Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHRNA4_chr20_63338223_63366349	63351166	CGTCCACG others(11): Show CGTCCACGCCCACATCCAT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 NA19043.hp2 HG01074.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0035 a0001c0004t0002 a0001c0001t0035 a0001c0004t0002	a0001c0001t0035g0122 a0001c0004t0002g0049 a0001c0001t0035g0122 a0001c0004t0002g0049	2	166	0.0120	-18	c.384 others(33): Show c.384-157_384-140delATGGATGTGGGCGTGGAC	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	4/5			chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63353601	TAGGGGGC others(11): Show TAGGGGGCTGTGGTCCTAG	T T	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0132 a0001c0002t0001g0132	1	166	0.0060	-18	c.383 others(35): Show c.383+2356_383+2373delCTAGGACCACAGCCCCCT	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	4/5			chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63355942	CTGTAGAG others(11): Show CTGTAGAGGACTCACTTGT	C C	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0065 a0001c0004t0002g0065	1	166	0.0060	-18	c.383 others(31): Show c.383+15_383+32delACAAGTGAGTCCTCTACA	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	4/5			chr20	TogoVar
CHRNA7_chr15_32025515_32178018	32070669	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG06807.hp1 NA19002.hp1 HG00639.hp2 HG06807.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0029 a0001c0001t0001 a0001c0001t0029	a0001c0001t0001g0093 a0001c0001t0001g0105 a0001c0001t0029g0205 a0001c0001t0001g0093 a0001c0001t0001g0105 a0001c0001t0029g0205	3	11	0.2727	-18	c.196 others(37): Show c.196-30616_196-30599delTTTTTTTTTTTTTTTTTT	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHRNB1_chr17_7440061_7462710	7446309	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTC	G G	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02451.hp2 HG02886.hp2 others(3): Show HG02257.hp2 HG02451.hp2 HG02886.hp2 HG02965.hp2 HG03453.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0194 a0001c0001t0001g0264 others(3): Show a0001c0001t0001g0045 a0001c0001t0001g0194 a0001c0001t0001g0264 a0001c0001t0001g0266 a0001c0001t0001g0269 a0001c0001t0001g0271	6	366	0.0164	-18	c.243 others(33): Show c.243+214_243+231delCTGTGTGTGTGTGTGTGT	CHRNB1	ENSG00000170175.11	transcript	ENST00000306071.7	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
CHRNB1_chr17_7440061_7462710	7448074	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0093	1	146	0.0068	-18	c.610 others(33): Show c.610+435_610+452delAAAAAAAAAAAAAAAAAA	CHRNB1	ENSG00000170175.11	transcript	ENST00000306071.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
CHRNB4_chr15_78619111_78646210	78626341	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0119 a0001c0001t0007g0119	1	138	0.0072	-18	c.133 others(37): Show c.1339-1068_1339-1051delACACACACACACACACAC	CHRNB4	ENSG00000117971.12	transcript	ENST00000261751.8	protein_coding	5/5			chr15	TogoVar
CHST11_chr12_104451948_104767014	104544136	AAAAAAGA others(11): Show AAAAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0013 a0001c0001t0031g0013	1	238	0.0042	-18	c.119 others(37): Show c.119-57766_119-57749delAAGAAAGAAAGAAAGAAA	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104544144	AAGAAAGA others(11): Show AAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01256.hp2 HG02572.hp1 others(4): Show HG00438.hp2 HG01256.hp2 HG02572.hp1 HG03710.hp2 HG03831.hp1 NA20752.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0028 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0028 a0001c0001t0046 a0002c0002t0002	a0001c0001t0001g0046 a0001c0001t0001g0080 a0001c0001t0003g0009 others(4): Show a0001c0001t0001g0046 a0001c0001t0001g0080 a0001c0001t0003g0009 a0001c0001t0003g0083 a0001c0001t0028g0082 a0001c0001t0046g0081 a0002c0002t0002g0119	7	238	0.0294	-18	c.119 others(37): Show c.119-57760_119-57743delGAAAGAAAGAAAGAAAGA	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104562899	GTTAAAGG others(11): Show GTTAAAGGGGCATTCTTGA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00544.hp2 HG00558.hp2 others(9): Show HG00438.hp1 HG00544.hp2 HG00558.hp2 HG02132.hp2 HG02559.hp2 NA18942.hp1 NA18963.hp2 NA18979.hp1 NA19057.hp1 NA19060.hp1 NA19068.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0030 a0001c0001t0049 a0001c0001t0056 a0001c0001t0071	a0001c0001t0001g0042 a0001c0001t0001g0226 a0001c0001t0003g0237 others(9): Show a0001c0001t0001g0042 a0001c0001t0001g0226 a0001c0001t0003g0237 a0001c0001t0004g0088 a0001c0001t0006g0051 a0001c0001t0006g0236 a0001c0001t0009g0043 a0001c0001t0010g0125 a0001c0001t0030g0112 a0001c0001t0049g0168 a0001c0001t0056g0202 a0001c0001t0071g0174	12	238	0.0504	-18	c.119 others(37): Show c.119-39004_119-38987delAAAGGGGCATTCTTGATT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST11_chr12_104451948_104767014	104610043	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02723.hp1 NA20300.hp1 HG02257.hp2 HG02723.