Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ZNF808_chr19_52522668_52561336	52523853	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01943.hp2 HG02055.hp2 HG03130.hp1 others(3): Show HG01943.hp2 HG02055.hp2 HG03130.hp1 HG03490.hp2 HG03492.hp1 NA20905.hp1	a0001 a0003 a0022 a0001 a0003 a0022	a0001c0001 a0003c0003 a0022c0017 a0001c0001 a0003c0003 a0022c0017	a0001c0001t0001 a0001c0001t0002 a0003c0003t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0003c0003t0002 a0022c0017t0002	a0001c0001t0001g0338 a0001c0001t0001g0340 a0001c0001t0002g0294 others(3): Show a0001c0001t0001g0338 a0001c0001t0001g0340 a0001c0001t0002g0294 a0001c0001t0002g0295 a0003c0003t0002g0314 a0022c0017t0002g0311	6	424	0.0142	-19	c.-39 others(30): Show c.-3979_-3961delAAAAAAAAAAAAAAAAAAA	ZNF808	ENSG00000198482.14	transcript	ENST00000359798.9	protein_coding		3814		chr19	TogoVar
ZNF80_chr3_114229631_114242578	114242163	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG01516.hp1 HG03017.hp1 HG01256.hp1 HG01516.hp1 HG03017.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0006 a0001c0004t0004 a0001c0004t0006	a0001c0004t0004g0000 a0001c0004t0006g0000 a0001c0004t0004g0000 a0001c0004t0006g0000	3	426	0.0070	-19	c.-51 others(30): Show c.-5108_-5090delAAAAAAAAAAAAAAAAAAA	ZNF80	ENSG00000174255.8	transcript	ENST00000482457.4	protein_coding		4586		chr3	TogoVar
ZNF814_chr19_57864381_57894037	57875943	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02109.hp2 HG02145.hp1 others(11): Show HG01891.hp2 HG02109.hp2 HG02145.hp1 HG02258.hp1 HG02486.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02896.hp1 HG02970.hp1 HG02976.hp2 HG03195.hp2 NA18522.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0015 a0001c0001t0049 a0001c0001t0005 a0001c0001t0015 a0001c0001t0049	a0001c0001t0005g0005 a0001c0001t0005g0069 a0001c0001t0005g0071 others(5): Show a0001c0001t0005g0005 a0001c0001t0005g0069 a0001c0001t0005g0071 a0001c0001t0005g0075 a0001c0001t0015g0070 a0001c0001t0015g0076 a0001c0001t0015g0080 a0001c0001t0049g0079	14	434	0.0323	-19	c.164 others(34): Show c.164-736_164-718delAAAAAAAAAAAAAAAAAAA	ZNF814	ENSG00000204514.11	transcript	ENST00000435989.7	protein_coding	2/2			chr19	TogoVar
ZNF837_chr19_58362623_58386030	58376554	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0001 a0005c0007t0001	a0005c0007t0001g0097 a0005c0007t0001g0097	1	412	0.0024	-19	c.-14 others(38): Show c.-140+4368_-140+4386delTTTTTTTTTTTTTTTTTTT	ZNF837	ENSG00000152475.7	transcript	ENST00000597582.2	protein_coding	1/2			chr19	TogoVar
ZNF839_chr14_102314746_102347367	102328370	AAAAAAAT others(12): Show AAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0006 a0006	a0006c0025 a0006c0025	a0006c0025t0003 a0006c0025t0003	a0006c0025t0003g0190 a0006c0025t0003g0190	1	410	0.0024	-19	c.119 others(38): Show c.1191+1485_1191+1503delAAAAATATATATATATATA	ZNF839	ENSG00000022976.16	transcript	ENST00000442396.7	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr14	TogoVar
