Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LINGO2_chr9_27932617_29218601	28322438	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG02895.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0003 a0001c0001t0006g0004 a0001c0001t0006g0003 a0001c0001t0006g0004	2	62	0.0323	-18	c.-19 others(39): Show c.-194-27090_-194-27073delGTGTGTGTGTGTGTGTGT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	5/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28355363	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00741.hp1 HG01261.hp1 others(2): Show HG00642.hp1 HG00741.hp1 HG01261.hp1 HG03209.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0001t0016	a0001c0001t0001g0047 a0001c0001t0005g0057 a0001c0001t0007g0009 others(2): Show a0001c0001t0001g0047 a0001c0001t0005g0057 a0001c0001t0007g0009 a0001c0001t0012g0005 a0001c0001t0016g0011	5	62	0.0807	-18	c.-19 others(39): Show c.-195+17455_-195+17472delCACACACACACACACACA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	5/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28375117	CACACACA others(11): Show CACACACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02895.hp1 HG02451.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0027 a0001c0001t0019 a0001c0001t0027	a0001c0001t0019g0053 a0001c0001t0027g0030 a0001c0001t0019g0053 a0001c0001t0027g0030	2	62	0.0323	-18	c.-22 others(37): Show c.-227-2267_-227-2250delATGTGTGTGTGTGTGTGT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	4/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28479911	GTATATAT others(11): Show GTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03486.hp2 HG02922.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0028 a0001c0004t0005 a0001c0001t0028 a0001c0004t0005	a0001c0001t0028g0038 a0001c0004t0005g0054 a0001c0001t0028g0038 a0001c0004t0005g0054	2	62	0.0323	-18	c.-31 others(37): Show c.-313-3904_-313-3887delTATATATATATATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	3/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28506469	CACACACA others(11): Show CACACACACACATACACAT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02027.hp2 HG02976.hp1 others(1): Show HG00438.hp2 HG02027.hp2 HG02976.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0035 a0001c0001t0001 a0001c0001t0003 a0001c0001t0035	a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0003g0034 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0003g0034 a0001c0001t0035g0060	4	62	0.0645	-18	c.-31 others(39): Show c.-313-30462_-313-30445delATGTGTATGTGTGTGTGT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	3/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28664996	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02922.hp1 HG03139.hp2 others(1): Show HG00597.hp1 HG02922.hp1 HG03139.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0001t0017	a0001c0001t0001g0035 a0001c0001t0008g0020 a0001c0001t0009g0056 others(1): Show a0001c0001t0001g0035 a0001c0001t0008g0020 a0001c0001t0009g0056 a0001c0001t0017g0007	4	62	0.0645	-18	c.-31 others(37): Show c.-314+5186_-314+5203delATATATATATATATATAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	3/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28771452	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02109.hp1 HG02109.hp2 others(5): Show HG01074.hp2 HG02109.hp1 HG02109.hp2 HG02809.hp2 HG02895.hp1 HG02976.hp1 HG03209.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 others(5): Show a0001c0001t0004 a0001c0001t0010 a0001c0001t0012 a0001c0001t0018 a0001c0001t0022 a0001c0001t0026 a0001c0001t0027 a0001c0001t0035	a0001c0001t0004g0039 a0001c0001t0010g0001 a0001c0001t0012g0005 others(5): Show a0001c0001t0004g0039 a0001c0001t0010g0001 a0001c0001t0012g0005 a0001c0001t0018g0015 a0001c0001t0022g0031 a0001c0001t0026g0013 a0001c0001t0027g0030 a0001c0001t0035g0060	8	62	0.1290	-18	c.