view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LDB1_chr10_102101489_102125368 | 102123613 | CACCTCTC others(11): Show |
C | upstream_gene_variant | MODIFIER | HG00642.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0082 | 1 | 376 | 0.0027 | -18 | c.-35 others(29): Show |
LDB1 | ENSG00000198728.11 | transcript | ENST00000673968.1 | protein_coding | 3246 | chr10 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16563429 | ATTTTTTT others(11): Show |
A | intron_variant | MODIFIER | HG00735.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0129 | 1 | 162 | 0.0062 | -18 | c.615 others(37): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 5/7 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16570462 | CAAAAAAA others(11): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG02129.hp1 HG02132.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0027 a0001c0001t0001g0059 a0001c0001t0001g0063 others(6): Show |
9 | 162 | 0.0556 | -18 | c.615 others(37): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 5/7 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16592465 | CATATATA others(11): Show |
C | intron_variant | MODIFIER | HG03831.hp1 NA20905.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0102 a0001c0001t0003g0068 |
2 | 162 | 0.0124 | -18 | c.408 others(35): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 3/7 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16755512 | TGTGTGTG others(11): Show |
T | intron_variant | MODIFIER | HG02897.hp2 HG03453.hp1 HG03540.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0032 a0001c0001t0001g0155 |
3 | 162 | 0.0185 | -18 | c.235 others(35): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 2/7 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16755533 | GAGAGAGA others(11): Show |
G | intron_variant | MODIFIER | HG01433.hp2 HG03540.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0137 a0001c0001t0003g0066 |
2 | 162 | 0.0124 | -18 | c.235 others(35): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 2/7 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16897928 | ATATATAT others(11): Show |
A | intron_variant | MODIFIER | HG01243.hp2 HG02809.hp2 HG02897.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0005a0001c0002t0001 | a0001c0001t0001g0070 a0001c0001t0001g0143 a0001c0001t0005g0144 others(1): Show |
4 | 162 | 0.0247 | -18 | c.132 others(33): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 1/7 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16898835 | GGGGAGAG others(11): Show |
G | upstream_gene_variant | MODIFIER | HG01496.hp2 HG02698.hp1 HG04228.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0025 others(3): Show |
6 | 162 | 0.0370 | -18 | c.-36 others(27): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 191 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16898837 | GGAGAGAG others(11): Show |
G | upstream_gene_variant | MODIFIER | HG03195.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0099 | 1 | 162 | 0.0062 | -18 | c.-37 others(27): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 193 | chr4 | TogoVar | |||||||
LDB3_chr10_86663511_86741072 | 86736742 | TCACTCAC others(11): Show |
T | downstream_gene_variant | MODIFIER | HG02723.hp2 HG03540.hp2 NA18998.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0050a0002c0002t0001 | a0001c0001t0001g0021 a0001c0001t0050g0129 a0002c0002t0001g0090 |
3 | 332 | 0.0090 | -18 | c.*37 others(29): Show |
LDB3 | ENSG00000122367.21 | transcript | ENST00000361373.9 | protein_coding | 671 | chr10 | TogoVar | |||||||
LDHAL6A_chr11_18450856_18484601 | 18453598 | GTGTGTGT others(11): Show |