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0059 a0001c0001t0018 a0001c0001t0059	a0001c0001t0018g0004 a0001c0001t0018g0105 a0001c0001t0059g0152 a0001c0001t0018g0004 a0001c0001t0018g0105 a0001c0001t0059g0152	3	12	0.2500	-18	c.204 others(35): Show c.204+8088_204+8105delGTGTGTGTGTGTGTGTGT	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST13_chr3_126519155_126548291	126529130	ACCCTGCA others(11): Show ACCCTGCACAGGGCGCGAG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00323.hp2 others(46): Show HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00639.hp2 HG01099.hp1 HG01167.hp2 HG01169.hp2 HG01261.hp1 HG01516.hp1 HG01884.hp2 HG01928.hp1 HG01975.hp1 HG01981.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02083.hp1 HG02109.hp1 HG02132.hp1 HG02135.hp1 HG02572.hp1 HG02886.hp2 HG02976.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03516.hp2 HG03540.hp1 HG03654.hp1 HG03688.hp2 HG04228.hp2 NA18522.hp2 NA18906.hp2 NA18947.hp2 NA18957.hp2 NA18968.hp1 NA18969.hp2 NA18992.hp1 NA18999.hp2 NA19005.hp2 NA19007.hp1 NA19043.hp1 NA19063.hp2 NA19074.hp2 NA19079.hp2 NA19083.hp1 NA19091.hp2 NA20129.hp2	a0002 a0003 a0004 others(2): Show a0002 a0003 a0004 a0005 a0007	a0002c0002 a0003c0007 a0004c0003 others(2): Show a0002c0002 a0003c0007 a0004c0003 a0005c0006 a0007c0009	a0002c0002t0001 a0003c0007t0001 a0003c0007t0006 others(3): Show a0002c0002t0001 a0003c0007t0001 a0003c0007t0006 a0004c0003t0002 a0005c0006t0001 a0007c0009t0002	a0002c0002t0001g0096 a0003c0007t0001g0041 a0003c0007t0001g0087 others(17): Show a0002c0002t0001g0096 a0003c0007t0001g0041 a0003c0007t0001g0087 a0003c0007t0001g0092 a0003c0007t0001g0101 a0003c0007t0001g0108 a0003c0007t0001g0109 a0003c0007t0006g0107 a0004c0003t0002g0003 a0004c0003t0002g0033 a0004c0003t0002g0034 a0004c0003t0002g0086 a0004c0003t0002g0093 a0004c0003t0002g0099 a0004c0003t0002g0100 a0004c0003t0002g0126 a0005c0006t0001g0006 a0007c0009t0002g0003 a0007c0009t0002g0097 a0007c0009t0002g0098	49	362	0.1354	-18	c.97+ others(33): Show c.97+4708_97+4725delACAGGGCGCGAGCCCTGC	CHST13	ENSG00000180767.11	transcript	ENST00000319340.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr3	TogoVar
CHST13_chr3_126519155_126548291	126529142	GCGCGAGC others(11): Show GCGCGAGCCCTGCTTTGGC	G G	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02818.hp2 HG02895.hp1 others(5): Show HG02630.hp1 HG02818.hp2 HG02895.hp1 HG02970.hp2 HG03579.hp2 NA18906.hp1 NA19030.hp1 NA20300.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0001 a0006c0008t0001 a0001c0001t0001 a0006c0008t0001	a0001c0001t0001g0078 a0001c0001t0001g0094 a0006c0008t0001g0017 others(1): Show a0001c0001t0001g0078 a0001c0001t0001g0094 a0006c0008t0001g0017 a0006c0008t0001g0032	8	362	0.0221	-18	c.97+ others(33): Show c.97+4714_97+4731delCGCGAGCCCTGCTTTGGC	CHST13	ENSG00000180767.11	transcript	ENST00000319340.7	protein_coding	1/2			chr3	TogoVar
CHST15_chr10_124002668_124098598	124005126	ACCCCTCG others(11): Show ACCCCTCGTGTCACCCTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0030 a0001c0019t0030	a0001c0019t0030g0218 a0001c0019t0030g0218	1	390	0.0026	-18	c.50 others(29): Show c.5005_*5022delACAGGGTGACACGAGGGG	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding		2541		chr10	TogoVar
CHST15_chr10_124002668_124098598	124043887	AGGAACAG others(11): Show AGGAACAGCACAGAGCAGG	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02559.hp1 HG02572.hp1 others(11): Show HG02257.hp2 HG02559.hp1 HG02572.hp1 HG02647.hp2 HG02886.hp2 HG02970.hp2 HG03139.hp1 HG03195.hp1 HG03453.hp1 HG03471.hp2 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0018 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0018 a0001c0001t0022 a0001c0001t0024 a0001c0007t0002 a0001c0007t0004 a0001c0007t0010	a0001c0001t0001g0007 a0001c0001t0001g0168 a0001c0001t0001g0169 others(10): Show a0001c0001t0001g0007 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0003g0167 a0001c0001t0018g0015 a0001c0001t0022g0166 a0001c0001t0024g0105 a0001c0007t0002g0017 a0001c0007t0002g0217 a0001c0007t0004g0293 a0001c0007t0010g0289	14	389	0.0360	-18	c.886 others(33): Show c.886+675_886+692delCCTGCTCTGTGCTGTTCC	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding	3/7			chr10	TogoVar
CHST15_chr10_124002668_124098598	124044097	GGGAACGG others(11): Show GGGAACGGCACAGAGCAGA	G G	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0352 a0001c0002t0001g0352	1	371	0.0027	-18	c.886 others(33): Show c.886+465_886+482delTCTGCTCTGTGCCGTTCC	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding	3/7			chr10	TogoVar
