Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
MRPS28_chr8_79913717_80035259	79991909	GCTCTCTC others(11): Show GCTCTCTCTCTCTCTCTCT	G G	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG06807.hp1 NA18941.hp2 others(3): Show HG02630.hp2 HG06807.hp1 NA18941.hp2 NA19062.hp1 NA19085.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0001 a0001c0010t0001 a0001c0001t0001 a0001c0010t0001	a0001c0001t0001g0034 a0001c0001t0001g0126 a0001c0001t0001g0145 others(3): Show a0001c0001t0001g0034 a0001c0001t0001g0126 a0001c0001t0001g0145 a0001c0001t0001g0218 a0001c0001t0001g0252 a0001c0010t0001g0294	6	300	0.0200	-18	c.395 others(37): Show c.395+11072_395+11089delAGAGAGAGAGAGAGAGAG		MRPS28	ENSG00000147586.10	transcript	ENST00000276585.9	protein_coding	2/2						chr8	TogoVar
MRPS2_chr9_135495682_135509671	135506797	GCCCTCTG others(11): Show GCCCTCTGCTGATGTGGGC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18953.hp2 NA18953.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	406	0.0025	-18	c.26 others(29): Show c.2665_*2682delCCCTCTGCTGATGTGGGC		MRPS2	ENSG00000122140.13	transcript	ENST00000241600.10	protein_coding					2127		chr9	TogoVar
MRPS31_chr13_40724128_40776190	40762781	ATTGTGTG others(11): Show ATTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0279 a0001c0001t0001g0279	1	404	0.0025	-18	c.441 others(35): Show c.441-3693_441-3676delACACACACACACACACAA		MRPS31	ENSG00000102738.8	transcript	ENST00000323563.8	protein_coding	2/6						chr13	TogoVar
MRPS31_chr13_40724128_40776190	40762782	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00558.hp2 HG00673.hp2 others(47): Show HG00438.hp1 HG00558.hp2 HG00673.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01255.hp2 HG01975.hp1 HG02004.hp2 HG02056.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02145.hp1 HG02273.hp2 HG02280.hp1 HG02451.hp2 HG02738.hp2 HG02886.hp2 HG02970.hp2 HG03041.hp1 HG03209.hp2 HG03486.hp1 HG03654.hp2 HG03831.hp2 HG03942.hp2 HG04184.hp2 NA18940.hp2 NA18942.hp2 NA18952.hp1 NA18956.hp2 NA18963.hp1 NA18966.hp1 NA18967.hp1 NA18971.hp2 NA18972.hp1 NA18990.hp2 NA18999.hp1 NA19000.hp1 NA19003.hp1 NA19005.hp1 NA19010.hp1 NA19056.hp2 NA19062.hp1 NA19063.hp2 NA19078.hp2 NA19084.hp1 NA19240.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003 a0003c0007	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0002c0003t0001 a0003c0007t0001	a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0291 others(31): Show a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0002t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0008 a0001c0002t0001g0009 a0001c0002t0001g0022 a0001c0002t0001g0024 a0001c0002t0001g0025 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0055 a0001c0002t0001g0069 a0001c0002t0001g0072 a0001c0004t0001g0007 a0001c0004t0001g0124 a0001c0004t0001g0344 a0001c0004t0001g0356 a0001c0004t0001g0358 a0002c0003t0001g0080 a0003c0007t0001g0269	50	404	0.1238	-18	c.441 others(35): Show c.441-3694_441-3677delCACACACACACACACACA		MRPS31	ENSG00000102738.8	transcript	ENST00000323563.8	protein_coding	2/6						chr13	TogoVar
MRPS31_chr13_40724128_40776190	40769373	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02809.hp2 HG03209.hp1 HG02683.hp1 HG02809.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0353 a0001c0001t0001g0354 a0001c0001t0001g0355 a0001c0001t0001g0353 a0001c0001t0001g0354 a0001c0001t0001g0355	3	404	0.0074	-18	c.152 others(35): Show c.152+1594_152+1611delATATATATATATATATAT		MRPS31	ENSG00000102738.8	transcript	ENST00000323563.8	protein_coding	1/6						chr13	TogoVar
MRPS35_chr12_27705832_27761295	27732987	GATATATA others(11): Show GATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00438.hp2 HG00544.hp2 others(21): Show HG00280.hp1 HG00438.hp2 HG00544.hp2 HG01255.hp2 HG01358.hp1 HG02027.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG03139.hp2 HG03710.hp2 HG03831.hp1 NA18941.hp2 NA18950.hp1 NA18951.hp1 NA18954.hp2 NA18957.hp1 NA18960.hp2 NA18995.hp1 NA18999.hp1 NA19005.hp2 NA19060.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0005 a0001c0001 a0002c0002 a0004c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0002c0002t0002 a0004c0005t0001	a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0073 others(18): Show a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0121 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0160 a0001c0001t0003g0026 a0001c0001t0003g0162 a0001c0001t0004g0123 a0001c0001t0004g0124 a0002c0002t0002g0047 a0004c0005t0001g0118	24	358	0.0670	-18	c.523 others(35): Show c.523-2423_523-2406delATATATATATATATATAT		MRPS35	ENSG00000061794.13	transcript	ENST00000081029.8	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr12	TogoVar
