Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TANC2_chr17_62961235_63432703	63055983	AAAAAAAA others(12): Show AAAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0110 a0001c0001t0002g0110	1	266	0.0038	-19	c.68- others(36): Show c.68-17958_68-17940delAAAAAAATATATATATATA	TANC2	ENSG00000170921.16	transcript	ENST00000689528.1	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr17	TogoVar
TANC2_chr17_62961235_63432703	63055985	AAAAAAAT others(12): Show AAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02630.hp2 HG03471.hp2 HG00639.hp2 HG02630.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0002g0109 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0002g0109	3	266	0.0113	-19	c.68- others(36): Show c.68-17956_68-17938delAAAAATATATATATATATA	TANC2	ENSG00000170921.16	transcript	ENST00000689528.1	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr17	TogoVar
TANGO6_chr16_68838531_69090182	69072064	TGTGTAGA others(12): Show TGTGTAGAGAGAGGGAGACC	T T	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03516.hp1 HG02559.hp1 HG03516.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0164 a0003c0004t0001g0201 a0003c0004t0001g0164 a0003c0004t0001g0201	2	210	0.0095	-19	c.310 others(40): Show c.3109-11416_3109-11398delAGAGAGAGGGAGACCGTGT	TANGO6	ENSG00000103047.8	transcript	ENST00000261778.2	protein_coding	17/17		INFO_REALIGN_3_PRIME	chr16	TogoVar
TAOK3_chr12_118144801_118377907	118168986	TTCCTTCC others(12): Show TTCCTTCCTTCCTTCCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02647.hp1 NA18906.hp2 HG02572.hp2 HG02647.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291	3	314	0.0096	-19	c.189 others(38): Show c.1899+3452_1899+3470delGAAAGGAAGGAAGGAAGGA	TAOK3	ENSG00000135090.14	transcript	ENST00000392533.8	protein_coding	17/20			chr12	TogoVar
TAPT1_chr4_16155505_16231471	16228662	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 NA19083.hp2 HG03098.hp2 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0037 a0001c0001t0004g0168 a0001c0001t0002g0037 a0001c0001t0004g0168	2	382	0.0052	-19	c.-22 others(30): Show c.-2224_-2206delTTTTTTTTTTTTTTTTTTT	TAPT1	ENSG00000169762.17	transcript	ENST00000405303.7	protein_coding		2192		chr4	TogoVar
TAS1R1_chr1_6550307_6584755	6555866	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0170 a0001c0001t0001g0170	1	400	0.0025	-19	c.191 others(34): Show c.191+307_191+325delTTTTTTTTTTTTTTTTTTT	TAS1R1	ENSG00000173662.21	transcript	ENST00000333172.11	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
TAS2R1_chr5_9622347_9635351	9633285	GTGTGTAT others(12): Show GTGTGTATATTATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0000 a0001c0001t0035g0000	1	458	0.0022	-19	c.-32 others(30): Show c.-3272_-3254delTATATATATAATATACACA	TAS2R1	ENSG00000169777.7	transcript	ENST00000382492.4	protein_coding		2935		chr5	TogoVar
TAS2R39_chr7_143178419_143189435	143187359	AAATATAT others(12): Show AAATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	368	0.0027	-19	c.29 others(30): Show c.2925_*2943delAATATATATATATATATAT	TAS2R39	ENSG00000236398.2	transcript	ENST00000446620.1	protein_coding		2925		chr7	TogoVar
TAS2R39_chr7_143178419_143189435	143187361	ATATATAT others(12): Show ATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp2 HG03041.hp1 HG06807.hp2 HG01192.hp2 HG03041.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	3	368	0.0082	-19	c.29 others(30): Show c.2927_*2945delTATATATATATATATATAT	TAS2R39	ENSG00000236398.2	transcript	ENST00000446620.1	protein_coding		2927		chr7	TogoVar
TAX1BP1_chr7_27735162_27834767	27766419	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0173 a0001c0001t0002g0173	1	362	0.0028	-19	c.453 others(34): Show c.453+426_453+444delAAAAAAAAAAAAAAAAAAA	TAX1BP1	ENSG00000106052.14	transcript	ENST00000396319.7	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