ZNF839_chr14_102314746_102347367	102328372	AAAAATAT others(12): Show AAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01496.hp2 HG02055.hp1 others(10): Show HG01433.hp1 HG01496.hp2 HG02055.hp1 HG02055.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02922.hp1 HG02965.hp1 HG03130.hp1 HG03516.hp1	a0003 a0006 a0007 others(1): Show a0003 a0006 a0007 a0025	a0003c0004 a0006c0013 a0007c0011 others(1): Show a0003c0004 a0006c0013 a0007c0011 a0025c0026	a0003c0004t0001 a0006c0013t0003 a0007c0011t0001 others(1): Show a0003c0004t0001 a0006c0013t0003 a0007c0011t0001 a0025c0026t0001	a0003c0004t0001g0031 a0003c0004t0001g0033 a0003c0004t0001g0051 others(8): Show a0003c0004t0001g0031 a0003c0004t0001g0033 a0003c0004t0001g0051 a0003c0004t0001g0177 a0003c0004t0001g0178 a0003c0004t0001g0179 a0006c0013t0003g0172 a0006c0013t0003g0180 a0007c0011t0001g0315 a0007c0011t0001g0316 a0025c0026t0001g0181	13	410	0.0317	-19	c.119 others(38): Show c.1191+1487_1191+1505delAAATATATATATATATATA	ZNF839	ENSG00000022976.16	transcript	ENST00000442396.7	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr14	TogoVar
ZNF839_chr14_102314746_102347367	102328374	AAATATAT others(12): Show AAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG03225.hp1 others(4): Show HG01167.hp2 HG01169.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp2 HG06807.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0030 a0003c0004t0001g0050 a0003c0004t0001g0173 others(3): Show a0003c0004t0001g0030 a0003c0004t0001g0050 a0003c0004t0001g0173 a0003c0004t0001g0174 a0003c0004t0001g0175 a0003c0004t0001g0176	7	410	0.0171	-19	c.119 others(38): Show c.1191+1489_1191+1507delATATATATATATATATATA	ZNF839	ENSG00000022976.16	transcript	ENST00000442396.7	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr14	TogoVar
ZNF841_chr19_52059465_52100765	52064353	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01074.hp1 others(19): Show HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01243.hp2 HG01496.hp2 HG01884.hp2 HG02109.hp2 HG02258.hp2 HG02622.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03130.hp2 HG03471.hp2 HG03579.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0136 a0001c0001t0001g0148 a0001c0003t0002g0023 others(15): Show a0001c0001t0001g0136 a0001c0001t0001g0148 a0001c0003t0002g0023 a0001c0003t0002g0024 a0001c0003t0002g0025 a0001c0003t0002g0049 a0001c0003t0002g0052 a0001c0003t0002g0053 a0001c0003t0002g0054 a0001c0003t0002g0055 a0001c0003t0002g0056 a0001c0003t0002g0057 a0001c0003t0002g0058 a0001c0003t0002g0059 a0001c0003t0002g0060 a0001c0003t0002g0061 a0001c0003t0002g0062 a0001c0003t0002g0063	22	368	0.0598	-19	c.73 others(28): Show c.735_*753delTTTTTTTTTTTTTTTTTTT	ZNF841	ENSG00000197608.12	transcript	ENST00000594440.6	protein_coding		111		chr19	TogoVar
ZNF84_chr12_133032509_133068299	133046347	GTTTTTTT others(12): Show GTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00544.hp1 HG00639.hp1 others(12): Show HG00099.hp1 HG00544.hp1 HG00639.hp1 HG00642.hp1 HG01123.hp2 HG01515.hp1 HG01517.hp1 HG02738.hp2 HG02818.hp1 HG03516.hp2 HG04199.hp1 NA18747.hp1 NA18747.hp2 NA19074.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0012 a0001c0001t0021 a0001c0002t0038	a0001c0001t0001g0010 a0001c0001t0001g0051 a0001c0001t0001g0062 others(9): Show a0001c0001t0001g0010 a0001c0001t0001g0051 a0001c0001t0001g0062 a0001c0001t0004g0076 a0001c0001t0007g0010 a0001c0001t0007g0057 a0001c0001t0012g0020 a0001c0001t0012g0125 a0001c0001t0012g0126 a0001c0001t0012g0128 a0001c0001t0021g0020 a0001c0002t0038g0085	15	318	0.0472	-19	c.16- others(34): Show c.16-1590_16-1572delTTTTTTTTTTTTTTTTTTT	ZNF84	ENSG00000198040.11	transcript	ENST00000539354.6	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr12	TogoVar
