Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C12orf42_chr12_103296955_103500968	103322121	GCGCGCAC others(11): Show GCGCGCACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	262	0.0038	-18	c.260 others(37): Show c.260-15794_260-15777delTGTGTGTGTGTGTGCGCG	C12orf42	ENSG00000179088.16	transcript	ENST00000548883.6	protein_coding	4/5			chr12	TogoVar
C12orf56_chr12_64259762_64395758	64358482	AATCATCA others(11): Show AATCATCATCATCATCATC	A A	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0002 a0002c0002t0009g0002	1	312	0.0032	-18	c.253 others(35): Show c.253-5444_253-5427delGATGATGATGATGATGAT	C12orf56	ENSG00000185306.13	transcript	ENST00000543942.7	protein_coding	1/12			chr12	TogoVar
C13orf46_chr13_113948705_113979076	113963227	GGCCCCTG others(11): Show GGCCCCTGTCCTCAGCCTC	G G	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01496.hp1 HG01952.hp2 others(1): Show HG01256.hp2 HG01496.hp1 HG01952.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0080 a0001c0001t0005 a0001c0001t0080	a0001c0001t0005g0029 a0001c0001t0005g0080 a0001c0001t0080g0081 a0001c0001t0005g0029 a0001c0001t0005g0080 a0001c0001t0080g0081	4	414	0.0097	-18	c.572 others(35): Show c.572+1682_572+1699delGAGGCTGAGGACAGGGGC	C13orf46	ENSG00000283199.3	transcript	ENST00000636427.3	protein_coding	6/6			chr13	TogoVar
C13orf46_chr13_113948705_113979076	113963497	GGCCCCTG others(11): Show GGCCCCTGTCCTCAGCCTC	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0075 a0001c0001t0019g0075	1	414	0.0024	-18	c.572 others(35): Show c.572+1412_572+1429delGAGGCTGAGGACAGGGGC	C13orf46	ENSG00000283199.3	transcript	ENST00000636427.3	protein_coding	6/6			chr13	TogoVar
C13orf46_chr13_113948705_113979076	113965779	ATGATGGT others(11): Show ATGATGGTAATTATAATGG	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02451.hp1 HG03098.hp1 others(1): Show HG00639.hp2 HG02451.hp1 HG03098.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0078 a0001c0001t0088 a0001c0001t0034 a0001c0001t0078 a0001c0001t0088	a0001c0001t0034g0055 a0001c0001t0078g0186 a0001c0001t0088g0246 a0001c0001t0034g0055 a0001c0001t0078g0186 a0001c0001t0088g0246	4	414	0.0097	-18	c.505 others(33): Show c.505-803_505-786delCCATTATAATTACCATCA	C13orf46	ENSG00000283199.3	transcript	ENST00000636427.3	protein_coding	5/6			chr13	TogoVar
C13orf46_chr13_113948705_113979076	113965994	AGTGGTGA others(11): Show AGTGGTGATGATGATGATG	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp1 NA18986.hp2 others(1): Show HG00423.hp2 HG00544.hp1 NA18986.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0053 a0001c0001t0058 a0001c0001t0001 a0001c0001t0053 a0001c0001t0058	a0001c0001t0001g0062 a0001c0001t0053g0229 a0001c0001t0058g0228 a0001c0001t0001g0062 a0001c0001t0053g0229 a0001c0001t0058g0228	4	414	0.0097	-18	c.505 others(35): Show c.505-1018_505-1001delCATCATCATCATCACCAC	C13orf46	ENSG00000283199.3	transcript	ENST00000636427.3	protein_coding	5/6			chr13	TogoVar
C14orf132_chr14_96034362_96098971	96070596	TCACACAC others(11): Show TCACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0018 a0001c0003t0018	a0001c0003t0018g0118 a0001c0003t0018g0118	1	372	0.0027	-18	c.28- others(35): Show c.28-15895_28-15878delACACACACACACACACAC	C14orf132	ENSG00000227051.7	transcript	ENST00000555004.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr14	TogoVar
C14orf39_chr14_60430956_60491063	60434451	AATGTTAT others(11): Show AATGTTATATTATAGTTAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01243.hp2 HG02055.hp1 others(5): Show HG01243.hp1 HG01243.hp2 HG02055.hp1 HG02486.hp1 HG02615.hp2 HG02895.hp2 HG02970.hp1 HG03209.hp2	a0003 a0008 a0003 a0008	a0003c0004 a0003c0006 a0008c0008 a0003c0004 a0003c0006 a0008c0008	a0003c0004t0002 a0003c0004t0003 a0003c0004t0005 others(2): Show a0003c0004t0002 a0003c0004t0003 a0003c0004t0005 a0003c0006t0003 a0008c0008t0005	a0003c0004t0002g0038 a0003c0004t0002g0168 a0003c0004t0003g0205 others(4): Show a0003c0004t0002g0038 a0003c0004t0002g0168 a0003c0004t0003g0205 a0003c0004t0005g0164 a0003c0006t0003g0203 a0003c0006t0003g0204 a0008c0008t0005g0163	8	294	0.0272	-18	c.23 others(29): Show c.2376_*2393delATAACTATAATATAACAT	C14orf39	ENSG00000179008.9	transcript	ENST00000321731.8	protein_coding		1504		chr14	TogoVar