-39 others(41): Show c.-394-101190_-394-101173delACACACACACACACACAC	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28848391	GTGTGTGT others(11): Show GTGTGTGTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG06807.hp1 HG03209.hp1 HG06807.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0001 a0001c0001t0004 a0002c0002t0001	a0001c0001t0004g0039 a0002c0002t0001g0050 a0001c0001t0004g0039 a0002c0002t0001g0050	2	62	0.0323	-18	c.-39 others(39): Show c.-395+99409_-395+99426delTATATATATATACACACA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	29085281	TAAAAAAA others(11): Show TAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0051 a0001c0001t0021g0051	1	62	0.0161	-18	c.-49 others(41): Show c.-492+127623_-492+127640delTTTTTTTTTTTTTTTTTT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	29114380	TTTATTAT others(11): Show TTTATTATTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp2 HG00597.hp1 others(18): Show HG00408.hp1 HG00408.hp2 HG00597.hp1 HG00642.hp2 HG00741.hp2 HG01071.hp2 HG01074.hp2 HG01261.hp1 HG02451.hp2 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03139.hp1 HG03486.hp2 NA18990.hp2 NA19043.hp1 NA19043.hp2 NA19060.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0022 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0031 a0001c0001t0036 a0001c0004t0005	a0001c0001t0001g0029 a0001c0001t0001g0035 a0001c0001t0001g0047 others(18): Show a0001c0001t0001g0029 a0001c0001t0001g0035 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0002g0052 a0001c0001t0003g0032 a0001c0001t0003g0034 a0001c0001t0003g0049 a0001c0001t0004g0033 a0001c0001t0006g0003 a0001c0001t0006g0004 a0001c0001t0011g0002 a0001c0001t0012g0005 a0001c0001t0015g0012 a0001c0001t0022g0031 a0001c0001t0024g0027 a0001c0001t0026g0013 a0001c0001t0027g0030 a0001c0001t0031g0021 a0001c0001t0036g0062 a0001c0004t0005g0054	21	62	0.3387	-18	c.-49 others(39): Show c.-492+98524_-492+98541delTAATAATAATAATAATAA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	29179158	AATATATA others(11): Show AATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00597.hp2 HG00741.hp1 others(13): Show HG00438.hp1 HG00597.hp2 HG00741.hp1 HG01074.hp2 HG02027.hp1 HG02056.hp2 HG02602.hp1 HG02602.hp2 HG02895.hp2 HG02897.hp1 HG03130.hp2 NA18990.hp1 NA18995.hp1 NA19043.hp1 NA19060.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0013 a0001c0001t0020 a0001c0001t0023 a0001c0001t0026 a0001c0001t0030	a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0002g0044 others(13): Show a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0003g0025 a0001c0001t0003g0049 a0001c0001t0006g0003 a0001c0001t0006g0004 a0001c0001t0007g0006 a0001c0001t0007g0009 a0001c0001t0012g0005 a0001c0001t0013g0010 a0001c0001t0020g0042 a0001c0001t0023g0037 a0001c0001t0026g0013 a0001c0001t0030g0026	16	62	0.2581	-18	c.-49 others(39): Show c.-492+33746_-492+33763delATATATATATATATATAT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/6			chr9	TogoVar
LIPG_chr18_49557057_49604185	49571873	GAGAGAAG others(11): Show GAGAGAAGCCTGTGATACT	G G	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0057 a0002c0012t0057	a0002c0012t0057g0368 a0002c0012t0057g0368	1	384	0.0026	-18	c.571 others(35): Show c.571+2328_571+2345delAGAAGCCTGTGATACTAG	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579001	GGGGAGAG others(11): Show GGGGAGAGGGAGAGGGAGA	G G	intron_variant intron_variant	MODIFIER	HG01070.hp2 NA19043.hp1 HG01070.hp2 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0061 a0002c0002t0005 a0001c0001t0061 a0002c0002t0005	a0001c0001t0061g0036 a0002c0002t0005g0365 a0001c0001t0061g0036 a0002c0002t0005g0365	2	384	0.0052	-18	c.794 others(35): Show c.794-2194_794-2177delAGAGGGAGAGGGAGAGGG	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPH_chr3_185501262_185557588	185529954	GAAAGAAA others(11): Show GAAAGAAAGAAGGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0193 a0001c0001t0002g0193	1	358	0.0028	-18	c.527 others(35): Show c.527-2387_527-2370delTTCTTTCCTTCTTTCTTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	3/9			chr3	TogoVar
