Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
AFF2_chrX_148495617_149005663	148531908	TAA TAA	T T	intron_variant intron_variant	MODIFIER	HG01256.hp1 NA18974.hp1 HG01256.hp1 NA18974.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0008 a0001c0001 a0003c0008	a0001c0001t0002 a0003c0008t0045 a0001c0001t0002 a0003c0008t0045	a0001c0001t0002g0166 a0003c0008t0045g0010 a0001c0001t0002g0166 a0003c0008t0045g0010	2	169	0.0118	-2	c.47+ others(19): Show c.47+30772_47+30773delAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148540407	CTT CTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00639.hp1 HG00738.hp1 others(17): Show HG00280.hp1 HG00639.hp1 HG00738.hp1 HG01069.hp1 HG01358.hp1 HG01515.hp1 HG01884.hp1 HG02258.hp1 HG02451.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02976.hp2 HG03017.hp1 HG03139.hp1 HG03492.hp1 HG03540.hp1 NA18522.hp1 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007	a0001c0001t0006 a0001c0001t0009 a0001c0001t0016 others(12): Show a0001c0001t0006 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017 a0001c0001t0076 a0001c0001t0099 a0001c0001t0117 a0001c0002t0018 a0001c0002t0078 a0001c0002t0087 a0001c0002t0101 a0001c0003t0026 a0001c0003t0030 a0001c0004t0113 a0001c0007t0080	a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 others(17): Show a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0001t0016g0154 a0001c0001t0016g0155 a0001c0001t0017g0145 a0001c0001t0076g0153 a0001c0001t0099g0141 a0001c0001t0117g0164 a0001c0002t0018g0151 a0001c0002t0018g0156 a0001c0002t0078g0152 a0001c0002t0087g0147 a0001c0002t0101g0160 a0001c0003t0026g0157 a0001c0003t0030g0158 a0001c0004t0113g0159 a0001c0007t0080g0162	20	169	0.1183	-2	c.47+ others(19): Show c.47+39278_47+39279delTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148546165	TAA TAA	T T	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0085 a0001c0001t0002g0085	1	169	0.0059	-2	c.47+ others(19): Show c.47+45023_47+45024delAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148551482	GAA GAA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0107 a0001c0002t0019g0107	1	169	0.0059	-2	c.47+ others(19): Show c.47+50364_47+50365delAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148566428	TTA TTA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00639.hp1 HG00738.hp1 others(22): Show HG00280.hp1 HG00639.hp1 HG00738.hp1 HG01069.hp1 HG01358.hp1 HG01515.hp1 HG01884.hp1 HG01891.hp1 HG02280.hp1 HG02451.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02818.hp1 HG02896.hp2 HG02965.hp1 HG02976.hp2 HG03139.hp1 HG03492.hp1 HG03540.hp1 NA18522.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0006 a0001c0001t0016 a0001c0001t0017 others(18): Show a0001c0001t0006 a0001c0001t0016 a0001c0001t0017 a0001c0001t0038 a0001c0001t0076 a0001c0001t0099 a0001c0001t0117 a0001c0002t0009 a0001c0002t0018 a0001c0002t0019 a0001c0002t0020 a0001c0002t0034 a0001c0002t0054 a0001c0002t0078 a0001c0002t0087 a0001c0002t0101 a0001c0003t0026 a0001c0003t0030 a0001c0003t0079 a0001c0003t0112 a0001c0004t0113	a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 others(22): Show a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 a0001c0001t0016g0154 a0001c0001t0016g0155 a0001c0001t0017g0145 a0001c0001t0038g0102 a0001c0001t0076g0153 a0001c0001t0099g0141 a0001c0001t0117g0164 a0001c0002t0009g0126 a0001c0002t0018g0151 a0001c0002t0018g0156 a0001c0002t0019g0123 a0001c0002t0020g0132 a0001c0002t0034g0077 a0001c0002t0054g0133 a0001c0002t0078g0152 a0001c0002t0087g0147 a0001c0002t0101g0160 a0001c0003t0026g0157 a0001c0003t0030g0158 a0001c0003t0079g0161 a0001c0003t0112g0130 a0001c0004t0113g0159	25	169	0.1479	-2	c.47+ others(19): Show c.47+65296_47+65297delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148574943	GGT GGT	G G	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00621.hp1 HG00639.hp2 others(77): Show HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG01074.hp1 HG01099.hp1 HG01167.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01884.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02602.hp1 HG02630.hp2 HG03017.hp1 HG03942.hp1 HG04204.hp1 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp1 NA19091.hp1 NA20805.hp1 NA20905.