MRRF_chr9_122259882_122336337	122325631	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01891.hp2 HG02109.hp1 HG02257.hp1 others(3): Show HG01891.hp2 HG02109.hp1 HG02257.hp1 HG02723.hp1 HG03225.hp1 HG03688.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0030 a0001c0001t0078 a0001c0001t0099 others(2): Show a0001c0001t0030 a0001c0001t0078 a0001c0001t0099 a0001c0001t0100 a0004c0005t0079	a0001c0001t0030g0068 a0001c0001t0030g0194 a0001c0001t0078g0025 others(3): Show a0001c0001t0030g0068 a0001c0001t0030g0194 a0001c0001t0078g0025 a0001c0001t0099g0195 a0001c0001t0100g0040 a0004c0005t0079g0193	6	264	0.0227	-18	c.30 others(29): Show c.3051_*3068delGTGTGTGTGTGTGTGTGT		MRRF	ENSG00000148187.18	transcript	ENST00000344641.8	protein_coding	7/7				3051	INFO_REALIGN_3_PRIME	chr9	TogoVar
MRTFA_chr22_40405289_40641719	40457423	TGAAAGAA others(11): Show TGAAAGAAAGAAAGAGAAA	T T	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG02080.hp1 HG02155.hp2 others(5): Show HG01123.hp2 HG02080.hp1 HG02155.hp2 HG03710.hp2 NA18964.hp2 NA18970.hp2 NA19068.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0013 a0001c0001 a0001c0003 a0001c0013	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0013t0001	a0001c0001t0001g0016 a0001c0001t0002g0017 a0001c0001t0002g0039 others(5): Show a0001c0001t0001g0016 a0001c0001t0002g0017 a0001c0001t0002g0039 a0001c0001t0002g0052 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0003t0001g0075 a0001c0013t0001g0056	8	256	0.0313	-18	c.307 others(35): Show c.307+5780_307+5797delTTTCTCTTTCTTTCTTTC		MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	4/14					WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40466849	AATTTATG others(11): Show AATTTATGAAAGCTAACAC	A A	intron_variant intron_variant	MODIFIER	HG00558.hp2 NA18612.hp1 NA18943.hp1 others(3): Show HG00558.hp2 NA18612.hp1 NA18943.hp1 NA18960.hp1 NA18971.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0022 others(3): Show a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0046	6	256	0.0234	-18	c.242 others(35): Show c.242-3581_242-3564delGTGTTAGCTTTCATAAAT		MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	3/14					WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40470229	TTTTATAT others(11): Show TTTTATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 NA18964.hp2 HG00423.hp1 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0035 a0001c0001t0002g0057 a0001c0001t0002g0035 a0001c0001t0002g0057	2	256	0.0078	-18	c.242 others(35): Show c.242-6961_242-6944delTATATATATATATATAAA		MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	3/14					WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40470231	TTATATAT others(11): Show TTATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02896.hp2 NA18970.hp1 others(2): Show HG02040.hp1 HG02896.hp2 NA18970.hp1 NA19074.hp1 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0023 a0001c0001 a0001c0002 a0001c0023	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0023t0003	a0001c0001t0001g0200 a0001c0001t0003g0175 a0001c0001t0003g0178 others(2): Show a0001c0001t0001g0200 a0001c0001t0003g0175 a0001c0001t0003g0178 a0001c0002t0001g0158 a0001c0023t0003g0203	5	256	0.0195	-18	c.242 others(35): Show c.242-6963_242-6946delTATATATATATATATATA		MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	3/14					WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40571026	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02145.hp2 HG02258.hp2 others(8): Show HG02109.hp2 HG02145.hp2 HG02258.hp2 HG02451.hp2 HG02572.hp1 HG02615.hp2 HG02723.hp1 HG02809.hp2 HG02886.hp1 HG03130.hp2 HG06807.