CHST15_chr10_124002668_124098598	124044119	ACGGCACA others(11): Show ACGGCACAGAGCAGAGGAC	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00544.hp2 HG00597.hp2 others(45): Show HG00408.hp2 HG00544.hp2 HG00597.hp2 HG00738.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp2 HG01361.hp2 HG01891.hp1 HG01993.hp2 HG02004.hp2 HG02145.hp1 HG02293.hp1 HG02300.hp1 HG02922.hp2 HG03041.hp1 HG03453.hp2 NA18522.hp2 NA18941.hp2 NA18945.hp2 NA18946.hp1 NA18957.hp2 NA18961.hp1 NA18962.hp1 NA18964.hp2 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18984.hp1 NA18985.hp2 NA18989.hp1 NA18992.hp2 NA18995.hp1 NA19002.hp1 NA19004.hp1 NA19011.hp1 NA19065.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp2 NA19082.hp1 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19090.hp2 NA19091.hp1	a0001 a0001	a0001c0002 a0001c0006 a0001c0008 a0001c0002 a0001c0006 a0001c0008	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(5): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0011 a0001c0006t0007 a0001c0008t0001 a0001c0008t0008	a0001c0002t0001g0087 a0001c0002t0001g0093 a0001c0002t0001g0094 others(43): Show a0001c0002t0001g0087 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0159 a0001c0002t0001g0322 a0001c0002t0001g0329 a0001c0002t0001g0330 a0001c0002t0001g0337 a0001c0002t0001g0338 a0001c0002t0001g0354 a0001c0002t0001g0355 a0001c0002t0001g0356 a0001c0002t0001g0362 a0001c0002t0001g0364 a0001c0002t0001g0365 a0001c0002t0002g0324 a0001c0002t0002g0332 a0001c0002t0002g0339 a0001c0002t0002g0340 a0001c0002t0002g0346 a0001c0002t0002g0347 a0001c0002t0002g0350 a0001c0002t0002g0357 a0001c0002t0002g0358 a0001c0002t0002g0363 a0001c0002t0003g0323 a0001c0002t0003g0345 a0001c0002t0003g0351 a0001c0002t0003g0353 a0001c0002t0004g0013 a0001c0002t0004g0014 a0001c0002t0004g0326 a0001c0002t0004g0331 a0001c0002t0004g0333 a0001c0002t0004g0334 a0001c0002t0011g0325 a0001c0002t0011g0327 a0001c0002t0011g0328 a0001c0002t0011g0342 a0001c0006t0007g0343 a0001c0006t0007g0344 a0001c0006t0007g0348 a0001c0006t0007g0349 a0001c0008t0001g0223 a0001c0008t0008g0224 a0001c0008t0008g0225	48	388	0.1237	-18	c.886 others(33): Show c.886+443_886+460delGTCCTCTGCTCTGTGCCG	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding	3/7			chr10	TogoVar
CHST15_chr10_124002668_124098598	124044154	ACGGCACA others(11): Show ACGGCACAGAGCTTGGGAG	A A	intron_variant intron_variant	MODIFIER	HG01975.hp2 HG02148.hp2 HG01975.hp2 HG02148.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0335 a0001c0001t0003g0336 a0001c0001t0003g0335 a0001c0001t0003g0336	2	385	0.0052	-18	c.886 others(33): Show c.886+408_886+425delCTCCCAAGCTCTGTGCCG	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding	3/7			chr10	TogoVar
CHST15_chr10_124002668_124098598	124081339	TGCATGCA others(11): Show TGCATGCACACACATGCAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(270): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp2 HG02056.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18952.hp2 NA18955.hp1 NA18957.hp2 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18985.hp1 NA18985.hp2 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18999.hp2 NA19002.hp1 NA19004.hp1 NA19004.hp2 NA19007.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19078.hp1 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0003 a0005 others(2): Show a0001 a0003 a0005 a0006 a0007	a0001c0001 a0001c0002 a0001c0003 others(14): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0008 a0001c0012 a0001c0013 a0001c0015 a0001c0016 a0001c0018 a0001c0019 a0003c0010 a0005c0014 a0006c0020 a0007c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(51): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0001t0028 a0001c0001t0029 a0001c0001t0032 a0001c0001t0036 a0001c0001t0037 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0011 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0004 a0001c0004t0007 a0001c0004t0014 a0001c0004t0015 a0001c0006t0007 a0001c0007t0002 a0001c0007t0004 a0001c0007t0010 a0001c0008t0001 a0001c0008t0008 a0001c0012t0007 a0001c0013t0015 a0001c0015t0001 a0001c0016t0001 a0001c0018t0015 a0001c0019t0030 a0003c0010t0001 a0003c0010t0003 a0003c0010t0006 a0005c0014t0010 a0006c0020t0002 a0007c0017t0001	a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 others(257): Show a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0048 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0089 a0001c0001t0001g0096 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0238 a0001c0001t0001g0244 a0001c0001t0001g0253 a0001c0001t0001g0264 a0001c0001t0001g0269 a0001c0001t0001g0272 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0367 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0039 a0001c0001t0002g0041 a0001c0001t0002g0044 a0001c0001t0002g0046 a0001c0001t0002g0055 a0001c0001t0002g0060 a0001c0001t0002g0069 a0001c0001t0002g0074 