TBC1D14_chr4_6904826_7038114	6943867	TTTAAATC others(12): Show TTTAAATCTAAATATGTTTC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00642.hp2 others(32): Show HG00280.hp1 HG00323.hp2 HG00642.hp2 HG01123.hp1 HG01123.hp2 HG01516.hp1 HG01884.hp1 HG01891.hp1 HG01978.hp2 HG02145.hp1 HG02145.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02615.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02896.hp2 HG02922.hp1 HG02976.hp2 HG03041.hp2 HG03225.hp1 HG03486.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG06807.hp1 NA18522.hp1 NA19240.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0008 others(1): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002	a0001c0001t0003 a0001c0003t0002 a0001c0003t0003 others(2): Show a0001c0001t0003 a0001c0003t0002 a0001c0003t0003 a0001c0008t0003 a0002c0002t0004	a0001c0001t0003g0030 a0001c0001t0003g0043 a0001c0001t0003g0048 others(32): Show a0001c0001t0003g0030 a0001c0001t0003g0043 a0001c0001t0003g0048 a0001c0001t0003g0058 a0001c0001t0003g0062 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0087 a0001c0001t0003g0138 a0001c0001t0003g0141 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0302 a0001c0003t0002g0033 a0001c0003t0003g0031 a0001c0003t0003g0032 a0001c0003t0003g0268 a0001c0003t0003g0301 a0001c0008t0003g0041 a0002c0002t0004g0017	35	304	0.1151	-19	c.722 others(38): Show c.722+19759_722+19777delAAATCTAAATATGTTTCTT	TBC1D14	ENSG00000132405.19	transcript	ENST00000409757.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D1_chr4_37886084_38144173	38039104	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG02257.hp2 others(12): Show HG01167.hp2 HG01169.hp1 HG02257.hp2 HG02572.hp1 HG02622.hp2 HG02896.hp2 HG03098.hp2 HG03130.hp1 HG03195.hp1 HG03225.hp2 HG03486.hp1 HG03579.hp1 NA18522.hp2 NA18906.hp2 NA19240.hp1	a0001 a0015 a0021 a0001 a0015 a0021	a0001c0001 a0001c0005 a0015c0028 others(1): Show a0001c0001 a0001c0005 a0015c0028 a0021c0040	a0001c0001t0009 a0001c0001t0027 a0001c0001t0035 others(4): Show a0001c0001t0009 a0001c0001t0027 a0001c0001t0035 a0001c0005t0001 a0001c0005t0007 a0015c0028t0002 a0021c0040t0009	a0001c0001t0009g0125 a0001c0001t0009g0127 a0001c0001t0009g0138 others(12): Show a0001c0001t0009g0125 a0001c0001t0009g0127 a0001c0001t0009g0138 a0001c0001t0009g0139 a0001c0001t0009g0141 a0001c0001t0009g0143 a0001c0001t0009g0144 a0001c0001t0009g0249 a0001c0001t0027g0244 a0001c0001t0035g0235 a0001c0005t0001g0040 a0001c0005t0007g0025 a0015c0028t0002g0002 a0015c0028t0002g0003 a0021c0040t0009g0126	15	310	0.0484	-19	c.141 others(38): Show c.1413+3419_1413+3437delTTTTTTTTTTTTTTTTTTT	TBC1D1	ENSG00000065882.18	transcript	ENST00000698857.1	protein_coding	8/21		INFO_REALIGN_3_PRIME	chr4	TogoVar
TBC1D20_chr20_430480_467533	453153	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19006.hp2 NA19006.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0048 a0001c0001t0002g0048	1	402	0.0025	-19	c.71- others(34): Show c.71-5098_71-5080delTTTTTTTTTTTTTTTTTTT	TBC1D20	ENSG00000125875.15	transcript	ENST00000354200.5	protein_coding	1/7			chr20	TogoVar
TBC1D21_chr15_73868564_73894214	73876199	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02896.hp1 NA18939.hp2 others(7): Show HG02258.hp1 HG02896.hp1 NA18939.hp2 NA18963.hp1 NA18969.hp2 NA18986.hp1 NA18987.hp2 NA19009.hp2 NA19062.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0023 a0001c0001t0001g0060 a0001c0001t0001g0061 others(4): Show a0001c0001t0001g0023 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0129 a0001c0001t0001g0172 a0001c0001t0001g0173 a0002c0002t0001g0033	10	382	0.0262	-19	c.60+ others(34): Show c.60+2458_60+2476delTTTTTTTTTTTTTTTTTTT	TBC1D21	ENSG00000167139.9	transcript	ENST00000300504.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