LIPH_chr3_185501262_185557588	185529958	GAAAGAAG others(11): Show GAAAGAAGGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0060 a0001c0001t0010g0060	1	358	0.0028	-18	c.527 others(35): Show c.527-2391_527-2374delTTCTTTCTTTCCTTCTTT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	3/9			chr3	TogoVar
LIPH_chr3_185501262_185557588	185529960	AAGAAGGA others(11): Show AAGAAGGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG03209.hp1 HG03486.hp1 HG02738.hp2 HG03209.hp1 HG03486.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0136 a0001c0002t0001g0235 a0001c0002t0001g0330 a0001c0002t0001g0136 a0001c0002t0001g0235 a0001c0002t0001g0330	3	358	0.0084	-18	c.527 others(35): Show c.527-2393_527-2376delCTTTCTTTCTTTCCTTCT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	3/9			chr3	TogoVar
LIPH_chr3_185501262_185557588	185538890	TACGTATA others(11): Show TACGTATATACACATATAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(106): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp2 HG01168.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01433.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp2 HG02257.hp2 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02735.hp1 HG02738.hp2 HG02818.hp1 HG02886.hp2 HG02970.hp1 HG02976.hp2 HG03209.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03710.hp1 HG03710.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18906.hp2 NA18939.hp1 NA18947.hp2 NA18949.hp2 NA18950.hp1 NA18959.hp2 NA18962.hp2 NA18963.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18972.hp1 NA18978.hp1 NA18979.hp1 NA18980.hp1 NA18982.hp1 NA18989.hp2 NA18991.hp1 NA18993.hp1 NA18995.hp1 NA18995.hp2 NA19001.hp2 NA19002.hp1 NA19005.hp1 NA19012.hp1 NA19030.hp1 NA19063.hp2 NA19064.hp1 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19077.hp1 NA19081.hp2 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp2 NA19240.hp1 NA20129.hp1 NA20752.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0008	a0001c0001 a0001c0002 a0003c0010 others(2): Show a0001c0001 a0001c0002 a0003c0010 a0004c0008 a0008c0006	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(17): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0013 a0001c0001t0017 a0001c0001t0020 a0001c0001t0033 a0001c0002t0001 a0001c0002t0004 a0001c0002t0013 a0001c0002t0016 a0001c0002t0018 a0001c0002t0024 a0001c0002t0025 a0001c0002t0026 a0001c0002t0027 a0001c0002t0028 a0003c0010t0001 a0004c0008t0002 a0008c0006t0001	a0001c0001t0002g0070 a0001c0001t0002g0131 a0001c0001t0002g0132 others(104): Show a0001c0001t0002g0070 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0003g0004 a0001c0001t0005g0325 a0001c0001t0013g0198 a0001c0001t0017g0353 a0001c0001t0020g0122 a0001c0001t0020g0351 a0001c0001t0033g0352 a0001c0002t0001g0009 a0001c0002t0001g0010 a0001c0002t0001g0059 a0001c0002t0001g0067 a0001c0002t0001g0068 a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0001g0087 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0092 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0136 a0001c0002t0001g0215 a0001c0002t0001g0218 a0001c0002t0001g0221 a0001c0002t0001g0222 a0001c0002t0001g0223 a0001c0002t0001g0227 a0001c0002t0001g0228 a0001c0002t0001g0229 a0001c0002t0001g0231 a0001c0002t0001g0233 