G | upstream_gene_variant | MODIFIER | HG00741.hp2 HG02135.hp2 HG02451.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(1): Show | a0001c0001t0001g0013 a0001c0001t0001g0122 a0001c0001t0005g0134 others(6): Show |
9 | 420 | 0.0214 | -18 | c.-30 others(29): Show |
LDHAL6A | ENSG00000166800.11 | transcript | ENST00000280706.3 | protein_coding | 2257 | chr11 | TogoVar | |||||||
LDHAL6A_chr11_18450856_18484601 | 18453600 | GTGTGTAT others(11): Show |
G | upstream_gene_variant | MODIFIER | HG03669.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0005 | 1 | 420 | 0.0024 | -18 | c.-30 others(29): Show |
LDHAL6A | ENSG00000166800.11 | transcript | ENST00000280706.3 | protein_coding | 2255 | chr11 | TogoVar | |||||||
LDHAL6A_chr11_18450856_18484601 | 18468031 | ATATATAC others(11): Show |
A | intron_variant | MODIFIER | HG02071.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0168 | 1 | 420 | 0.0024 | -18 | c.418 others(35): Show |
LDHAL6A | ENSG00000166800.11 | transcript | ENST00000280706.3 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDHAL6A_chr11_18450856_18484601 | 18468044 | TATACGTA others(11): Show |
T | intron_variant | MODIFIER | HG01243.hp1 | a0001 | a0001c0001 | a0001c0001t0064 | a0001c0001t0064g0363 | 1 | 420 | 0.0024 | -18 | c.418 others(35): Show |
LDHAL6A | ENSG00000166800.11 | transcript | ENST00000280706.3 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDHAL6B_chr15_59201843_59213588 | 59213136 | TTTATTAT others(11): Show |
T | downstream_gene_variant | MODIFIER | NA19065.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0000 | 1 | 448 | 0.0022 | -18 | c.*50 others(29): Show |
LDHAL6B | ENSG00000171989.6 | transcript | ENST00000307144.6 | protein_coding | 4549 | chr15 | TogoVar | |||||||
LDHC_chr11_18407318_18457063 | 18444604 | GTATATAT others(11): Show |
G | intron_variant | MODIFIER | HG00323.hp2 HG00733.hp1 HG01884.hp1 others(6): Show |
a0001a0004a0005 | a0001c0001a0004c0005a0005c0004 | a0001c0001t0002a0001c0001t0003a0004c0005t0007others(1): Show | a0001c0001t0002g0006 a0001c0001t0002g0021 a0001c0001t0002g0033 others(5): Show |
9 | 348 | 0.0259 | -18 | c.711 others(35): Show |
LDHC | ENSG00000166796.12 | transcript | ENST00000541669.6 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDHC_chr11_18407318_18457063 | 18453598 | GTGTGTGT others(11): Show |
G | downstream_gene_variant | MODIFIER | HG00741.hp1 HG02135.hp1 HG02451.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0075 a0001c0001t0001g0118 a0001c0001t0001g0166 others(4): Show |
9 | 348 | 0.0259 | -18 | c.*24 others(29): Show |
LDHC | ENSG00000166796.12 | transcript | ENST00000541669.6 | protein_coding | 1536 | chr11 | TogoVar | |||||||
LDHC_chr11_18407318_18457063 | 18453600 | GTGTGTAT others(11): Show |
G | downstream_gene_variant | MODIFIER | HG03669.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0188 | 1 | 348 | 0.0029 | -18 | c.*24 others(29): Show |
LDHC | ENSG00000166796.12 | transcript | ENST00000541669.6 | protein_coding | 1538 | chr11 | TogoVar | |||||||
LDLRAD1_chr1_54002298_54023186 | 54011382 | CCTGGGAT others(11): Show |
C | intron_variant | MODIFIER | HG02698.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0047 | 1 | 400 | 0.0025 | -18 | c.340 others(33): Show |
LDLRAD1 | ENSG00000203985.11 | transcript | ENST00000371360.2 | protein_coding | 4/5 | chr1 | TogoVar | |||||||
LDLRAD3_chr11_35939062_36237136 | 36030435 | AGTGTGTG others(11): Show |
A | intron_variant | MODIFIER | HG02109.hp1 HG03130.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0008 | a0001c0001t0005g0200 a0001c0001t0008g0199 |
2 | 236 | 0.0085 | -18 | c.47- others(33): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDLRAD3_chr11_35939062_36237136 | 36140992 | TTCTCTCT others(11): Show |