C14orf39_chr14_60430956_60491063	60465851	AACACACA others(11): Show AACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02895.hp2 HG02970.hp1 HG02615.hp2 HG02895.hp2 HG02970.hp1	a0003 a0003	a0003c0004 a0003c0006 a0003c0004 a0003c0006	a0003c0004t0003 a0003c0006t0003 a0003c0004t0003 a0003c0006t0003	a0003c0004t0003g0205 a0003c0006t0003g0203 a0003c0006t0003g0204 a0003c0004t0003g0205 a0003c0006t0003g0203 a0003c0006t0003g0204	3	294	0.0102	-18	c.972 others(33): Show c.972+110_972+127delGTGTGTGTGTGTGTGTGT	C14orf39	ENSG00000179008.9	transcript	ENST00000321731.8	protein_coding	11/17			chr14	TogoVar
C15orf40_chr15_82989817_83016639	82999149	GGGGAGAG others(11): Show GGGGAGAGGGAGAGGGTGA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00642.hp2 HG00733.hp2 HG01168.hp1 others(17): Show HG00642.hp2 HG00733.hp2 HG01168.hp1 HG01192.hp2 HG01361.hp1 HG01978.hp1 HG02056.hp2 HG02451.hp1 HG02559.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG03098.hp2 HG03139.hp2 HG03209.hp1 HG03540.hp1 NA18906.hp2 NA19240.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0026 a0001c0001t0035 a0001c0001t0039 others(12): Show a0001c0001t0026 a0001c0001t0035 a0001c0001t0039 a0001c0001t0040 a0001c0001t0078 a0001c0001t0079 a0001c0001t0098 a0001c0001t0104 a0001c0001t0105 a0001c0001t0106 a0001c0001t0107 a0001c0001t0109 a0001c0001t0110 a0003c0003t0065 a0003c0003t0123	a0001c0001t0026g0020 a0001c0001t0035g0038 a0001c0001t0039g0034 others(12): Show a0001c0001t0026g0020 a0001c0001t0035g0038 a0001c0001t0039g0034 a0001c0001t0040g0033 a0001c0001t0078g0126 a0001c0001t0079g0064 a0001c0001t0098g0127 a0001c0001t0104g0067 a0001c0001t0105g0072 a0001c0001t0106g0068 a0001c0001t0107g0069 a0001c0001t0109g0128 a0001c0001t0110g0071 a0003c0003t0065g0204 a0003c0003t0123g0200	20	406	0.0493	-18	c.64 others(29): Show c.6430_*6447delTCACCCTCTCCCTCTCCC	C15orf40	ENSG00000169609.14	transcript	ENST00000304177.10	protein_coding	4/4	6430		chr15	TogoVar
C16orf46_chr16_81055980_81082238	81079747	AAAAAAAA others(11): Show AAAAAAAAAAAAGAAAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02559.hp2 HG02886.hp2 others(2): Show HG02055.hp2 HG02559.hp2 HG02886.hp2 HG02970.hp2 HG03486.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0002 a0005c0008t0002	a0005c0008t0002g0018 a0005c0008t0002g0052 a0005c0008t0002g0053 others(1): Show a0005c0008t0002g0018 a0005c0008t0002g0052 a0005c0008t0002g0053 a0005c0008t0002g0054	5	406	0.0123	-18	c.-27 others(29): Show c.-2757_-2740delCTTTTTCTTTTTTTTTTT	C16orf46	ENSG00000166455.14	transcript	ENST00000299578.10	protein_coding		2510		chr16	TogoVar
C16orf74_chr16_85702517_85756096	85710113	CACCGGGC others(11): Show CACCGGGCCCCCACAGCCG	C C	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0168 a0001c0001t0002g0168	1	410	0.0024	-18	c.172 others(31): Show c.172+33_172+50delCGGCTGTGGGGGCCCGGT	C16orf74	ENSG00000154102.11	transcript	ENST00000284245.9	protein_coding	3/3			chr16	TogoVar
C16orf89_chr16_5039122_5070956	5055938	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01975.hp2 HG02622.hp1 HG02976.hp1 HG01975.hp2 HG02622.hp1 HG02976.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0306 a0001c0001t0001g0313 a0002c0003t0001g0086 a0001c0001t0001g0306 a0001c0001t0001g0313 a0002c0003t0001g0086	3	432	0.0069	-18	c.763 others(32): Show c.763+97_763+114delACACACACACACACACAC	C16orf89	ENSG00000153446.16	transcript	ENST00000472572.8	protein_coding	5/7			chr16	TogoVar