TBC1D22A_chr22_46757650_47180693	46920375	AGCTCAAA others(12): Show AGCTCAAAGCTGGGTATTCT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02257.hp1 others(7): Show HG01243.hp2 HG01884.hp1 HG02257.hp1 HG02258.hp1 HG02622.hp1 HG02895.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0020 a0001c0004t0022	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0042 others(7): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0042 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0052 a0001c0001t0004g0093 a0001c0001t0005g0104 a0001c0001t0020g0038 a0001c0004t0022g0033	10	112	0.0893	-19	c.101 others(38): Show c.1015+8188_1015+8206delGCTCAAAGCTGGGTATTCT	TBC1D22A	ENSG00000054611.14	transcript	ENST00000337137.9	protein_coding	8/12			chr22	TogoVar
TBC1D22A_chr22_46757650_47180693	46984366	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG02735.hp2 HG00639.hp1 HG00639.hp2 HG02735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0071 a0001c0001t0001g0084 a0001c0001t0003g0111 a0001c0001t0001g0071 a0001c0001t0001g0084 a0001c0001t0003g0111	3	112	0.0268	-19	c.112 others(39): Show c.1125+9989_1125+10007delAAAAAAAAAAAAAAAAAAA	TBC1D22A	ENSG00000054611.14	transcript	ENST00000337137.9	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr22	TogoVar
TBC1D22B_chr6_37252772_37337970	37267337	TATAATAT others(12): Show TATAATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01361.hp1 HG02723.hp2 HG01243.hp1 HG01361.hp1 HG02723.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0031 a0001c0002t0006g0032 a0001c0002t0006g0033 a0001c0002t0006g0031 a0001c0002t0006g0032 a0001c0002t0006g0033	3	222	0.0135	-19	c.57- others(34): Show c.57-2253_57-2235delATATATATATACACACATA	TBC1D22B	ENSG00000065491.8	transcript	ENST00000373491.3	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
TBC1D2_chr9_98194011_98260649	98224275	CTTTTCTT others(12): Show CTTTTCTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0283 a0003c0004t0001g0283	1	366	0.0027	-19	c.979 others(36): Show c.979-3066_979-3048delAAAAAAAAAAAAAAGAAAA	TBC1D2	ENSG00000095383.20	transcript	ENST00000465784.7	protein_coding	5/12			chr9	TogoVar
TBC1D4_chr13_75278503_75487169	75379887	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01074.hp1 HG01074.hp2 others(49): Show HG00738.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp2 HG01106.hp2 HG01175.hp2 HG01261.hp2 HG01496.hp2 HG01517.hp1 HG01978.hp2 HG01981.hp2 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02257.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02630.hp1 HG02698.hp2 HG02818.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03834.hp1 HG04115.hp2 HG04184.hp2 HG06807.hp2 NA18970.hp1 NA18981.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19084.hp1 NA20905.hp1 NA21309.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0007 a0009 a0013 a0016 a0017	a0001c0001 a0001c0003 a0001c0004 others(21): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0010 a0001c0011 a0001c0032 a0001c0038 a0002c0002 a0002c0017 a0002c0022 a0002c0046 a0003c0006 a0003c0007 a0004c0009 a0004c0012 a0004c0020 a0004c0044 a0005c0016 a0007c0036 a0009c0019 a0013c0047 a0016c0050 a0017c0040	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(41): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0011 a0001c0001t0014 a0001c0001t0015 a0001c0003t0003 a0001c0003t0019 a0001c0004t0001 a0001c0004t0023 a0001c0005t0001 a0001c0005t0003 a0001c0005t0034 a0001c0010t0015 a0001c0010t0016 a0001c0010t0022 a0001c0011t0036 a0001c0032t0001 a0001c0038t0003 a0002c0002t0004 a0002c0002t0005 a0002c0002t0010 a0002c0017t0005 a0002c0022t0041 a0002c0046t0004 a0003c0006t0002 a0003c0006t0009 a0003c0006t0019 a0003c0006t0038 a0003c0007t0001 a0003c0007t0003 