a0001c0001t0002g0079 a0001c0001t0002g0164 a0001c0001t0002g0182 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0204 a0001c0001t0002g0221 a0001c0001t0002g0227 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0254 a0001c0001t0002g0257 a0001c0001t0002g0276 a0001c0001t0002g0283 a0001c0001t0002g0341 a0001c0001t0003g0002 a0001c0001t0003g0009 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0022 a0001c0001t0003g0038 a0001c0001t0003g0059 a0001c0001t0003g0061 a0001c0001t0003g0066 a0001c0001t0003g0078 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0167 a0001c0001t0003g0193 a0001c0001t0003g0220 a0001c0001t0003g0229 a0001c0001t0003g0231 a0001c0001t0003g0245 a0001c0001t0003g0256 a0001c0001t0003g0266 a0001c0001t0003g0267 a0001c0001t0003g0271 a0001c0001t0003g0274 a0001c0001t0003g0275 a0001c0001t0003g0279 a0001c0001t0003g0280 a0001c0001t0003g0290 a0001c0001t0003g0335 a0001c0001t0003g0336 a0001c0001t0004g0035 a0001c0001t0004g0037 a0001c0001t0004g0062 a0001c0001t0004g0191 a0001c0001t0004g0207 a0001c0001t0004g0212 a0001c0001t0004g0232 a0001c0001t0004g0235 a0001c0001t0004g0236 a0001c0001t0004g0240 a0001c0001t0004g0243 a0001c0001t0004g0258 a0001c0001t0004g0270 a0001c0001t0004g0292 a0001c0001t0004g0315 a0001c0001t0005g0036 a0001c0001t0005g0050 a0001c0001t0005g0068 a0001c0001t0005g0255 a0001c0001t0006g0052 a0001c0001t0006g0201 a0001c0001t0006g0239 a0001c0001t0006g0259 a0001c0001t0006g0263 a0001c0001t0006g0268 a0001c0001t0006g0273 a0001c0001t0008g0210 a0001c0001t0008g0226 a0001c0001t0008g0234 a0001c0001t0008g0249 a0001c0001t0008g0251 a0001c0001t0009g0011 a0001c0001t0009g0012 a0001c0001t0010g0206 a0001c0001t0010g0222 a0001c0001t0012g0049 a0001c0001t0013g0205 a0001c0001t0013g0213 a0001c0001t0013g0288 a0001c0001t0016g0020 a0001c0001t0016g0031 a0001c0001t0018g0015 a0001c0001t0019g0183 a0001c0001t0020g0230 a0001c0001t0021g0360 a0001c0001t0022g0166 a0001c0001t0025g0161 a0001c0001t0026g0260 a0001c0001t0028g0237 a0001c0001t0029g0033 a0001c0001t0032g0165 a0001c0001t0036g0372 a0001c0001t0037g0373 a0001c0002t0001g0087 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0322 a0001c0002t0001g0329 a0001c0002t0001g0330 a0001c0002t0001g0337 a0001c0002t0001g0338 a0001c0002t0001g0352 a0001c0002t0001g0354 a0001c0002t0001g0355 a0001c0002t0001g0356 a0001c0002t0001g0359 a0001c0002t0001g0362 a0001c0002t0001g0364 a0001c0002t0001g0365 a0001c0002t0002g0324 a0001c0002t0002g0332 a0001c0002t0002g0339 a0001c0002t0002g0340 a0001c0002t0002g0346 a0001c0002t0002g0347 a0001c0002t0002g0350 a0001c0002t0002g0357 a0001c0002t0002g0358 a0001c0002t0002g0363 a0001c0002t0003g0323 a0001c0002t0003g0345 a0001c0002t0003g0351 a0001c0002t0003g0353 a0001c0002t0004g0013 a0001c0002t0004g0014 a0001c0002t0004g0326 a0001c0002t0004g0331 a0001c0002t0004g0333 a0001c0002t0004g0334 a0001c0002t0011g0325 a0001c0002t0011g0327 a0001c0002t0011g0328 a0001c0002t0011g0342 a0001c0003t0001g0180 a0001c0003t0001g0181 a0001c0003t0001g0214 a0001c0003t0001g0247 a0001c0003t0001g0248 a0001c0003t0001g0262 a0001c0003t0001g0265 a0001c0003t0001g0281 a0001c0003t0001g0316 a0001c0003t0001g0317 a0001c0003t0001g0319 a0001c0003t0001g0320 a0001c0003t0001g0321 a0001c0003t0002g0047 a0001c0003t0002g0209 a0001c0003t0003g0057 a0001c0003t0004g0261 a0001c0003t0004g0282 a0001c0004t0007g0043 a0001c0004t0014g0250 a0001c0004t0014g0291 a0001c0004t0015g0252 a0001c0006t0007g0343 a0001c0006t0007g0344 a0001c0006t0007g0348 a0001c0006t0007g0349 a0001c0007t0002g0017 a0001c0007t0002g0217 a0001c0007t0004g0293 a0001c0007t0010g0289 a0001c0008t0001g0223 a0001c0008t0008g0224 a0001c0008t0008g0225 a0001c0012t0007g0318 a0001c0013t0015g0219 a0001c0015t0001g0084 a0001c0016t0001g0287 a0001c0018t0015g0016 a0001c0019t0030g0218 a0003c0010t0001g0077 a0003c0010t0003g0085 a0003c0010t0006g0086 a0005c0014t0010g0228 a0006c0020t0002g0246 a0007c0017t0001g0361	273	390	0.7000	-18	c.-51 others(39): Show c.-513+12112_-513+12129delGTGCATGTGTGTGCATGC	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding	1/7			chr10	TogoVar
CHST3_chr10_71959395_72018558	71976777	ACTTTTCT others(11): Show ACTTTTCTCAAACAAGAGG	A A	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0027 a0002c0008t0027	a0002c0008t0027g0034 a0002c0008t0027g0034	1	370	0.0027	-18	c.-10 others(39): Show c.-108+12086_-108+12103delTTTCTCAAACAAGAGGCT	CHST3	ENSG00000122863.6	transcript	ENST00000373115.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
CHST3_chr10_71959395_72018558	72005283	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTC	T T	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0068 a0002c0002t0068	a0002c0002t0068g0257 a0002c0002t0068g0257	1	290	0.0034	-18	c.-10 others(35): Show c.-107-435_-107-418delCTGTGTGTGTGTGTGTGT	CHST3	ENSG00000122863.6	transcript	ENST00000373115.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