ZNF850_chr19_36738480_36777807	36770703	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18994.hp2 NA20300.hp1 NA18978.hp1 NA18994.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0026 a0001c0003t0002 a0001c0003t0015 a0001c0001t0026 a0001c0003t0002 a0001c0003t0015	a0001c0001t0026g0267 a0001c0003t0002g0344 a0001c0003t0015g0348 a0001c0001t0026g0267 a0001c0003t0002g0344 a0001c0003t0015g0348	3	400	0.0075	-19	c.-70 others(36): Show c.-70+2003_-70+2021delTTTTTTTTTTTTTTTTTTT	ZNF850	ENSG00000267041.6	transcript	ENST00000591344.2	protein_coding	1/4			chr19	TogoVar
ZNF865_chr19_55600647_55622269	55620124	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG01109.hp1 HG01891.hp2 others(8): Show HG00408.hp1 HG01109.hp1 HG01891.hp2 HG02145.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0028	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0004t0001 a0001c0006t0001 a0001c0028t0001	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0117 others(6): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0117 a0001c0001t0004g0042 a0001c0002t0001g0003 a0001c0004t0001g0061 a0001c0004t0001g0130 a0001c0006t0001g0057 a0001c0028t0001g0104	11	430	0.0256	-19	c.33 others(30): Show c.3327_*3345delAAAAAAAAAAAAAAAAAAA	ZNF865	ENSG00000261221.5	transcript	ENST00000568956.2	protein_coding		2856		chr19	TogoVar
ZNF879_chr5_179018804_179040064	179037728	CTGGCTTG others(12): Show CTGGCTTGGGCTACTCCATG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0080 a0001c0001t0002g0080	1	456	0.0022	-19	c.40 others(30): Show c.4089_*4107delTGGCTTGGGCTACTCCATG	ZNF879	ENSG00000234284.7	transcript	ENST00000444149.7	protein_coding		2665		chr5	TogoVar
ZNF883_chr9_112983129_113017192	112994288	CTGCTTTT others(12): Show CTGCTTTTCCTCACTCTCCG	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01928.hp1 HG01928.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0064 a0001c0001t0064	a0001c0001t0064g0094 a0001c0001t0064g0094	1	446	0.0022	-19	c.28 others(30): Show c.2813_*2831delCGGAGAGTGAGGAAAAGCA	ZNF883	ENSG00000228623.9	transcript	ENST00000639662.2	protein_coding	5/5	2813		chr9	TogoVar
ZNF888_chr19_52899415_52928428	52915449	GATTCTTC others(12): Show GATTCTTCACCACATGATGT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02622.hp2 HG01891.hp2 HG02622.hp2	a0002 a0011 a0002 a0011	a0002c0026 a0011c0027 a0002c0026 a0011c0027	a0002c0026t0011 a0011c0027t0011 a0002c0026t0011 a0011c0027t0011	a0002c0026t0011g0129 a0011c0027t0011g0128 a0002c0026t0011g0129 a0011c0027t0011g0128	2	426	0.0047	-19	c.16- others(32): Show c.16-146_16-128delACATCATGTGGTGAAGAAT	ZNF888	ENSG00000213793.6	transcript	ENST00000638862.2	protein_coding	3/4			chr19	TogoVar
ZNF91_chr19_23352696_23400471	23380266	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0081 a0001c0002t0013g0081	1	366	0.0027	-19	c.31- others(34): Show c.31-5521_31-5503delTTTTTTTTTTTTTTTTTTT	ZNF91	ENSG00000167232.14	transcript	ENST00000300619.12	protein_coding	1/3			chr19	TogoVar
ZNRF2_chr7_30279597_30372689	30316302	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	NA18942.hp2 NA18942.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0008 a0003c0003t0008	a0003c0003t0008g0001 a0003c0003t0008g0001	1	208	0.0048	-19	c.470 others(36): Show c.470-7337_470-7319delAAAAAAAAAAAAAAAAGAA	ZNRF2	ENSG00000180233.11	transcript	ENST00000323037.5	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZNRF3_chr22_28878572_29062488	28883239	CGAGGACG others(12): Show CGAGGACGAAGGGGCGGAGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0053 a0001c0004t0001g0053	1	270	0.0037	-19	c.-52 others(28): Show c.-527_-509delGAGGACGAAGGGGCGGAGT	ZNRF3	ENSG00000183579.16	transcript	ENST00000544604.7	protein_coding		332		chr22	TogoVar
