Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LARP1B_chr4_128056312_128216988	128073572	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01891.hp1 HG02055.hp2 others(1): Show HG00735.hp1 HG01891.hp1 HG02055.hp2 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0007 a0002c0002t0002 a0002c0002t0013 a0001c0001t0007 a0002c0002t0002 a0002c0002t0013	a0001c0001t0007g0258 a0002c0002t0002g0024 a0002c0002t0002g0095 others(1): Show a0001c0001t0007g0258 a0002c0002t0002g0024 a0002c0002t0002g0095 a0002c0002t0013g0093	4	336	0.0119	-18	c.-77 others(33): Show c.-77-868_-77-851delTTTTTTTTTTTTTTTTTT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128129164	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(132): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00423.hp2 HG00438.hp1 HG00558.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00738.hp1 HG00741.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02056.hp1 HG02074.hp1 HG02080.hp2 HG02083.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp2 HG02273.hp2 HG02300.hp1 HG02523.hp1 HG02572.hp2 HG02602.hp1 HG02630.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp1 HG02922.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04228.hp1 HG04228.hp2 NA18747.hp2 NA18941.hp2 NA18942.hp2 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp2 NA18959.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18974.hp1 NA18980.hp1 NA18983.hp2 NA18985.hp1 NA18986.hp2 NA18989.hp1 NA18991.hp2 NA18998.hp1 NA19000.hp1 NA19004.hp1 NA19004.hp2 NA19007.hp2 NA19012.hp1 NA19054.hp1 NA19056.hp1 NA19057.hp1 NA19062.hp1 NA19066.hp1 NA19068.hp2 NA19074.hp2 NA19078.hp1 NA19085.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp1	a0001 a0003 a0010 others(3): Show a0001 a0003 a0010 a0011 a0012 a0014	a0001c0001 a0001c0018 a0003c0004 others(4): Show a0001c0001 a0001c0018 a0003c0004 a0010c0015 a0011c0014 a0012c0016 a0014c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0014 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0014 a0001c0018t0003 a0003c0004t0001 a0010c0015t0001 a0011c0014t0003 a0012c0016t0003 a0014c0010t0003	a0001c0001t0001g0001 a0001c0001t0001g0107 a0001c0001t0001g0108 others(132): Show a0001c0001t0001g0001 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0129 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0236 a0001c0001t0001g0249 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0265 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0003g0102 a0001c0001t0003g0111 a0001c0001t0003g0125 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0214 a0001c0001t0003g0216 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0224 a0001c0001t0003g0227 a0001c0001t0003g0228 a0001c0001t0003g0229 a0001c0001t0003g0230 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0235 a0001c0001t0003g0237 a0001c0001t0003g0238 a0001c0001t0003g0240 a0001c0001t0003g0241 a0001c0001t0003g0242 a0001c0001t0003g0244 a0001c0001t0003g0245 a0001c0001t0003g0246 a0001c0001t0003g0248 a0001c0001t0003g0250 a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0253 a0001c0001t0003g0255 a0001c0001t0003g0256 a0001c0001t0003g0257 a0001c0001t0003g0278 a0001c0001t0003g0279 a0001c0001t0003g0280 a0001c0001t0014g0151 a0001c0018t0003g0254 a0003c0004t0001g0172 a0003c0004t0001g0182 a0003c0004t0001g0183 a0003c0004t0001g0189 a0003c0004t0001g0264 a0010c0015t0001g0206 a0011c0014t0003g0226 a0012c0016t0003g0277 a0014c0010t0003g0223	135	336	0.4018	-18	c.152 others(37): Show c.1524+6999_1524+7016delAAAAAAAAAAAAAAAAAA	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	11/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128176224	TATATATA others(11): Show TATATATACATTTATATAA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0005 a0002c0012t0005	a0002c0012t0005g0098 a0002c0012t0005g0098	1	336	0.0030	-18	c.164 others(35): Show c.1649-630_1649-613delAATATATACATTTATATA	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	12/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP4B_chr10_804497_936705	869904	AAATAATA others(11): Show AAATAATAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01257.hp1 HG01258.hp1 others(1): Show HG01256.hp1 HG01257.hp1 HG01258.hp1 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0036 a0001c0001t0001g0037 others(1): Show a0001c0001t0001g0025 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0043	4	288	0.0139	-18	c.142 others(35): Show c.142-5652_142-5635delATTATTATTATTATTATT	LARP4B	ENSG00000107929.16	transcript	ENST00000316157.8	protein_coding	3/17			chr10	TogoVar