CHST6_chr16_75467052_75500441	75491178	AAAAAAAA others(11): Show AAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03453.hp2 HG03209.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0033 a0001c0001t0004 a0001c0001t0033	a0001c0001t0004g0039 a0001c0001t0033g0040 a0001c0001t0004g0039 a0001c0001t0033g0040	2	367	0.0054	-18	c.-92 others(35): Show c.-92+3744_-92+3761delATATATTTTTTTTTTTTT	CHST6	ENSG00000183196.10	transcript	ENST00000332272.9	protein_coding	1/2			chr16	TogoVar
CHST8_chr19_33616953_33778506	33618397	GTCTTCTT others(11): Show GTCTTCTTCTTCTTCTTCT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG01884.hp2 HG03540.hp1 HG01884.hp1 HG01884.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0039 a0001c0001t0001g0155 a0001c0002t0001g0176 a0001c0001t0001g0039 a0001c0001t0001g0155 a0001c0002t0001g0176	3	183	0.0164	-18	c.-40 others(29): Show c.-4062_-4045delTCTTCTTCTTCTTCTTCT	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding		3555		chr19	TogoVar
CHST8_chr19_33616953_33778506	33618406	TTCTTCTT others(11): Show TTCTTCTTCTTCTTCCTCG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 HG00621.hp2 HG01168.hp2 others(6): Show HG00280.hp2 HG00621.hp2 HG01168.hp2 HG01169.hp2 HG02630.hp1 HG03239.hp1 HG06807.hp1 NA18522.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0003t0003	a0001c0001t0001g0143 a0001c0001t0001g0187 a0001c0001t0001g0190 others(6): Show a0001c0001t0001g0143 a0001c0001t0001g0187 a0001c0001t0001g0190 a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0241 a0001c0001t0004g0003 a0001c0002t0001g0203 a0001c0003t0003g0234	9	234	0.0385	-18	c.-40 others(29): Show c.-4053_-4036delTCTTCTTCTTCTTCCTCG	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding		3546		chr19	TogoVar
CHST8_chr19_33616953_33778506	33618424	GTCTTCTT others(11): Show GTCTTCTTCTTCTTCTTCT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 HG02451.hp2 HG02976.hp2 others(3): Show HG02040.hp1 HG02451.hp2 HG02976.hp2 HG03486.hp2 NA18973.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001	a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0124 others(3): Show a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0008g0117 a0001c0001t0009g0174 a0001c0002t0001g0161	6	121	0.0496	-18	c.-40 others(29): Show c.-4035_-4018delTCTTCTTCTTCTTCTTCT	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding		3528		chr19	TogoVar
CHST8_chr19_33616953_33778506	33694169	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01168.hp2 HG01169.hp2 others(5): Show HG00639.hp2 HG01168.hp2 HG01169.hp2 HG02300.hp2 HG02647.hp2 NA18944.hp2 NA19002.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0103 others(5): Show a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0103 a0001c0001t0001g0142 a0001c0001t0001g0171 a0001c0001t0001g0187 a0001c0001t0001g0193 a0001c0001t0001g0200	8	25	0.3200	-18	c.130 others(35): Show c.130+4812_130+4829delTATATATATATATATATA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST8_chr19_33616953_33778506	33757504	AAGAAAGA others(11): Show AAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0246 a0001c0001t0001g0246	1	203	0.0049	-18	c.131 others(37): Show c.131-13889_131-13872delGAAAGAAAGAAAGAAAGA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST9_chr18_26901481_27190308	26975725	GTATATAT others(11): Show GTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0078 a0001c0001t0078	a0001c0001t0078g0245 a0001c0001t0078g0245	1	21	0.0476	-18	c.203 others(37): Show c.203-31377_203-31360delTATATATATATATATATA	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	4/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27052218	TTATATAT others(11): Show TTATATATATGTATGTGTG	T T	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0085 a0001c0001t0039g0085	1	260	0.0038	-18	c.122 others(35): Show c.122-3733_122-3716delCACACATACATATATATA	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	2/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27053130	GGAAGAAG others(11): Show GGAAGAAGAAGAAGAAGAA	G G	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0065 a0001c0001t0065	a0001c0001t0065g0073 a0001c0001t0065g0073	1	92	0.0109	-18	c.122 others(35): Show c.122-4645_122-4628delTTCTTCTTCTTCTTCTTC	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	2/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27053256	AAGAAGGA others(11): Show AAGAAGGAGAAGGAGAAGG	A A	intron_variant intron_variant	MODIFIER	NA19064.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0203 a0001c0001t0012g0203	1	167	0.0060	-18	c.122 others(35): Show c.122-4771_122-4754delCCTTCTCCTTCTCCTTCT	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	2/5			chr18	TogoVar