a0001c0002t0001g0234 a0001c0002t0001g0235 a0001c0002t0001g0236 a0001c0002t0001g0237 a0001c0002t0001g0239 a0001c0002t0001g0240 a0001c0002t0001g0241 a0001c0002t0001g0242 a0001c0002t0001g0243 a0001c0002t0001g0244 a0001c0002t0001g0245 a0001c0002t0001g0246 a0001c0002t0001g0247 a0001c0002t0001g0254 a0001c0002t0001g0257 a0001c0002t0001g0260 a0001c0002t0001g0261 a0001c0002t0001g0262 a0001c0002t0001g0264 a0001c0002t0001g0274 a0001c0002t0001g0275 a0001c0002t0001g0278 a0001c0002t0001g0279 a0001c0002t0001g0292 a0001c0002t0001g0293 a0001c0002t0001g0294 a0001c0002t0001g0295 a0001c0002t0001g0304 a0001c0002t0001g0318 a0001c0002t0001g0320 a0001c0002t0001g0322 a0001c0002t0001g0326 a0001c0002t0001g0327 a0001c0002t0001g0328 a0001c0002t0001g0329 a0001c0002t0001g0330 a0001c0002t0001g0332 a0001c0002t0001g0343 a0001c0002t0001g0344 a0001c0002t0001g0346 a0001c0002t0001g0347 a0001c0002t0004g0003 a0001c0002t0004g0066 a0001c0002t0004g0077 a0001c0002t0004g0124 a0001c0002t0004g0133 a0001c0002t0004g0220 a0001c0002t0004g0226 a0001c0002t0004g0232 a0001c0002t0004g0258 a0001c0002t0004g0259 a0001c0002t0004g0323 a0001c0002t0004g0324 a0001c0002t0004g0331 a0001c0002t0013g0210 a0001c0002t0013g0219 a0001c0002t0013g0303 a0001c0002t0016g0002 a0001c0002t0018g0321 a0001c0002t0024g0248 a0001c0002t0025g0345 a0001c0002t0026g0093 a0001c0002t0027g0224 a0001c0002t0028g0230 a0003c0010t0001g0253 a0004c0008t0002g0265 a0008c0006t0001g0263	109	358	0.3045	-18	c.50- others(33): Show c.50-3776_50-3759delGTATATGTGTATATACGT	LIPH	ENSG00000163898.10	transcript	ENST00000296252.9	protein_coding	1/9			chr3	TogoVar
LIPI_chr21_14103813_14215955	14106196	AAAAAAAA others(11): Show AAAAAAAAAATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0011 a0002c0002t0002g0011	1	362	0.0028	-18	c.27 others(29): Show c.2779_*2796delATATATATATTTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2616		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106200	AAAAAATA others(11): Show AAAAAATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0005 a0005	a0005c0004 a0005c0004	a0005c0004t0002 a0005c0004t0002	a0005c0004t0002g0039 a0005c0004t0002g0039	1	362	0.0028	-18	c.27 others(29): Show c.2775_*2792delATATATATATATATTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2612		chr21	TogoVar
LIPN_chr10_88755020_88784626	88767644	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01169.hp2 HG01891.hp1 others(9): Show HG01168.hp2 HG01169.hp2 HG01891.hp1 HG02027.hp1 HG02080.hp1 HG02258.hp2 HG02965.hp1 HG02965.hp2 HG06807.hp1 NA18906.hp1 NA18972.hp1 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0001 a0001c0004t0001 a0001c0002t0001 a0001c0004t0001	a0001c0002t0001g0029 a0001c0002t0001g0050 a0001c0002t0001g0053 others(5): Show a0001c0002t0001g0029 a0001c0002t0001g0050 a0001c0002t0001g0053 a0001c0002t0001g0076 a0001c0002t0001g0157 a0001c0004t0001g0048 a0001c0004t0001g0239 a0001c0004t0001g0264	12	394	0.0305	-18	c.536 others(35): Show c.536-1117_536-1100delAAAAAAAAAAAAAAAAAA	LIPN	ENSG00000204020.6	transcript	ENST00000404459.2	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
LIPT1_chr2_99149967_99168137	99161251	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02258.hp2 HG02486.hp1 others(1): Show HG02074.hp2 HG02258.hp2 HG02486.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0147 a0001c0001t0001g0164 a0001c0001t0001g0191 others(1): Show a0001c0001t0001g0147 a0001c0001t0001g0164 a0001c0001t0001g0191 a0001c0002t0001g0132	4	406	0.0099	-18	c.-1- others(31): Show c.-1-682_-1-665delAAAAAAAAAAAAAAAAAA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161275	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0131 a0001c0002t0001g0131	1	406	0.0025	-18	c.-1- others(31): Show c.