Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LOC400499_chr16_11367015_11532247	11492297	CCCATCCA others(12): Show CCCATCCACCCACCCATCAT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG00735.hp2 others(56): Show HG00408.hp1 HG00597.hp1 HG00735.hp2 HG01081.hp2 HG01106.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp2 HG01257.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG02015.hp1 HG02135.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02300.hp2 HG02451.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02723.hp1 HG02735.hp1 HG02886.hp2 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03098.hp2 HG03139.hp1 HG03209.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03579.hp1 HG03927.hp2 HG04115.hp1 HG04228.hp2 NA18906.hp2 NA18956.hp1 NA18964.hp2 NA18977.hp1 NA18985.hp1 NA18986.hp1 NA18995.hp1 NA19030.hp2 NA19043.hp2 NA19065.hp1 NA19079.hp2 NA19085.hp2 NA19240.hp1 NA20300.hp1	a0001 a0004 a0005 others(49): Show a0001 a0004 a0005 a0013 a0017 a0019 a0025 a0027 a0032 a0042 a0044 a0059 a0060 a0066 a0070 a0074 a0076 a0087 a0096 a0100 a0102 a0104 a0105 a0108 a0112 a0119 a0120 a0123 a0124 a0127 a0141 a0144 a0145 a0146 a0153 a0154 a0157 a0166 a0168 a0171 a0175 a0186 a0189 a0193 a0199 a0211 a0221 a0231 a0234 a0241 a0243 a0245	a0001c0014 a0004c0013 a0005c0129 others(51): Show a0001c0014 a0004c0013 a0005c0129 a0013c0116 a0013c0117 a0017c0015 a0019c0012 a0025c0184 a0025c0185 a0027c0021 a0032c0088 a0042c0048 a0044c0044 a0059c0110 a0060c0107 a0066c0053 a0070c0126 a0074c0115 a0076c0187 a0087c0112 a0096c0131 a0100c0047 a0102c0103 a0104c0035 a0105c0127 a0108c0031 a0112c0180 a0119c0166 a0120c0049 a0123c0113 a0124c0186 a0127c0267 a0141c0183 a0144c0264 a0145c0099 a0146c0182 a0153c0189 a0154c0181 a0157c0114 a0166c0100 a0168c0109 a0171c0165 a0175c0101 a0186c0108 a0189c0050 a0193c0111 a0199c0036 a0211c0125 a0221c0130 a0231c0045 a0234c0236 a0241c0235 a0243c0188 a0245c0132	a0001c0014t0001 a0001c0014t0003 a0004c0013t0001 others(52): Show a0001c0014t0001 a0001c0014t0003 a0004c0013t0001 a0005c0129t0003 a0013c0116t0005 a0013c0117t0001 a0017c0015t0002 a0019c0012t0002 a0025c0184t0004 a0025c0185t0002 a0027c0021t0001 a0032c0088t0001 a0042c0048t0001 a0044c0044t0004 a0059c0110t0003 a0060c0107t0004 a0066c0053t0001 a0070c0126t0005 a0074c0115t0003 a0076c0187t0002 a0087c0112t0002 a0096c0131t0002 a0100c0047t0001 a0102c0103t0003 a0104c0035t0007 a0105c0127t0002 a0108c0031t0006 a0112c0180t0005 a0119c0166t0002 a0120c0049t0002 a0123c0113t0005 a0124c0186t0005 a0127c0267t0003 a0141c0183t0002 a0144c0264t0007 a0145c0099t0001 a0146c0182t0004 a0153c0189t0010 a0154c0181t0006 a0157c0114t0007 a0166c0100t0008 a0168c0109t0003 a0171c0165t0001 a0175c0101t0002 a0186c0108t0001 a0189c0050t0002 a0193c0111t0001 a0199c0036t0002 a0211c0125t0003 a0221c0130t0002 a0231c0045t0004 a0234c0236t0001 a0241c0235t0002 a0243c0188t0005 a0245c0132t0004	a0001c0014t0001g0151 a0001c0014t0003g0123 a0004c0013t0001g0208 others(56): Show a0001c0014t0001g0151 a0001c0014t0003g0123 a0004c0013t0001g0208 a0004c0013t0001g0250 a0005c0129t0003g0209 a0013c0116t0005g0134 a0013c0117t0001g0174 a0017c0015t0002g0063 a0017c0015t0002g0064 a0019c0012t0002g0023 a0019c0012t0002g0025 a0025c0184t0004g0288 a0025c0185t0002g0168 a0027c0021t0001g0033 a0027c0021t0001g0163 a0032c0088t0001g0076 a0042c0048t0001g0270 a0044c0044t0004g0268 a0059c0110t0003g0068 a0060c0107t0004g0115 a0066c0053t0001g0074 a0070c0126t0005g0003 a0074c0115t0003g0024 a0076c0187t0002g0051 a0087c0112t0002g0193 a0096c0131t0002g0263 a0100c0047t0001g0221 a0102c0103t0003g0289 a0104c0035t0007g0032 a0105c0127t0002g0299 a0108c0031t0006g0285 a0112c0180t0005g0148 a0119c0166t0002g0061 a0120c0049t0002g0057 a0123c0113t0005g0014 a0124c0186t0005g0044 a0127c0267t0003g0262 a0141c0183t0002g0058 a0144c0264t0007g0274 a0145c0099t0001g0242 a0146c0182t0004g0286 a0153c0189t0010g0046 a0154c0181t0006g0287 a0157c0114t0007g0167 a0166c0100t0008g0029 a0168c0109t0003g0243 a0171c0165t0001g0001 a0175c0101t0002g0142 a0186c0108t0001g0206 a0189c0050t0002g0194 a0193c0111t0001g0241 a0199c0036t0002g0036 a0211c0125t0003g0237 a0221c0130t0002g0245 a0231c0045t0004g0164 a0234c0236t0001g0105 a0241c0235t0002g0070 a0243c0188t0005g0196 a0245c0132t0004g0062	59	308	0.1916	-19	c.158 others(36): Show c.1585-471_1585-453delATGATGGGTGGGTGGATGG	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	12/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11494060	GGGGCGGG others(12): Show GGGGCGGGGCAGTGGCGTGA	G G	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0232 a0232	a0232c0076 a0232c0076	a0232c0076t0002 a0232c0076t0002	a0232c0076t0002g0135 a0232c0076t0002g0135	1	308	0.0032	-19	c.143 others(36): Show c.1432-283_1432-265delTCACGCCACTGCCCCGCCC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	11/66			chr16	TogoVar