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0002c0009 a0003c0008 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(55): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0021 a0001c0001t0024 a0001c0001t0027 a0001c0001t0033 a0001c0001t0042 a0001c0001t0043 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0067 a0001c0001t0068 a0001c0001t0069 a0001c0001t0070 a0001c0001t0071 a0001c0001t0073 a0001c0001t0081 a0001c0001t0088 a0001c0001t0090 a0001c0001t0096 a0001c0001t0100 a0001c0001t0104 a0001c0001t0114 a0001c0001t0115 a0001c0001t0116 a0001c0001t0119 a0001c0001t0120 a0001c0001t0121 a0001c0001t0122 a0001c0001t0123 a0001c0002t0029 a0001c0002t0031 a0001c0003t0028 a0002c0009t0103 a0003c0008t0045 a0004c0006t0012	a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 others(77): Show a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0002g0020 a0001c0001t0002g0029 a0001c0001t0002g0054 a0001c0001t0002g0062 a0001c0001t0002g0085 a0001c0001t0002g0166 a0001c0001t0003g0042 a0001c0001t0003g0063 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0086 a0001c0001t0004g0043 a0001c0001t0004g0045 a0001c0001t0004g0100 a0001c0001t0007g0038 a0001c0001t0007g0048 a0001c0001t0008g0059 a0001c0001t0008g0073 a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0001t0012g0168 a0001c0001t0013g0034 a0001c0001t0013g0072 a0001c0001t0014g0055 a0001c0001t0014g0058 a0001c0001t0015g0032 a0001c0001t0015g0060 a0001c0001t0021g0103 a0001c0001t0024g0091 a0001c0001t0024g0093 a0001c0001t0027g0017 a0001c0001t0033g0083 a0001c0001t0042g0012 a0001c0001t0043g0006 a0001c0001t0048g0013 a0001c0001t0049g0105 a0001c0001t0050g0026 a0001c0001t0051g0069 a0001c0001t0052g0064 a0001c0001t0053g0027 a0001c0001t0055g0025 a0001c0001t0056g0023 a0001c0001t0057g0135 a0001c0001t0058g0097 a0001c0001t0059g0014 a0001c0001t0060g0067 a0001c0001t0063g0053 a0001c0001t0064g0084 a0001c0001t0065g0056 a0001c0001t0067g0057 a0001c0001t0068g0169 a0001c0001t0069g0047 a0001c0001t0070g0044 a0001c0001t0071g0028 a0001c0001t0073g0074 a0001c0001t0081g0052 a0001c0001t0088g0104 a0001c0001t0090g0099 a0001c0001t0096g0146 a0001c0001t0100g0140 a0001c0001t0104g0049 a0001c0001t0114g0079 a0001c0001t0115g0080 a0001c0001t0116g0075 a0001c0001t0119g0061 a0001c0001t0120g0035 a0001c0001t0121g0046 a0001c0001t0122g0092 a0001c0001t0123g0090 a0001c0002t0029g0149 a0001c0002t0031g0148 a0001c0003t0028g0005 a0002c0009t0103g0050 a0003c0008t0045g0010 a0004c0006t0012g0011	80	169	0.4734	-2	c.47+ others(19): Show c.47+73841_47+73842delTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148576793	ATG ATG	A A	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	169	0.0059	-2	c.48- others(19): Show c.48-75183_48-75182delTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148577279	ATG ATG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00639.hp1 HG00738.hp1 others(11): Show HG00280.hp1 HG00639.hp1 HG00738.hp1 HG01069.hp1 HG01358.hp1 HG01515.hp1 HG01884.hp1 HG02622.hp1 HG02976.hp2 HG03139.hp1 HG03492.hp1 NA18522.hp1 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0006 a0001c0001t0016 a0001c0001t0017 others(7): Show a0001c0001t0006 a0001c0001t0016 a0001c0001t0017 a0001c0001t0076 a0001c0001t0099 a0001c0001t0117 a0001c0002t0018 a0001c0003t0026 a0001c0003t0030 a0001c0004t0113	a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 others(11): Show a0001c0001t0006g0138 a0001c0001t0006g0144 a0001c0001t0006g0163 a0001c0001t0016g0154 a0001c0001t0016g0155 a0001c0001t0017g0145 a0001c0001t0076g0153 a0001c0001t0099g0141 a0001c0001t0117g0164 a0001c0002t0018g0151 a0001c0002t0018g0156 a0001c0003t0026g0157 a0001c0003t0030g0158 a0001c0004t0113g0159	14	169	0.0828	-2	c.48- others(19): Show c.48-74703_48-74702delTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581020	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00609.hp1 HG00621.hp1 others(110): Show HG00140.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01167.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02258.hp1 HG02602.hp1 HG02630.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03654.hp1 HG03688.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0002c0009 a0003c0008 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(80): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0001t0025 a0001c0001t0027 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0046 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0067 a0001c0001t0068 a0001c0001t0069 a0001c0001t0070 a0001c0001t0071 a0001c0001t0073 a0001c0001t0074 a0001c0001t0081 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0088 a0001c0001t0090 a0001c0001t0096 a0001c0001t0100 a0001c0001t0104 a0001c0001t0106 a0001c0001t0110 a0001c0001t0114 a0001c0001t0115 a0001c0001t0116 a0001c0001t0118 a0001c0001t0119 a0001c0001t0120 a0001c0001t0121 a0001c0001t0122 a0001c0001t0123 a0001c0002t0022 a0001c0002t0029 a0001c0002t0031 a0001c0002t0072 a0001c0002t0108 a0001c0003t0028 a0001c0003t0109 a0001c0004t0095 a0001c0007t0080 a0002c0009t0103 a0003c0008t0045 a0004c0006t0012	a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 others(110): Show a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0002g0020 a0001c0001t0002g0029 a0001c0001t0002g0054 a0001c0001t0002g0062 a0001c0001t0002g0085 