-1-680_-1-663delAAAAAAAAAAAAAAAATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161277	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0202 a0001c0001t0001g0202	1	406	0.0025	-18	c.-1- others(31): Show c.-1-678_-1-661delAAAAAAAAAAAAAATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161279	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0224 a0001c0003t0001g0224	1	406	0.0025	-18	c.-1- others(31): Show c.-1-676_-1-659delAAAAAAAAAAAATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161285	AAAAAAAA others(11): Show AAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0208 a0001c0003t0001g0208	1	406	0.0025	-18	c.-1- others(31): Show c.-1-670_-1-653delAAAAAATATATATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161287	AAAAAATA others(11): Show AAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0138 a0001c0002t0001g0138	1	406	0.0025	-18	c.-1- others(31): Show c.-1-668_-1-651delAAAATATATATATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LMAN1_chr18_59322823_59364265	59347320	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01123.hp2 HG01192.hp2 others(19): Show HG01106.hp2 HG01123.hp2 HG01192.hp2 HG01261.hp1 HG01361.hp1 HG01993.hp1 HG02015.hp2 HG02055.hp1 HG02083.hp1 HG02523.hp1 NA18946.hp2 NA18979.hp2 NA18980.hp2 NA18998.hp1 NA19012.hp2 NA19057.hp2 NA19058.hp1 NA19063.hp1 NA19074.hp1 NA19078.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0003t0001 a0002c0002t0001	a0001c0001t0001g0186 a0001c0001t0003g0020 a0001c0001t0003g0045 others(11): Show a0001c0001t0001g0186 a0001c0001t0003g0020 a0001c0001t0003g0045 a0001c0001t0003g0136 a0001c0001t0003g0207 a0001c0001t0003g0208 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0214 a0001c0003t0001g0008 a0001c0003t0001g0077 a0001c0003t0001g0083 a0001c0003t0001g0093 a0002c0002t0001g0143	22	386	0.0570	-18	c.822 others(33): Show c.822+175_822+192delTTTTTTTTTTTTTTTTTT	LMAN1	ENSG00000074695.6	transcript	ENST00000251047.6	protein_coding	7/12			chr18	TogoVar
LMAN2_chr5_177326567_177356668	177326768	AGAAAGGA others(11): Show AGAAAGGAAAGAAAGAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 HG02896.hp2 HG02897.hp1 others(1): Show HG02895.hp1 HG02896.hp2 HG02897.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0056 a0001c0001t0001g0057 others(1): Show a0001c0001t0001g0049 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0213	4	376	0.0106	-18	c.53 others(29): Show c.5300_*5317delCTTTCTTTCTTTCCTTTC	LMAN2	ENSG00000169223.16	transcript	ENST00000303127.12	protein_coding		4798		chr5	TogoVar
LMAN2_chr5_177326567_177356668	177352813	TCACACAC others(11): Show TCACACACACACACACACA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0213	1	376	0.0027	-18	c.-11 others(29): Show c.-1184_-1167delTGTGTGTGTGTGTGTGTG	LMAN2	ENSG00000169223.16	transcript	ENST00000303127.12	protein_coding		1146		chr5	TogoVar
LMBR1L_chr12_49092139_49115847	49111931	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0017	1	380	0.0026	-18	c.-13 others(29): Show c.-1394_-1377delCACACACACACACACACA	LMBR1L	ENSG00000139636.16	transcript	ENST00000267102.13	protein_coding		1085		chr12	TogoVar
LMBR1_chr7_156672791_156898183	156729936	ACAATGAA others(11): Show ACAATGAAAATTGAGGGGC	A A	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0241 a0001c0001t0046g0241	1	314	0.0032	-18	c.839 others(35): Show c.839-1234_839-1217delGCCCCTCAATTTTCATTG	LMBR1	ENSG00000105983.23	transcript	ENST00000353442.10	protein_coding	10/16			chr7	TogoVar
LMBRD2_chr5_36093407_36156887	36146923	TGTGTGTG others(11): Show TGTGTGTGTGTGTGTGTGA	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0247 a0001c0001t0001g0247	1	362	0.0028	-18	c.-57 others(35): Show c.-57-3535_-57-3518delTCACACACACACACACAC	LMBRD2	ENSG00000164187.7	transcript	ENST00000296603.5	protein_coding	1/17			chr5	TogoVar