LOXL4_chr10_98242690_98273194	98258591	AGGCATCT others(12): Show AGGCATCTGTACCACCTCAC	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0106 a0001c0004t0001g0106	1	436	0.0023	-19	c.921 others(34): Show c.921+399_921+417delGTGAGGTGGTACAGATGCC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding	6/14			chr10	TogoVar
LOXL4_chr10_98242690_98273194	98271181	GGCCTCGG others(12): Show GGCCTCGGGTAAGTTATTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0149 a0002c0001t0001g0149	1	436	0.0023	-19	c.-31 others(30): Show c.-3101_-3083delAAAATAACTTACCCGAGGC	LOXL4	ENSG00000138131.4	transcript	ENST00000260702.4	protein_coding		2988		chr10	TogoVar
LPAR1_chr9_110868263_111043470	110903914	GCACTGAG others(12): Show GCACTGAGAGAGCAACAACA	G G	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0126	1	300	0.0033	-19	c.794 others(38): Show c.794-28211_794-28193delTGTTGTTGCTCTCTCAGTG	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	5/5			chr9	TogoVar
LPIN2_chr18_2911999_3018144	2958142	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAACAAC	A A	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03130.hp1 HG03041.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0080 a0001c0001t0013 a0001c0001t0080	a0001c0001t0013g0156 a0001c0001t0080g0155 a0001c0001t0013g0156 a0001c0001t0080g0155	2	378	0.0053	-19	c.192 others(36): Show c.192+2488_192+2506delGTTGTTTTTTTTTTTTTTT	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN3_chr20_41335821_41365582	41359079	CTGTCCTG others(12): Show CTGTCCTGGGGCAATTAGCT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18972.hp2 NA19004.hp1 NA19004.hp2 NA18972.hp2 NA19004.hp1 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0035 a0001c0001t0021 a0001c0001t0035	a0001c0001t0021g0012 a0001c0001t0035g0001 a0001c0001t0021g0012 a0001c0001t0035g0001	3	402	0.0075	-19	c.21 others(28): Show c.218_*236delCTGGGGCAATTAGCTTGTC	LPIN3	ENSG00000132793.12	transcript	ENST00000373257.8	protein_coding	20/20	218	INFO_REALIGN_3_PRIME	chr20	TogoVar
LPP_chr3_188149157_188895671	188755809	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02886.hp2 NA20752.hp1 HG00673.hp2 HG02886.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0003 a0001c0001 a0001c0005 a0002c0003	a0001c0001t0056 a0001c0005t0032 a0002c0003t0055 a0001c0001t0056 a0001c0005t0032 a0002c0003t0055	a0001c0001t0056g0006 a0001c0005t0032g0003 a0002c0003t0055g0016 a0001c0001t0056g0006 a0001c0005t0032g0003 a0002c0003t0055g0016	3	33	0.0909	-19	c.124 others(38): Show c.1241-4266_1241-4248delAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188785009	CCATCATA others(12): Show CCATCATATATATATTCCAT	C C	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0062 a0001c0005t0062	a0001c0005t0062g0022 a0001c0005t0062g0022	1	74	0.0135	-19	c.141 others(40): Show c.1410+24750_1410+24768delCATATATATATTCCATCAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150264905	GGTGCCCC others(12): Show GGTGCCCCAACAAAACAACA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0007 a0003c0004t0007	a0003c0004t0007g0161 a0003c0004t0007g0161	1	178	0.0056	-19	c.79 others(28): Show c.798_*816delTGTTGTTTTGTTGGGGCAC	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	57/57	798		chr4	TogoVar
LRBA_chr4_150259435_151020284	150559844	ATAATAAT others(12): Show ATAATAATATATAATTATAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02622.hp2 HG02630.hp2 others(2): Show HG02280.hp1 HG02622.hp2 HG02630.hp2 HG02976.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0001 a0001c0001t0002 a0001c0014t0001 a0001c0001t0001 a0001c0001t0002 a0001c0014t0001	a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0002g0051 others(2): Show a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0002g0051 a0001c0014t0001g0052 a0001c0014t0001g0054	5	178	0.0281	-19	c.633 others(40): Show c.6330+28185_6330+28203delATATAATTATATATTATTA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	40/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150655720	ATTTCACT others(12): Show ATTTCACTCAGGACAGAAAC	A A	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	1	178	0.0056	-19	c.592 others(40): Show c.5921+27812_5921+27830delGTTTCTGTCCTGAGTGAAA	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRCH1_chr13_46548170_46749898	46657500	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02818.hp1 HG02258.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0008 a0001c0001t0001 a0001c0004t0008	a0001c0001t0001g0253 a0001c0004t0008g0233 a0001c0001t0001g0253 a0001c0004t0008g0233	2	24	0.0833	-19	c.452 others(36): Show c.452+7179_452+7197delTTTTTTTTTTTTTTTTTTT	LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