ZNRF3_chr22_28878572_29062488	28937199	ATATATAT others(12): Show ATATATATATATATATATTT	A A	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0237 a0001c0001t0008g0237	1	270	0.0037	-19	c.301 others(38): Show c.301-49875_301-49857delATATATATATATATATTTT	ZNRF3	ENSG00000183579.16	transcript	ENST00000544604.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr22	TogoVar
ZNRF3_chr22_28878572_29062488	28937203	ATATATAT others(12): Show ATATATATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0038	a0001c0001t0038g0018 a0001c0001t0038g0018	1	270	0.0037	-19	c.301 others(38): Show c.301-49871_301-49853delATATATATATATTTTTTTT	ZNRF3	ENSG00000183579.16	transcript	ENST00000544604.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr22	TogoVar
ZNRF3_chr22_28878572_29062488	28937207	ATATATAT others(12): Show ATATATATATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0258 a0001c0001t0004g0258	1	270	0.0037	-19	c.301 others(38): Show c.301-49867_301-49849delATATATATTTTTTTTTTTT	ZNRF3	ENSG00000183579.16	transcript	ENST00000544604.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr22	TogoVar
ZP3_chr7_76419950_76447069	76436030	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG03540.hp1 NA18982.hp2 others(1): Show HG02895.hp1 HG03540.hp1 NA18982.hp2 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0001t0001	a0001c0002t0001g0239 a0001c0003t0001g0160 a0002c0001t0001g0126 others(1): Show a0001c0002t0001g0239 a0001c0003t0001g0160 a0002c0001t0001g0126 a0002c0001t0001g0279	4	424	0.0094	-19	c.831 others(36): Show c.831+1902_831+1920delTTTTTTTTTTTTTTTTTTT	ZP3	ENSG00000188372.15	transcript	ENST00000394857.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZPBP_chr7_49932441_50098246	49970466	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0016	1	278	0.0036	-19	c.961 others(38): Show c.961+12857_961+12875delAAAAAAAAAAAAAAAAAAA	ZPBP	ENSG00000042813.8	transcript	ENST00000046087.7	protein_coding	7/7			chr7	TogoVar
ZPR1_chr11_116768799_116793023	116775627	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0062 a0001c0001t0062	a0001c0001t0062g0112 a0001c0001t0062g0112	1	460	0.0022	-19	c.32 others(30): Show c.3279_*3297delTTTTTTTTTTTTTTTTTTT	ZPR1	ENSG00000109917.11	transcript	ENST00000227322.8	protein_coding	14/14	3279		chr11	TogoVar
ZRANB1_chr10_124937123_124993189	124982018	GAGCATCG others(12): Show GAGCATCGCAAGTATAGATT	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0026 a0001c0003t0026	a0001c0003t0026g0015 a0001c0003t0026g0319 a0001c0003t0026g0015 a0001c0003t0026g0319	3	338	0.0089	-19	c.154 others(36): Show c.1548+202_1548+220delATAGATTAGCATCGCAAGT	ZRANB1	ENSG00000019995.6	transcript	ENST00000359653.4	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr10	TogoVar