a0003c0007t0024 a0004c0009t0006 a0004c0009t0008 a0004c0012t0026 a0004c0012t0027 a0004c0020t0012 a0004c0044t0004 a0005c0016t0003 a0007c0036t0012 a0009c0019t0021 a0013c0047t0002 a0016c0050t0003 a0017c0040t0010	a0001c0001t0001g0058 a0001c0001t0001g0073 a0001c0001t0002g0057 others(49): Show a0001c0001t0001g0058 a0001c0001t0001g0073 a0001c0001t0002g0057 a0001c0001t0007g0049 a0001c0001t0011g0003 a0001c0001t0011g0020 a0001c0001t0014g0014 a0001c0001t0015g0021 a0001c0003t0003g0183 a0001c0003t0019g0207 a0001c0004t0001g0040 a0001c0004t0023g0015 a0001c0005t0001g0127 a0001c0005t0003g0151 a0001c0005t0003g0152 a0001c0005t0003g0176 a0001c0005t0003g0205 a0001c0005t0034g0145 a0001c0010t0015g0017 a0001c0010t0016g0019 a0001c0010t0022g0012 a0001c0011t0036g0031 a0001c0032t0001g0130 a0001c0032t0001g0154 a0001c0038t0003g0059 a0002c0002t0004g0128 a0002c0002t0004g0208 a0002c0002t0005g0129 a0002c0002t0010g0199 a0002c0017t0005g0206 a0002c0022t0041g0096 a0002c0046t0004g0212 a0003c0006t0002g0131 a0003c0006t0002g0158 a0003c0006t0009g0194 a0003c0006t0019g0209 a0003c0006t0038g0177 a0003c0007t0001g0060 a0003c0007t0003g0030 a0003c0007t0024g0002 a0004c0009t0006g0120 a0004c0009t0008g0165 a0004c0012t0026g0005 a0004c0012t0027g0010 a0004c0020t0012g0006 a0004c0044t0004g0166 a0005c0016t0003g0114 a0007c0036t0012g0007 a0009c0019t0021g0004 a0013c0047t0002g0146 a0016c0050t0003g0139 a0017c0040t0010g0115	52	214	0.2430	-19	c.499 others(38): Show c.499-17299_499-17281delAAAAAAAAAAAAAAAAAAA	TBC1D4	ENSG00000136111.14	transcript	ENST00000377636.8	protein_coding	1/20			chr13	TogoVar
TBC1D5_chr3_17152168_17747631	17401332	CATATATG others(12): Show CATATATGTATAATATACAT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	162	0.0062	-19	c.509 others(36): Show c.509+1830_509+1848delATGTATATTATACATATAT	TBC1D5	ENSG00000131374.15	transcript	ENST00000696125.1	protein_coding	8/22			chr3	TogoVar
TBC1D5_chr3_17152168_17747631	17591233	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03098.hp2 HG03209.hp2 others(2): Show HG02572.hp1 HG03098.hp2 HG03209.hp2 NA18522.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0031 a0001c0001t0001g0082 a0001c0001t0001g0106 others(2): Show a0001c0001t0001g0031 a0001c0001t0001g0082 a0001c0001t0001g0106 a0001c0001t0001g0149 a0001c0001t0008g0081	5	162	0.0309	-19	c.-36 others(38): Show c.-36+32597_-36+32615delTTTTTTTTTTTTTTTTTTT	TBC1D5	ENSG00000131374.15	transcript	ENST00000696125.1	protein_coding	2/22			chr3	TogoVar
TBC1D5_chr3_17152168_17747631	17591248	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0021 a0002c0002t0021	a0002c0002t0021g0015 a0002c0002t0021g0015	1	162	0.0062	-19	c.-36 others(38): Show c.-36+32582_-36+32600delGTTTTTTTTTTTTTTTTTT	TBC1D5	ENSG00000131374.15	transcript	ENST00000696125.1	protein_coding	2/22			chr3	TogoVar
TBC1D9B_chr5_179857071_179912897	179906487	TATGACAC others(12): Show TATGACACACTGGCGCGCTG	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA18906.hp2 HG02451.hp2 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0005 a0002c0003 a0001c0005 a0002c0003	a0001c0005t0006 a0002c0003t0006 a0001c0005t0006 a0002c0003t0006	a0001c0005t0006g0302 a0002c0003t0006g0301 a0001c0005t0006g0302 a0002c0003t0006g0301	2	362	0.0055	-19	c.118 others(36): Show c.118+1198_118+1216delCAGCGCGCCAGTGTGTCAT	TBC1D9B	ENSG00000197226.13	transcript	ENST00000355235.8	protein_coding	1/20			chr5	TogoVar
TBC1D9_chr4_140615782_140761385	140689401	CTTCCCTT others(12): Show CTTCCCTTCCCTTCCCCCTT	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02896.hp2 HG03471.hp1 others(2): Show HG02886.hp1 HG02896.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp1	a0001 a0001	a0001c0004 a0001c0013 a0001c0004 a0001c0013	a0001c0004t0001 a0001c0004t0002 a0001c0004t0005 others(1): Show a0001c0004t0001 a0001c0004t0002 a0001c0004t0005 a0001c0013t0011	a0001c0004t0001g0086 a0001c0004t0001g0228 a0001c0004t0002g0260 others(2): Show a0001c0004t0001g0086 a0001c0004t0001g0228 a0001c0004t0002g0260 a0001c0004t0005g0265 a0001c0013t0011g0115	5	298	0.0168	-19	c.242 others(36): Show c.242-2958_242-2940delAAGGGGGAAGGGAAGGGAA	TBC1D9	ENSG00000109436.8	transcript	ENST00000442267.3	protein_coding	2/20			chr4	TogoVar