C16orf90_chr16_3488484_3500489	3489112	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0014 a0002c0002t0009g0014	2	446	0.0045	-18	c.47 others(29): Show c.4709_*4726delAAAAAAAAAAAAAAAAAA	C16orf90	ENSG00000215131.11	transcript	ENST00000437192.8	protein_coding		4371		chr16	TogoVar
C16orf90_chr16_3488484_3500489	3490397	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 NA18954.hp1 NA18963.hp1 others(3): Show HG00408.hp2 NA18954.hp1 NA18963.hp1 NA18973.hp2 NA18993.hp1 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	6	446	0.0135	-18	c.34 others(29): Show c.3424_*3441delTTTTTTTTTTTTTTTTTT	C16orf90	ENSG00000215131.11	transcript	ENST00000437192.8	protein_coding		3086		chr16	TogoVar
C16orf96_chr16_4551340_4605758	4581141	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0014 a0014	a0014c0020 a0014c0020	a0014c0020t0007 a0014c0020t0007	a0014c0020t0007g0009 a0014c0020t0007g0009	1	278	0.0036	-18	c.235 others(37): Show c.2352+1042_2352+1059delTATATATATATATATATA	C16orf96	ENSG00000205832.8	transcript	ENST00000444310.5	protein_coding	7/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
C17orf114_chr17_4796159_4807328	4806768	GGCGCGTC others(11): Show GGCGCGTCCCCCGGGCGCC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	426	0.0024	-18	c.-44 others(29): Show c.-4467_-4450delGGCGCCCGGGGGACGCGC	C17orf114	ENSG00000262165.2	transcript	ENST00000635921.2	protein_coding		4441		chr17	TogoVar
C17orf58_chr17_67986099_68001469	68000846	TTATATAT others(11): Show TTATATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01106.hp1 others(11): Show HG01069.hp1 HG01071.hp2 HG01106.hp1 HG02451.hp2 HG02572.hp2 HG02615.hp1 HG02809.hp2 HG02886.hp2 HG02976.hp2 HG03041.hp2 HG03453.hp2 HG03540.hp2 HG03579.hp2 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0003c0003t0001 a0001c0001t0002 a0003c0003t0001	a0001c0001t0002g0153 a0001c0001t0002g0178 a0003c0003t0001g0013 others(3): Show a0001c0001t0002g0153 a0001c0001t0002g0178 a0003c0003t0001g0013 a0003c0003t0001g0023 a0003c0003t0001g0137 a0003c0003t0001g0140	14	412	0.0340	-18	c.-46 others(29): Show c.-4666_-4649delTATATATATATATATATA	C17orf58	ENSG00000186665.10	transcript	ENST00000580729.3	protein_coding		4378		chr17	TogoVar
C17orf58_chr17_67986099_68001469	68000883	TATATATA others(11): Show TATATATATATATATATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03704.hp1 HG03831.hp2 HG04228.hp2 HG03704.hp1 HG03831.hp2 HG04228.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0002 a0004c0005t0002 a0001c0001t0002 a0004c0005t0002	a0001c0001t0002g0051 a0001c0001t0002g0144 a0004c0005t0002g0133 a0001c0001t0002g0051 a0001c0001t0002g0144 a0004c0005t0002g0133	3	412	0.0073	-18	c.-47 others(29): Show c.-4703_-4686delGTATATATATATATATAT	C17orf58	ENSG00000186665.10	transcript	ENST00000580729.3	protein_coding		4415		chr17	TogoVar
C17orf80_chr17_73227433_73253959	73232934	CGCAGAAT others(11): Show CGCAGAATCAGAACAGCTG	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00323.hp2 others(193): Show HG00099.hp2 HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01891.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp2 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03491.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18612.hp1 NA18612.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18955.hp1 NA18959.hp1 NA18959.hp2 NA18964.hp1 NA18966.hp2 NA18967.hp2 NA18968.hp1 NA18972.hp2 NA18973.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18982.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18988.hp1 NA18990.hp2 NA18991.hp1 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19005.hp1 NA19006.hp2 NA19009.hp2 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19057.