LRCH2_chrX_115105616_115239096	115221199	AAAAAAAA others(12): Show AAAAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0150 a0001c0001t0002g0150	1	235	0.0043	-19	c.349 others(38): Show c.349+12475_349+12493delATATATATTTTTTTTTTTT	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding	1/20			chrX	TogoVar
LRCH3_chr3_197786254_197893436	197886677	CACCTGTA others(12): Show CACCTGTAATCCCAGCTACT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0059 a0001c0004t0059	a0001c0004t0059g0003 a0001c0004t0059g0003	1	290	0.0034	-19	c.30 others(30): Show c.3012_*3030delACCTGTAATCCCAGCTACT	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	21/21	3012		chr3	TogoVar
LRCH4_chr7_100569011_100591129	100570843	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02895.hp1 HG02965.hp2 others(9): Show HG01243.hp1 HG02895.hp1 HG02965.hp2 HG02970.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG06807.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0014 a0003c0005 a0001c0001 a0001c0014 a0003c0005	a0001c0001t0003 a0001c0014t0003 a0003c0005t0003 a0001c0001t0003 a0001c0014t0003 a0003c0005t0003	a0001c0001t0003g0018 a0001c0001t0003g0027 a0001c0001t0003g0167 others(4): Show a0001c0001t0003g0018 a0001c0001t0003g0027 a0001c0001t0003g0167 a0001c0001t0003g0168 a0001c0014t0003g0057 a0003c0005t0003g0030 a0003c0005t0003g0076	12	120	0.1000	-19	c.42 others(30): Show c.4245_*4263delTTTTTTTTTTTTTTTTTTT	LRCH4	ENSG00000077454.17	transcript	ENST00000310300.11	protein_coding		3167		chr7	TogoVar
LRCH4_chr7_100569011_100591129	100580585	CACAGACC others(12): Show CACAGACCTAAACACACACA	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0028 a0001c0007t0028	a0001c0007t0028g0052 a0001c0007t0028g0052	1	368	0.0027	-19	c.598 others(36): Show c.598+1173_598+1191delTGTGTGTGTTTAGGTCTGT	LRCH4	ENSG00000077454.17	transcript	ENST00000310300.11	protein_coding	4/17			chr7	TogoVar
LRFN2_chr6_40386591_40592364	40576309	TTGGAGAG others(12): Show TTGGAGAGAGACAAGACAGA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00735.hp1 HG01169.hp1 others(16): Show HG00280.hp2 HG00735.hp1 HG01169.hp1 HG01978.hp2 HG02155.hp2 HG02809.hp1 HG03130.hp2 HG03225.hp2 HG03486.hp2 NA18522.hp2 NA18983.hp2 NA18993.hp2 NA18995.hp1 NA19004.hp1 NA19054.hp1 NA19056.hp2 NA19070.hp1 NA20300.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0002c0005	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006 a0001c0003t0002 a0001c0004t0001 a0002c0005t0005	a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 others(16): Show a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0024 a0001c0001t0001g0176 a0001c0001t0004g0018 a0001c0002t0001g0008 a0001c0002t0001g0016 a0001c0002t0001g0031 a0001c0002t0002g0169 a0001c0002t0006g0012 a0001c0003t0002g0013 a0001c0003t0002g0032 a0001c0004t0001g0007 a0002c0005t0005g0033 a0002c0005t0005g0034	19	226	0.0841	-19	c.-19 others(38): Show c.-19+10613_-19+10631delTCTGTCTTGTCTCTCTCCA	LRFN2	ENSG00000156564.10	transcript	ENST00000338305.7	protein_coding	1/2			chr6	TogoVar
LRIG1_chr3_66373797_66506022	66443328	AGGGGCGG others(12): Show AGGGGCGGGGGATGAGTGAG	A A	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01346.hp1 HG01515.hp2 others(7): Show HG01167.hp2 HG01346.hp1 HG01515.hp2 HG02148.hp2 HG02622.hp2 HG02735.hp1 HG02886.hp1 HG03669.hp1 HG06807.hp2 NA20805.hp1	a0001 a0007 a0009 a0001 a0007 a0009	a0001c0002 a0007c0006 a0009c0013 a0001c0002 a0007c0006 a0009c0013	a0001c0002t0001 a0001c0002t0031 a0007c0006t0005 others(2): Show a0001c0002t0001 a0001c0002t0031 a0007c0006t0005 a0007c0006t0020 a0009c0013t0004	a0001c0002t0001g0062 a0001c0002t0001g0064 a0001c0002t0001g0069 others(7): Show a0001c0002t0001g0062 a0001c0002t0001g0064 a0001c0002t0001g0069 a0001c0002t0001g0070 a0001c0002t0001g0117 a0001c0002t0001g0150 a0001c0002t0031g0068 a0007c0006t0005g0230 a0007c0006t0020g0005 a0009c0013t0004g0214	10	259	0.0386	-19	c.365 others(36): Show c.365+8212_365+8230delCTCACTCATCCCCCGCCCC	LRIG1	ENSG00000144749.14	transcript	ENST00000273261.8	protein_coding	3/18			chr3	TogoVar