LARP4B_chr10_804497_936705	896034	CGCAGGAG others(11): Show CGCAGGAGAAGCTGCCCAT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0140 a0001c0001t0010g0140	1	288	0.0035	-18	c.-39 others(37): Show c.-39-10292_-39-10275delATGGGCAGCTTCTCCTGC	LARP4B	ENSG00000107929.16	transcript	ENST00000316157.8	protein_coding	1/17			chr10	TogoVar
LARP4_chr12_50395885_50485004	50422781	ATATTATT others(11): Show ATATTATTATTATTATTAT	A A	intron_variant intron_variant	MODIFIER	HG02818.hp1 NA20905.hp1 HG02818.hp1 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0181 a0003c0003t0001g0179 a0001c0001t0001g0181 a0003c0003t0001g0179	2	318	0.0063	-18	c.19- others(33): Show c.19-4946_19-4929delATTATTATTATTATTATT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50436051	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA18975.hp2 NA19070.hp1 NA18975.hp2 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0121 a0001c0001t0002g0125 a0001c0001t0002g0121 a0001c0001t0002g0125	2	318	0.0063	-18	c.535 others(33): Show c.535+451_535+468delGTGTGTGTGTGTGTGTGT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARS1_chr5_146108034_146187650	146140858	CACACACA others(11): Show CACACACACACATATATAT	C C	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	284	0.0035	-18	c.209 others(35): Show c.2091-615_2091-598delATATATATGTGTGTGTGT	LARS1	ENSG00000133706.20	transcript	ENST00000394434.7	protein_coding	20/31			chr5	TogoVar
LARS1_chr5_146108034_146187650	146174467	TATATATA others(11): Show TATATATATATATATATCC	T T	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG01175.hp2 others(17): Show HG01070.hp2 HG01071.hp1 HG01175.hp2 HG01192.hp2 HG01346.hp2 HG01358.hp2 HG01515.hp1 HG01516.hp1 HG01978.hp1 HG02027.hp1 HG02135.hp2 HG02257.hp1 HG02300.hp1 HG02559.hp1 HG02602.hp1 HG02683.hp2 HG03017.hp1 HG04228.hp2 NA18951.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 a0001c0005t0001	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0073 others(17): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0073 a0001c0001t0001g0076 a0001c0001t0001g0091 a0001c0001t0001g0107 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0138 a0001c0001t0007g0017 a0001c0001t0007g0051 a0001c0001t0008g0075 a0001c0001t0008g0117 a0001c0005t0001g0052 a0001c0005t0001g0074 a0001c0005t0001g0112 a0001c0005t0001g0115 a0001c0005t0001g0116	20	284	0.0704	-18	c.126 others(35): Show c.126-1711_126-1694delGGATATATATATATATAT	LARS1	ENSG00000133706.20	transcript	ENST00000394434.7	protein_coding	2/31			chr5	TogoVar
LARS2_chr3_45383576_45554407	45415876	TAGAGAGA others(11): Show TAGAGAGAGAGAGAGAGGG	T T	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01891.hp1 HG02280.hp1 others(16): Show HG01074.hp1 HG01891.hp1 HG02280.hp1 HG02451.hp1 HG02717.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02922.hp2 HG03041.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19030.hp2 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0012 others(1): Show a0001c0002 a0001c0003 a0001c0012 a0002c0006	a0001c0002t0004 a0001c0003t0002 a0001c0003t0011 others(2): Show a0001c0002t0004 a0001c0003t0002 a0001c0003t0011 a0001c0012t0006 a0002c0006t0001	a0001c0002t0004g0022 a0001c0003t0002g0079 a0001c0003t0002g0086 others(16): Show a0001c0002t0004g0022 a0001c0003t0002g0079 a0001c0003t0002g0086 a0001c0003t0002g0087 a0001c0003t0002g0088 a0001c0003t0002g0089 a0001c0003t0002g0090 a0001c0003t0002g0193 a0001c0003t0002g0198 a0001c0003t0002g0236 a0001c0003t0002g0237 a0001c0003t0011g0183 a0001c0003t0011g0184 a0001c0012t0006g0208 a0002c0006t0001g0210 a0002c0006t0001g0235 a0002c0006t0001g0238 a0002c0006t0001g0239 a0002c0006t0001g0240	19	242	0.0785	-18	c.364 others(35): Show c.364-1589_364-1572delGGAGAGAGAGAGAGAGAG	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	4/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45535758	ACACACAC others(11): Show ACACACACACCCCCACACC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00609.hp1 others(81): Show HG00099.hp2 HG00140.hp1 HG00609.