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0010 others(1): Show a0001c0002 a0001c0003 a0001c0010 a0001c0012	a0001c0002t0001 a0001c0003t0001 a0001c0010t0001 others(1): Show a0001c0002t0001 a0001c0003t0001 a0001c0010t0001 a0001c0012t0001	a0001c0002t0001g0007 a0001c0003t0001g0008 a0001c0003t0001g0009 others(8): Show a0001c0002t0001g0007 a0001c0003t0001g0008 a0001c0003t0001g0009 a0001c0003t0001g0010 a0001c0003t0001g0012 a0001c0003t0001g0013 a0001c0003t0001g0014 a0001c0010t0001g0005 a0001c0012t0001g0002 a0001c0012t0001g0003 a0001c0012t0001g0004	11	256	0.0430	-18	c.-21 others(37): Show c.-21-18677_-21-18660delTTTTTTTTTTTTTTTTTT		MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	2/14					WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40637657	ATGTATAT others(11): Show ATGTATATGTATGTGTATG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 NA19011.hp2 HG00408.hp1 NA19011.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0002 a0001c0004t0001 a0001c0004t0002	a0001c0004t0001g0128 a0001c0004t0002g0157 a0001c0004t0001g0128 a0001c0004t0002g0157	2	256	0.0078	-18	c.-12 others(29): Show c.-1281_-1264delCATACACATACATATACA		MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding					939	WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40637705	GTGTATAT others(11): Show GTGTATATGTATATGTATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0139 a0001c0010t0001g0139	1	256	0.0039	-18	c.-13 others(29): Show c.-1329_-1312delTATACATATACATATACA		MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding					987	WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFB_chr16_14066319_14271773	14112119	ATAAAGAA others(11): Show ATAAAGAAACAATGGGGTT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG01109.hp2 others(66): Show HG00408.hp1 HG00423.hp1 HG01109.hp2 HG01255.hp2 HG01261.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02080.hp1 HG02083.hp2 HG02129.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02258.hp2 HG02451.hp1 HG02523.hp2 HG02602.hp1 HG02698.hp2 HG02723.hp1 HG02970.hp1 HG03579.hp1 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03942.hp1 NA18612.hp1 NA18940.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18951.hp2 NA18953.hp2 NA18962.hp1 NA18969.hp1 NA18970.hp1 NA18972.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp2 NA18977.hp1 NA18978.hp1 NA18982.hp1 NA18989.hp1 NA18991.hp1 NA18993.hp1 NA18994.hp2 NA18999.hp2 NA19000.hp1 NA19003.hp1 NA19004.hp1 NA19006.hp1 NA19058.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp1 NA19070.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp1 NA20805.hp1 NA20905.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0002 a0001c0004 a0001c0015 others(2): Show a0001c0002 a0001c0004 a0001c0015 a0004c0006 a0007c0005	a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 others(6): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0011 a0001c0002t0031 a0001c0004t0002 a0001c0015t0002 a0004c0006t0002 a0007c0005t0002	a0001c0002t0001g0206 a0001c0002t0002g0001 a0001c0002t0002g0004 others(65): Show a0001c0002t0001g0206 a0001c0002t0002g0001 a0001c0002t0002g0004 a0001c0002t0002g0005 a0001c0002t0002g0007 a0001c0002t0002g0008 a0001c0002t0002g0009 a0001c0002t0002g0010 a0001c0002t0002g0011 a0001c0002t0002g0013 a0001c0002t0002g0014 a0001c0002t0002g0015 a0001c0002t0002g0020 a0001c0002t0002g0022 a0001c0002t0002g0024 a0001c0002t0002g0025 a0001c0002t0002g0026 a0001c0002t0002g0028 a0001c0002t0002g0029 a0001c0002t0002g0030 a0001c0002t0002g0031 a0001c0002t0002g0033 a0001c0002t0002g0034 a0001c0002t0002g0035 a0001c0002t0002g0036 a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0002t0002g0039 a0001c0002t0002g0040 a0001c0002t0002g0042 a0001c0002t0002g0043 a0001c0002t0002g0044 a0001c0002t0002g0045 a0001c0002t0002g0046 a0001c0002t0002g0048 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0054 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0058 a0001c0002t0002g0059 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0062 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0119 a0001c0002t0002g0223 a0001c0002t0002g0224 a0001c0002t0005g0006 a0001c0002t0005g0016 a0001c0002t0005g0017 a0001c0002t0005g0018 a0001c0002t0005g0019 a0001c0002t0005g0021 a0001c0002t0005g0023 a0001c0002t0005g0027 a0001c0002t0005g0066 a0001c0002t0011g0041 a0001c0002t0011g0047 a0001c0002t0011g0051 a0001c0002t0031g0012 a0001c0004t0002g0032 a0001c0015t0002g0053 a0004c0006t0002g0052 a0007c0005t0002g0065	69	240	0.2875	-18	c.-63 others(37): Show c.-63-28420_-63-28403delGAAACAATGGGGTTTAAA		MRTFB	ENSG00000186260.17	transcript	ENST00000571589.6	protein_coding	2/16					INFO_REALIGN_3_PRIME	chr16	TogoVar