LRMDA_chr10_75426624_76565168	75590726	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03195.hp1 HG02145.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0029 a0001c0002t0003g0030 a0001c0001t0001g0029 a0001c0002t0003g0030	2	11	0.1818	-19	c.131 others(40): Show c.131+152256_131+152274delTTTTTTTTTTTTTTTTTTT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP12_chr8_104484236_104594258	104514400	GATAAAAC others(12): Show GATAAAACAGATAAAACTTA	G G	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0279 a0001c0001t0008g0279	1	316	0.0032	-19	c.137 others(36): Show c.137-5345_137-5327delTAAGTTTTATCTGTTTTAT	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	2/6			chr8	TogoVar
LRP1B_chr2_140226423_142136016	140256449	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0024 a0001c0024	a0001c0024t0005 a0001c0024t0005	a0001c0024t0005g0009 a0001c0024t0005g0009	1	2	0.5000	-19	c.132 others(40): Show c.13248-9306_13248-9288delAAAAAAAAAAAAAAAAAAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	86/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140705521	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01884.hp1 HG01884.hp2 others(5): Show HG01261.hp2 HG01884.hp1 HG01884.hp2 HG02145.hp2 HG02486.hp1 HG02559.hp2 HG02922.hp1 HG03225.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0001c0014 a0001c0015 others(5): Show a0001c0005 a0001c0014 a0001c0015 a0001c0016 a0001c0019 a0001c0025 a0001c0026 a0002c0004	a0001c0005t0008 a0001c0014t0004 a0001c0015t0009 others(5): Show a0001c0005t0008 a0001c0014t0004 a0001c0015t0009 a0001c0016t0001 a0001c0019t0001 a0001c0025t0005 a0001c0026t0001 a0002c0004t0004	a0001c0005t0008g0010 a0001c0014t0004g0001 a0001c0015t0009g0017 others(5): Show a0001c0005t0008g0010 a0001c0014t0004g0001 a0001c0015t0009g0017 a0001c0016t0001g0011 a0001c0019t0001g0016 a0001c0025t0005g0018 a0001c0026t0001g0024 a0002c0004t0004g0006	8	9	0.8889	-19	c.602 others(38): Show c.6024-2987_6024-2969delTTTTTTTTTTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	37/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140970712	ACCTTTTT others(12): Show ACCTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02922.hp1 NA19240.hp2 HG02630.hp1 HG02922.hp1 NA19240.hp2	a0001 a0001	a0001c0005 a0001c0010 a0001c0013 a0001c0005 a0001c0010 a0001c0013	a0001c0005t0008 a0001c0010t0011 a0001c0013t0002 a0001c0005t0008 a0001c0010t0011 a0001c0013t0002	a0001c0005t0008g0010 a0001c0010t0011g0028 a0001c0013t0002g0012 a0001c0005t0008g0010 a0001c0010t0011g0028 a0001c0013t0002g0012	3	12	0.2500	-19	c.288 others(40): Show c.2887+11429_2887+11447delAAAAAAAAAAAAAAAAAGG	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	18/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141743486	CTTTTTTT others(12): Show CTTTTTTTTTTTTTTCTTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02451.hp1 HG02451.hp2 others(4): Show HG02145.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02723.hp1 HG02922.hp1 HG03225.hp2	a0001 a0003 a0001 a0003	a0001c0005 a0001c0011 a0001c0012 others(4): Show a0001c0005 a0001c0011 a0001c0012 a0001c0014 a0001c0018 a0001c0019 a0003c0003	a0001c0005t0008 a0001c0011t0001 a0001c0012t0003 others(4): Show a0001c0005t0008 a0001c0011t0001 a0001c0012t0003 a0001c0014t0004 a0001c0018t0002 a0001c0019t0001 a0003c0003t0002	a0001c0005t0008g0010 a0001c0011t0001g0014 a0001c0012t0003g0005 others(4): Show a0001c0005t0008g0010 a0001c0011t0001g0014 a0001c0012t0003g0005 a0001c0014t0004g0001 a0001c0018t0002g0013 a0001c0019t0001g0016 a0003c0003t0002g0027	7	28	0.2500	-19	c.205 others(38): Show c.205+66774_205+66792delAAAAGAAAAAAAAAAAAAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP2_chr2_169122109_169367534	169231293	CAGAAAGA others(12): Show CAGAAAGAAAAAAAAAAGAA	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01255.hp1 HG01261.hp1 others(7): Show HG01099.hp1 HG01255.hp1 HG01261.hp1 HG01891.hp1 HG02055.hp1 HG02615.hp2 HG02723.hp2 HG03471.hp1 NA18522.hp2 NA19030.hp1	a0003 a0005 a0009 others(3): Show a0003 a0005 a0009 a0031 a0039 a0049	a0003c0016 a0003c0043 a0003c0089 others(6): Show a0003c0016 a0003c0043 a0003c0089 a0005c0115 a0005c0160 a0009c0044 a0031c0161 a0039c0045 a0049c0116	a0003c0016t0004 a0003c0043t0018 a0003c0089t0002 others(6): Show a0003c0016t0004 a0003c0043t0018 a0003c0089t0002 a0005c0115t0008 a0005c0160t0008 a0009c0044t0003 a0031c0161t0016 a0039c0045t0007 a0049c0116t0007	a0003c0016t0004g0018 a0003c0016t0004g0047 