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG01070.hp2 HG01081.hp1 HG01081.hp2 HG01167.hp2 HG01169.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01891.hp2 HG01978.hp2 HG02004.hp2 HG02056.hp1 HG02109.hp2 HG02148.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02300.hp2 HG02451.hp2 HG02602.hp2 HG02622.hp2 HG02683.hp1 HG02717.hp1 HG02738.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG03017.hp1 HG03139.hp2 HG03225.hp2 HG03453.hp1 HG03490.hp1 HG03491.hp2 HG03516.hp1 HG03540.hp1 HG03669.hp1 HG03710.hp1 HG03831.hp2 HG03927.hp1 HG04115.hp1 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18952.hp2 NA18957.hp2 NA18964.hp1 NA18966.hp2 NA18968.hp2 NA18971.hp2 NA18972.hp1 NA18973.hp2 NA18982.hp2 NA18983.hp2 NA18995.hp1 NA19002.hp2 NA19009.hp2 NA19012.hp2 NA19030.hp1 NA19054.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19068.hp2 NA19074.hp1 NA19075.hp2 NA19084.hp2 NA19087.hp1 NA19090.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0001c0010 a0001c0015 others(1): Show a0001c0002 a0001c0010 a0001c0015 a0006c0023	a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 others(7): Show a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0010 a0001c0002t0012 a0001c0002t0018 a0001c0002t0019 a0001c0010t0020 a0001c0015t0001 a0006c0023t0001	a0001c0002t0001g0019 a0001c0002t0001g0025 a0001c0002t0001g0028 others(81): Show a0001c0002t0001g0019 a0001c0002t0001g0025 a0001c0002t0001g0028 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0057 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0064 a0001c0002t0001g0065 a0001c0002t0001g0066 a0001c0002t0001g0100 a0001c0002t0001g0104 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0115 a0001c0002t0001g0116 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0122 a0001c0002t0001g0124 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0129 a0001c0002t0001g0134 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0195 a0001c0002t0001g0197 a0001c0002t0001g0200 a0001c0002t0001g0211 a0001c0002t0001g0212 a0001c0002t0001g0213 a0001c0002t0001g0215 a0001c0002t0001g0218 a0001c0002t0001g0219 a0001c0002t0001g0220 a0001c0002t0001g0221 a0001c0002t0001g0222 a0001c0002t0001g0223 a0001c0002t0001g0224 a0001c0002t0001g0225 a0001c0002t0001g0226 a0001c0002t0001g0227 a0001c0002t0001g0230 a0001c0002t0001g0231 a0001c0002t0001g0232 a0001c0002t0001g0234 a0001c0002t0001g0241 a0001c0002t0001g0242 a0001c0002t0003g0068 a0001c0002t0003g0140 a0001c0002t0003g0141 a0001c0002t0003g0142 a0001c0002t0003g0162 a0001c0002t0004g0022 a0001c0002t0004g0165 a0001c0002t0004g0207 a0001c0002t0010g0101 a0001c0002t0010g0229 a0001c0002t0012g0190 a0001c0002t0018g0228 a0001c0002t0019g0102 a0001c0010t0020g0189 a0001c0015t0001g0123 a0006c0023t0001g0135	84	242	0.3471	-18	c.240 others(37): Show c.2405-6066_2405-6049delCACACCCCCACACCCACA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	20/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LAS1L_chrX_65507582_65539787	65516636	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18985.hp2 NA18988.hp1 others(4): Show NA18955.hp1 NA18985.hp2 NA18988.hp1 NA18998.hp2 NA19003.hp1 NA19085.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0108 a0001c0001t0001g0128 others(4): Show a0001c0001t0001g0080 a0001c0001t0001g0108 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132	7	203	0.0345	-18	c.192 others(37): Show c.1927+1333_1927+1350delGTGTGTGTGTGTGTGTGT	LAS1L	ENSG00000001497.18	transcript	ENST00000374811.8	protein_coding	12/13			chrX	TogoVar
LAS1L_chrX_65507582_65539787	65538510	ATATATAT others(11): Show ATATATATATATATATATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0134 a0002c0004t0001g0134	1	203	0.0049	-18	c.-38 others(29): Show c.-3813_-3796delAATATATATATATATATA	LAS1L	ENSG00000001497.18	transcript	ENST00000374811.8	protein_coding		3724		chrX	TogoVar
LAT2_chr7_74205006_74234834	74214519	TATATAAA others(11): Show TATATAAATATATATATGA	T T	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0242	1	344	0.0029	-18	c.-21 others(35): Show c.-218-297_-218-280delAATATATATATGAATATA	LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