CHST9_chr18_26901481_27190308	27152444	GGTTATTG others(11): Show GGTTATTGCAAAATGATTT	G G	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0085 a0001c0001t0039g0085	1	260	0.0038	-18	c.-96 others(35): Show c.-96-9557_-96-9540delAAATCATTTTGCAATAAC	CHST9	ENSG00000154080.14	transcript	ENST00000618847.5	protein_coding	1/5			chr18	TogoVar
CHSY1_chr15_101170727_101257048	101255803	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0003 a0001c0009t0003	a0001c0009t0003g0226 a0001c0009t0003g0226	1	80	0.0125	-18	c.-43 others(29): Show c.-4365_-4348delCACACACACACACACACA	CHSY1	ENSG00000131873.7	transcript	ENST00000254190.4	protein_coding		3756		chr15	TogoVar
CHSY3_chr5_129899465_130191634	129932103	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp2 others(86): Show HG00099.hp1 HG00099.hp2 HG00323.hp2 HG00423.hp2 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01175.hp2 HG01192.hp1 HG01256.hp2 HG01257.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01952.hp1 HG02015.hp2 HG02027.hp1 HG02055.hp2 HG02080.hp1 HG02109.hp2 HG02132.hp2 HG02155.hp1 HG02273.hp1 HG02280.hp2 HG02559.hp1 HG02572.hp2 HG02615.hp2 HG02735.hp1 HG02886.hp2 HG02895.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03669.hp1 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG04115.hp2 HG04184.hp2 NA18747.hp1 NA18906.hp2 NA18941.hp2 NA18945.hp2 NA18948.hp2 NA18949.hp2 NA18965.hp1 NA18968.hp1 NA18970.hp1 NA18971.hp2 NA18977.hp2 NA18980.hp2 NA18983.hp2 NA18985.hp1 NA18986.hp2 NA18987.hp2 NA18989.hp1 NA18992.hp1 NA18999.hp2 NA19001.hp1 NA19002.hp2 NA19005.hp2 NA19009.hp2 NA19012.hp1 NA19030.hp2 NA19060.hp1 NA19062.hp2 NA19064.hp2 NA19070.hp1 NA19082.hp2 NA19084.hp1 NA19089.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0010	a0001c0001 a0001c0002 a0001c0008 others(7): Show a0001c0001 a0001c0002 a0001c0008 a0001c0015 a0002c0003 a0002c0005 a0002c0014 a0003c0006 a0005c0010 a0010c0020	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0008t0001 a0001c0015t0001 a0002c0003t0005 a0002c0005t0001 a0002c0005t0005 a0002c0005t0019 a0002c0014t0012 a0003c0006t0003 a0005c0010t0003 a0010c0020t0003	a0001c0001t0001g0231 a0001c0001t0002g0144 a0001c0001t0002g0145 others(86): Show a0001c0001t0001g0231 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0184 a0001c0001t0002g0236 a0001c0002t0001g0003 a0001c0002t0001g0007 a0001c0002t0001g0015 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0002t0001g0028 a0001c0002t0001g0032 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0071 a0001c0002t0001g0074 a0001c0002t0001g0075 a0001c0002t0001g0076 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0001g0087 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0090 a0001c0002t0001g0091 a0001c0002t0001g0092 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0095 a0001c0002t0001g0096 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0001g0104 a0001c0002t0001g0106 a0001c0002t0001g0109 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0115 a0001c0002t0001g0272 a0001c0002t0001g0273 a0001c0008t0001g0006 a0001c0008t0001g0044 a0001c0008t0001g0062 a0001c0015t0001g0050 a0002c0003t0005g0233 a0002c0005t0001g0010 a0002c0005t0001g0013 a0002c0005t0001g0014 a0002c0005t0001g0026 a0002c0005t0001g0029 a0002c0005t0001g0045 a0002c0005t0001g0048 a0002c0005t0001g0049 a0002c0005t0001g0055 a0002c0005t0001g0061 a0002c0005t0001g0069 a0002c0005t0001g0070 a0002c0005t0001g0103 a0002c0005t0005g0002 a0002c0005t0005g0004 a0002c0005t0005g0005 a0002c0005t0005g0009 a0002c0005t0005g0012 a0002c0005t0005g0056 a0002c0005t0005g0079 a0002c0005t0019g0078 a0002c0014t0012g0058 a0003c0006t0003g0008 a0003c0006t0003g0025 a0003c0006t0003g0054 a0003c0006t0003g0072 a0003c0006t0003g0077 a0003c0006t0003g0085 a0003c0006t0003g0086 a0003c0006t0003g0110 a0003c0006t0003g0116 a0005c0010t0003g0027 a0010c0020t0003g0057	89	134	0.6642	-18	c.108 others(39): Show c.1086+23766_1086+23783delATATATATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130020422	AATATATA others(11): Show AATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02630.hp2 HG02976.hp1 HG02615.hp2 HG02630.hp2 HG02976.hp1	a0002 a0003 a0002 a0003	a0002c0005 a0003c0004 a0002c0005 a0003c0004	a0002c0005t0001 a0003c0004t0004 a0002c0005t0001 a0003c0004t0004	a0002c0005t0001g0014 a0003c0004t0004g0161 a0003c0004t0004g0162 a0002c0005t0001g0014 a0003c0004t0004g0161 a0003c0004t0004g0162	3	222	0.0135	-18	c.108 others(41): Show c.1086+112085_1086+112102delATATATATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130020445	ATATATAT others(11): Show ATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18946.hp1 NA18965.hp2 others(2): Show NA18941.hp1 NA18946.hp1 NA18965.hp2 NA18966.hp1 NA18991.