LMCD1_chr3_8496823_8579668	8502296	TTATATAT others(11): Show TTATATATAATATATAAAA	T T	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03453.hp1 HG03486.hp1 others(1): Show HG02976.hp1 HG03453.hp1 HG03486.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0001 a0001c0001t0005 a0001c0001t0007	a0001c0001t0001g0015 a0001c0001t0001g0228 a0001c0001t0005g0229 others(1): Show a0001c0001t0001g0015 a0001c0001t0001g0228 a0001c0001t0005g0229 a0001c0001t0007g0230	4	314	0.0127	-18	c.42+ others(31): Show c.42+324_42+341delAATATATAAAATATATAT	LMCD1	ENSG00000071282.12	transcript	ENST00000157600.8	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
LMCD1_chr3_8496823_8579668	8502569	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0244 a0001c0001t0005g0244	1	314	0.0032	-18	c.42+ others(31): Show c.42+610_42+627delACACACACACACACACAC	LMCD1	ENSG00000071282.12	transcript	ENST00000157600.8	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
LMF1_chr16_848634_975984	948927	CGACAGAG others(11): Show CGACAGAGTCAGAGCCAAG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00323.hp2 others(26): Show HG00140.hp1 HG00140.hp2 HG00323.hp2 HG00423.hp1 HG01081.hp1 HG01361.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp2 HG01952.hp2 HG01993.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02109.hp1 HG02258.hp1 HG02258.hp2 HG02572.hp1 HG02818.hp1 HG02886.hp2 HG02976.hp1 HG03130.hp2 HG03516.hp1 HG03831.hp1 NA18612.hp2 NA18951.hp1 NA19003.hp2 NA19011.hp1 NA19066.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0009 a0015	a0001c0004 a0001c0005 a0001c0006 others(9): Show a0001c0004 a0001c0005 a0001c0006 a0001c0022 a0002c0007 a0002c0016 a0002c0054 a0003c0014 a0003c0015 a0004c0019 a0009c0024 a0015c0031	a0001c0004t0001 a0001c0004t0004 a0001c0005t0001 others(11): Show a0001c0004t0001 a0001c0004t0004 a0001c0005t0001 a0001c0005t0012 a0001c0006t0001 a0001c0022t0001 a0002c0007t0001 a0002c0016t0001 a0002c0054t0001 a0003c0014t0001 a0003c0015t0001 a0004c0019t0001 a0009c0024t0001 a0015c0031t0001	a0001c0004t0001g0061 a0001c0004t0004g0030 a0001c0005t0001g0109 others(26): Show a0001c0004t0001g0061 a0001c0004t0004g0030 a0001c0005t0001g0109 a0001c0005t0001g0111 a0001c0005t0001g0112 a0001c0005t0001g0113 a0001c0005t0001g0116 a0001c0005t0001g0129 a0001c0005t0001g0130 a0001c0005t0012g0110 a0001c0006t0001g0082 a0001c0006t0001g0092 a0001c0022t0001g0241 a0001c0022t0001g0268 a0002c0007t0001g0120 a0002c0016t0001g0076 a0002c0054t0001g0114 a0003c0014t0001g0009 a0003c0014t0001g0010 a0003c0014t0001g0015 a0003c0014t0001g0016 a0003c0015t0001g0011 a0003c0015t0001g0013 a0003c0015t0001g0014 a0004c0019t0001g0060 a0004c0019t0001g0083 a0009c0024t0001g0117 a0009c0024t0001g0118 a0015c0031t0001g0012	29	294	0.0986	-18	c.503 others(35): Show c.503+5412_503+5429delCTTGGCTCTGACTCTGTC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	2/10			chr16	TogoVar
LMF1_chr16_848634_975984	949680	TGACAGAG others(11): Show TGACAGAGTCAGAGACAAC	T T	intron_variant intron_variant	MODIFIER	HG00609.hp2 NA19010.hp1 HG00609.hp2 NA19010.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0002c0007t0001 a0001c0001t0001 a0002c0007t0001	a0001c0001t0001g0178 a0002c0007t0001g0148 a0001c0001t0001g0178 a0002c0007t0001g0148	2	294	0.0068	-18	c.503 others(35): Show c.503+4659_503+4676delGTTGTCTCTGACTCTGTC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	2/10			chr16	TogoVar
LMLN_chr3_197955217_198048720	197985390	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18951.hp1 NA18951.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0245 a0001c0001t0004g0245	1	258	0.0039	-18	c.811 others(33): Show c.811-386_811-369delCACACACACACACACACA	LMLN	ENSG00000185621.11	transcript	ENST00000420910.7	protein_coding	7/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