LAT2_chr7_74205006_74234834	74214605	TATATAAA others(11): Show TATATAAATATATATATGA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02145.hp2 HG02723.hp1 others(2): Show HG01109.hp2 HG02145.hp2 HG02723.hp1 HG03453.hp2 NA18955.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0081 a0001c0001t0001g0095 a0001c0001t0001g0214 others(2): Show a0001c0001t0001g0081 a0001c0001t0001g0095 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0257	5	344	0.0145	-18	c.-21 others(35): Show c.-218-211_-218-194delAATATATATATGAATATA	LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
LAT2_chr7_74205006_74234834	74219009	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00558.hp1 HG00609.hp1 others(23): Show HG00280.hp1 HG00558.hp1 HG00609.hp1 HG00621.hp1 HG00673.hp1 HG01123.hp1 HG02015.hp1 HG02056.hp1 HG02165.hp1 HG02280.hp1 HG02451.hp1 HG02523.hp2 HG02647.hp1 HG02698.hp1 HG02886.hp1 HG02965.hp2 HG03017.hp1 HG03942.hp2 HG04115.hp1 NA18522.hp1 NA18945.hp1 NA18955.hp1 NA18999.hp2 NA19010.hp1 NA19056.hp2 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0009 a0001c0003t0001 a0001c0001t0001 a0001c0001t0009 a0001c0003t0001	a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0001g0026 others(23): Show a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0153 a0001c0001t0009g0044 a0001c0003t0001g0029 a0001c0003t0001g0031	26	344	0.0756	-18	c.135 others(33): Show c.135-714_135-697delTTTTTTTTTTTTTTTTTT	LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
LATS2_chr13_20968036_21066586	20969685	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0005 a0004c0004t0005	a0004c0004t0005g0256 a0004c0004t0005g0256	1	316	0.0032	-18	c.51 others(29): Show c.5167_*5184delATATATTTTTTTTTTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3350		chr13	TogoVar
LATS2_chr13_20968036_21066586	20969689	AAAAAAAA others(11): Show AAAAAAAAAATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0005 a0004c0004t0005	a0004c0004t0005g0002 a0004c0004t0005g0002	1	316	0.0032	-18	c.51 others(29): Show c.5163_*5180delATATATATATTTTTTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3346		chr13	TogoVar
LATS2_chr13_20968036_21066586	20969691	AAAAAAAA others(11): Show AAAAAAAATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp1 HG03942.hp1 HG01361.hp1 HG03942.hp1	a0004 a0005 a0004 a0005	a0004c0004 a0005c0016 a0004c0004 a0005c0016	a0004c0004t0005 a0005c0016t0005 a0004c0004t0005 a0005c0016t0005	a0004c0004t0005g0261 a0005c0016t0005g0235 a0004c0004t0005g0261 a0005c0016t0005g0235	2	316	0.0063	-18	c.51 others(29): Show c.5161_*5178delATATATATATATTTTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3344		chr13	TogoVar
LATS2_chr13_20968036_21066586	20969693	AAAAAATA others(11): Show AAAAAATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0058 a0003c0005t0002g0058	1	316	0.0032	-18	c.51 others(29): Show c.5159_*5176delATATATATATATATTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3342		chr13	TogoVar
LATS2_chr13_20968036_21066586	20969697	AATATATA others(11): Show AATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG02056.hp2 NA18945.hp1 others(4): Show HG00280.hp2 HG02056.hp2 NA18945.hp1 NA18950.hp2 NA18970.hp1 NA19002.hp1 NA19007.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0006 a0001c0001 a0002c0006	a0001c0001t0001 a0001c0001t0022 a0002c0006t0004 a0001c0001t0001 a0001c0001t0022 a0002c0006t0004	a0001c0001t0001g0232 a0001c0001t0001g0239 a0001c0001t0001g0241 others(4): Show a0001c0001t0001g0232 a0001c0001t0001g0239 a0001c0001t0001g0241 a0001c0001t0001g0245 a0001c0001t0001g0279 a0001c0001t0022g0171 a0002c0006t0004g0258	7	316	0.0222	-18	c.51 others(29): Show c.5155_*5172delATATATATATATATATAT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3338		chr13	TogoVar
LATS2_chr13_20968036_21066586	21023666	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01167.hp1 HG01358.hp2 others(2): Show HG01070.hp1 HG01167.hp1 HG01358.hp2 HG01934.hp2 NA18946.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0017 a0003c0003t0002 a0001c0001t0001 a0001c0001t0017 a0003c0003t0002	a0001c0001t0001g0197 a0001c0001t0001g0209 a0001c0001t0001g0265 others(2): Show a0001c0001t0001g0197 a0001c0001t0001g0209 a0001c0001t0001g0265 a0001c0001t0017g0131 a0003c0003t0002g0170	5	316	0.0158	-18	c.342 others(37): Show c.342+22001_342+22018delGTTTTTTTTTTTTTTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7			chr13	TogoVar