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp2 NA19075.hp2 NA19076.hp2 NA19082.hp1 NA19084.hp1 NA19084.hp2 NA19086.hp2 NA19087.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0009 a0010 a0011 a0012	a0001c0002 a0002c0001 a0002c0013 others(7): Show a0001c0002 a0002c0001 a0002c0013 a0002c0015 a0002c0018 a0003c0004 a0009c0010 a0010c0019 a0011c0017 a0012c0014	a0001c0002t0002 a0002c0001t0001 a0002c0001t0006 others(15): Show a0001c0002t0002 a0002c0001t0001 a0002c0001t0006 a0002c0001t0007 a0002c0001t0008 a0002c0001t0012 a0002c0001t0013 a0002c0001t0014 a0002c0001t0017 a0002c0001t0018 a0002c0013t0001 a0002c0015t0001 a0002c0018t0001 a0003c0004t0005 a0009c0010t0011 a0010c0019t0001 a0011c0017t0007 a0012c0014t0001	a0001c0002t0002g0055 a0001c0002t0002g0165 a0002c0001t0001g0002 others(83): Show a0001c0002t0002g0055 a0001c0002t0002g0165 a0002c0001t0001g0002 a0002c0001t0001g0003 a0002c0001t0001g0004 a0002c0001t0001g0005 a0002c0001t0001g0007 a0002c0001t0001g0014 a0002c0001t0001g0026 a0002c0001t0001g0027 a0002c0001t0001g0028 a0002c0001t0001g0029 a0002c0001t0001g0048 a0002c0001t0001g0049 a0002c0001t0001g0050 a0002c0001t0001g0051 a0002c0001t0001g0053 a0002c0001t0001g0054 a0002c0001t0001g0121 a0002c0001t0001g0126 a0002c0001t0001g0128 a0002c0001t0001g0129 a0002c0001t0001g0130 a0002c0001t0001g0131 a0002c0001t0001g0132 a0002c0001t0001g0133 a0002c0001t0001g0134 a0002c0001t0001g0135 a0002c0001t0001g0136 a0002c0001t0001g0137 a0002c0001t0001g0138 a0002c0001t0001g0139 a0002c0001t0001g0140 a0002c0001t0001g0141 a0002c0001t0001g0142 a0002c0001t0001g0143 a0002c0001t0001g0144 a0002c0001t0001g0145 a0002c0001t0001g0146 a0002c0001t0001g0147 a0002c0001t0001g0148 a0002c0001t0001g0149 a0002c0001t0001g0151 a0002c0001t0001g0152 a0002c0001t0001g0153 a0002c0001t0001g0154 a0002c0001t0001g0156 a0002c0001t0001g0157 a0002c0001t0001g0158 a0002c0001t0001g0161 a0002c0001t0001g0163 a0002c0001t0001g0164 a0002c0001t0006g0013 a0002c0001t0006g0047 a0002c0001t0006g0116 a0002c0001t0006g0117 a0002c0001t0006g0118 a0002c0001t0007g0017 a0002c0001t0007g0122 a0002c0001t0007g0123 a0002c0001t0007g0124 a0002c0001t0007g0125 a0002c0001t0008g0052 a0002c0001t0008g0119 a0002c0001t0008g0120 a0002c0001t0008g0159 a0002c0001t0008g0160 a0002c0001t0012g0004 a0002c0001t0013g0003 a0002c0001t0014g0005 a0002c0001t0017g0048 a0002c0001t0018g0013 a0002c0013t0001g0162 a0002c0015t0001g0014 a0002c0018t0001g0002 a0003c0004t0005g0012 a0003c0004t0005g0025 a0003c0004t0005g0045 a0003c0004t0005g0113 a0003c0004t0005g0114 a0003c0004t0005g0115 a0009c0010t0011g0150 a0009c0010t0011g0155 a0010c0019t0001g0127 a0011c0017t0007g0166 a0012c0014t0001g0004	196	384	0.5104	-18	c.-11 others(35): Show c.-113-268_-113-251delGGCAGAATCAGAACAGCT	C17orf80	ENSG00000141219.16	transcript	ENST00000535032.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr17	TogoVar
C18orf21_chr18_35967679_35984278	35983640	AAATCATC others(11): Show AAATCATCTTCAACATACC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	400	0.0025	-18	c.46 others(29): Show c.4635_*4652delAATCATCTTCAACATACC	C18orf21	ENSG00000141428.17	transcript	ENST00000592875.6	protein_coding		4363		chr18	TogoVar
C18orf63_chr18_74310839_74364189	74361724	AATATAAT others(11): Show AATATAATTATATATTTAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0125 a0003c0004t0003g0125	1	372	0.0027	-18	c.52 others(29): Show c.5278_*5295delATATAATTATATATTTAT	C18orf63	ENSG00000206043.7	transcript	ENST00000579455.2	protein_coding		2536		chr18	TogoVar
C19orf12_chr19_29693937_29720261	29711322	GAGCCACT others(11): Show GAGCCACTACGTCCAGCAC	G G	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0071 a0001c0002t0001g0071	1	418	0.0024	-18	c.-10 others(35): Show c.-10-2917_-10-2900delGTGCTGGACGTAGTGGCT	C19orf12	ENSG00000131943.20	transcript	ENST00000323670.14	protein_coding	1/2			chr19	TogoVar