a0003c0043t0018g0148 others(7): Show a0003c0016t0004g0018 a0003c0016t0004g0047 a0003c0043t0018g0148 a0003c0089t0002g0137 a0005c0115t0008g0140 a0005c0160t0008g0169 a0009c0044t0003g0147 a0031c0161t0016g0242 a0039c0045t0007g0123 a0049c0116t0007g0149	10	248	0.0403	-19	c.522 others(36): Show c.5227+402_5227+420delTTCTTTTTTTTTTCTTTCT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	31/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169338385	AAAGAAAG others(12): Show AAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA18961.hp1 NA18979.hp1 others(1): Show NA18941.hp2 NA18961.hp1 NA18979.hp1 NA19060.hp2	a0002 a0005 a0006 a0002 a0005 a0006	a0002c0130 a0002c0132 a0005c0131 others(1): Show a0002c0130 a0002c0132 a0005c0131 a0006c0015	a0002c0130t0003 a0002c0132t0003 a0005c0131t0003 others(1): Show a0002c0130t0003 a0002c0132t0003 a0005c0131t0003 a0006c0015t0002	a0002c0130t0003g0179 a0002c0132t0003g0180 a0005c0131t0003g0158 others(1): Show a0002c0130t0003g0179 a0002c0132t0003g0180 a0005c0131t0003g0158 a0006c0015t0002g0186	4	247	0.0162	-19	c.80- others(36): Show c.80-17520_80-17502delCTTTCTTTCTTTCTTTCTT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP5_chr11_68307591_68454275	68443564	TATATATA others(12): Show TATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0179 a0001c0004t0001g0179	1	208	0.0048	-19	c.448 others(38): Show c.4489-2871_4489-2853delATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	21/22			chr11	TogoVar
LRP6_chr12_12111025_12272044	12199964	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02572.hp2 HG02717.hp2 others(1): Show HG02280.hp2 HG02572.hp2 HG02717.hp2 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0008 a0001c0014 a0001c0003 a0001c0008 a0001c0014	a0001c0003t0016 a0001c0008t0032 a0001c0014t0027 a0001c0003t0016 a0001c0008t0032 a0001c0014t0027	a0001c0003t0016g0193 a0001c0003t0016g0194 a0001c0008t0032g0195 others(1): Show a0001c0003t0016g0193 a0001c0003t0016g0194 a0001c0008t0032g0195 a0001c0014t0027g0229	4	10	0.4000	-19	c.647 others(36): Show c.647+3220_647+3238delTTTTTTTTTTTTTTTTTTT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	3/22			chr12	TogoVar
LRP8_chr1_53237364_53333070	53326589	CGGTTCAG others(12): Show CGGTTCAGTCTCCCCAGCAT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01433.hp1 HG02071.hp2 others(13): Show HG01167.hp1 HG01433.hp1 HG02071.hp2 HG02809.hp2 HG02965.hp2 HG03098.hp1 HG03139.hp1 HG03225.hp2 HG03453.hp2 HG03486.hp2 NA18943.hp1 NA18983.hp2 NA18997.hp1 NA19030.hp1 NA19043.hp1 NA19240.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0004 a0001c0006 others(3): Show a0001c0001 a0001c0004 a0001c0006 a0001c0017 a0001c0019 a0005c0010	a0001c0001t0012 a0001c0001t0032 a0001c0001t0033 others(8): Show a0001c0001t0012 a0001c0001t0032 a0001c0001t0033 a0001c0001t0038 a0001c0004t0019 a0001c0004t0034 a0001c0004t0037 a0001c0006t0036 a0001c0017t0035 a0001c0019t0039 a0005c0010t0020	a0001c0001t0012g0018 a0001c0001t0012g0021 a0001c0001t0012g0023 others(13): Show a0001c0001t0012g0018 a0001c0001t0012g0021 a0001c0001t0012g0023 a0001c0001t0012g0028 a0001c0001t0032g0019 a0001c0001t0033g0020 a0001c0001t0038g0025 a0001c0004t0019g0024 a0001c0004t0019g0027 a0001c0004t0034g0022 a0001c0004t0037g0030 a0001c0006t0036g0017 a0001c0017t0035g0029 a0001c0019t0039g0026 a0005c0010t0020g0015 a0005c0010t0020g0016	16	294	0.0544	-19	c.244 others(34): Show c.244+265_244+283delATGCTGGGGAGACTGAACC	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	2/18			chr1	TogoVar
LRR1_chr14_49593940_49619672	49608406	ATTTTTTT others(12): Show ATTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0045	1	37	0.0270	-19	c.100 others(36): Show c.1004+308_1004+326delTTTTTTTTTTTTTTTTTTT	LRR1	ENSG00000165501.17	transcript	ENST00000298288.11	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC27_chr10_132327193_132386508	132384983	GGGAGTGT others(12): Show GGGAGTGTCCAGGCCTTCCA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0079 a0001c0001t0001g0079	1	288	0.0035	-19	c.97 others(30): Show c.9742_*9760delGGAGTGTCCAGGCCTTCCA	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding		3476		chr10	TogoVar