LMNB1_chr5_126772136_126842020	126785721	CCCAACCC others(11): Show CCCAACCCTTAGGTTGGGA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00558.hp2 others(75): Show HG00280.hp1 HG00280.hp2 HG00558.hp2 HG00597.hp1 HG00673.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01123.hp1 HG01169.hp2 HG01256.hp1 HG01361.hp1 HG01433.hp1 HG01517.hp2 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG02004.hp1 HG02027.hp1 HG02148.hp1 HG02257.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02647.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02970.hp1 HG02976.hp1 HG03139.hp1 HG03239.hp1 HG03453.hp1 HG03579.hp1 HG03710.hp1 HG03710.hp2 HG03927.hp1 HG04199.hp1 NA18747.hp1 NA18944.hp2 NA18948.hp1 NA18951.hp1 NA18953.hp2 NA18964.hp1 NA18966.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18983.hp2 NA18995.hp1 NA18997.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp2 NA19065.hp1 NA19068.hp1 NA19070.hp2 NA19075.hp2 NA19079.hp2 NA19082.hp2 NA19091.hp2 NA20300.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0007t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(67): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0057 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0359 a0001c0001t0002g0010 a0001c0001t0002g0193 a0001c0001t0002g0221 a0001c0001t0003g0178 a0001c0001t0003g0183 a0001c0001t0003g0210 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0216 a0001c0001t0003g0217 a0001c0001t0003g0228 a0001c0001t0003g0230 a0001c0001t0003g0231 a0001c0007t0001g0056	78	374	0.2086	-18	c.359 others(35): Show c.359+7858_359+7875delACCCTTAGGTTGGGACCA	LMNB1	ENSG00000113368.12	transcript	ENST00000261366.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
LMNB1_chr5_126772136_126842020	126800254	GATGTATA others(11): Show GATGTATATACCATGCACC	G G	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03209.hp2 HG03471.hp1 HG03041.hp2 HG03209.hp2 HG03471.hp1	a0001 a0001	a0001c0006 a0001c0008 a0001c0006 a0001c0008	a0001c0006t0007 a0001c0008t0003 a0001c0006t0007 a0001c0008t0003	a0001c0006t0007g0044 a0001c0006t0007g0046 a0001c0008t0003g0045 a0001c0006t0007g0044 a0001c0006t0007g0046 a0001c0008t0003g0045	3	374	0.0080	-18	c.360 others(35): Show c.360-4519_360-4502delGTATATACCATGCACCAT	LMNB1	ENSG00000113368.12	transcript	ENST00000261366.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
LMNTD1_chr12_25471082_25558283	25481865	TCACACAC others(11): Show TCACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	388	0.0026	-18	c.23 others(35): Show c.23-5423_*23-5406delTGTGTGTGTGTGTGTGTG	LMNTD1	ENSG00000152936.11	transcript	ENST00000458174.7	protein_coding	9/9			chr12	TogoVar
LMNTD1_chr12_25471082_25558283	25520139	GATATACA others(11): Show GATATACATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0133 a0001c0001t0002g0133	1	388	0.0026	-18	c.799 others(31): Show c.799-82_799-65delATATATATATATGTATAT	LMNTD1	ENSG00000152936.11	transcript	ENST00000458174.7	protein_coding	6/9			chr12	TogoVar
LMNTD1_chr12_25471082_25558283	25527669	TATATATA others(11): Show TATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18969.hp1 NA19006.hp1 NA19084.hp2 others(1): Show NA18969.hp1 NA19006.hp1 NA19084.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0146 a0001c0001t0001g0187 a0001c0001t0001g0205 others(1): Show a0001c0001t0001g0146 a0001c0001t0001g0187 a0001c0001t0001g0205 a0001c0001t0001g0230	4	388	0.0103	-18	c.492 others(33): Show c.492-732_492-715delGTGTGTATATATATATAT	LMNTD1	ENSG00000152936.11	transcript	ENST00000458174.7	protein_coding	4/9			chr12	TogoVar
