388delAAAAAAAAAAAAAAAAG	LTBP1	ENSG00000049323.16	transcript	ENST00000404816.7	protein_coding		1408		chr2	TogoVar
LTBP4_chr19_40596369_40634818	40625275	TATATATA others(10): Show TATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03654.hp1 NA18943.hp2 HG03654.hp1 NA18943.hp2	a0002 a0002	a0002c0042 a0002c0045 a0002c0042 a0002c0045	a0002c0042t0001 a0002c0045t0001 a0002c0042t0001 a0002c0045t0001	a0002c0042t0001g0035 a0002c0045t0001g0281 a0002c0042t0001g0035 a0002c0045t0001g0281	2	338	0.0059	-17	c.383 others(34): Show c.3833-581_3833-565delATATATATATATATATA	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29			chr19	TogoVar
LTBP4_chr19_40596369_40634818	40625277	TATATATA others(10): Show TATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01993.hp1 HG02970.hp1 others(1): Show HG00544.hp2 HG01993.hp1 HG02970.hp1 NA19091.hp2	a0002 a0019 a0002 a0019	a0002c0002 a0019c0047 a0002c0002 a0019c0047	a0002c0002t0001 a0019c0047t0001 a0002c0002t0001 a0019c0047t0001	a0002c0002t0001g0034 a0002c0002t0001g0232 a0002c0002t0001g0279 others(1): Show a0002c0002t0001g0034 a0002c0002t0001g0232 a0002c0002t0001g0279 a0019c0047t0001g0227	4	338	0.0118	-17	c.383 others(34): Show c.3833-579_3833-563delATATATATATATATATA	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29			chr19	TogoVar
LTBP4_chr19_40596369_40634818	40625279	TATATATA others(10): Show TATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0002 a0002	a0002c0046 a0002c0046	a0002c0046t0001 a0002c0046t0001	a0002c0046t0001g0237 a0002c0046t0001g0237	1	338	0.0030	-17	c.383 others(34): Show c.3833-577_3833-561delATATATATATATATATA	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29			chr19	TogoVar
LTBP4_chr19_40596369_40634818	40625281	TATATATA others(10): Show TATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02717.hp1 HG02809.hp1 others(4): Show HG02280.hp2 HG02717.hp1 HG02809.hp1 HG02965.hp1 HG03139.hp2 HG03486.hp1 HG04228.hp2	a0001 a0002 a0001 a0002	a0001c0006 a0002c0002 a0001c0006 a0002c0002	a0001c0006t0003 a0002c0002t0001 a0001c0006t0003 a0002c0002t0001	a0001c0006t0003g0014 a0001c0006t0003g0124 a0001c0006t0003g0291 others(3): Show a0001c0006t0003g0014 a0001c0006t0003g0124 a0001c0006t0003g0291 a0001c0006t0003g0292 a0001c0006t0003g0308 a0002c0002t0001g0296	7	338	0.0207	-17	c.383 others(34): Show c.3833-575_3833-559delATATATATATATATATA	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29			chr19	TogoVar
LTBP4_chr19_40596369_40634818	40625283	TATATATA others(10): Show TATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0278 a0002c0002t0001g0278	1	338	0.0030	-17	c.383 others(34): Show c.3833-573_3833-557delATATATATATATATATA	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29			chr19	TogoVar

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