T | intron_variant | MODIFIER | NA19066.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0121 | 1 | 236 | 0.0042 | -18 | c.454 others(37): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDLRAD3_chr11_35939062_36237136 | 36143907 | TCTCCCTC others(11): Show |
T | intron_variant | MODIFIER | HG02258.hp2 | a0002 | a0002c0004 | a0002c0004t0004 | a0002c0004t0004g0231 | 1 | 236 | 0.0042 | -18 | c.454 others(37): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDLRAD3_chr11_35939062_36237136 | 36147098 | CTTTTTTT others(11): Show |
C | intron_variant | MODIFIER | HG02818.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0095 | 1 | 236 | 0.0042 | -18 | c.454 others(37): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13321861 | CAAAAAAA others(11): Show |
C | intron_variant | MODIFIER | HG01891.hp2 HG02055.hp2 HG02257.hp2 |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0043a0001c0001t0054 | a0001c0001t0012g0028 a0001c0001t0043g0157 a0001c0001t0054g0076 |
3 | 178 | 0.0169 | -18 | c.-38 others(39): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13395447 | AGGTGGGG others(11): Show |
A | intron_variant | MODIFIER | HG02698.hp2 | a0001 | a0001c0001 | a0001c0001t0062 | a0001c0001t0062g0033 | 1 | 178 | 0.0056 | -18 | c.40+ others(33): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13395642 | GGGAGCTG others(11): Show |
G | intron_variant | MODIFIER | HG02258.hp2 HG02717.hp1 HG02886.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0001t0007a0001c0001t0015others(2): Show | a0001c0001t0006g0103 a0001c0001t0006g0176 a0001c0001t0007g0073 others(3): Show |
6 | 178 | 0.0337 | -18 | c.40+ others(33): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13473636 | CATATATA others(11): Show |
C | intron_variant | MODIFIER | HG02451.hp1 HG02486.hp2 HG02922.hp2 |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0020a0001c0001t0056 | a0001c0001t0007g0073 a0001c0001t0020g0178 a0001c0001t0056g0059 |
3 | 178 | 0.0169 | -18 | c.181 others(37): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13610288 | TTTTTTTT others(11): Show |
T | intron_variant | MODIFIER | HG03669.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0096 | 1 | 178 | 0.0056 | -18 | c.182 others(37): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 4/6 | chr18 | TogoVar | |||||||
LEF1_chr4_108042548_108173932 | 108099570 | GTATATAT others(11): Show |
G | intron_variant | MODIFIER | HG03017.hp2 HG03486.hp2 NA18991.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0013a0001c0001t0023 | a0001c0001t0003g0221 a0001c0001t0013g0107 a0001c0001t0023g0166 |
3 | 264 | 0.0114 | -18 | c.415 others(37): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 3/11 | chr4 | TogoVar | |||||||
LEMD2_chr6_33766213_33794130 | 33781758 | TCCCCTGG others(11): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG02129.hp1 NA18747.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0013 a0001c0001t0001g0037 a0001c0001t0001g0072 others(3): Show |
12 | 400 | 0.0300 | -18 | c.854 others(33): Show |
LEMD2 | ENSG00000161904.13 | transcript | ENST00000293760.10 | protein_coding | 3/8 | chr6 | TogoVar | |||||||
LENG8_chr19_54444199_54467016 | 54444671 | CAAAAAAA others(11): Show |
C | upstream_gene_variant | MODIFIER | HG01891.hp1 HG02451.hp2 HG02818.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0023 a0001c0001t0001g0091 |
4 | 431 | 0.0093 | -18 | c.-46 others(29): Show |
LENG8 | ENSG00000167615.18 | transcript | ENST00000326764.10 | protein_coding | 4527 | chr19 | TogoVar | |||||||
LEO1_chr15_51933025_51976778 | 51961352 | AGGTGGTG others(11): Show |