MRTFB_chr16_14066319_14271773	14141354	AATACTGT others(11): Show AATACTGTCAATTTTTAAC	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG03486.hp2 HG00639.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0033 a0001c0001t0003 a0001c0001t0033	a0001c0001t0003g0082 a0001c0001t0033g0081 a0001c0001t0003g0082 a0001c0001t0033g0081	2	240	0.0083	-18	c.154 others(33): Show c.154+598_154+615delCTGTCAATTTTTAACATA		MRTFB	ENSG00000186260.17	transcript	ENST00000571589.6	protein_coding	3/16					INFO_REALIGN_3_PRIME	chr16	TogoVar
MRTFB_chr16_14066319_14271773	14241964	CAATAATA others(11): Show CAATAATAATAATAATAAT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01167.hp1 HG01515.hp1 others(18): Show HG01074.hp1 HG01167.hp1 HG01515.hp1 HG01516.hp1 HG01884.hp2 HG01891.hp2 HG02109.hp2 HG02145.hp1 HG02257.hp2 HG02622.hp2 HG02723.hp2 HG03041.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03540.hp1 HG03710.hp2 HG06807.hp2 NA18522.hp2 NA20905.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0010 others(1): Show a0001c0001 a0001c0003 a0001c0010 a0003c0009	a0001c0001t0006 a0001c0001t0008 a0001c0003t0003 others(2): Show a0001c0001t0006 a0001c0001t0008 a0001c0003t0003 a0001c0010t0018 a0003c0009t0019	a0001c0001t0006g0111 a0001c0001t0006g0112 a0001c0001t0006g0216 others(18): Show a0001c0001t0006g0111 a0001c0001t0006g0112 a0001c0001t0006g0216 a0001c0001t0008g0109 a0001c0001t0008g0110 a0001c0001t0008g0113 a0001c0001t0008g0114 a0001c0001t0008g0115 a0001c0003t0003g0083 a0001c0003t0003g0084 a0001c0003t0003g0085 a0001c0003t0003g0086 a0001c0003t0003g0087 a0001c0003t0003g0088 a0001c0003t0003g0089 a0001c0003t0003g0090 a0001c0003t0003g0091 a0001c0003t0003g0092 a0001c0003t0003g0093 a0001c0010t0018g0094 a0003c0009t0019g0238	21	240	0.0875	-18	c.107 others(37): Show c.1079+1511_1079+1528delAATAATAATAATAATAAT		MRTFB	ENSG00000186260.17	transcript	ENST00000571589.6	protein_coding	10/16					INFO_REALIGN_3_PRIME	chr16	TogoVar
MS4A12_chr11_60487778_60512430	60490868	GTCCCTCT others(11): Show GTCCCTCTCCCTGTCCCTC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG00733.hp2 HG01192.hp1 others(15): Show HG00558.hp2 HG00733.hp2 HG01192.hp1 HG01361.hp2 HG01928.hp2 HG01978.hp2 HG01981.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02135.hp2 HG02155.hp2 HG02273.hp2 NA18998.hp2 NA19007.hp2 NA19009.hp1 NA19054.hp1 NA19077.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0007 a0001c0003t0002g0041 a0001c0003t0002g0047 others(3): Show a0001c0003t0002g0007 a0001c0003t0002g0041 a0001c0003t0002g0047 a0001c0003t0002g0048 a0001c0003t0002g0056 a0001c0003t0002g0057	18	432	0.0417	-18	c.-19 others(29): Show c.-1966_-1949delTCCCTCTCCCTGTCCCTC		MS4A12	ENSG00000071203.9	transcript	ENST00000016913.8	protein_coding					1909		chr11	TogoVar
MS4A14_chr11_60391459_60422756	60418991	ATATATAT others(11): Show ATATATATATATATGTATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	428	0.0023	-18	c.19 others(29): Show c.1984_*2001delTATATATATATATGTATG		MS4A14	ENSG00000166928.11	transcript	ENST00000300187.11	protein_coding					1236		chr11	TogoVar
MS4A3_chr11_60051665_60076115	60058506	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02486.hp1 HG03453.hp1 others(2): Show HG02280.hp1 HG02486.hp1 HG03453.hp1 HG06807.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0021 a0001c0001t0001g0099 a0001c0002t0002g0100 a0001c0001t0001g0021 a0001c0001t0001g0099 a0001c0002t0002g0100	5	408	0.0123	-18	c.-16 others(35): Show c.-16+1785_-16+1802delAAAAAAAAAAAAAAAAAA		MS4A3	ENSG00000149516.15	transcript	ENST00000278865.8	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A4A_chr11_60275666_60313970	60289577	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01258.hp2 HG01515.hp1 others(1): Show HG01256.hp1 HG01258.hp2 HG01515.hp1 HG01517.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0041 a0003c0003t0002g0194 a0003c0003t0002g0195 a0003c0003t0002g0041 a0003c0003t0002g0194 a0003c0003t0002g0195	4	430	0.0093	-18	c.42- others(33): Show c.42-2630_42-2613delATGTGTGTGTGTGTGTGT		MS4A4A	ENSG00000110079.19	transcript	ENST00000337908.5	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A4A_chr11_60275666_60313970	60294892	ACTTCTTC others(11): Show ACTTCTTCTTCTTCTTCTT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01070.hp1 HG01071.hp1 others(10): Show HG00738.hp2 HG01070.hp1 HG01071.hp1 HG01175.hp1 HG02083.hp2 HG02300.hp1 HG02602.hp1 NA18945.hp2 NA18946.hp2 NA18969.hp2 NA18992.hp2 NA19010.hp2 NA19074.