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0002 a0003c0004t0004 a0001c0001t0002 a0003c0004t0004	a0001c0001t0002g0189 a0001c0001t0002g0192 a0001c0001t0002g0194 others(2): Show a0001c0001t0002g0189 a0001c0001t0002g0192 a0001c0001t0002g0194 a0001c0001t0002g0223 a0003c0004t0004g0206	5	265	0.0189	-18	c.108 others(41): Show c.1086+112087_1086+112104delATATATATATATATATTT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130020447	ATATATAT others(11): Show ATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG02273.hp2 HG02735.hp2 NA18949.hp1 others(9): Show HG02273.hp2 HG02735.hp2 NA18949.hp1 NA18950.hp2 NA18955.hp2 NA18968.hp2 NA18999.hp1 NA19001.hp2 NA19004.hp2 NA19012.hp2 NA19054.hp1 NA19070.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0011	a0001c0001 a0002c0003 a0003c0004 others(1): Show a0001c0001 a0002c0003 a0003c0004 a0011c0019	a0001c0001t0002 a0002c0003t0002 a0003c0004t0004 others(1): Show a0001c0001t0002 a0002c0003t0002 a0003c0004t0004 a0011c0019t0002	a0001c0001t0002g0164 a0001c0001t0002g0166 a0001c0001t0002g0167 others(9): Show a0001c0001t0002g0164 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0172 a0001c0001t0002g0195 a0001c0001t0002g0203 a0001c0001t0002g0207 a0001c0001t0002g0211 a0001c0001t0002g0214 a0002c0003t0002g0221 a0003c0004t0004g0217 a0011c0019t0002g0200	12	250	0.0480	-18	c.108 others(41): Show c.1086+112089_1086+112106delATATATATATATATTTTT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130020449	ATATATAT others(11): Show ATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG02004.hp2 HG02080.hp2 others(7): Show HG01952.hp2 HG02004.hp2 HG02080.hp2 HG02129.hp2 HG02148.hp1 HG02300.hp2 HG03669.hp2 NA18939.hp1 NA18989.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0002 a0001c0001t0002 a0002c0003t0002	a0001c0001t0002g0174 a0001c0001t0002g0190 a0001c0001t0002g0193 others(7): Show a0001c0001t0002g0174 a0001c0001t0002g0190 a0001c0001t0002g0193 a0001c0001t0002g0202 a0001c0001t0002g0215 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0222 a0001c0001t0002g0245 a0002c0003t0002g0216	10	257	0.0389	-18	c.108 others(41): Show c.1086+112091_1086+112108delATATATATATATTTTTTT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHSY3_chr5_129899465_130191634	130143792	ATATATAT others(11): Show ATATATATATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02135.hp1 HG04204.hp1 others(1): Show HG02027.hp1 HG02135.hp1 HG04204.hp1 NA18968.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0005 a0001c0002 a0002c0005	a0001c0002t0001 a0002c0005t0001 a0001c0002t0001 a0002c0005t0001	a0001c0002t0001g0016 a0001c0002t0001g0052 a0002c0005t0001g0048 others(1): Show a0001c0002t0001g0016 a0001c0002t0001g0052 a0002c0005t0001g0048 a0002c0005t0001g0055	4	272	0.0147	-18	c.108 others(39): Show c.1087-40423_1087-40406delGTGTGTATATATATATAT	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHTOP_chr1_153629066_153651306	153651166	TATATAGA others(11): Show TATATAGATATATAGATAG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp1 HG01975.hp1 HG02055.hp1 others(2): Show HG01081.hp1 HG01975.hp1 HG02055.hp1 HG02647.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0028 a0001c0001t0004g0053 a0001c0001t0004g0054 others(1): Show a0001c0001t0004g0028 a0001c0001t0004g0053 a0001c0001t0004g0054 a0001c0001t0004g0055	5	369	0.0136	-18	c.58 others(29): Show c.5898_*5915delATATAGATATATAGATAG	CHTOP	ENSG00000160679.14	transcript	ENST00000368694.8	protein_coding		4861		chr1	TogoVar
CHURC1_chr14_64909455_64940368	64935425	GTGGGGAT others(11): Show GTGGGGATAATTGGAAACA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0188 a0001c0001t0005g0188	1	390	0.0026	-18	c.31 others(29): Show c.3196_*3213delTGGGGATAATTGGAAACA	CHURC1	ENSG00000258289.10	transcript	ENST00000549115.7	protein_coding		58		chr14	TogoVar
CIB2_chr15_78099606_78136445	78110871	ACAGGTCT others(11): Show ACAGGTCTGCCAACTACAG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00642.hp1 HG01109.hp2 others(38): Show HG00323.hp1 HG00642.hp1 HG01109.hp2 HG01175.hp1 HG01255.hp1 HG01257.hp1 HG01346.hp2 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01975.hp2 HG02004.hp1 HG02004.hp2 HG02257.hp2 HG02300.hp1 HG02486.hp1 HG02602.hp2 HG02735.hp1 HG02809.hp2 HG03017.hp2 HG03225.hp1 HG03239.hp2 HG03540.hp2 HG03654.hp2 HG03688.hp2 HG03831.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18941.hp2 NA18951.hp2 NA18972.hp1 NA18979.hp1 NA18980.hp1 NA19002.hp2 NA19030.hp1 NA19240.hp1 NA20300.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0005 a0001c0002 a0002c0005	a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 others(2): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0010 a0002c0005t0001	a0001c0002t0001g0011 a0001c0002t0001g0018 a0001c0002t0001g0040 others(26): Show a0001c0002t0001g0011 a0001c0002t0001g0018 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0254 a0001c0002t0001g0261 a0001c0002t0001g0274 a0001c0002t0001g0275 a0001c0002t0001g0276 a0001c0002t0001g0286 a0001c0002t0001g0288 a0001c0002t0002g0008 a0001c0002t0002g0022 a0001c0002t0002g0023 a0001c0002t0002g0095 a0001c0002t0002g0096 a0001c0002t0002g0097 a0001c0002t0002g0112 a0001c0002t0002g0113 a0001c0002t0002g0114 a0001c0002t0002g0115 a0001c0002t0002g0116 a0001c0002t0002g0117 a0001c0002t0002g0118 a0001c0002t0005g0260 a0001c0002t0005g0285 a0001c0002t0010g0046 a0002c0005t0001g0130 a0002c0005t0001g0277	41	388	0.1057	-18	c.198 others(33): Show c.198+276_198+293delCTGTAGTTGGCAGACCTG	CIB2	ENSG00000136425.14	transcript	ENST00000258930.8	protein_coding	3/5			chr15	TogoVar