a0001c0001t0002g0166 a0001c0001t0003g0042 a0001c0001t0003g0063 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0086 a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0004g0045 a0001c0001t0004g0100 a0001c0001t0005g0001 a0001c0001t0005g0009 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0006g0120 a0001c0001t0007g0038 a0001c0001t0007g0048 a0001c0001t0007g0089 a0001c0001t0008g0051 a0001c0001t0008g0059 a0001c0001t0008g0073 a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0001t0012g0168 a0001c0001t0013g0034 a0001c0001t0013g0072 a0001c0001t0014g0055 a0001c0001t0014g0058 a0001c0001t0015g0032 a0001c0001t0015g0060 a0001c0001t0017g0040 a0001c0001t0021g0103 a0001c0001t0022g0134 a0001c0001t0024g0091 a0001c0001t0024g0093 a0001c0001t0025g0081 a0001c0001t0027g0017 a0001c0001t0033g0083 a0001c0001t0035g0078 a0001c0001t0036g0139 a0001c0001t0037g0037 a0001c0001t0041g0071 a0001c0001t0042g0012 a0001c0001t0043g0006 a0001c0001t0046g0165 a0001c0001t0048g0013 a0001c0001t0049g0105 a0001c0001t0050g0026 a0001c0001t0051g0069 a0001c0001t0052g0064 a0001c0001t0053g0027 a0001c0001t0055g0025 a0001c0001t0056g0023 a0001c0001t0057g0135 a0001c0001t0058g0097 a0001c0001t0059g0014 a0001c0001t0060g0067 a0001c0001t0061g0098 a0001c0001t0063g0053 a0001c0001t0064g0084 a0001c0001t0065g0056 a0001c0001t0067g0057 a0001c0001t0068g0169 a0001c0001t0069g0047 a0001c0001t0070g0044 a0001c0001t0071g0028 a0001c0001t0073g0074 a0001c0001t0074g0033 a0001c0001t0081g0052 a0001c0001t0083g0024 a0001c0001t0084g0030 a0001c0001t0085g0167 a0001c0001t0086g0031 a0001c0001t0088g0104 a0001c0001t0090g0099 a0001c0001t0096g0146 a0001c0001t0100g0140 a0001c0001t0104g0049 a0001c0001t0106g0121 a0001c0001t0110g0118 a0001c0001t0114g0079 a0001c0001t0115g0080 a0001c0001t0116g0075 a0001c0001t0118g0088 a0001c0001t0119g0061 a0001c0001t0120g0035 a0001c0001t0121g0046 a0001c0001t0122g0092 a0001c0001t0123g0090 a0001c0002t0022g0003 a0001c0002t0029g0149 a0001c0002t0031g0148 a0001c0002t0072g0018 a0001c0002t0108g0002 a0001c0003t0028g0005 a0001c0003t0109g0122 a0001c0004t0095g0113 a0001c0007t0080g0162 a0002c0009t0103g0050 a0003c0008t0045g0010 a0004c0006t0012g0011	113	169	0.6686	-2	c.48- others(19): Show c.48-70976_48-70975delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581027	GTA GTA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02257.hp1 HG02486.hp1 others(8): Show HG02055.hp1 HG02257.hp1 HG02486.hp1 HG02615.hp1 HG02622.hp2 HG02717.hp1 HG02809.hp2 HG02976.hp1 HG03225.hp1 HG03579.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0001t0020 a0001c0001t0039 others(8): Show a0001c0001t0011 a0001c0001t0020 a0001c0001t0039 a0001c0001t0089 a0001c0001t0092 a0001c0001t0093 a0001c0002t0019 a0001c0002t0032 a0001c0002t0040 a0001c0002t0047 a0001c0002t0107	a0001c0001t0011g0112 a0001c0001t0020g0109 a0001c0001t0039g0101 others(8): Show a0001c0001t0011g0112 a0001c0001t0020g0109 a0001c0001t0039g0101 a0001c0001t0089g0110 a0001c0001t0092g0008 a0001c0001t0093g0007 a0001c0002t0019g0107 a0001c0002t0032g0114 a0001c0002t0040g0111 a0001c0002t0047g0108 a0001c0002t0107g0131	11	169	0.0651	-2	c.48- others(19): Show c.48-70965_48-70964delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581070	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0098 a0001c0001t0098	a0001c0001t0098g0119 a0001c0001t0098g0119	1	169	0.0059	-2	c.48- others(19): Show c.48-70923_48-70922delCA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581160	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00609.hp1 HG00621.hp1 others(114): Show HG00140.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01167.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02258.hp1 HG02451.hp2 HG02602.hp1 HG02630.hp1 HG02630.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0002c0009 a0003c0008 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(84): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0001t0025 a0001c0001t0027 a0001c0001t0033 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0046 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0067 a0001c0001t0068 a0001c0001t0069 a0001c0001t0070 a0001c0001t0071 a0001c0001t0073 a0001c0001t0074 a0001c0001t0081 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0088 a0001c0001t0090 a0001c0001t0096 a0001c0001t0098 a0001c0001t0100 a0001c0001t0104 a0001c0001t0106 a0001c0001t0110 a0001c0001t0114 a0001c0001t0115 a0001c0001t0116 a0001c0001t0118 a0001c0001t0119 a0001c0001t0120 a0001c0001t0121 a0001c0001t0122 a0001c0001t0123 a0001c0002t0022 a0001c0002t0029 a0001c0002t0031 a0001c0002t0034 a0001c0002t0072 a0001c0002t0094 a0001c0002t0108 a0001c0003t0028 a0001c0003t0109 a0001c0004t0095 a0001c0007t0080 a0002c0009t0103 a0003c0008t0045 a0004c0006t0012	