LAYN_chr11_111535720_111566745	111564617	AACACACA others(11): Show AACACACACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp1 HG02055.hp2 HG02257.hp1 others(10): Show HG01099.hp1 HG02055.hp2 HG02257.hp1 HG02257.hp2 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG03209.hp1 HG03471.hp2 HG03669.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0003 a0008c0011 a0001c0001 a0001c0003 a0008c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0003t0001 a0008c0011t0001	a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0020 others(9): Show a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0002g0061 a0001c0001t0003g0123 a0001c0001t0007g0019 a0001c0001t0009g0052 a0001c0001t0009g0053 a0001c0003t0001g0066 a0008c0011t0001g0112	13	298	0.0436	-18	c.41 others(29): Show c.4160_*4177delACACACACACACACACAC	LAYN	ENSG00000204381.12	transcript	ENST00000375614.7	protein_coding		2873		chr11	TogoVar
LBP_chr20_38341482_38382013	38356418	GCGCACAC others(11): Show GCGCACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02071.hp1 HG02615.hp2 others(2): Show HG02055.hp2 HG02071.hp1 HG02615.hp2 HG02630.hp1 HG03139.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0014 a0004c0018 a0001c0001 a0001c0014 a0004c0018	a0001c0001t0001 a0001c0014t0001 a0001c0014t0003 others(1): Show a0001c0001t0001 a0001c0014t0001 a0001c0014t0003 a0004c0018t0001	a0001c0001t0001g0267 a0001c0014t0001g0336 a0001c0014t0003g0091 others(2): Show a0001c0001t0001g0267 a0001c0014t0001g0336 a0001c0014t0003g0091 a0004c0018t0001g0335 a0004c0018t0001g0343	5	394	0.0127	-18	c.588 others(35): Show c.588+1011_588+1028delGCACACACACACACACAC	LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr20	TogoVar
LBP_chr20_38341482_38382013	38365705	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0018 a0018	a0018c0022 a0018c0022	a0018c0022t0001 a0018c0022t0001	a0018c0022t0001g0340 a0018c0022t0001g0340	1	394	0.0025	-18	c.921 others(33): Show c.921+955_921+972delAAAAAAAAAAAATATATA	LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding	8/14		INFO_REALIGN_3_PRIME	chr20	TogoVar
LBP_chr20_38341482_38382013	38365707	AAAAAAAA others(11): Show AAAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0001 a0002c0012t0001	a0002c0012t0001g0342 a0002c0012t0001g0342	1	394	0.0025	-18	c.921 others(33): Show c.921+957_921+974delAAAAAAAAAATATATATA	LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding	8/14		INFO_REALIGN_3_PRIME	chr20	TogoVar
LBP_chr20_38341482_38382013	38378081	TCCTCTCC others(11): Show TCCTCTCCCTCTCCCTCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp2 HG00735.hp1 HG01192.hp2 others(38): Show HG00733.hp2 HG00735.hp1 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01346.hp1 HG01515.hp2 HG01978.hp1 HG01993.hp2 HG02055.hp1 HG02257.hp2 HG02602.hp1 HG02647.hp2 HG02698.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02922.hp1 HG02965.hp1 HG03130.hp2 HG03225.hp2 HG03486.hp1 HG03491.hp2 HG03516.hp1 HG03540.hp2 HG03688.hp2 HG03704.hp2 HG03927.hp2 HG04115.hp1 HG04199.hp2 HG04204.hp1 NA18612.hp2 NA18942.hp2 NA18951.hp1 NA18966.hp1 NA18969.hp2 NA18983.hp2 NA18987.hp1 NA19009.hp2 NA19060.hp1 NA20752.hp2	a0001 a0002 a0009 others(1): Show a0001 a0002 a0009 a0013	a0001c0001 a0001c0002 a0001c0023 others(7): Show a0001c0001 a0001c0002 a0001c0023 a0001c0027 a0002c0007 a0002c0009 a0002c0010 a0002c0012 a0009c0021 a0013c0028	a0001c0001t0001 a0001c0002t0001 a0001c0023t0001 others(7): Show a0001c0001t0001 a0001c0002t0001 a0001c0023t0001 a0001c0027t0001 a0002c0007t0001 a0002c0009t0001 a0002c0010t0001 a0002c0012t0001 a0009c0021t0001 a0013c0028t0001	a0001c0001t0001g0155 a0001c0002t0001g0235 a0001c0002t0001g0236 others(31): Show a0001c0001t0001g0155 a0001c0002t0001g0235 a0001c0002t0001g0236 a0001c0002t0001g0256 a0001c0002t0001g0290 a0001c0002t0001g0309 a0001c0002t0001g0311 a0001c0023t0001g0324 a0001c0027t0001g0293 a0002c0007t0001g0011 a0002c0007t0001g0013 a0002c0007t0001g0034 a0002c0007t0001g0035 a0002c0007t0001g0036 a0002c0007t0001g0037 a0002c0007t0001g0038 a0002c0007t0001g0040 a0002c0007t0001g0041 a0002c0007t0001g0317 a0002c0007t0001g0318 a0002c0009t0001g0002 a0002c0009t0001g0005 a0002c0009t0001g0016 a0002c0009t0001g0078 a0002c0009t0001g0079 a0002c0010t0001g0031 a0002c0010t0001g0106 a0002c0010t0001g0108 a0002c0010t0001g0109 a0002c0010t0001g0196 a0002c0010t0001g0197 a0002c0012t0001g0285 a0009c0021t0001g0053 a0013c0028t0001g0032	41	394	0.1041	-18	c.14 others(29): Show c.1413_*1430delCCTCTCCCTCTCCCTCTC	LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding		1069		chr20	TogoVar