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0070 others(8): Show a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0099 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0002c0002t0002g0227 a0002c0002t0002g0236	13	430	0.0302	-18	c.202 others(35): Show c.202-2263_202-2246delTCTTCTTCTTCTTCTTCT		MS4A4A	ENSG00000110079.19	transcript	ENST00000337908.5	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A4E_chr11_60195270_60248137	60195587	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0002 a0004c0005t0002	a0004c0005t0002g0307 a0004c0005t0002g0307	1	410	0.0024	-18	c.59 others(29): Show c.5938_*5955delCACACACACACACACACA		MS4A4E	ENSG00000214787.11	transcript	ENST00000651255.1	protein_coding					4682		chr11	TogoVar
MS4A4E_chr11_60195270_60248137	60195619	GTGTGTGT others(11): Show GTGTGTGTGTGTATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp1 HG02258.hp2 HG01175.hp1 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0015 a0001c0002t0014 a0001c0001t0015 a0001c0002t0014	a0001c0001t0015g0131 a0001c0002t0014g0314 a0001c0001t0015g0131 a0001c0002t0014g0314	2	410	0.0049	-18	c.59 others(29): Show c.5906_*5923delTATATATACACACACACA		MS4A4E	ENSG00000214787.11	transcript	ENST00000651255.1	protein_coding					4650		chr11	TogoVar
MS4A6E_chr11_60322255_60346341	60342174	TGTGTGAG others(11): Show TGTGTGAGAGAGAGAGAGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0116 a0001c0001t0007g0116	1	450	0.0022	-18	c.14 others(29): Show c.1409_*1426delGTGTGAGAGAGAGAGAGA		MS4A6E	ENSG00000166926.9	transcript	ENST00000684409.1	protein_coding					834		chr11	TogoVar
MSANTD2_chr11_124761498_124805406	124802353	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0015 a0001c0001t0003g0015	1	324	0.0031	-18	c.-19 others(29): Show c.-1991_-1974delACACACACACACACACAC		MSANTD2	ENSG00000120458.13	transcript	ENST00000374979.8	protein_coding					1948		chr11	TogoVar
MSH2_chr2_47398156_47488223	47413548	GTTTTTTT others(11): Show GTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0368 a0001c0001t0001g0368	1	370	0.0027	-18	c.793 others(33): Show c.793-705_793-688delTTTTTTTTTTTTTTTTTT		MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	4/15					INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47449015	CAAAAAAA others(11): Show CAAAAAAAAAAACAAACAA	C C	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01106.hp2 HG01255.hp1 others(10): Show HG01071.hp2 HG01106.hp2 HG01255.hp1 HG01261.hp1 HG01346.hp2 HG01433.hp2 HG01517.hp2 HG02071.hp2 HG02738.hp2 HG03490.hp1 HG03492.hp1 NA18959.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0001 a0001c0009t0001 a0001c0001t0001 a0001c0009t0001	a0001c0001t0001g0148 a0001c0001t0001g0163 a0001c0001t0001g0167 others(10): Show a0001c0001t0001g0148 a0001c0001t0001g0163 a0001c0001t0001g0167 a0001c0001t0001g0231 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0009t0001g0274 a0001c0009t0001g0275	13	370	0.0351	-18	c.138 others(37): Show c.1386+3370_1386+3387delCAAACAAAAAAAAAAAAA		MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15					INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH3_chr5_80649652_80881815	80654880	TGCAGCGG others(11): Show TGCAGCGGCTGCAGCGGCC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	NA18952.hp2 NA18974.hp2 NA18999.hp2 others(2): Show NA18952.hp2 NA18974.hp2 NA18999.hp2 NA19060.hp1 NA19084.hp2	a0007 a0007	a0007c0009 a0007c0009	a0007c0009t0002 a0007c0009t0016 a0007c0009t0002 a0007c0009t0016	a0007c0009t0002g0041 a0007c0009t0002g0066 a0007c0009t0002g0076 others(2): Show a0007c0009t0002g0041 a0007c0009t0002g0066 a0007c0009t0002g0076 a0007c0009t0002g0081 a0007c0009t0016g0040	5	362	0.0138	-18	c.162 others(25): Show c.162_179delTGCAGCGGCCGCAGCGGC	p.Ala others(11): Show p.Ala55_Ala60del	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	1/24	238/4443	162/3414	54/1137		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80748691	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18999.hp1 NA18999.hp1	a0017 