C19orf18_chr19_57953437_57979534	57973145	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01258.hp2 HG01256.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	2	408	0.0049	-18	c.227 others(33): Show c.227-659_227-642delTTTTTTTTTTTTTTTTTT	C19orf18	ENSG00000177025.3	transcript	ENST00000314391.3	protein_coding	2/5			chr19	TogoVar
C19orf38_chr19_10843415_10874790	10859346	GTGTATAT others(11): Show GTGTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0177 a0001c0001t0002g0177	1	384	0.0026	-18	c.462 others(33): Show c.462-567_462-550delGTATATATATATATATAT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf38_chr19_10843415_10874790	10859368	ATATATAT others(11): Show ATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	NA18943.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	384	0.0026	-18	c.462 others(33): Show c.462-545_462-528delATATATATATATATATTT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf38_chr19_10843415_10874790	10859370	ATATATAT others(11): Show ATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18956.hp1 NA18981.hp2 others(1): Show NA18945.hp1 NA18956.hp1 NA18981.hp2 NA18982.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0006 a0001c0001t0001g0027 a0001c0001t0001g0084 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0027 a0001c0001t0001g0084 a0003c0003t0001g0006	4	384	0.0104	-18	c.462 others(33): Show c.462-543_462-526delATATATATATATATTTTT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf38_chr19_10843415_10874790	10867641	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02970.hp2 HG02965.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0151 a0001c0001t0001g0152	2	384	0.0052	-18	c.544 others(35): Show c.544-1565_544-1548delTTTTTTTTTTTTTTTTTT	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf38_chr19_10843415_10874790	10871589	AGCGGCGG others(11): Show AGCGGCGGCGGCGGCGGCG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG01074.hp1 HG01168.hp2 others(4): Show HG00741.hp1 HG01074.hp1 HG01168.hp2 HG01255.hp1 HG01361.hp1 HG02155.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0015 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0056 a0001c0001t0001g0204	7	384	0.0182	-18	c.22 others(29): Show c.2223_*2240delGCGGCGGCGGCGGCGGCG	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding		1800		chr19	TogoVar
C19orf38_chr19_10843415_10874790	10871622	GGCGGCGG others(11): Show GGCGGCGGCGGCGGCGGCA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp2 HG02895.hp1 HG02897.hp2 others(6): Show HG02717.hp2 HG02895.hp1 HG02897.hp2 NA18946.hp1 NA18985.hp2 NA19010.hp2 NA19079.hp1 NA19080.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0094 others(6): Show a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0098 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0118 a0001c0001t0001g0119	9	384	0.0234	-18	c.22 others(29): Show c.2256_*2273delGCGGCGGCGGCGGCGGCA	C19orf38	ENSG00000214212.9	transcript	ENST00000397820.5	protein_coding		1833		chr19	TogoVar
C19orf44_chr19_16491394_16526352	16522777	GACTCGAG others(11): Show GACTCGAGCCTCATAGCCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0131	1	330	0.0030	-18	c.27 others(29): Show c.2725_*2742delACTCGAGCCTCATAGCCT	C19orf44	ENSG00000105072.9	transcript	ENST00000221671.8	protein_coding		1426		chr19	TogoVar
C19orf81_chr19_50644445_50664306	50653682	GCACACAC others(11): Show GCACACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	416	0.0024	-18	c.68- others(33): Show c.68-2326_68-2309delACACACACACACACACAC	C19orf81	ENSG00000235034.7	transcript	ENST00000425202.6	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