TBCD_chr17_82747065_82950914	82855235	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0223 a0001c0001t0002g0223	1	318	0.0031	-19	c.131 others(40): Show c.1319-14971_1319-14953delTTTTTTTTTTTTTTTTTTT	TBCD	ENSG00000141556.22	transcript	ENST00000355528.9	protein_coding	13/38		INFO_REALIGN_3_PRIME	chr17	TogoVar
TBCD_chr17_82747065_82950914	82886663	CCCCTCCC others(12): Show CCCCTCCCCTCCCCTCCCCT	C C	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA18940.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0217 a0002c0003t0003g0217	1	318	0.0031	-19	c.153 others(38): Show c.1533+2465_1533+2483delTCCCCTCCCCTCCCCTCCC	TBCD	ENSG00000141556.22	transcript	ENST00000355528.9	protein_coding	15/38		INFO_REALIGN_3_PRIME	chr17	TogoVar
TBCD_chr17_82747065_82950914	82886668	CCCCTCCC others(12): Show CCCCTCCCCTCCCCTCCCCT	C C	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0015 a0002c0003t0015	a0002c0003t0015g0294 a0002c0003t0015g0294	1	318	0.0031	-19	c.153 others(38): Show c.1533+2470_1533+2488delTCCCCTCCCCTCCCCTCCC	TBCD	ENSG00000141556.22	transcript	ENST00000355528.9	protein_coding	15/38		INFO_REALIGN_3_PRIME	chr17	TogoVar
TBL1X_chrX_9460058_9724740	9512780	TGAGCCAC others(12): Show TGAGCCACCGCACCCGGCCA	T T	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03195.hp2 HG02965.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0009 a0001c0003t0026 a0001c0001t0009 a0001c0003t0026	a0001c0001t0009g0191 a0001c0003t0026g0192 a0001c0001t0009g0191 a0001c0003t0026g0192	2	199	0.0101	-19	c.-13 others(40): Show c.-131+10933_-131+10951delAGCCACCGCACCCGGCCAG	TBL1X	ENSG00000101849.18	transcript	ENST00000645353.2	protein_coding	2/17		INFO_REALIGN_3_PRIME	chrX	TogoVar
TBX1_chr22_19755778_19772334	19758302	GGAGGCTC others(12): Show GGAGGCTCCAGCAAGGCACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0001 a0001c0002t0001g0001	1	432	0.0023	-19	c.-25 others(30): Show c.-2541_-2523delGAGGCTCCAGCAAGGCACA	TBX1	ENSG00000184058.16	transcript	ENST00000649276.2	protein_coding		2475		chr22	TogoVar
TBX2_chr17_61394843_61414466	61402952	GAGAGAGA others(12): Show GAGAGAGAGAGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG03017.hp1 HG03130.hp2 others(10): Show HG02132.hp2 HG03017.hp1 HG03130.hp2 HG03834.hp1 NA18747.hp2 NA18954.hp2 NA18957.hp1 NA18963.hp1 NA18997.hp1 NA19004.hp2 NA19074.hp1 NA19084.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0020 a0001c0001t0002g0075 a0001c0001t0008g0007 others(1): Show a0001c0001t0002g0020 a0001c0001t0002g0075 a0001c0001t0008g0007 a0001c0001t0008g0064	13	438	0.0297	-19	c.664 others(33): Show c.664-107_664-89delGAGAGAGAGAGAGAGAGAA	TBX2	ENSG00000121068.14	transcript	ENST00000240328.4	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
TBX5_chr12_114348911_114411144	114384726	CACACACA others(12): Show CACACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0226 a0001c0001t0001g0226	1	390	0.0026	-19	c.755 others(34): Show c.755+731_755+749delTGTGTGTGTGTGTGTGTGT	TBX5	ENSG00000089225.20	transcript	ENST00000405440.7	protein_coding	7/8			chr12	TogoVar
TBXAS1_chr7_139824264_140025293	139951951	AAAGAAAG others(12): Show AAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0182 a0001c0001t0001g0182	1	270	0.0037	-19	c.451 others(36): Show c.451-1414_451-1396delGAAAGAAAGAAAGAAAGAA	TBXAS1	ENSG00000059377.19	transcript	ENST00000448866.7	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