LCE1B_chr1_152806971_152818108	152807076	AGAGTGTG others(11): Show AGAGTGTGTGTGTGTGTGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00423.hp2 HG01109.hp1 others(23): Show HG00140.hp2 HG00423.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp1 HG01243.hp1 HG01261.hp1 HG01496.hp1 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02015.hp1 HG02083.hp1 HG02559.hp1 HG02723.hp1 HG02895.hp1 HG03225.hp1 HG06807.hp2 NA18612.hp2 NA18945.hp1 NA18954.hp1 NA18974.hp1 NA18986.hp1 NA18998.hp1 NA19078.hp2 NA20129.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0000 a0003c0003t0001g0000 a0001c0001t0001g0000 a0003c0003t0001g0000	26	440	0.0591	-18	c.-53 others(29): Show c.-5370_-5353delGAGTGTGTGTGTGTGTGT	LCE1B	ENSG00000196734.9	transcript	ENST00000360090.4	protein_coding		4894		chr1	TogoVar
LCE1C_chr1_152799832_152811651	152807076	AGAGTGTG others(11): Show AGAGTGTGTGTGTGTGTGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00423.hp2 HG00733.hp1 others(27): Show HG00140.hp2 HG00423.hp2 HG00733.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01261.hp2 HG01496.hp2 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02015.hp1 HG02083.hp2 HG02559.hp2 HG02723.hp1 HG02895.hp1 HG03225.hp2 HG04115.hp2 NA18945.hp2 NA18954.hp1 NA18966.hp1 NA18986.hp1 NA18986.hp2 NA18998.hp1 NA19070.hp2 NA19075.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0003 a0001c0001t0001 a0001c0003t0003	a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0003t0003g0003 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0003t0003g0003 a0001c0003t0003g0007 a0001c0003t0003g0026	30	422	0.0711	-18	c.-51 others(27): Show c.-514_-497delACACACACACACACACTC	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding		426		chr1	TogoVar
LCE4A_chr1_152703160_152714434	152710010	CTCTCTGT others(11): Show CTCTCTGTGTGTGTGTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02622.hp1 HG02723.hp2 others(2): Show HG02572.hp1 HG02622.hp1 HG02723.hp2 HG02896.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0001 a0001c0001t0004g0001	5	416	0.0120	-18	c.63 others(27): Show c.636_*653delTCTCTGTGTGTGTGTGTG	LCE4A	ENSG00000187170.6	transcript	ENST00000368777.2	protein_coding		577		chr1	TogoVar
LCK_chr1_32246265_32291165	32272573	AAGAGAGA others(11): Show AAGAGAGAGAGAGAAAGAG	A A	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01516.hp1 HG01517.hp1 HG01255.hp2 HG01516.hp1 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0130 a0001c0001t0001g0261 a0001c0001t0001g0124 a0001c0001t0001g0130 a0001c0001t0001g0261	3	274	0.0110	-18	c.-5- others(33): Show c.-5-1702_-5-1685delAAGAGAGAGAGAGAGAGA	LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCK_chr1_32246265_32291165	32272632	AGAGAGAG others(11): Show AGAGAGAGAGAGAGAGAGC	A A	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0037 a0001c0001t0006g0037	1	274	0.0037	-18	c.-5- others(33): Show c.-5-1685_-5-1668delAGAGAGAGAGCGAGAGAG	LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCLAT1_chr2_30442246_30649225	30534219	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0203 a0001c0001t0001g0203	1	366	0.0027	-18	c.364 others(33): Show c.364+943_364+960delGTGTGTGTGTGTGTGTGT	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30607845	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0014	a0001c0003t0014g0231 a0001c0003t0014g0231	1	366	0.0027	-18	c.629 others(37): Show c.629-32234_629-32217delGTGTGTGTGTGTGTGTGT	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
LCN15_chr9_136754634_136769518	136760525	GGCCAGTG others(11): Show GGCCAGTGTCCCTCCAGAC	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0001 a0003c0007t0001	a0003c0007t0001g0064 a0003c0007t0001g0064	1	356	0.0028	-18	c.33 others(33): Show c.33-760_*33-743delGTCTGGAGGGACACTGGC	LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding	6/6			chr9	TogoVar