A | intron_variant | MODIFIER | HG02280.hp1 HG02970.hp2 HG03041.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 others(1): Show |
4 | 388 | 0.0103 | -18 | c.920 others(33): Show |
LEO1 | ENSG00000166477.13 | transcript | ENST00000299601.10 | protein_coding | 3/11 | chr15 | TogoVar | |||||||
LEPR_chr1_65415668_65646559 | 65487877 | CTTTCTTT others(11): Show |
C | intron_variant | MODIFIER | HG02976.hp2 | a0006 | a0006c0013 | a0006c0013t0022 | a0006c0013t0022g0096 | 1 | 216 | 0.0046 | -18 | c.-21 others(37): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65518899 | TTCTTTCT others(11): Show |
T | intron_variant | MODIFIER | HG00323.hp1 | a0003 | a0003c0005 | a0003c0005t0007 | a0003c0005t0007g0198 | 1 | 216 | 0.0046 | -18 | c.-20 others(37): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LEP_chr7_128236278_128262629 | 128244246 | GACACACA others(11): Show |
G | intron_variant | MODIFIER | HG00642.hp2 HG01433.hp1 HG01884.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0026 | a0001c0001t0003g0010 a0001c0001t0003g0096 a0001c0001t0026g0121 others(1): Show |
10 | 395 | 0.0253 | -18 | c.-29 others(35): Show |
LEP | ENSG00000174697.5 | transcript | ENST00000308868.5 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LETM1_chr4_1806479_1861156 | 1826967 | TGTCGCCT others(11): Show |
T | intron_variant | MODIFIER | HG02258.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0160 | 1 | 200 | 0.0050 | -18 | c.108 others(37): Show |
LETM1 | ENSG00000168924.15 | transcript | ENST00000302787.3 | protein_coding | 6/13 | chr4 | TogoVar | |||||||
LEXM_chr1_54801063_54847252 | 54819835 | TTTCTCTT others(11): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00639.hp2 HG00741.hp1 others(22): Show |
a0001a0002a0012 | a0001c0002a0002c0001a0012c0021 | a0001c0002t0002a0002c0001t0001a0012c0021t0004 | a0001c0002t0002g0010 a0001c0002t0002g0023 a0001c0002t0002g0046 others(15): Show |
25 | 382 | 0.0655 | -18 | c.118 others(37): Show |
LEXM | ENSG00000162398.12 | transcript | ENST00000371273.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LGALS16_chr19_39650913_39665647 | 39663776 | CTCTCTCT others(11): Show |
C | downstream_gene_variant | MODIFIER | HG00423.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 442 | 0.0023 | -18 | c.*32 others(29): Show |
LGALS16 | ENSG00000249861.4 | transcript | ENST00000392051.4 | protein_coding | 3130 | chr19 | TogoVar | |||||||
LGALS16_chr19_39650913_39665647 | 39663780 | CTCTCTCT others(11): Show |
C | downstream_gene_variant | MODIFIER | HG03490.hp2 HG03492.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 2 | 442 | 0.0045 | -18 | c.*32 others(29): Show |
LGALS16 | ENSG00000249861.4 | transcript | ENST00000392051.4 | protein_coding | 3134 | chr19 | TogoVar | |||||||
LGALS16_chr19_39650913_39665647 | 39663782 | CTCTCTCT others(11): Show |
C | downstream_gene_variant | MODIFIER | NA18947.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 442 | 0.0023 | -18 | c.*32 others(29): Show |
LGALS16 | ENSG00000249861.4 | transcript | ENST00000392051.4 | protein_coding | 3136 | chr19 | TogoVar | |||||||
LGALS16_chr19_39650913_39665647 | 39663807 | TATATATA others(11): Show |
T | downstream_gene_variant | MODIFIER | HG00733.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 442 | 0.0023 | -18 | c.*32 others(29): Show |
LGALS16 | ENSG00000249861.4 | transcript | ENST00000392051.4 | protein_coding | 3161 | chr19 | TogoVar | |||||||
LGALS4_chr19_38796674_38817945 | 38802997 | CTTTTCTT others(11): Show |
C | intron_variant | MODIFIER | HG01515.hp2 HG01517.hp2 HG03927.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0110 a0001c0001t0001g0120 a0001c0001t0001g0139 |