ZRANB3_chr2_135191969_135536218	135426856	AAAAAAAA others(12): Show AAAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0208 a0002c0002t0002g0208	1	214	0.0047	-19	c.162 others(38): Show c.162-36055_162-36037delATATATATATATTTTTTTT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZRANB3_chr2_135191969_135536218	135426858	AAAAAAAT others(12): Show AAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0022 a0002c0002t0006g0022	1	214	0.0047	-19	c.162 others(38): Show c.162-36057_162-36039delATATATATATATATTTTTT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZRANB3_chr2_135191969_135536218	135426862	AAATATAT others(12): Show AAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04199.hp1 NA18952.hp2 HG04199.hp1 NA18952.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0006 a0002c0002t0002 a0002c0002t0006	a0002c0002t0002g0204 a0002c0002t0006g0010 a0002c0002t0002g0204 a0002c0002t0006g0010	2	214	0.0094	-19	c.162 others(38): Show c.162-36061_162-36043delATATATATATATATATATT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZRANB3_chr2_135191969_135536218	135493097	AAATATAT others(12): Show AAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0136 a0001c0001t0005g0136	1	214	0.0047	-19	c.161 others(38): Show c.161+11213_161+11231delATATATATATATATATATT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZRANB3_chr2_135191969_135536218	135532578	TCTTCATG others(12): Show TCTTCATGGTTATAGTTTAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0086 a0001c0001t0019g0086	1	214	0.0047	-19	c.-14 others(30): Show c.-1478_-1460delGTAAACTATAACCATGAAG	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding		1361		chr2	TogoVar
ZSCAN18_chr19_58078856_58103231	58089302	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02280.hp1 HG02572.hp2 others(6): Show HG02257.hp1 HG02280.hp1 HG02572.hp2 HG02886.hp1 HG02965.hp2 HG03195.hp2 HG03654.hp2 HG04184.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0003 a0001c0006t0001 a0001c0001t0003 a0001c0006t0001	a0001c0001t0003g0029 a0001c0001t0003g0096 a0001c0001t0003g0097 others(5): Show a0001c0001t0003g0029 a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0100 a0001c0001t0003g0120 a0001c0006t0001g0138 a0001c0006t0001g0315	9	462	0.0195	-19	c.404 others(34): Show c.404-484_404-466delTTTTTTTTTTTTTTTTTTT	ZSCAN18	ENSG00000121413.13	transcript	ENST00000601144.6	protein_coding	2/6			chr19	TogoVar
ZSCAN5A_chr19_56216303_56319839	56243094	TATTATTT others(12): Show TATTATTTCACTTCCTGAAA	T T	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0330 a0001c0001t0001g0330	1	362	0.0028	-19	c.-12 others(40): Show c.-127-17940_-127-17922delTTTCAGGAAGTGAAATAAT	ZSCAN5A	ENSG00000131848.10	transcript	ENST00000683990.1	protein_coding	2/5			chr19	TogoVar
ZSWIM4_chr19_13790443_13837254	13800240	ATTTCTTT others(12): Show ATTTCTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02280.hp2 HG02630.hp2 others(9): Show HG02109.hp2 HG02280.hp2 HG02630.hp2 HG02647.hp2 HG02723.hp1 HG02965.hp2 HG03139.hp2 HG03579.hp1 NA18522.hp1 NA19043.hp1 NA19240.hp2 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0005 a0003c0006 a0003c0012 a0001c0005 a0003c0006 a0003c0012	a0001c0005t0002 a0003c0006t0002 a0003c0006t0005 others(3): Show a0001c0005t0002 a0003c0006t0002 a0003c0006t0005 a0003c0006t0012 a0003c0006t0024 a0003c0012t0018	a0001c0005t0002g0333 a0001c0005t0002g0335 a0003c0006t0002g0110 others(9): Show a0001c0005t0002g0333 a0001c0005t0002g0335 a0003c0006t0002g0110 a0003c0006t0002g0112 a0003c0006t0002g0118 a0003c0006t0005g0111 a0003c0006t0012g0113 a0003c0006t0012g0114 a0003c0006t0012g0116 a0003c0006t0024g0109 a0003c0012t0018g0115 a0003c0012t0018g0117	12	356	0.0337	-19	c.355 others(34): Show c.355+323_355+341delCTTTTTTTTTTTTTTTTTT	ZSWIM4	ENSG00000132003.10	transcript	ENST00000590508.