LMNTD1_chr12_25471082_25558283	25527673	TATATATA others(11): Show TATATATATACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03195.hp1 HG03453.hp2 HG03139.hp1 HG03195.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178	3	388	0.0077	-18	c.492 others(33): Show c.492-736_492-719delGTGTGTGTGTATATATAT	LMNTD1	ENSG00000152936.11	transcript	ENST00000458174.7	protein_coding	4/9			chr12	TogoVar
LMO2_chr11_33853576_33897076	33891372	CACACACA others(11): Show CACACACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0399 a0001c0001t0001g0399	1	442	0.0023	-18	c.-33 others(35): Show c.-336+405_-336+422delATGTGTGTGTGTGTGTGT	LMO2	ENSG00000135363.12	transcript	ENST00000257818.3	protein_coding	1/5			chr11	TogoVar
LMO3_chr12_16543372_16611162	16565983	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01975.hp2 HG02630.hp1 HG02895.hp2 others(7): Show HG01975.hp2 HG02630.hp1 HG02895.hp2 HG02897.hp1 HG03704.hp1 NA18612.hp1 NA18968.hp1 NA19058.hp1 NA19063.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0042 others(5): Show a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0042 a0001c0001t0001g0096 a0001c0001t0001g0163 a0001c0001t0001g0203 a0001c0001t0001g0224 a0001c0001t0001g0245	10	354	0.0283	-18	c.207 others(35): Show c.207-5463_207-5446delATATATATATATATATAT	LMO3	ENSG00000048540.16	transcript	ENST00000537304.6	protein_coding	2/3			chr12	TogoVar
LMO3_chr12_16543372_16611162	16566023	TATATATA others(11): Show TATATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0277 a0001c0001t0001g0277	1	354	0.0028	-18	c.207 others(35): Show c.207-5503_207-5486delTTATATATATATATATAT	LMO3	ENSG00000048540.16	transcript	ENST00000537304.6	protein_coding	2/3			chr12	TogoVar
LMO7_chr13_75631330_75864866	75652614	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01070.hp1 HG01433.hp2 HG00280.hp1 HG01070.hp1 HG01433.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0141 a0003c0002t0001g0157 a0003c0002t0001g0158 a0003c0002t0001g0141 a0003c0002t0001g0157 a0003c0002t0001g0158	3	272	0.0110	-18	c.69+ others(35): Show c.69+15915_69+15932delGTGTGTGTGTGTGTGTGT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	1/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMO7_chr13_75631330_75864866	75681718	GTATATAT others(11): Show GTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0025 a0001c0001t0002g0025	1	272	0.0037	-18	c.70- others(35): Show c.70-31450_70-31433delATATATATATATATATAT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	1/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMO7_chr13_75631330_75864866	75751149	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03579.hp1 NA19043.hp1 HG03579.hp1 NA19043.hp1	a0002 a0009 a0002 a0009	a0002c0007 a0009c0010 a0002c0007 a0009c0010	a0002c0007t0003 a0009c0010t0003 a0002c0007t0003 a0009c0010t0003	a0002c0007t0003g0173 a0009c0010t0003g0244 a0002c0007t0003g0173 a0009c0010t0003g0244	2	272	0.0074	-18	c.211 others(35): Show c.211-9771_211-9754delTTTTTTTTTTTTTTTTTT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	3/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMO7_chr13_75631330_75864866	75757790	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00639.hp2 HG01952.hp2 HG00609.hp1 HG00639.hp2 HG01952.hp2	a0001 a0002 a0015 a0001 a0002 a0015	a0001c0001 a0002c0007 a0015c0028 a0001c0001 a0002c0007 a0015c0028	a0001c0001t0001 a0002c0007t0001 a0015c0028t0004 a0001c0001t0001 a0002c0007t0001 a0015c0028t0004	a0001c0001t0001g0201 a0002c0007t0001g0129 a0015c0028t0004g0133 a0001c0001t0001g0201 a0002c0007t0001g0129 a0015c0028t0004g0133	3	272	0.0110	-18	c.211 others(35): Show c.211-3108_211-3091delGTGTGTGTGTGTGTGTGT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	3/30		INFO_REALIGN_3_PRIME	chr13	TogoVar

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