a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 others(114): Show a0001c0001t0001g0019 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0002g0029 a0001c0001t0002g0054 a0001c0001t0002g0062 a0001c0001t0002g0085 a0001c0001t0002g0166 a0001c0001t0003g0042 a0001c0001t0003g0063 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0086 a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0004g0045 a0001c0001t0004g0100 a0001c0001t0005g0001 a0001c0001t0005g0009 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0006g0120 a0001c0001t0007g0038 a0001c0001t0007g0048 a0001c0001t0007g0089 a0001c0001t0008g0051 a0001c0001t0008g0059 a0001c0001t0008g0073 a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0012g0168 a0001c0001t0013g0034 a0001c0001t0013g0072 a0001c0001t0014g0055 a0001c0001t0014g0058 a0001c0001t0015g0032 a0001c0001t0015g0060 a0001c0001t0017g0040 a0001c0001t0021g0103 a0001c0001t0022g0134 a0001c0001t0024g0091 a0001c0001t0024g0093 a0001c0001t0025g0081 a0001c0001t0027g0017 a0001c0001t0033g0083 a0001c0001t0035g0078 a0001c0001t0036g0139 a0001c0001t0037g0037 a0001c0001t0041g0071 a0001c0001t0042g0012 a0001c0001t0043g0006 a0001c0001t0046g0165 a0001c0001t0048g0013 a0001c0001t0049g0105 a0001c0001t0050g0026 a0001c0001t0051g0069 a0001c0001t0052g0064 a0001c0001t0053g0027 a0001c0001t0055g0025 a0001c0001t0056g0023 a0001c0001t0057g0135 a0001c0001t0058g0097 a0001c0001t0059g0014 a0001c0001t0060g0067 a0001c0001t0061g0098 a0001c0001t0063g0053 a0001c0001t0064g0084 a0001c0001t0065g0056 a0001c0001t0067g0057 a0001c0001t0068g0169 a0001c0001t0069g0047 a0001c0001t0070g0044 a0001c0001t0071g0028 a0001c0001t0073g0074 a0001c0001t0074g0033 a0001c0001t0081g0052 a0001c0001t0083g0024 a0001c0001t0084g0030 a0001c0001t0085g0167 a0001c0001t0086g0031 a0001c0001t0088g0104 a0001c0001t0090g0099 a0001c0001t0096g0146 a0001c0001t0098g0119 a0001c0001t0100g0140 a0001c0001t0104g0049 a0001c0001t0106g0121 a0001c0001t0110g0118 a0001c0001t0114g0079 a0001c0001t0115g0080 a0001c0001t0116g0075 a0001c0001t0118g0088 a0001c0001t0119g0061 a0001c0001t0120g0035 a0001c0001t0121g0046 a0001c0001t0122g0092 a0001c0001t0123g0090 a0001c0002t0022g0003 a0001c0002t0029g0149 a0001c0002t0031g0148 a0001c0002t0034g0077 a0001c0002t0072g0018 a0001c0002t0094g0106 a0001c0002t0108g0002 a0001c0003t0028g0005 a0001c0003t0109g0122 a0001c0004t0095g0113 a0001c0007t0080g0162 a0002c0009t0103g0050 a0003c0008t0045g0010 a0004c0006t0012g0011	117	169	0.6923	-2	c.48- others(19): Show c.48-70833_48-70832delCA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581180	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0075 a0001c0004t0075	a0001c0004t0075g0004 a0001c0004t0075g0004	1	169	0.0059	-2	c.48- others(19): Show c.48-70813_48-70812delCA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581186	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02145.hp1 HG02738.hp1 others(5): Show HG01891.hp2 HG02145.hp1 HG02738.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG03486.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0005 a0001c0001t0006 a0001c0001t0022 others(5): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0022 a0001c0001t0046 a0001c0001t0106 a0001c0001t0110 a0001c0003t0109 a0001c0004t0095	a0001c0001t0005g0001 a0001c0001t0006g0120 a0001c0001t0022g0134 others(5): Show a0001c0001t0005g0001 a0001c0001t0006g0120 a0001c0001t0022g0134 a0001c0001t0046g0165 a0001c0001t0106g0121 a0001c0001t0110g0118 a0001c0003t0109g0122 a0001c0004t0095g0113	8	169	0.0473	-2	c.48- others(19): Show c.48-70809_48-70808delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581280	GTA GTA	G G	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	169	0.0059	-2	c.48- others(19): Show c.48-70714_48-70713delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581325	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0094 a0001c0002t0094	a0001c0002t0094g0106 a0001c0002t0094g0106	1	169	0.0059	-2	c.48- others(19): Show c.48-70668_48-70667delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581373	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0078 a0001c0002t0078	a0001c0002t0078g0152 a0001c0002t0078g0152	1	169	0.0059	-2	c.48- others(19): Show c.48-70620_48-70619delCA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581379	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02129.hp1 NA18967.hp1 HG02056.hp1 HG02129.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0027 a0001c0001t0042 a0001c0001t0002 a0001c0001t0027 a0001c0001t0042	a0001c0001t0002g0054 a0001c0001t0027g0017 a0001c0001t0042g0012 a0001c0001t0002g0054 a0001c0001t0027g0017 a0001c0001t0042g0012	3	169	0.0178	-2	c.48- others(19): Show c.48-70616_48-70615delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581388	GTA GTA	G G	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01099.hp1 HG01255.hp1 others(24): Show HG00673.hp1 HG01099.hp1 HG01255.hp1 HG01433.hp1 HG02027.hp1 HG02135.hp1 HG03041.hp2 HG03471.hp1 HG04115.hp1 HG04204.hp1 NA18940.hp1 NA18945.hp1 NA18953.hp1 NA18970.