C19orf81_chr19_50644445_50664306	50657574	TAATACGA others(11): Show TAATACGAATATAAAAGGA	T T	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0242	1	416	0.0024	-18	c.262 others(33): Show c.262-412_262-395delTACGAATATAAAAGGAAA	C19orf81	ENSG00000235034.7	transcript	ENST00000425202.6	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
C1QL1_chr17_44954693_44973303	44954750	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	408	0.0025	-18	c.54 others(29): Show c.5420_*5437delAAAAAAAAAAAAAAAAAA	C1QL1	ENSG00000131094.4	transcript	ENST00000253407.4	protein_coding		4942		chr17	TogoVar
C1QTNF1_chr17_79019169_79054788	79030467	CTTTCTTT others(11): Show CTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG02004.hp1 HG02572.hp2 others(6): Show HG01168.hp1 HG02004.hp1 HG02572.hp2 HG02683.hp2 HG02723.hp1 HG03579.hp1 NA18946.hp2 NA19240.hp1 NA20300.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0001c0007 a0007c0014	a0001c0001t0010 a0001c0003t0001 a0001c0003t0007 others(4): Show a0001c0001t0010 a0001c0003t0001 a0001c0003t0007 a0001c0003t0033 a0001c0005t0005 a0001c0007t0001 a0007c0014t0001	a0001c0001t0010g0071 a0001c0003t0001g0208 a0001c0003t0007g0099 others(6): Show a0001c0001t0010g0071 a0001c0003t0001g0208 a0001c0003t0007g0099 a0001c0003t0033g0100 a0001c0005t0005g0187 a0001c0005t0005g0188 a0001c0005t0005g0192 a0001c0007t0001g0097 a0007c0014t0001g0098	9	392	0.0230	-18	c.-15 others(35): Show c.-15+5993_-15+6010delTTCTTTCTTTCTTTCTTT	C1QTNF1	ENSG00000173918.15	transcript	ENST00000579760.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
C1QTNF4_chr11_47584667_47599411	47588707	AGTGTGTG others(11): Show AGTGTGTGTGTGAGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp2 HG02622.hp1 HG02630.hp2 others(7): Show HG02486.hp2 HG02622.hp1 HG02630.hp2 HG02723.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp2 HG03209.hp2 NA18522.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0030 a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0030	10	408	0.0245	-18	c.10 others(29): Show c.1096_*1113delACACACTCACACACACAC	C1QTNF4	ENSG00000172247.4	transcript	ENST00000302514.4	protein_coding		959		chr11	TogoVar
C1QTNF7_chr4_15423033_15451167	15450534	ACACCCAC others(11): Show ACACCCACACACAGAAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02015.hp2 NA19240.hp2 HG02015.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0008 a0001c0001t0004g0057 a0001c0001t0004g0008 a0001c0001t0004g0057	2	444	0.0045	-18	c.77 others(29): Show c.7736_*7753delCACCCACACACAGAAAAG	C1QTNF7	ENSG00000163145.13	transcript	ENST00000444304.3	protein_coding		4368		chr4	TogoVar
C1orf100_chr1_244347635_244394663	244360545	CACACACA others(11): Show CACACACACACACATGCAT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02622.hp2 HG02895.hp1 others(4): Show HG02145.hp2 HG02622.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 NA19043.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0125 a0001c0001t0001g0130 a0001c0001t0001g0134 others(4): Show a0001c0001t0001g0125 a0001c0001t0001g0130 a0001c0001t0001g0134 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0131 a0001c0001t0002g0132	7	452	0.0155	-18	c.-13 others(35): Show c.-13-4142_-13-4125delACACACACACACATGCAT	C1orf100	ENSG00000173728.11	transcript	ENST00000308105.5	protein_coding	1/4			chr1	TogoVar
C1orf100_chr1_244347635_244394663	244360546	ACACACAC others(11): Show ACACACACACACATGCATG	A A	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0188 a0001c0001t0001g0188	1	452	0.0022	-18	c.-13 others(35): Show c.-13-4139_-13-4122delCACACACACATGCATGCA	C1orf100	ENSG00000173728.11	transcript	ENST00000308105.5	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf100_chr1_244347635_244394663	244360549	CACACACA others(11): Show CACACACACATGCATGCAT	C C	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG04204.hp2 HG04228.hp2 HG03704.hp2 HG04204.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0370 a0001c0001t0003g0371 a0001c0001t0003g0372 a0001c0001t0002g0370 a0001c0001t0003g0371 a0001c0001t0003g0372	3	452	0.0066	-18	c.-13 others(35): Show c.-13-4138_-13-4121delACACACACATGCATGCAT	C1orf100	ENSG00000173728.11	transcript	ENST00000308105.5	protein_coding	1/4			chr1	TogoVar