LCN15_chr9_136754634_136769518	136769500	CCCCCCCG others(11): Show CCCCCCCGCCACCCCGCCA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG02145.hp1 HG02559.hp2 HG01109.hp1 HG02145.hp1 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0023 a0001c0003t0001g0007 a0001c0001t0001g0023 a0001c0003t0001g0007	3	356	0.0084	-18	c.-50 others(29): Show c.-5030_-5013delTGGCGGGGTGGCGGGGGG	LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding		4983		chr9	TogoVar
LCNL1_chr9_136977993_136990758	136978718	AGGGGCGG others(11): Show AGGGGCGGGGTCATCTCCT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp2 HG02165.hp2 NA18953.hp2 others(5): Show HG02129.hp2 HG02165.hp2 NA18953.hp2 NA18957.hp1 NA18973.hp2 NA18993.hp2 NA19009.hp1 NA19085.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	8	382	0.0209	-18	c.-48 others(29): Show c.-4868_-4851delGGGGCGGGGTCATCTCCT	LCNL1	ENSG00000214402.7	transcript	ENST00000408973.3	protein_coding		4274		chr9	TogoVar
LCOR_chr10_96827298_97000956	96920617	TATATATG others(11): Show TATATATGTATGTACATTC	T T	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0008 a0008	a0008c0016 a0008c0016	a0008c0016t0146 a0008c0016t0146	a0008c0016t0146g0007 a0008c0016t0146g0007	1	288	0.0035	-18	c.-18 others(39): Show c.-184+12879_-184+12896delATGTACATTCATATATGT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCP1_chr13_46120923_46187177	46145908	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02976.hp2 NA18975.hp1 NA18991.hp1 HG02976.hp2 NA18975.hp1 NA18991.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0369 a0001c0001t0002g0114 a0001c0001t0003g0040 a0001c0001t0001g0369 a0001c0001t0002g0114 a0001c0001t0003g0040	3	382	0.0079	-18	c.117 others(35): Show c.1174+982_1174+999delTTTTTTTTTTTTTTTTTT	LCP1	ENSG00000136167.15	transcript	ENST00000323076.7	protein_coding	10/15			chr13	TogoVar
LCP2_chr5_170241233_170302777	170290992	GAAAGAAA others(11): Show GAAAGAAAGAGAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp2 NA18966.hp2 others(1): Show HG01109.hp1 HG01109.hp2 NA18966.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006	a0001c0001t0001 a0001c0002t0007 a0001c0004t0002 others(1): Show a0001c0001t0001 a0001c0002t0007 a0001c0004t0002 a0001c0006t0001	a0001c0001t0001g0350 a0001c0002t0007g0233 a0001c0004t0002g0210 others(1): Show a0001c0001t0001g0350 a0001c0002t0007g0233 a0001c0004t0002g0210 a0001c0006t0001g0214	4	384	0.0104	-18	c.141 others(35): Show c.141+2300_141+2317delTTCTTTCTCTCTTTCTTT	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	2/20			chr5	TogoVar
LCTL_chr15_66542532_66570998	66544135	TAATCCCA others(11): Show TAATCCCAGCTACTCAGGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 HG06807.hp2 HG03453.hp2 HG06807.hp2	a0001 a0008 a0001 a0008	a0001c0012 a0008c0010 a0001c0012 a0008c0010	a0001c0012t0003 a0008c0010t0001 a0001c0012t0003 a0008c0010t0001	a0001c0012t0003g0248 a0008c0010t0001g0227 a0001c0012t0003g0248 a0008c0010t0001g0227	2	434	0.0046	-18	c.43 others(29): Show c.4337_*4354delTCCTGAGTAGCTGGGATT	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		3396		chr15	TogoVar
LCTL_chr15_66542532_66570998	66568822	GCACACAC others(11): Show GCACACACACACACACACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp2 NA18998.hp2 HG00621.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0021	2	434	0.0046	-18	c.-30 others(29): Show c.-3006_-2989delTGTGTGTGTGTGTGTGTG	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2825		chr15	TogoVar
LCTL_chr15_66542532_66570998	66568865	CACACACA others(11): Show CACACACACACATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG02698.hp1 NA19072.hp2 HG01891.hp2 HG02698.hp1 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0136 a0001c0001t0001g0163 a0001c0001t0001g0001 a0001c0001t0001g0136 a0001c0001t0001g0163	3	434	0.0069	-18	c.-30 others(29): Show c.-3049_-3032delATATATATGTGTGTGTGT	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2868		chr15	TogoVar
LCTL_chr15_66542532_66570998	66568869	CACACACA others(11): Show CACACACATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0226 a0002c0002t0001g0226	1	434	0.0023	-18	c.-30 others(29): Show c.-3053_-3036delATATATATATATGTGTGT	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2872		chr15	TogoVar