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp1 NA18990.hp1 NA18995.hp1 NA19000.hp1 NA19007.hp1 NA19012.hp1 NA19058.hp1 NA19063.hp1 NA19079.hp1 NA19083.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(22): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0024 a0001c0001t0025 a0001c0001t0043 a0001c0001t0053 a0001c0001t0059 a0001c0001t0063 a0001c0001t0065 a0001c0001t0067 a0001c0001t0071 a0001c0001t0081 a0001c0001t0086 a0001c0001t0088 a0001c0001t0104 a0001c0001t0118 a0001c0001t0119 a0001c0001t0122 a0001c0002t0072	a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0070 others(24): Show a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0070 a0001c0001t0003g0086 a0001c0001t0004g0045 a0001c0001t0005g0021 a0001c0001t0008g0051 a0001c0001t0012g0168 a0001c0001t0014g0055 a0001c0001t0015g0032 a0001c0001t0024g0093 a0001c0001t0025g0081 a0001c0001t0043g0006 a0001c0001t0053g0027 a0001c0001t0059g0014 a0001c0001t0063g0053 a0001c0001t0065g0056 a0001c0001t0067g0057 a0001c0001t0071g0028 a0001c0001t0081g0052 a0001c0001t0086g0031 a0001c0001t0088g0104 a0001c0001t0104g0049 a0001c0001t0118g0088 a0001c0001t0119g0061 a0001c0001t0122g0092 a0001c0002t0072g0018	27	169	0.1598	-2	c.48- others(19): Show c.48-70606_48-70605delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581439	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0105 a0001c0002t0105	a0001c0002t0105g0117 a0001c0002t0105g0117	1	169	0.0059	-2	c.48- others(19): Show c.48-70554_48-70553delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581469	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02622.hp2 HG02615.hp1 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0089 a0001c0001t0092 a0001c0001t0089 a0001c0001t0092	a0001c0001t0089g0110 a0001c0001t0092g0008 a0001c0001t0089g0110 a0001c0001t0092g0008	2	169	0.0118	-2	c.48- others(19): Show c.48-70524_48-70523delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581475	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02257.hp1 HG02486.hp1 others(6): Show HG02055.hp1 HG02257.hp1 HG02486.hp1 HG02717.hp1 HG02809.hp2 HG02976.hp1 HG03225.hp1 HG03579.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0001t0020 a0001c0001t0039 others(6): Show a0001c0001t0011 a0001c0001t0020 a0001c0001t0039 a0001c0001t0093 a0001c0002t0019 a0001c0002t0032 a0001c0002t0040 a0001c0002t0047 a0001c0002t0107	a0001c0001t0011g0112 a0001c0001t0020g0109 a0001c0001t0039g0101 others(6): Show a0001c0001t0011g0112 a0001c0001t0020g0109 a0001c0001t0039g0101 a0001c0001t0093g0007 a0001c0002t0019g0107 a0001c0002t0032g0114 a0001c0002t0040g0111 a0001c0002t0047g0108 a0001c0002t0107g0131	9	169	0.0533	-2	c.48- others(19): Show c.48-70523_48-70522delAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		chrX	TogoVar
AFF2_chrX_148495617_149005663	148581499	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0023 a0001c0005t0023	a0001c0005t0023g0125 a0001c0005t0023g0125	1	169	0.0059	-2	c.48- others(19): Show c.48-70494_48-70493delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581529	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0126 a0001c0002t0009g0126	1	169	0.0059	-2	c.48- others(19): Show c.48-70464_48-70463delTA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148581535	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02622.hp2 HG02615.hp1 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0089 a0001c0001t0092 a0001c0001t0089 a0001c0001t0092	a0001c0001t0089g0110 a0001c0001t0092g0008 a0001c0001t0089g0110 a0001c0001t0092g0008	2	169	0.0118	-2	c.48- others(19): Show c.48-70463_48-70462delAC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		chrX	TogoVar
AFF2_chrX_148495617_149005663	148585856	AAG AAG	A A	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02129.hp1 HG02735.hp1 others(2): Show HG02040.hp1 HG02129.hp1 HG02735.hp1 HG02896.hp1 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0048 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0048 a0001c0001t0049 a0001c0004t0095	a0001c0001t0001g0076 a0001c0001t0002g0054 a0001c0001t0048g0013 others(2): Show a0001c0001t0001g0076 a0001c0001t0002g0054 a0001c0001t0048g0013 a0001c0001t0049g0105 a0001c0004t0095g0113	5	169	0.0296	-2	c.48- others(19): Show c.48-66141_48-66140delGA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148603455	GTT GTT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02055.hp1 HG02257.hp1 others(10): Show HG01891.hp1 HG02055.hp1 HG02257.hp1 HG02486.hp1 HG02615.hp1 HG02622.hp2 HG02717.hp1 HG02896.hp2 HG02965.hp1 HG02976.hp1 HG03225.hp1 HG03579.