TC2N_chr14_91774746_91872536	91868996	TACCTAAG others(12): Show TACCTAAGCCCAATGACATC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0256 a0001c0001t0002g0256	1	344	0.0029	-19	c.-18 others(30): Show c.-1810_-1792delGATGTCATTGGGCTTAGGT	TC2N	ENSG00000165929.13	transcript	ENST00000435962.7	protein_coding		1461		chr14	TogoVar
TCEA1_chr8_53961556_54027448	54026446	GGAGCACC others(12): Show GGAGCACCAACACCCCCGGC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0205 a0001c0001t0002g0205	1	314	0.0032	-19	c.-43 others(30): Show c.-4340_-4322delGCCGGGGGTGTTGGTGCTC	TCEA1	ENSG00000187735.16	transcript	ENST00000521604.7	protein_coding		3999		chr8	TogoVar
TCEA2_chr20_64058198_64077347	64073626	TGGCCCGC others(12): Show TGGCCCGCCCTGCACCTGGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03491.hp1 HG03492.hp2 homoSapiens_chm13v2.hp1 HG03491.hp1 HG03492.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	3	384	0.0078	-19	c.14 others(30): Show c.1447_*1465delGGCCCGCCCTGCACCTGGA	TCEA2	ENSG00000171703.17	transcript	ENST00000343484.10	protein_coding		1280		chr20	TogoVar
TCEANC_chrX_13648141_13670409	13665949	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18950.hp1 NA18973.hp2 NA18986.hp1 others(2): Show NA18950.hp1 NA18973.hp2 NA18986.hp1 NA19030.hp2 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	5	324	0.0154	-19	c.23 others(30): Show c.2386_*2404delTTTTTTTTTTTTTTTTTTT	TCEANC	ENSG00000176896.9	transcript	ENST00000696128.1	protein_coding		541		chrX	TogoVar
TCERG1L_chr10_131087391_131316721	131090291	TGCCTCTG others(12): Show TGCCTCTGGGGAGGTAATCG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00280.hp1 others(68): Show HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00621.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01109.hp2 HG01168.hp1 HG01169.hp1 HG01255.hp2 HG01258.hp2 HG01261.hp1 HG01361.hp1 HG01496.hp2 HG01515.hp2 HG01884.hp2 HG01952.hp1 HG01978.hp1 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02818.hp1 HG02886.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03239.hp2 HG03486.hp1 HG03516.hp1 HG03579.hp2 HG03831.hp2 HG03927.hp2 HG06807.hp1 NA18747.hp1 NA18906.hp2 NA18942.hp1 NA18983.hp2 NA18990.hp2 NA18999.hp1 NA19043.hp2 NA19057.hp2 NA19060.hp2 NA19065.hp2 NA19240.hp2 NA20300.hp1 NA20905.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0006 a0007 a0008 a0009	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0009 a0002c0004 a0003c0005 a0005c0017 a0006c0014 a0007c0007 a0008c0011 a0009c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0017 a0001c0001t0022 a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0014 a0001c0003t0001 a0001c0009t0007 a0002c0004t0002 a0002c0004t0007 a0003c0005t0002 a0005c0017t0004 a0006c0014t0004 a0007c0007t0007 a0008c0011t0004 a0009c0010t0007	a0001c0001t0001g0056 a0001c0001t0001g0084 a0001c0001t0001g0099 others(68): Show a0001c0001t0001g0056 a0001c0001t0001g0084 a0001c0001t0001g0099 a0001c0001t0002g0230 a0001c0001t0002g0236 a0001c0001t0002g0240 a0001c0001t0002g0242 a0001c0001t0002g0247 a0001c0001t0002g0266 a0001c0001t0002g0270 a0001c0001t0002g0289 a0001c0001t0002g0321 a0001c0001t0003g0114 a0001c0001t0004g0014 a0001c0001t0004g0018 a0001c0001t0004g0024 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0040 a0001c0001t0004g0041 a0001c0001t0004g0049 a0001c0001t0004g0059 a0001c0001t0004g0067 a0001c0001t0004g0080 a0001c0001t0004g0083 a0001c0001t0004g0092 a0001c0001t0004g0098 a0001c0001t0004g0101 a0001c0001t0004g0104 a0001c0001t0007g0198 a0001c0001t0007g0224 a0001c0001t0007g0239 a0001c0001t0007g0259 a0001c0001t0007g0261 a0001c0001t0007g0263 a0001c0001t0007g0276 a0001c0001t0007g0285 a0001c0001t0007g0288 a0001c0001t0007g0312 a0001c0001t0007g0313 a0001c0001t0007g0317 a0001c0001t0007g0318 a0001c0001t0008g0213 