LRRC28_chr15_99246481_99395729	99293593	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0008 a0001c0001t0013g0008	1	4	0.2500	-19	c.385 others(36): Show c.385+5664_385+5682delAAAAAAAAAAAAAAAAAAA	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC28_chr15_99246481_99395729	99328896	GGCCTTCA others(12): Show GGCCTTCAGACTGGGACTGA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02922.hp2 NA19030.hp1 HG02451.hp2 HG02922.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0078 a0001c0001t0089 a0001c0001t0202 a0001c0001t0078 a0001c0001t0089 a0001c0001t0202	a0001c0001t0078g0207 a0001c0001t0089g0206 a0001c0001t0202g0209 a0001c0001t0078g0207 a0001c0001t0089g0206 a0001c0001t0202g0209	3	330	0.0091	-19	c.386 others(36): Show c.386-5023_386-5005delTTCAGACTGGGACTGAGCC	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC37B_chr17_32002383_32058487	32039478	AAATATAT others(12): Show AAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0204 a0002c0002t0002g0204	1	240	0.0042	-19	c.187 others(38): Show c.1877+3841_1877+3859delATATATATATATATATATA	LRRC37B	ENSG00000185158.13	transcript	ENST00000543378.7	protein_coding	10/14		INFO_REALIGN_3_PRIME	chr17	TogoVar
LRRC3B_chr3_26617772_26715776	26646598	TAAAAAAA others(12): Show TAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp2 HG00558.hp1 others(67): Show HG00140.hp1 HG00423.hp2 HG00558.hp1 HG00621.hp2 HG00733.hp2 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01109.hp2 HG01167.hp2 HG01192.hp2 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01361.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp1 HG02040.hp1 HG02071.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02148.hp2 HG02451.hp2 HG02647.hp2 HG02735.hp2 HG02738.hp2 HG02886.hp2 HG03130.hp2 HG03471.hp1 HG03492.hp1 HG03688.hp2 HG03704.hp2 HG04199.hp2 NA18747.hp1 NA18942.hp2 NA18948.hp2 NA18953.hp1 NA18962.hp1 NA18971.hp2 NA18972.hp1 NA18977.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp1 NA18989.hp1 NA18992.hp1 NA18999.hp2 NA19009.hp1 NA19011.hp2 NA19060.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001	a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0041 others(67): Show a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0041 a0001c0001t0001g0070 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0096 a0001c0001t0001g0110 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0242 a0001c0001t0001g0254 a0001c0001t0001g0313 a0001c0001t0002g0201 a0001c0001t0002g0323 a0001c0001t0002g0325 a0001c0001t0006g0091 a0001c0001t0006g0094 a0001c0001t0007g0146 a0001c0001t0007g0152 a0001c0002t0002g0095 a0001c0002t0002g0140 a0001c0002t0002g0145 a0001c0002t0002g0167 a0001c0002t0002g0180 a0001c0002t0002g0202 a0001c0002t0002g0227 a0001c0002t0002g0273 a0001c0003t0001g0150 a0001c0003t0001g0207 a0001c0004t0001g0199	70	84	0.8333	-19	c.-16 others(40): Show c.-161+23381_-161+23399delAAAAAAAAAAAAAAAAAAA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3C_chr17_39922732_39949999	39940749	TTCTTTTT others(12): Show TTCTTTTTTTTGAGACAGGG	T T	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG03041.hp1 NA19030.hp1 HG02970.hp1 HG03041.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052	3	402	0.0075	-19	c.-81 others(34): Show c.-81-689_-81-671delTTTTTTGAGACAGGGTCTT	LRRC3C	ENSG00000204913.7	transcript	ENST00000377924.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
LRRC3C_chr17_39922732_39949999	39946973	TCTGCCCT others(12): Show TCTGCCCTTCTGCCTGGGAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0186 a0001c0001t0001g0186	1	402	0.0025	-19	c.22 others(30): Show c.2240_*2258delCTGCCCTTCTGCCTGGGAC	LRRC3C	ENSG00000204913.7	transcript	ENST00000377924.6	protein_coding		1975		chr17	TogoVar
LRRC4B_chr19_50511892_50573435	50520232	AAAAAAAA others(12): Show AAAAAAAAAAAAAAAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00639.hp1 others(27): Show HG00323.hp1 HG00323.hp2 HG00639.hp1 HG01109.hp1 HG01167.hp2 HG01358.hp1 HG01433.hp1 HG01978.hp1 HG02080.hp2 HG02602.hp1 HG02683.hp1 HG02738.hp2 HG03017.hp1 HG03239.hp1 HG03516.hp2 HG03654.hp2 HG03688.hp2 HG03831.hp2 HG03942.hp2 HG04115.hp1 NA18942.hp2 NA18944.hp1 NA18966.hp1 NA18973.hp1 NA18979.hp1 NA18979.hp2 NA18999.hp2 NA19060.hp2 NA19081.hp2 NA19088.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0001t0007 a0001c0003t0001 others(3): Show a0001c0001t0001 a0001c0001t0007 a0001c0003t0001 a0002c0002t0001 a0002c0002t0003 a0002c0004t0001	a0001c0001t0001g0046 a0001c0001t0001g0052 a0001c0001t0001g0058 others(27): Show a0001c0001t0001g0046 a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0001g0111 a0001c0001t0001g0196 a0001c0001t0001g0202 a0001c0001t0001g0245 a0001c0001t0001g0248 a0001c0001t0007g0251 a0001c0003t0001g0066 a0001c0003t0001g0312 a0002c0002t0001g0005 a0002c0002t0001g0027 a0002c0002t0001g0076 a0002c0002t0001g0082 a0002c0002t0001g0125 a0002c0002t0001g0126 a0002c0002t0001g0141 a0002c0002t0001g0181 a0002c0002t0001g0250 a0002c0002t0001g0262 a0002c0002t0001g0307 a0002c0002t0003g0353 a0002c0004t0001g0122 a0002c0004t0001g0132 a0002c0004t0001g0157 a0002c0004t0001g0199 a0002c0004t0001g0209 a0002c0004t0001g0214 a0002c0004t0001g0298	30	358	0.0838	-19	c.298 others(34): Show c.298-836_298-818delCTTCTTTTTTTTTTTTTTT	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2			chr19	TogoVar