a0017	a0017c0020 a0017c0020	a0017c0020t0001 a0017c0020t0001	a0017c0020t0001g0133 a0017c0020t0001g0133	1	362	0.0028	-18	c.176 others(37): Show c.1763+4101_1763+4118delACACACACACACACACAC		MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	12/23					INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH4_chr1_75791882_75918242	75896346	AACACACA others(11): Show AACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(50): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00423.hp2 HG00642.hp1 HG00735.hp2 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01168.hp2 HG01346.hp1 HG01433.hp1 HG01496.hp1 HG01891.hp2 HG01978.hp1 HG01981.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02683.hp1 HG02809.hp1 HG02965.hp1 HG03041.hp1 HG03139.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03688.hp1 HG03704.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp2 HG04228.hp2 NA18944.hp1 NA18977.hp2 NA18985.hp1 NA19011.hp2 NA19057.hp2 NA19074.hp1 NA19078.hp1 NA19089.hp2 NA20752.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0002c0009 a0001c0002 a0002c0003 a0002c0009	a0001c0002t0001 a0002c0003t0001 a0002c0009t0001 a0001c0002t0001 a0002c0003t0001 a0002c0009t0001	a0001c0002t0001g0002 a0002c0003t0001g0001 a0002c0003t0001g0003 others(49): Show a0001c0002t0001g0002 a0002c0003t0001g0001 a0002c0003t0001g0003 a0002c0003t0001g0010 a0002c0003t0001g0017 a0002c0003t0001g0085 a0002c0003t0001g0086 a0002c0003t0001g0088 a0002c0003t0001g0089 a0002c0003t0001g0090 a0002c0003t0001g0091 a0002c0003t0001g0092 a0002c0003t0001g0093 a0002c0003t0001g0094 a0002c0003t0001g0096 a0002c0003t0001g0097 a0002c0003t0001g0098 a0002c0003t0001g0099 a0002c0003t0001g0101 a0002c0003t0001g0102 a0002c0003t0001g0103 a0002c0003t0001g0104 a0002c0003t0001g0105 a0002c0003t0001g0106 a0002c0003t0001g0109 a0002c0003t0001g0110 a0002c0003t0001g0111 a0002c0003t0001g0112 a0002c0003t0001g0113 a0002c0003t0001g0114 a0002c0003t0001g0115 a0002c0003t0001g0117 a0002c0003t0001g0118 a0002c0003t0001g0119 a0002c0003t0001g0120 a0002c0003t0001g0123 a0002c0003t0001g0124 a0002c0003t0001g0125 a0002c0003t0001g0126 a0002c0003t0001g0128 a0002c0003t0001g0129 a0002c0003t0001g0132 a0002c0003t0001g0140 a0002c0003t0001g0141 a0002c0003t0001g0142 a0002c0003t0001g0143 a0002c0003t0001g0144 a0002c0003t0001g0145 a0002c0003t0001g0146 a0002c0003t0001g0147 a0002c0003t0001g0155 a0002c0009t0001g0127	53	332	0.1596	-18	c.235 others(37): Show c.2356-1530_2356-1513delACACACACACACACACAC		MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	17/19					INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75902673	GTATATAT others(11): Show GTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03831.hp2 NA18982.hp1 others(1): Show HG02717.hp1 HG03831.hp2 NA18982.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0205 a0001c0001t0001g0238 a0001c0001t0001g0251 others(1): Show a0001c0001t0001g0205 a0001c0001t0001g0238 a0001c0001t0001g0251 a0001c0004t0001g0024	4	332	0.0121	-18	c.261 others(37): Show c.2619+3012_2619+3029delTATATATATATATATATA		MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	19/19					INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH5_chr6_31735005_31767676	31739111	AACACACA others(11): Show AACACACACACACACACAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01943.hp1 HG02300.hp2 HG01943.hp1 HG02300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0028 a0001c0002t0001g0137 a0001c0002t0001g0028 a0001c0002t0001g0137	2	397	0.0050	-18	c.-96 others(27): Show c.-964_-947delACACACACACACACACAC		MSH5	ENSG00000204410.16	transcript	ENST00000375750.9	protein_coding					893		chr6	TogoVar
MSH5_chr6_31735005_31767676	31741336	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02071.hp1 HG02486.hp1 others(10): Show HG01891.hp1 HG02071.hp1 HG02486.hp1 HG02683.hp1 HG02698.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp2 HG02965.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0004 a0001c0002t0001g0310 a0001c0002t0001g0311 others(6): Show a0001c0002t0001g0004 a0001c0002t0001g0310 a0001c0002t0001g0311 a0001c0002t0001g0312 a0001c0002t0001g0313 a0001c0002t0001g0314 a0001c0002t0001g0315 a0001c0002t0001g0316 a0001c0002t0001g0317	13	397	0.0328	-18	c.271 others(31): Show c.271+80_271+97delCACACACACACACACACA		MSH5	ENSG00000204410.16	transcript	ENST00000375750.9	protein_coding	3/24					INFO_REALIGN_3_PRIME	chr6	TogoVar