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0011 a0001c0001t0020 a0001c0001t0039 others(9): Show a0001c0001t0011 a0001c0001t0020 a0001c0001t0039 a0001c0001t0089 a0001c0001t0092 a0001c0001t0093 a0001c0002t0019 a0001c0002t0020 a0001c0002t0032 a0001c0002t0047 a0001c0002t0107 a0001c0003t0112	a0001c0001t0011g0112 a0001c0001t0020g0109 a0001c0001t0039g0101 others(10): Show a0001c0001t0011g0112 a0001c0001t0020g0109 a0001c0001t0039g0101 a0001c0001t0089g0110 a0001c0001t0092g0008 a0001c0001t0093g0007 a0001c0002t0019g0107 a0001c0002t0019g0123 a0001c0002t0020g0132 a0001c0002t0032g0114 a0001c0002t0047g0108 a0001c0002t0107g0131 a0001c0003t0112g0130	13	169	0.0769	-2	c.48- others(19): Show c.48-48533_48-48532delTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614631	TTC TTC	T T	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0139 a0001c0001t0036g0139	1	169	0.0059	-2	c.48- others(19): Show c.48-37356_48-37355delCT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614792	TCC TCC	T T	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0040 a0001c0002t0040	a0001c0002t0040g0111 a0001c0002t0040g0111	1	169	0.0059	-2	c.48- others(19): Show c.48-37206_48-37205delCC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		chrX	TogoVar
AFF2_chrX_148495617_149005663	148614796	TTC TTC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02486.hp1 HG02615.hp1 others(6): Show HG02055.hp1 HG02486.hp1 HG02615.hp1 HG02622.hp2 HG02717.hp1 HG02976.hp1 HG03225.hp1 HG03579.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0020 a0001c0001t0039 a0001c0001t0089 others(6): Show a0001c0001t0020 a0001c0001t0039 a0001c0001t0089 a0001c0001t0092 a0001c0001t0093 a0001c0002t0019 a0001c0002t0032 a0001c0002t0047 a0001c0002t0107	a0001c0001t0020g0109 a0001c0001t0039g0101 a0001c0001t0089g0110 others(6): Show a0001c0001t0020g0109 a0001c0001t0039g0101 a0001c0001t0089g0110 a0001c0001t0092g0008 a0001c0001t0093g0007 a0001c0002t0019g0107 a0001c0002t0032g0114 a0001c0002t0047g0108 a0001c0002t0107g0131	9	169	0.0533	-2	c.48- others(19): Show c.48-37186_48-37185delTC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148615570	GAT GAT	G G	intron_variant intron_variant	MODIFIER	HG02895.hp1 NA21309.hp2 HG02895.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0106 a0001c0001t0022 a0001c0001t0106	a0001c0001t0022g0134 a0001c0001t0106g0121 a0001c0001t0022g0134 a0001c0001t0106g0121	2	169	0.0118	-2	c.48- others(19): Show c.48-36424_48-36423delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148620526	AAT AAT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0124 a0001c0001t0010g0124	1	169	0.0059	-2	c.48- others(19): Show c.48-31458_48-31457delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148629101	TTG TTG	T T	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG03017.hp1 HG03130.hp1 others(1): Show HG02602.hp1 HG03017.hp1 HG03130.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0002t0022 a0001c0002t0108 a0001c0001t0009 a0001c0002t0022 a0001c0002t0108	a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0002t0022g0003 others(1): Show a0001c0001t0009g0142 a0001c0001t0009g0143 a0001c0002t0022g0003 a0001c0002t0108g0002	4	169	0.0237	-2	c.48- others(19): Show c.48-22870_48-22869delGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148646329	GAA GAA	G G	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02809.hp2 HG02886.hp1 others(1): Show HG02572.hp1 HG02809.hp2 HG02886.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0066 a0001c0002t0040 a0001c0002t0082 others(1): Show a0001c0001t0066 a0001c0002t0040 a0001c0002t0082 a0001c0004t0075	a0001c0001t0066g0015 a0001c0002t0040g0111 a0001c0002t0082g0016 others(1): Show a0001c0001t0066g0015 a0001c0002t0040g0111 a0001c0002t0082g0016 a0001c0004t0075g0004	4	169	0.0237	-2	c.48- others(17): Show c.48-5667_48-5666delAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148648561	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0126 a0001c0002t0009g0126	1	169	0.0059	-2	c.48- others(17): Show c.48-3415_48-3414delAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148653360	AGT AGT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00673.hp1 HG02027.hp1 others(9): Show HG00140.hp1 HG00673.hp1 HG02027.hp1 HG02735.hp1 HG02738.hp1 NA18747.hp1 NA18940.hp1 NA18989.hp1 NA19005.hp1 NA19063.