a0001c0001t0017g0054 a0001c0001t0022g0287 a0001c0002t0001g0131 a0001c0002t0001g0139 a0001c0002t0001g0146 a0001c0002t0001g0151 a0001c0002t0001g0154 a0001c0002t0003g0174 a0001c0002t0004g0123 a0001c0002t0004g0127 a0001c0002t0004g0137 a0001c0002t0004g0145 a0001c0002t0004g0149 a0001c0002t0004g0159 a0001c0002t0004g0168 a0001c0002t0004g0169 a0001c0002t0014g0167 a0001c0003t0001g0007 a0001c0009t0007g0310 a0002c0004t0002g0217 a0002c0004t0007g0218 a0002c0004t0007g0221 a0003c0005t0002g0190 a0005c0017t0004g0183 a0006c0014t0004g0182 a0007c0007t0007g0307 a0008c0011t0004g0046 a0009c0010t0007g0234	71	324	0.2191	-19	c.28 others(30): Show c.2852_*2870delCGATTACCTCCCCAGAGGC	TCERG1L	ENSG00000176769.9	transcript	ENST00000368642.4	protein_coding		2099		chr10	TogoVar
TCERG1L_chr10_131087391_131316721	131217708	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00609.hp1 HG00642.hp2 others(27): Show HG00140.hp1 HG00609.hp1 HG00642.hp2 HG01081.hp2 HG01123.hp2 HG01433.hp1 HG01978.hp1 HG02055.hp2 HG02080.hp2 HG02129.hp2 HG02165.hp1 HG02523.hp1 HG02735.hp1 HG03239.hp1 HG03927.hp2 HG04115.hp2 HG04204.hp1 NA18612.hp2 NA18942.hp2 NA18946.hp2 NA18979.hp1 NA18981.hp2 NA18999.hp2 NA19005.hp1 NA19009.hp1 NA19011.hp2 NA19057.hp2 NA19090.hp1 NA20752.hp1 NA20805.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0001c0002 a0009c0010 a0001c0001 a0001c0002 a0009c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0011 a0001c0002t0001 a0001c0002t0003 a0001c0002t0006 a0009c0010t0007	a0001c0001t0001g0065 a0001c0001t0001g0094 a0001c0001t0002g0233 others(27): Show a0001c0001t0001g0065 a0001c0001t0001g0094 a0001c0001t0002g0233 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0252 a0001c0001t0002g0258 a0001c0001t0003g0017 a0001c0001t0003g0035 a0001c0001t0003g0037 a0001c0001t0003g0060 a0001c0001t0003g0114 a0001c0001t0004g0040 a0001c0001t0005g0211 a0001c0001t0005g0238 a0001c0001t0005g0246 a0001c0001t0005g0297 a0001c0001t0005g0308 a0001c0001t0009g0254 a0001c0001t0009g0262 a0001c0001t0009g0267 a0001c0001t0011g0189 a0001c0002t0001g0124 a0001c0002t0001g0131 a0001c0002t0001g0141 a0001c0002t0003g0174 a0001c0002t0006g0164 a0001c0002t0006g0165 a0001c0002t0006g0171 a0009c0010t0007g0234	30	324	0.0926	-19	c.856 others(38): Show c.856+42532_856+42550delAAAAAAAAAAAAAAAAAAA	TCERG1L	ENSG00000176769.9	transcript	ENST00000368642.4	protein_coding	4/11			chr10	TogoVar
TCERG1L_chr10_131087391_131316721	131291397	ATTTCTTT others(12): Show ATTTCTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA19077.hp1 NA18955.hp1 NA19077.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0003 a0001c0003t0003g0004 a0001c0003t0003g0003 a0001c0003t0003g0004	2	324	0.0062	-19	c.670 others(38): Show c.670+16795_670+16813delAAAAAAAAAAAAAAAGAAA	TCERG1L	ENSG00000176769.9	transcript	ENST00000368642.4	protein_coding	3/11			chr10	TogoVar
TCERG1L_chr10_131087391_131316721	131291401	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02922.hp1 HG02976.hp2 others(2): Show HG01884.hp2 HG02922.hp1 HG02976.hp2 HG03209.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0002t0004	a0001c0001t0001g0066 a0001c0001t0002g0269 a0001c0001t0004g0081 others(2): Show a0001c0001t0001g0066 a0001c0001t0002g0269 a0001c0001t0004g0081 a0001c0001t0007g0285 a0001c0002t0004g0159	5	324	0.0154	-19	c.670 others(38): Show c.670+16791_670+16809delAAAAAAAAAAAAAAAAAAA	TCERG1L	ENSG00000176769.9	transcript	ENST00000368642.4	protein_coding	3/11			chr10	TogoVar