C1orf105_chr1_172415685_172473829	172441352	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02809.hp2 NA18906.hp2 HG02630.hp2 HG02809.hp2 NA18906.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0007 a0001c0001 a0002c0002 a0004c0007	a0001c0001t0001 a0002c0002t0004 a0004c0007t0004 a0001c0001t0001 a0002c0002t0004 a0004c0007t0004	a0001c0001t0001g0090 a0002c0002t0004g0089 a0004c0007t0004g0086 a0001c0001t0001g0090 a0002c0002t0004g0089 a0004c0007t0004g0086	3	320	0.0094	-18	c.22- others(33): Show c.22-3698_22-3681delACACACACACACACACAC	C1orf105	ENSG00000180999.11	transcript	ENST00000367727.9	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf105_chr1_172415685_172473829	172466573	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00741.hp1 HG01081.hp2 others(14): Show HG00099.hp1 HG00741.hp1 HG01081.hp2 HG01123.hp2 HG01168.hp1 HG01346.hp2 HG02109.hp2 HG02809.hp2 HG02818.hp1 HG02976.hp1 HG03209.hp2 HG03486.hp2 HG03491.hp1 HG03654.hp2 HG03710.hp1 HG06807.hp1 NA20129.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0002c0002t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0004 a0003c0003t0002 a0003c0003t0006	a0001c0001t0001g0087 a0001c0001t0002g0200 a0002c0002t0004g0089 others(11): Show a0001c0001t0001g0087 a0001c0001t0002g0200 a0002c0002t0004g0089 a0003c0003t0002g0009 a0003c0003t0002g0094 a0003c0003t0002g0108 a0003c0003t0002g0109 a0003c0003t0002g0141 a0003c0003t0002g0144 a0003c0003t0002g0145 a0003c0003t0002g0188 a0003c0003t0002g0189 a0003c0003t0002g0190 a0003c0003t0006g0146	17	320	0.0531	-18	c.406 others(35): Show c.406+1236_406+1253delCACACACACACACACACA	C1orf105	ENSG00000180999.11	transcript	ENST00000367727.9	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf109_chr1_37676570_37695529	37687059	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01928.hp2 HG01952.hp1 others(2): Show HG01074.hp1 HG01928.hp2 HG01952.hp1 HG01981.hp1 HG01993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0180 a0001c0001t0004g0043 a0001c0001t0004g0179 a0001c0001t0001g0180 a0001c0001t0004g0043 a0001c0001t0004g0179	5	432	0.0116	-18	c.276 others(33): Show c.276-625_276-608delACACACACACACACACAC	C1orf109	ENSG00000116922.15	transcript	ENST00000486637.2	protein_coding	2/4			chr1	TogoVar
C1orf109_chr1_37676570_37695529	37693901	GCTGAGGC others(11): Show GCTGAGGCGGGCAGATGAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0030 a0001c0001t0003g0030	1	432	0.0023	-18	c.-39 others(29): Show c.-3921_-3904delGTCATCTGCCCGCCTCAG	C1orf109	ENSG00000116922.15	transcript	ENST00000486637.2	protein_coding		3373		chr1	TogoVar
C1orf127_chr1_10941475_10987076	10968139	ACAAAGTG others(11): Show ACAAAGTGAGACTCCGTCT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03453.hp2 HG01243.hp2 HG03453.hp2	a0001 a0014 a0001 a0014	a0001c0011 a0014c0018 a0001c0011 a0014c0018	a0001c0011t0001 a0014c0018t0004 a0001c0011t0001 a0014c0018t0004	a0001c0011t0001g0048 a0014c0018t0004g0336 a0001c0011t0001g0048 a0014c0018t0004g0336	2	392	0.0051	-18	c.248 others(35): Show c.248-1675_248-1658delAGACGGAGTCTCACTTTG	C1orf127	ENSG00000175262.15	transcript	ENST00000377004.9	protein_coding	3/12			chr1	TogoVar