LCTL_chr15_66542532_66570998	66568871	CACACATA others(11): Show CACACATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG02071.hp2 HG02735.hp1 others(5): Show HG01256.hp1 HG02071.hp2 HG02735.hp1 NA18945.hp2 NA18991.hp1 NA18997.hp1 NA19043.hp2 NA19057.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0010 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0133 a0002c0002t0001g0053 a0002c0002t0001g0231 a0002c0002t0001g0232 a0002c0002t0002g0229	8	434	0.0184	-18	c.-30 others(29): Show c.-3055_-3038delATATATATATATATGTGT	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2874		chr15	TogoVar
LCTL_chr15_66542532_66570998	66568873	CACATATA others(11): Show CACATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0216 a0002c0002t0001g0216	1	434	0.0023	-18	c.-30 others(29): Show c.-3057_-3040delATATATATATATATATGT	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2876		chr15	TogoVar
LCT_chr2_135782850_135842184	135785690	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0281 a0001c0001t0001g0281	1	366	0.0027	-18	c.26 others(29): Show c.2616_*2633delAAAAAAAAAAAAAAAAAA	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding		2159		chr2	TogoVar
LCT_chr2_135782850_135842184	135835482	GTATATAT others(11): Show GTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA18957.hp2 NA18972.hp2 NA18992.hp1 NA18957.hp2 NA18972.hp2 NA18992.hp1	a0001 a0002 a0001 a0002	a0001c0011 a0002c0023 a0001c0011 a0002c0023	a0001c0011t0001 a0002c0023t0001 a0001c0011t0001 a0002c0023t0001	a0001c0011t0001g0134 a0002c0023t0001g0161 a0002c0023t0001g0175 a0001c0011t0001g0134 a0002c0023t0001g0161 a0002c0023t0001g0175	3	366	0.0082	-18	c.640 others(35): Show c.640+1030_640+1047delTATATATATATATATATA	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	1/16			chr2	TogoVar
LCT_chr2_135782850_135842184	135835998	ATATATAT others(11): Show ATATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00423.hp2 HG00544.hp1 others(105): Show HG00280.hp1 HG00423.hp2 HG00544.hp1 HG00621.hp2 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01099.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp2 HG01256.hp2 HG01257.hp1 HG01261.hp2 HG01346.hp2 HG01496.hp1 HG01515.hp2 HG01884.hp1 HG01928.hp1 HG01975.hp1 HG01981.hp1 HG01993.hp2 HG02015.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp2 HG02135.hp1 HG02148.hp2 HG02165.hp1 HG02258.hp2 HG02293.hp1 HG02300.hp2 HG02559.hp2 HG02683.hp2 HG02698.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp2 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG03669.hp1 HG03688.hp1 HG03704.hp2 HG03834.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp2 NA18939.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp2 NA18944.hp2 NA18950.hp2 NA18952.hp1 NA18954.hp2 NA18956.hp2 NA18959.hp2 NA18960.hp1 NA18967.hp1 NA18969.hp1 NA18971.hp1 NA18974.hp1 NA18982.hp2 NA18983.hp1 NA18990.hp2 NA18993.hp1 NA18994.hp2 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19007.hp2 NA19054.hp2 NA19056.hp2 NA19057.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19067.hp2 NA19070.hp2 NA19072.hp1 NA19078.hp1 NA19079.hp2 NA19082.hp2 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19091.hp2 NA20805.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0044 a0001c0045 others(4): Show a0001c0001 a0001c0044 a0001c0045 a0001c0047 a0002c0015 a0002c0046 a0002c0048	a0001c0001t0001 a0001c0001t0008 a0001c0044t0001 others(5): Show a0001c0001t0001 a0001c0001t0008 a0001c0044t0001 a0001c0045t0001 a0001c0047t0001 a0002c0015t0001 a0002c0046t0001 a0002c0048t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(75): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0236 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0290 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0008g0264 a0001c0044t0001g0291 a0001c0045t0001g0238 a0001c0047t0001g0284 a0002c0015t0001g0288 a0002c0015t0001g0289 a0002c0015t0001g0296 a0002c0015t0001g0297 a0002c0046t0001g0307 a0002c0048t0001g0241	108	366	0.2951	-18	c.640 others(33): Show c.640+514_640+531delCATATATATATATATATA	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	1/16			chr2	TogoVar
LDB1_chr10_102101489_102125368	102106541	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0070 a0001c0001t0046g0070	1	376	0.0027	-18	c.15 others(29): Show c.1534_*1551delTTTTTTTTTTTTTTTTTT	LDB1	ENSG00000198728.11	transcript	ENST00000673968.1	protein_coding	11/11	1534		chr10	TogoVar

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