LRRC4C_chr11_40109209_41464652	40665320	AAAAAAAT others(12): Show AAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0030 a0001c0002t0001g0030	1	44	0.0227	-19	c.-40 others(40): Show c.-406-17061_-406-17043delATATATATATATATTTTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40665322	AAAAATAT others(12): Show AAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	43	0.0233	-19	c.-40 others(40): Show c.-406-17063_-406-17045delATATATATATATATATTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40984367	GAAAGAAA others(12): Show GAAAGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02622.hp1 HG02717.hp2 others(3): Show HG02055.hp1 HG02622.hp1 HG02717.hp2 HG02922.hp1 HG03225.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0015 a0001c0001t0002g0043 a0001c0002t0001g0010 others(3): Show a0001c0001t0001g0015 a0001c0001t0002g0043 a0001c0002t0001g0010 a0001c0002t0001g0011 a0001c0002t0001g0021 a0001c0002t0001g0022	6	46	0.1304	-19	c.-49 others(40): Show c.-495-50663_-495-50645delTTTCTTTCTTTCTTTCTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC53_chr1_74464376_74517611	74500603	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02055.hp2 HG02145.hp1 others(5): Show HG00280.hp2 HG02055.hp2 HG02145.hp1 HG02280.hp2 HG02818.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0006 a0001c0001 a0005c0006	a0001c0001t0001 a0005c0006t0001 a0001c0001t0001 a0005c0006t0001	a0001c0001t0001g0047 a0001c0001t0001g0084 a0001c0001t0001g0107 others(5): Show a0001c0001t0001g0047 a0001c0001t0001g0084 a0001c0001t0001g0107 a0001c0001t0001g0244 a0001c0001t0001g0313 a0001c0001t0001g0318 a0001c0001t0001g0319 a0005c0006t0001g0031	8	12	0.6667	-19	c.-27 others(38): Show c.-27+11904_-27+11922delTTTTTTTTTTTTTTTTTTT	LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4			chr1	TogoVar
LRRC69_chr8_91097619_91224257	91118351	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG03942.hp2 HG04199.hp2 HG01069.hp1 HG03942.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0124 a0001c0001t0001g0304 a0001c0001t0001g0305	3	25	0.1200	-19	c.184 others(36): Show c.184-6117_184-6099delAAAAAAAAAAAAAAAAAAA	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC74A_chr14_76821408_76875304	76843287	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0007 a0007	a0007c0025 a0007c0025	a0007c0025t0001 a0007c0025t0001	a0007c0025t0001g0392 a0007c0025t0001g0392	1	17	0.0588	-19	c.545 others(36): Show c.545-1118_545-1100delAAAAAAAAAAAAAAAAAAA	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC74A_chr14_76821408_76875304	76869064	TCCCTGTG others(12): Show TCCCTGTGCCTCCTCACCTG	T T	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0265	1	210	0.0048	-19	c.139 others(38): Show c.1392-1057_1392-1039delTGTGCCTCCTCACCTGCCC	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC74A_chr14_76821408_76875304	76869068	TGTGCCTC others(12): Show TGTGCCTCCTCACCTGCCCC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(148): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00438.hp1 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01433.hp1 HG01884.hp2 HG01934.hp2 HG01952.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp2 HG02083.hp2 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02647.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02895.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03239.hp2 HG03453.hp2 HG03491.hp2 HG03540.hp1 HG03654.hp1 HG03688.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04204.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18944.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18956.hp2 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18965.hp2 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18981.hp1 NA18982.hp2 NA18984.hp2 NA18986.hp1 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA18998.hp1 NA19001.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19054.hp1 NA19056.hp1 NA19058.hp1 NA19062.hp1 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19080.hp1 NA19080.hp2 NA19082.hp2 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA21309.