C1orf127_chr1_10941475_10987076	10972420	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03195.hp1 HG03195.hp2 others(3): Show HG02630.hp1 HG03195.hp1 HG03195.hp2 HG03486.hp2 NA19240.hp1 NA19240.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0003 a0005c0008 a0001c0001 a0001c0003 a0005c0008	a0001c0001t0001 a0001c0003t0001 a0005c0008t0004 a0001c0001t0001 a0001c0003t0001 a0005c0008t0004	a0001c0001t0001g0334 a0001c0003t0001g0371 a0005c0008t0004g0026 others(3): Show a0001c0001t0001g0334 a0001c0003t0001g0371 a0005c0008t0004g0026 a0005c0008t0004g0332 a0005c0008t0004g0333 a0005c0008t0004g0350	6	392	0.0153	-18	c.128 others(35): Show c.128-2349_128-2332delGTGTGTGTGTGTGTGTGT	C1orf127	ENSG00000175262.15	transcript	ENST00000377004.9	protein_coding	2/12			chr1	TogoVar
C1orf127_chr1_10941475_10987076	10983045	TAAAAAAA others(11): Show TAAAAAAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18964.hp1 NA19064.hp1 NA18964.hp1 NA19064.hp1	a0002 a0002	a0002c0009 a0002c0009	a0002c0009t0001 a0002c0009t0001	a0002c0009t0001g0230 a0002c0009t0001g0231 a0002c0009t0001g0230 a0002c0009t0001g0231	2	392	0.0051	-18	c.-10 others(29): Show c.-1026_-1009delTTTTTTTTTTTTTTTTTT	C1orf127	ENSG00000175262.15	transcript	ENST00000377004.9	protein_coding		970		chr1	TogoVar
C1orf146_chr1_92212915_92250813	92241187	CTTATTAT others(11): Show CTTATTATTATTATTATTA	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02486.hp2 HG03225.hp2 HG02145.hp1 HG02486.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0070 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0070	3	280	0.0107	-18	c.67- others(32): Show c.67-1001_67-984delATTATTATTATTATTATT	C1orf146	ENSG00000203910.9	transcript	ENST00000370375.8	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
C1orf167_chr1_11757193_11794585	11757893	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG02615.hp1 NA19030.hp1 HG01243.hp1 HG02615.hp1 NA19030.hp1	a0005 a0052 a0005 a0052	a0005c0007 a0005c0017 a0052c0032 a0005c0007 a0005c0017 a0052c0032	a0005c0007t0001 a0005c0017t0001 a0052c0032t0001 a0005c0007t0001 a0005c0017t0001 a0052c0032t0001	a0005c0007t0001g0038 a0005c0017t0001g0043 a0052c0032t0001g0096 a0005c0007t0001g0038 a0005c0017t0001g0043 a0052c0032t0001g0096	3	350	0.0086	-18	c.-44 others(29): Show c.-4482_-4465delGTGTGTGTGTGTGTGTGT	C1orf167	ENSG00000215910.8	transcript	ENST00000688073.1	protein_coding		4299		chr1	TogoVar
C1orf198_chr1_230832119_230873521	230872064	GGTTTTTT others(11): Show GGTTTTTTTTTTTTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(56): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00609.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01167.hp2 HG01255.hp1 HG01261.hp2 HG01891.hp2 HG01943.hp2 HG01952.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp2 HG02165.hp2 HG02300.hp1 HG02683.hp1 HG02735.hp2 HG02738.hp1 HG03688.hp2 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG04228.hp1 HG04228.hp2 NA18943.hp1 NA18945.hp1 NA18952.hp2 NA18956.hp2 NA18957.hp2 NA18962.hp1 NA18965.hp1 NA18972.hp2 NA18975.hp1 NA18981.hp1 NA18985.hp1 NA18986.hp2 NA18990.hp2 NA18993.hp1 NA18994.hp2 NA19002.hp1 NA19003.hp2 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19043.hp1 NA19054.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp2 NA19062.hp1 NA19070.hp1 NA19079.hp2 NA19091.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0018	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(25): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0023 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0162 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0173 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0193 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0002g0014 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0179 a0001c0001t0003g0181 a0001c0001t0008g0180 a0001c0001t0008g0184 a0001c0001t0008g0192 a0001c0001t0018g0186	59	428	0.1379	-18	c.-35 others(29): Show c.-3570_-3553delAAAAAAAAAAAAAAAAAC	C1orf198	ENSG00000119280.17	transcript	ENST00000366663.10	protein_coding		3544		chr1	TogoVar

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