MSH6_chr2_47778145_47811953	47788906	CCTTTTTT others(11): Show CCTTTTTTTTTTTTTTGTT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02129.hp2 NA19002.hp1 others(1): Show HG01074.hp2 HG02129.hp2 NA19002.hp1 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0100 a0001c0001t0001g0181 a0001c0001t0001g0182 others(1): Show a0001c0001t0001g0100 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0002g0333	4	390	0.0103	-18	c.261 others(35): Show c.261-2020_261-2003delCTTTTTTTTTTTTTTGTT		MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	1/9						chr2	TogoVar
MSI1_chr12_120336330_120374164	120361204	GGTCAATC others(11): Show GGTCAATCATTTTTTGAAT	G G	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0162	1	348	0.0029	-18	c.402 others(35): Show c.402+1821_402+1838delATTCAAAAAATGATTGAC		MSI1	ENSG00000135097.7	transcript	ENST00000257552.7	protein_coding	6/14						chr12	TogoVar
MSI2_chr17_57251523_57689689	57347486	GCATGTGT others(11): Show GCATGTGTTCAGACCCCTT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02258.hp1 HG02559.hp1 HG01891.hp2 HG02258.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0064 a0001c0001t0092 a0001c0001t0026 a0001c0001t0064 a0001c0001t0092	a0001c0001t0026g0148 a0001c0001t0064g0062 a0001c0001t0092g0114 a0001c0001t0026g0148 a0001c0001t0064g0062 a0001c0001t0092g0114	3	168	0.0179	-18	c.313 others(37): Show c.313-53888_313-53871delTGTTCAGACCCCTTCATG		MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	5/13					INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57440413	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0096 a0001c0001t0096	a0001c0001t0096g0033 a0001c0001t0096g0033	1	168	0.0060	-18	c.405 others(37): Show c.405+38979_405+38996delGTGTGTGTGTGTGTGTGT		MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13					INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57477145	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01258.hp1 HG01981.hp1 others(6): Show HG00673.hp2 HG01258.hp1 HG01981.hp1 NA18986.hp1 NA18994.hp2 NA19000.hp1 NA19065.hp1 NA19081.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0016 a0001c0001t0018 a0001c0001t0042 a0001c0001t0061 a0001c0001t0082 a0001c0002t0020	a0001c0001t0001g0010 a0001c0001t0003g0054 a0001c0001t0006g0104 others(6): Show a0001c0001t0001g0010 a0001c0001t0003g0054 a0001c0001t0006g0104 a0001c0001t0016g0154 a0001c0001t0018g0158 a0001c0001t0042g0011 a0001c0001t0061g0105 a0001c0001t0082g0107 a0001c0002t0020g0126	9	168	0.0536	-18	c.406 others(37): Show c.406-52492_406-52475delGTGTGTGTGTGTGTGTGT		MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13					INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57502602	GATATATA others(11): Show GATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02723.hp1 HG01243.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0013 a0001c0001t0007 a0001c0001t0013	a0001c0001t0007g0050 a0001c0001t0013g0133 a0001c0001t0007g0050 a0001c0001t0013g0133	2	168	0.0119	-18	c.406 others(37): Show c.406-27056_406-27039delTATATATATATATATATA		MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13					INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57547741	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00609.hp2 HG00673.hp1 others(15): Show HG00423.hp1 HG00609.hp2 HG00673.hp1 HG01070.hp2 HG01109.hp2 HG01884.hp1 HG02083.hp1 HG02258.hp1 HG03453.hp1 HG04115.hp1 NA18939.hp2 NA18945.hp1 NA18948.hp1 NA18964.hp2 NA19000.hp1 NA19060.hp2 NA19081.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0029 a0001c0001t0031 a0001c0001t0034 a0001c0001t0042 a0001c0001t0051 a0001c0001t0057 a0001c0001t0077 a0001c0001t0086 a0001c0001t0090 a0001c0001t0092	a0001c0001t0001g0010 a0001c0001t0001g0142 a0001c0001t0002g0099 others(15): Show a0001c0001t0001g0010 a0001c0001t0001g0142 a0001c0001t0002g0099 a0001c0001t0003g0135 a0001c0001t0005g0043 a0001c0001t0007g0079 a0001c0001t0010g0124 a0001c0001t0010g0168 a0001c0001t0029g0149 a0001c0001t0031g0075 a0001c0001t0034g0161 a0001c0001t0042g0011 a0001c0001t0051g0125 a0001c0001t0057g0144 a0001c0001t0077g0046 a0001c0001t0086g0063 a0001c0001t0090g0057 a0001c0001t0092g0114	18	168	0.1071	-18	c.454 others(37): Show c.454+18048_454+18065delACACACACACACACACAC		MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	7/13					INFO_REALIGN_3_PRIME	chr17	TogoVar