CIB4_chr2_26576205_26646366	26589042	TTCTTCTT others(11): Show TTCTTCTTCTTCTTCTTCC	T T	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02280.hp1 HG03471.hp2 others(2): Show HG01358.hp1 HG02280.hp1 HG03471.hp2 NA18949.hp1 NA18951.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0001c0001t0001 a0001c0001t0002 a0002c0002t0002	a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0002g0218 others(2): Show a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0002g0218 a0001c0001t0002g0244 a0002c0002t0002g0286	5	330	0.0152	-18	c.329 others(35): Show c.329-5162_329-5145delGGAAGAAGAAGAAGAAGA	CIB4	ENSG00000157884.11	transcript	ENST00000288861.5	protein_coding	4/6			chr2	TogoVar
CIB4_chr2_26576205_26646366	26589048	TTCTTCTT others(11): Show TTCTTCTTCTTCCTCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01255.hp1 HG01934.hp1 others(2): Show HG00738.hp1 HG01255.hp1 HG01934.hp1 NA18943.hp2 NA18985.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0290 a0002c0002t0002g0194 a0002c0002t0002g0284 others(2): Show a0001c0001t0001g0290 a0002c0002t0002g0194 a0002c0002t0002g0284 a0002c0002t0002g0322 a0002c0002t0002g0323	5	333	0.0150	-18	c.329 others(35): Show c.329-5168_329-5151delGGAAGAGGAAGAAGAAGA	CIB4	ENSG00000157884.11	transcript	ENST00000288861.5	protein_coding	4/6			chr2	TogoVar
CIB4_chr2_26576205_26646366	26589054	TTCTTCCT others(11): Show TTCTTCCTCTTCCTCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0048 a0002c0002t0002g0048	1	296	0.0034	-18	c.329 others(35): Show c.329-5174_329-5157delGGAAGAGGAAGAGGAAGA	CIB4	ENSG00000157884.11	transcript	ENST00000288861.5	protein_coding	4/6			chr2	TogoVar
CIB4_chr2_26576205_26646366	26589090	TTCTTCTT others(11): Show TTCTTCTTCTTCTTCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0151 a0002c0003t0002g0151	1	332	0.0030	-18	c.329 others(35): Show c.329-5210_329-5193delGGAAGAAGAAGAAGAAGA	CIB4	ENSG00000157884.11	transcript	ENST00000288861.5	protein_coding	4/6			chr2	TogoVar
CIDEA_chr18_12249361_12282595	12250708	GCAGTACA others(11): Show GCAGTACAATTGTTCTTAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0395 a0001c0001t0001g0395	1	446	0.0022	-18	c.-36 others(29): Show c.-3675_-3658delCAGTACAATTGTTCTTAA	CIDEA	ENSG00000176194.18	transcript	ENST00000320477.10	protein_coding		3652		chr18	TogoVar
CINP_chr14_102343282_102367890	102359219	AATAACTA others(11): Show AATAACTAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01243.hp2 HG02735.hp1 HG00280.hp1 HG01243.hp2 HG02735.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0025 a0003c0004t0001g0090 a0003c0004t0001g0025 a0003c0004t0001g0090	3	418	0.0072	-18	c.176 others(33): Show c.176+182_176+199delATATATATATTTAGTTAT	CINP	ENSG00000100865.15	transcript	ENST00000216756.11	protein_coding	2/4			chr14	TogoVar
CISH_chr3_50601489_50616774	50602054	GCACACAC others(11): Show GCACACACACACACACACA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02886.hp1 NA20905.hp1 HG02886.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	20	0.1000	-18	c.55 others(29): Show c.5535_*5552delTGTGTGTGTGTGTGTGTG	CISH	ENSG00000114737.16	transcript	ENST00000348721.4	protein_coding		4434		chr3	TogoVar
CIT_chr12_119680791_119882320	119724930	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp2 HG02258.hp1 others(12): Show HG01168.hp1 HG01169.hp2 HG02258.hp1 HG02280.hp2 HG02622.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02965.hp2 HG02976.hp1 HG03453.hp2 HG03540.hp2 NA20300.hp2	a0002 a0005 a0002 a0005	a0002c0004 a0005c0018 a0002c0004 a0005c0018	a0002c0004t0003 a0002c0004t0007 a0002c0004t0011 others(2): Show a0002c0004t0003 a0002c0004t0007 a0002c0004t0011 a0002c0004t0019 a0005c0018t0006	a0002c0004t0003g0044 a0002c0004t0007g0033 a0002c0004t0007g0050 others(12): Show a0002c0004t0003g0044 a0002c0004t0007g0033 a0002c0004t0007g0050 a0002c0004t0007g0052 a0002c0004t0007g0053 a0002c0004t0007g0054 a0002c0004t0007g0055 a0002c0004t0007g0057 a0002c0004t0011g0035 a0002c0004t0011g0038 a0002c0004t0011g0056 a0002c0004t0011g0162 a0002c0004t0019g0051 a0005c0018t0006g0005 a0005c0018t0006g0006	15	63	0.2381	-18	c.359 others(37): Show c.3592-3499_3592-3482delTTTTTTTTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	28/47			chr12	TogoVar

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