3 | 426 | 0.0070 | -18 | c.570 others(33): Show |
LGALS4 | ENSG00000171747.9 | transcript | ENST00000307751.9 | protein_coding | 7/9 | chr19 | TogoVar | |||||||
LGI1_chr10_93752936_93803159 | 93778345 | TCACACAC others(11): Show |
T | intron_variant | MODIFIER | HG01175.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0158 | 1 | 376 | 0.0027 | -18 | c.431 others(33): Show |
LGI1 | ENSG00000108231.14 | transcript | ENST00000371418.9 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LGI3_chr8_22141830_22161806 | 22157791 | TATTTTGC others(11): Show |
T | upstream_gene_variant | MODIFIER | HG02258.hp2 HG02486.hp2 HG02886.hp1 others(6): Show |
a0001a0002a0008 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0002a0001c0004t0011a0002c0002t0007others(1): Show | a0001c0001t0002g0010 a0001c0001t0002g0129 a0001c0001t0002g0130 others(5): Show |
9 | 408 | 0.0221 | -18 | c.-12 others(29): Show |
LGI3 | ENSG00000168481.9 | transcript | ENST00000306317.7 | protein_coding | 986 | chr8 | TogoVar | |||||||
LGI4_chr19_35119513_35140059 | 35137203 | TTCACACA others(11): Show |
T | upstream_gene_variant | MODIFIER | NA19078.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0040 | 1 | 398 | 0.0025 | -18 | c.-25 others(29): Show |
LGI4 | ENSG00000153902.14 | transcript | ENST00000310123.8 | protein_coding | 2145 | chr19 | TogoVar | |||||||
LGMN_chr14_92698809_92753627 | 92703056 | CTGTGTGT others(11): Show |
C | downstream_gene_variant | MODIFIER | HG00597.hp2 HG01256.hp1 HG02027.hp1 others(32): Show |
a0001a0006 | a0001c0001a0001c0002a0006c0011 | a0001c0001t0001a0001c0001t0007a0001c0002t0001others(1): Show | a0001c0001t0001g0047 a0001c0001t0001g0058 a0001c0001t0001g0073 others(32): Show |
35 | 420 | 0.0833 | -18 | c.*12 others(29): Show |
LGMN | ENSG00000100600.15 | transcript | ENST00000334869.9 | protein_coding | 752 | chr14 | TogoVar | |||||||
LGMN_chr14_92698809_92753627 | 92719236 | GCCACCAC others(11): Show |
G | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp2 HG00639.hp2 others(68): Show |
a0001a0002a0007 | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0004t0001others(5): Show | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(65): Show |
71 | 420 | 0.1691 | -18 | c.139 others(33): Show |
LGMN | ENSG00000100600.15 | transcript | ENST00000334869.9 | protein_coding | 2/13 | chr14 | TogoVar | |||||||
LGMN_chr14_92698809_92753627 | 92719248 | ACCACCAC others(11): Show |
A | intron_variant | MODIFIER | NA18960.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0335 | 1 | 420 | 0.0024 | -18 | c.139 others(33): Show |
LGMN | ENSG00000100600.15 | transcript | ENST00000334869.9 | protein_coding | 2/13 | chr14 | TogoVar | |||||||
LGMN_chr14_92698809_92753627 | 92719263 | ACCGCCGC others(11): Show |
A | intron_variant | MODIFIER | HG01891.hp1 HG02145.hp2 HG02976.hp1 others(2): Show |
a0001a0002 | a0001c0002a0002c0005 | a0001c0002t0001a0002c0005t0001 | a0001c0002t0001g0089 a0001c0002t0001g0204 a0002c0005t0001g0097 others(2): Show |
5 | 420 | 0.0119 | -18 | c.139 others(33): Show |
LGMN | ENSG00000100600.15 | transcript | ENST00000334869.9 | protein_coding | 2/13 | chr14 | TogoVar | |||||||
LGMN_chr14_92698809_92753627 | 92722531 | CCGAGATT others(11): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00621.hp1 others(49): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0014others(4): Show | a0001c0001t0001a0001c0002t0001a0001c0014t0001others(4): Show | a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0088 others(48): Show |
52 | 420 | 0.1238 | -18 | c.139 others(35): Show |
LGMN | ENSG00000100600.15 | transcript | ENST00000334869.9 | protein_coding | 2/13 | chr14 | TogoVar |