MSL1_chr17_40116971_40141917	40118724	CATATATA others(11): Show CATATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	356	0.0028	-18	c.-38 others(29): Show c.-3888_-3871delATATATATATATATATAT		MSL1	ENSG00000188895.12	transcript	ENST00000398532.9	protein_coding					3246		chr17	TogoVar
MSN_chrX_65662654_65746931	65670896	TTATATAT others(11): Show TTATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0148 a0001c0001t0001g0148	1	170	0.0059	-18	c.12+ others(33): Show c.12+3085_12+3102delATATATATATATATATAT		MSN	ENSG00000147065.18	transcript	ENST00000360270.7	protein_coding	1/12					INFO_REALIGN_3_PRIME	chrX	TogoVar
MSR1_chr8_16102881_16197651	16108184	TAATAGTA others(11): Show TAATAGTACTAGTAATAGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01168.hp1 HG01169.hp2 HG01175.hp1 others(2): Show HG01168.hp1 HG01169.hp2 HG01175.hp1 HG03688.hp1 HG03831.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0013 a0001c0001t0036 a0002c0002t0013 a0001c0001t0013 a0001c0001t0036 a0002c0002t0013	a0001c0001t0013g0240 a0001c0001t0013g0247 a0001c0001t0013g0305 others(2): Show a0001c0001t0013g0240 a0001c0001t0013g0247 a0001c0001t0013g0305 a0001c0001t0036g0169 a0002c0002t0013g0127	5	330	0.0152	-18	c.18 others(29): Show c.1883_*1900delGCTATTACTAGTACTATT		MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	10/10				1883		chr8	TogoVar
MSR1_chr8_16102881_16197651	16139758	AAAAAAAA others(11): Show AAAAAAAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0292 a0001c0001t0001g0292	1	330	0.0030	-18	c.103 others(37): Show c.1033+3782_1033+3799delATTTTTTTTTTTTTTTTT		MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9						chr8	TogoVar
MSR1_chr8_16102881_16197651	16139762	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0049 a0001c0001t0006g0049	1	330	0.0030	-18	c.103 others(37): Show c.1033+3778_1033+3795delATATATTTTTTTTTTTTT		MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9						chr8	TogoVar
MSR1_chr8_16102881_16197651	16139766	AAAAAAAA others(11): Show AAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0048 a0001c0003t0048	a0001c0003t0048g0324 a0001c0003t0048g0324	1	330	0.0030	-18	c.103 others(37): Show c.1033+3774_1033+3791delATATATATATTTTTTTTT		MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9						chr8	TogoVar
MSR1_chr8_16102881_16197651	16139770	AAAAAATA others(11): Show AAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 NA19240.hp2 HG02717.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0298 a0001c0001t0001g0061 a0001c0001t0001g0298	2	330	0.0061	-18	c.103 others(37): Show c.1033+3770_1033+3787delATATATATATATATTTTT		MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9						chr8	TogoVar
MSR1_chr8_16102881_16197651	16139774	AATATATA others(11): Show AATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG01070.hp1 others(5): Show HG00280.hp1 HG00280.hp2 HG01070.hp1 HG01168.hp2 HG01257.hp1 HG01261.hp2 HG03704.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0009 a0001c0001 a0001c0007 a0001c0009	a0001c0001t0001 a0001c0001t0002 a0001c0007t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0007t0004 a0001c0009t0002	a0001c0001t0001g0229 a0001c0001t0001g0248 a0001c0001t0001g0271 others(5): Show a0001c0001t0001g0229 a0001c0001t0001g0248 a0001c0001t0001g0271 a0001c0001t0001g0278 a0001c0001t0001g0304 a0001c0001t0002g0234 a0001c0007t0004g0163 a0001c0009t0002g0274	8	330	0.0242	-18	c.103 others(37): Show c.1033+3766_1033+3783delATATATATATATATATAT		MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9						chr8	TogoVar
MSRA_chr8_10049292_10433891	10074058	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02280.hp2 HG02630.hp1 others(2): Show HG02258.hp1 HG02280.hp2 HG02630.hp1 HG02647.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0002t0002	a0001c0001t0001g0048 a0001c0001t0004g0052 a0001c0001t0007g0050 others(2): Show a0001c0001t0001g0048 a0001c0001t0004g0052 a0001c0001t0007g0050 a0001c0002t0002g0049 a0001c0002t0002g0051	5	286	0.0175	-18	c.142 others(37): Show c.142+19423_142+19440delTTTTTTTTTTTTTTTTTT		MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr8	TogoVar

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