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008 a0011 a0013	a0001c0001 a0001c0007 a0001c0008 others(11): Show a0001c0001 a0001c0007 a0001c0008 a0001c0011 a0001c0020 a0002c0002 a0003c0003 a0003c0014 a0004c0006 a0005c0009 a0006c0012 a0008c0017 a0011c0016 a0013c0023	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(16): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0007t0001 a0001c0008t0001 a0001c0011t0001 a0001c0020t0001 a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 a0002c0002t0014 a0003c0003t0001 a0003c0014t0001 a0004c0006t0001 a0005c0009t0001 a0006c0012t0001 a0008c0017t0001 a0011c0016t0001 a0013c0023t0003	a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0011 others(143): Show a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0150 a0001c0001t0001g0165 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0189 a0001c0001t0001g0197 a0001c0001t0001g0202 a0001c0001t0001g0211 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0001g0223 a0001c0001t0001g0234 a0001c0001t0001g0239 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0256 a0001c0001t0001g0279 a0001c0001t0001g0283 a0001c0001t0001g0306 a0001c0001t0001g0312 a0001c0001t0001g0314 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0325 a0001c0001t0003g0016 a0001c0001t0003g0050 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0080 a0001c0001t0003g0199 a0001c0001t0005g0021 a0001c0001t0005g0028 a0001c0001t0005g0030 a0001c0007t0001g0188 a0001c0007t0001g0194 a0001c0007t0001g0278 a0001c0008t0001g0237 a0001c0008t0001g0241 a0001c0011t0001g0195 a0001c0011t0001g0395 a0001c0020t0001g0107 a0002c0002t0001g0010 a0002c0002t0001g0038 a0002c0002t0001g0041 a0002c0002t0001g0098 a0002c0002t0001g0210 a0002c0002t0001g0225 a0002c0002t0001g0258 a0002c0002t0001g0260 a0002c0002t0001g0286 a0002c0002t0001g0287 a0002c0002t0001g0288 a0002c0002t0001g0290 a0002c0002t0001g0291 a0002c0002t0001g0292 a0002c0002t0001g0299 a0002c0002t0001g0304 a0002c0002t0001g0319 a0002c0002t0003g0002 a0002c0002t0003g0048 a0002c0002t0003g0205 a0002c0002t0005g0025 a0002c0002t0014g0313 a0003c0003t0001g0333 a0003c0003t0001g0334 a0003c0003t0001g0335 a0003c0003t0001g0338 a0003c0003t0001g0339 a0003c0003t0001g0345 a0003c0003t0001g0346 a0003c0003t0001g0350 a0003c0003t0001g0355 a0003c0003t0001g0356 a0003c0003t0001g0359 a0003c0003t0001g0360 a0003c0003t0001g0365 a0003c0003t0001g0371 a0003c0003t0001g0372 a0003c0003t0001g0373 a0003c0003t0001g0380 a0003c0003t0001g0381 a0003c0003t0001g0389 a0003c0003t0001g0390 a0003c0014t0001g0384 a0004c0006t0001g0374 a0004c0006t0001g0375 a0005c0009t0001g0300 a0005c0009t0001g0307 a0005c0009t0001g0309 a0005c0009t0001g0310 a0005c0009t0001g0315 a0006c0012t0001g0242 a0008c0017t0001g0262 a0011c0016t0001g0249 a0013c0023t0003g0079	151	406	0.3719	-19	c.139 others(36): Show c.1392-997_1392-979delGCCTCCTCACCTGCCCCGT	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC7_chr1_69562922_70149364	69797557	ACTCCTGC others(12): Show ACTCCTGCCAAATTTACCTC	A A	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0077 a0001c0001t0077	a0001c0001t0077g0055 a0001c0001t0077g0055	1	106	0.0094	-19	c.421 others(36): Show c.421+5400_421+5418delCCTGCCAAATTTACCTCCT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	4/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8B_chr1_89519829_89602861	89541710	CAAAAAAA others(12): Show CAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0190 a0002c0004t0002g0190	1	20	0.0500	-19	c.-24 others(40): Show c.-241+16709_-241+16727delAAAAAAAAAAAAAAAAAAA	LRRC8B	ENSG00000197147.15	transcript	ENST00000330947.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8C_chr1_89628120_89724533	89677164	TAGGTAGA others(12): Show TAGGTAGAAGTACTTTTGCC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02615.hp1 HG02809.hp1 others(2): Show HG02257.hp1 HG02615.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0023 a0001c0001t0033 a0001c0001t0007 a0001c0001t0023 a0001c0001t0033	a0001c0001t0007g0029 a0001c0001t0007g0030 a0001c0001t0007g0031 others(2): Show a0001c0001t0007g0029 a0001c0001t0007g0030 a0001c0001t0007g0031 a0001c0001t0023g0028 a0001c0001t0033g0034	5	266	0.0188	-19	c.-4- others(34): Show c.-4-9304_-4-9286delGGTAGAAGTACTTTTGCCA	LRRC8C	ENSG00000171488.15	transcript	ENST00000370454.9	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr1	TogoVar

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