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 others(5): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 a0001c0001t0069 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0088	a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0005g0001 others(9): Show a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0005g0001 a0001c0001t0005g0009 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0013g0034 a0001c0001t0069g0047 a0001c0001t0084g0030 a0001c0001t0085g0167 a0001c0001t0086g0031 a0001c0001t0088g0104	12	169	0.0710	-2	c.180 others(19): Show c.180+1232_180+1233delGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	2/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148656493	ATT ATT	A A	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0126 a0001c0002t0009g0126	1	169	0.0059	-2	c.180 others(19): Show c.180+4385_180+4386delTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	2/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148676057	ATT ATT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02257.hp2 HG02280.hp2 others(9): Show HG01109.hp1 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02630.hp1 HG02818.hp2 HG03041.hp2 HG03209.hp1 HG03540.hp1 NA18522.hp1 NA20300.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0010 a0001c0001t0016 a0001c0001t0022 others(9): Show a0001c0001t0010 a0001c0001t0016 a0001c0001t0022 a0001c0001t0037 a0001c0001t0077 a0001c0002t0034 a0001c0002t0072 a0001c0002t0078 a0001c0002t0091 a0001c0002t0101 a0001c0002t0102 a0001c0002t0111	a0001c0001t0010g0124 a0001c0001t0016g0154 a0001c0001t0022g0134 others(9): Show a0001c0001t0010g0124 a0001c0001t0016g0154 a0001c0001t0022g0134 a0001c0001t0037g0037 a0001c0001t0077g0095 a0001c0002t0034g0077 a0001c0002t0072g0018 a0001c0002t0078g0152 a0001c0002t0091g0136 a0001c0002t0101g0160 a0001c0002t0102g0094 a0001c0002t0111g0096	12	169	0.0710	-2	c.104 others(23): Show c.1041+13308_1041+13309delTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148681536	ATG ATG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02451.hp1 HG02630.hp1 others(5): Show HG01109.hp1 HG02451.hp1 HG02630.hp1 HG02818.hp2 HG03041.hp2 HG03492.hp1 HG03540.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0006 a0001c0001t0010 a0001c0001t0037 others(5): Show a0001c0001t0006 a0001c0001t0010 a0001c0001t0037 a0001c0002t0034 a0001c0002t0072 a0001c0002t0078 a0001c0002t0101 a0001c0005t0023	a0001c0001t0006g0138 a0001c0001t0010g0124 a0001c0001t0037g0037 others(5): Show a0001c0001t0006g0138 a0001c0001t0010g0124 a0001c0001t0037g0037 a0001c0002t0034g0077 a0001c0002t0072g0018 a0001c0002t0078g0152 a0001c0002t0101g0160 a0001c0005t0023g0129	8	169	0.0473	-2	c.104 others(23): Show c.1041+18794_1041+18795delGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148681565	AGT AGT	A A	intron_variant intron_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0020 a0001c0001t0002g0020	1	169	0.0059	-2	c.104 others(23): Show c.1041+18815_1041+18816delTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148681583	TGA TGA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00621.hp1 HG00673.hp1 others(35): Show HG00140.hp1 HG00621.hp1 HG00673.hp1 HG01106.hp1 HG01884.hp1 HG01891.hp2 HG01978.hp2 HG02027.hp1 HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02572.hp1 HG02622.hp1 HG02698.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03688.hp1 HG04115.hp1 HG04228.hp1 NA18747.hp1 NA18940.hp1 NA18989.hp1 NA19005.hp1 NA19058.hp1 NA19062.hp1 NA19063.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(29): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0021 a0001c0001t0036 a0001c0001t0038 a0001c0001t0062 a0001c0001t0066 a0001c0001t0069 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0088 a0001c0001t0110 a0001c0001t0118 a0001c0002t0018 a0001c0002t0022 a0001c0002t0040 a0001c0002t0054 a0001c0002t0082 a0001c0002t0108 a0001c0003t0026 a0001c0003t0030 a0001c0003t0109 a0001c0004t0075 a0001c0004t0095 a0001c0004t0113 a0001c0007t0080	a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0001g0082 others(35): Show a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0002g0085 a0001c0001t0003g0042 a0001c0001t0003g0086 a0001c0001t0005g0001 a0001c0001t0005g0009 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0006g0120 a0001c0001t0013g0034 a0001c0001t0021g0150 a0001c0001t0036g0139 a0001c0001t0038g0102 a0001c0001t0062g0087 a0001c0001t0066g0015 a0001c0001t0069g0047 a0001c0001t0083g0024 a0001c0001t0084g0030 a0001c0001t0085g0167 a0001c0001t0086g0031 a0001c0001t0088g0104 a0001c0001t0110g0118 a0001c0001t0118g0088 a0001c0002t0018g0151 a0001c0002t0022g0003 a0001c0002t0040g0111 a0001c0002t0054g0133 a0001c0002t0082g0016 a0001c0002t0108g0002 a0001c0003t0026g0157 a0001c0003t0030g0158 a0001c0003t0109g0122 a0001c0004t0075g0004 a0001c0004t0095g0113 a0001c0004t0113g0159 a0001c0007t0080g0162	38	169	0.2249	-2	c.104 others(23): Show c.1041+18826_1041+18827delGA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148694810	CTT CTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG03041.hp2 HG03540.hp1 others(5): Show HG02451.hp1 HG03041.hp2 HG03540.hp1 NA18522.hp1 NA18948.hp1 NA18974.hp1 NA18989.hp1 NA19091.