TCF12_chr15_56913644_57294853	56998322	TAGCACGT others(12): Show TAGCACGTGGTTGTAGTCCC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0050	1	330	0.0030	-19	c.149 others(38): Show c.149-65424_149-65406delACGTGGTTGTAGTCCCAGC	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57007754	CCTTCTTT others(12): Show CCTTCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01928.hp1 NA18978.hp1 HG00099.hp2 HG01928.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0025 a0001c0001t0033 a0001c0001t0002 a0001c0001t0025 a0001c0001t0033	a0001c0001t0002g0234 a0001c0001t0025g0248 a0001c0001t0033g0315 a0001c0001t0002g0234 a0001c0001t0025g0248 a0001c0001t0033g0315	3	330	0.0091	-19	c.149 others(38): Show c.149-55992_149-55974delCTTTCTTTCTTTCTTTCTT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57136958	GTTTTTTT others(12): Show GTTTTTTTTTTTGTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG01993.hp1 HG03942.hp1 HG01975.hp1 HG01993.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078	3	330	0.0091	-19	c.326 others(38): Show c.326-29432_326-29414delGTTTTTTTTTTTTTTTTTT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	5/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57170733	ATATAATA others(12): Show ATATAATATATATTATATAT	A A	intron_variant intron_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0108 a0001c0001t0013g0108	1	330	0.0030	-19	c.390 others(36): Show c.390+4272_390+4290delATATATATTATATATTATA	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	6/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57233035	ATATGTTA others(12): Show ATATGTTATATATGTATATG	A A	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0229 a0001c0001t0003g0229	1	330	0.0030	-19	c.970 others(34): Show c.970+181_970+199delATGTTATATATGTATATGT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF4_chr18_55217185_55593192	55586178	AGCAGCAG others(12): Show AGCAGCAGCAGCAGCAGCAG	A A	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	1	122	0.0082	-19	c.73- others(32): Show c.73-845_73-827delCTGCTGCTGCTGCTGCTGC	TCF4	ENSG00000196628.20	transcript	ENST00000354452.8	protein_coding	2/19			chr18	TogoVar
TCF7L1_chr2_85128392_85315387	85142433	TGTGTGTG others(12): Show TGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02451.hp2 HG02886.hp1 others(4): Show HG01109.hp1 HG02451.hp2 HG02886.hp1 HG02895.hp2 HG03139.hp1 NA19043.hp2 NA20129.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0013	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0013c0009	a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 others(3): Show a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0012 a0003c0003t0002 a0013c0009t0001	a0001c0001t0002g0067 a0002c0002t0001g0089 a0002c0002t0002g0016 others(4): Show a0001c0001t0002g0067 a0002c0002t0001g0089 a0002c0002t0002g0016 a0002c0002t0002g0018 a0002c0002t0012g0021 a0003c0003t0002g0082 a0013c0009t0001g0019	7	236	0.0297	-19	c.441 others(36): Show c.441+7984_441+8002delGTGTGTGTGTGTGTGTGTG	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	3/11			chr2	TogoVar
TCF7L2_chr10_112945247_113172678	113102111	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19070.hp1 NA19070.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0162 a0002c0002t0003g0162	1	200	0.0050	-19	c.553 others(38): Show c.553-39060_553-39042delAAAAAAAAAAAAAAAAAAA	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCFL5_chr20_62836005_62866822	62855464	TCCCTTTA others(12): Show TCCCTTTAAAAGAAATTGCC	T T	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0135	1	390	0.0026	-19	c.123 others(38): Show c.1239-1326_1239-1308delGGCAATTTCTTTTAAAGGG	TCFL5	ENSG00000101190.13	transcript	ENST00000335351.8	protein_coding	4/5			chr20	TogoVar
TCP11L2_chr12_106297733_106352003	106302403	GCTCAGCC others(12): Show GCTCAGCCCCCGCTCCCCCA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0079 a0002c0002t0001g0079	1	344	0.0029	-19	c.-57 others(28): Show c.-573_-555delCTCAGCCCCCGCTCCCCCA	TCP11L2	ENSG00000166046.11	transcript	ENST00000299045.8	protein_coding		329		chr12	TogoVar

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