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZSWIM4_chr19_13790443_13837254	13800244	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG00438.hp2 others(78): Show HG00323.hp2 HG00408.hp2 HG00438.hp2 HG00733.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01256.hp2 HG01346.hp2 HG01433.hp2 HG01884.hp1 HG01891.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp2 HG02080.hp2 HG02135.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02486.hp1 HG02559.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp2 HG02717.hp2 HG02886.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03490.hp2 HG03540.hp2 HG03654.hp2 HG03942.hp2 HG04115.hp1 HG04228.hp2 HG06807.hp2 NA18946.hp1 NA18950.hp2 NA18955.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp2 NA18966.hp2 NA18977.hp2 NA18980.hp2 NA18983.hp1 NA18999.hp2 NA19000.hp2 NA19005.hp2 NA19007.hp2 NA19010.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp2 NA19056.hp1 NA19070.hp1 NA19070.hp2 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19084.hp2 NA19088.hp1 NA19240.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0006 a0011 a0014	a0001c0001 a0001c0002 a0001c0017 others(12): Show a0001c0001 a0001c0002 a0001c0017 a0001c0018 a0001c0020 a0002c0003 a0002c0004 a0002c0015 a0002c0019 a0002c0032 a0004c0008 a0004c0011 a0006c0014 a0011c0024 a0014c0025	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(36): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0028 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0009 a0001c0002t0017 a0001c0002t0027 a0001c0002t0029 a0001c0017t0002 a0001c0018t0009 a0001c0020t0003 a0002c0003t0001 a0002c0003t0002 a0002c0003t0004 a0002c0003t0005 a0002c0003t0008 a0002c0003t0021 a0002c0003t0022 a0002c0004t0002 a0002c0004t0006 a0002c0015t0006 a0002c0019t0032 a0002c0032t0002 a0004c0008t0003 a0004c0011t0015 a0006c0014t0010 a0006c0014t0011 a0011c0024t0003 a0014c0025t0001	a0001c0001t0001g0078 a0001c0001t0001g0107 a0001c0001t0001g0108 others(78): Show a0001c0001t0001g0078 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0002g0326 a0001c0001t0005g0094 a0001c0001t0009g0069 a0001c0001t0010g0004 a0001c0001t0010g0026 a0001c0001t0010g0028 a0001c0001t0011g0004 a0001c0001t0011g0027 a0001c0001t0011g0029 a0001c0001t0028g0025 a0001c0002t0001g0044 a0001c0002t0001g0045 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0002g0049 a0001c0002t0003g0058 a0001c0002t0004g0031 a0001c0002t0004g0059 a0001c0002t0004g0062 a0001c0002t0004g0063 a0001c0002t0004g0066 a0001c0002t0005g0047 a0001c0002t0005g0048 a0001c0002t0005g0051 a0001c0002t0005g0052 a0001c0002t0005g0053 a0001c0002t0005g0054 a0001c0002t0006g0064 a0001c0002t0008g0011 a0001c0002t0008g0057 a0001c0002t0009g0099 a0001c0002t0009g0106 a0001c0002t0017g0030 a0001c0002t0027g0105 a0001c0002t0029g0065 a0001c0017t0002g0055 a0001c0018t0009g0098 a0001c0020t0003g0321 a0002c0003t0001g0003 a0002c0003t0001g0120 a0002c0003t0001g0122 a0002c0003t0001g0336 a0002c0003t0002g0070 a0002c0003t0004g0081 a0002c0003t0004g0082 a0002c0003t0005g0104 a0002c0003t0008g0003 a0002c0003t0008g0016 a0002c0003t0008g0017 a0002c0003t0008g0018 a0002c0003t0021g0093 a0002c0003t0022g0084 a0002c0004t0002g0071 a0002c0004t0002g0072 a0002c0004t0002g0074 a0002c0004t0002g0075 a0002c0004t0002g0079 a0002c0004t0002g0080 a0002c0004t0002g0083 a0002c0004t0002g0085 a0002c0004t0002g0086 a0002c0004t0002g0092 a0002c0004t0002g0324 a0002c0004t0002g0325 a0002c0004t0006g0091 a0002c0015t0006g0077 a0002c0015t0006g0090 a0002c0019t0032g0046 a0002c0032t0002g0076 a0004c0008t0003g0096 a0004c0008t0003g0097 a0004c0008t0003g0103 a0004c0011t0015g0101 a0004c0011t0015g0102 a0006c0014t0010g0089 a0006c0014t0011g0073 a0011c0024t0003g0121 a0014c0025t0001g0088	81	356	0.2275	-19	c.355 others(34): Show c.355+344_355+362delTTTTTTTTTTTTTTTTTTT	ZSWIM4	ENSG00000132003.10	transcript	ENST00000590508.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZSWIM7_chr17_15971560_16004704	15976128	TATATATA others(12): Show TATATATATATATAAATAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 NA18906.hp1 HG01891.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0026 a0001c0001t0009g0026	2	344	0.0058	-19	c.19 others(30): Show c.1900_*1918delTTTATTTATATATATATAT	ZSWIM7	ENSG00000214941.8	transcript	ENST00000399277.6	protein_coding		431		chr17	TogoVar
ZYG11A_chr1_52837760_52899998	52846348	ATATATAT others(12): Show ATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0010 a0003c0003t0010	a0003c0003t0010g0081 a0003c0003t0010g0081	1	290	0.0035	-19	c.90+ others(34): Show c.90+3377_90+3395delATATATATATATATATATT	ZYG11A	ENSG00000203995.11	transcript	ENST00000371528.2	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52773615	ATATATAT others(12): Show ATATATATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0152 a0001c0001t0011g0152	1	352	0.0028	-19	c.951 others(36): Show c.951+1843_951+1861delATATATATATATTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817809	ATATATAT others(12): Show ATATATATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0154 a0001c0001t0060g0154	1	352	0.0028	-19	c.204 others(38): Show c.2044+1182_2044+1200delATATATTTTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817811	ATATATTT others(12): Show ATATATTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0152 a0001c0001t0011g0152	1	352	0.0028	-19	c.204 others(38): Show c.2044+1184_2044+1202delATATTTTTTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817813	ATATTTTT others(12): Show ATATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA19056.hp2 NA18959.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0119 a0001c0001t0001g0045 a0001c0001t0001g0119	2	352	0.0057	-19	c.204 others(38): Show c.2044+1186_2044+1204delATTTTTTTTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817815	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 NA18998.hp2 HG00642.hp1 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0083 a0001c0001t0011g0126 a0001c0001t0001g0083 a0001c0001t0011g0126	2	352	0.0057	-19	c.204 others(38): Show c.2044+1208_2044+1226delTTTTTTTTTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZZEF1_chr17_3999445_4148030	4112032	AAATATAT others(12): Show AAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0008 a0008	a0008c0007 a0008c0007	a0008c0007t0002 a0008c0007t0002	a0008c0007t0002g0122 a0008c0007t0002g0122	1	296	0.0034	-19	c.106 others(36): Show c.1066+558_1066+576delATATATATATATATATATT	ZZEF1	ENSG00000074755.15	transcript	ENST00000381638.7	protein_coding	5/54			chr17	TogoVar

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