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0008 a0001c0001 a0001c0002 a0003c0008	a0001c0001t0002 a0001c0001t0016 a0001c0001t0085 others(4): Show a0001c0001t0002 a0001c0001t0016 a0001c0001t0085 a0001c0002t0072 a0001c0002t0078 a0001c0002t0101 a0003c0008t0045	a0001c0001t0002g0020 a0001c0001t0002g0062 a0001c0001t0016g0154 others(5): Show a0001c0001t0002g0020 a0001c0001t0002g0062 a0001c0001t0016g0154 a0001c0001t0085g0167 a0001c0002t0072g0018 a0001c0002t0078g0152 a0001c0002t0101g0160 a0003c0008t0045g0010	8	169	0.0473	-2	c.104 others(23): Show c.1041+32064_1041+32065delTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148698797	GTT GTT	G G	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00639.hp2 HG01074.hp1 others(51): Show HG00609.hp1 HG00639.hp2 HG01074.hp1 HG01099.hp1 HG01167.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01261.hp1 HG01433.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01952.hp1 HG01978.hp1 HG02015.hp1 HG02056.hp1 HG02083.hp1 HG02451.hp2 HG02630.hp1 HG02630.hp2 HG02896.hp1 HG03041.hp1 HG03041.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18948.hp1 NA18952.hp1 NA18953.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18974.hp1 NA18986.hp1 NA18990.hp1 NA19000.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19068.hp1 NA19079.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA20300.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0002c0009 a0003c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(45): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0015 a0001c0001t0017 a0001c0001t0021 a0001c0001t0027 a0001c0001t0041 a0001c0001t0043 a0001c0001t0044 a0001c0001t0046 a0001c0001t0050 a0001c0001t0052 a0001c0001t0053 a0001c0001t0055 a0001c0001t0056 a0001c0001t0059 a0001c0001t0060 a0001c0001t0063 a0001c0001t0064 a0001c0001t0068 a0001c0001t0070 a0001c0001t0071 a0001c0001t0073 a0001c0001t0081 a0001c0001t0090 a0001c0001t0098 a0001c0001t0104 a0001c0001t0110 a0001c0001t0114 a0001c0001t0115 a0001c0001t0123 a0001c0002t0029 a0001c0002t0031 a0001c0002t0034 a0001c0002t0072 a0001c0002t0094 a0001c0002t0105 a0001c0003t0028 a0001c0003t0079 a0001c0004t0095 a0001c0005t0023 a0002c0009t0103 a0003c0008t0045	a0001c0001t0002g0029 a0001c0001t0002g0062 a0001c0001t0002g0166 others(51): Show a0001c0001t0002g0029 a0001c0001t0002g0062 a0001c0001t0002g0166 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0004g0045 a0001c0001t0004g0100 a0001c0001t0007g0038 a0001c0001t0008g0051 a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0012g0168 a0001c0001t0015g0032 a0001c0001t0015g0060 a0001c0001t0017g0040 a0001c0001t0021g0103 a0001c0001t0027g0017 a0001c0001t0041g0071 a0001c0001t0043g0006 a0001c0001t0044g0127 a0001c0001t0046g0165 a0001c0001t0050g0026 a0001c0001t0052g0064 a0001c0001t0053g0027 a0001c0001t0055g0025 a0001c0001t0056g0023 a0001c0001t0059g0014 a0001c0001t0060g0067 a0001c0001t0063g0053 a0001c0001t0064g0084 a0001c0001t0068g0169 a0001c0001t0070g0044 a0001c0001t0071g0028 a0001c0001t0073g0074 a0001c0001t0081g0052 a0001c0001t0090g0099 a0001c0001t0098g0119 a0001c0001t0104g0049 a0001c0001t0110g0118 a0001c0001t0114g0079 a0001c0001t0115g0080 a0001c0001t0123g0090 a0001c0002t0029g0149 a0001c0002t0031g0148 a0001c0002t0034g0077 a0001c0002t0072g0018 a0001c0002t0094g0106 a0001c0002t0105g0117 a0001c0003t0028g0005 a0001c0003t0079g0161 a0001c0004t0095g0113 a0001c0005t0023g0125 a0002c0009t0103g0050 a0003c0008t0045g0010	54	169	0.3195	-2	c.104 others(23): Show c.1041+36048_1041+36049delTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148700419	AGT AGT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01934.hp1 HG02622.hp2 others(8): Show HG01891.hp2 HG01934.hp1 HG02622.hp2 HG02647.hp1 HG02738.hp1 HG02896.hp1 HG03041.hp1 HG03540.hp2 HG06807.hp2 NA18940.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 others(7): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0089 a0001c0001t0110 a0001c0002t0047 a0001c0002t0094 a0001c0004t0095 a0001c0005t0023	a0001c0001t0001g0070 a0001c0001t0005g0001 a0001c0001t0010g0115 others(8): Show a0001c0001t0001g0070 a0001c0001t0005g0001 a0001c0001t0010g0115 a0001c0001t0010g0116 a0001c0001t0011g0128 a0001c0001t0089g0110 a0001c0001t0110g0118 a0001c0002t0047g0108 a0001c0002t0094g0106 a0001c0004t0095g0113 a0001c0005t0023g0125	11	169	0.0651	-2	c.104 others(23): Show c.1041+37693_1041+37694delTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148701012	ATG ATG	A A	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG03041.hp2 HG03471.hp1 HG01952.hp1 HG03041.hp2 HG03471.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0009 a0001c0001 a0001c0002 a0002c0009	a0001c0001t0025 a0001c0002t0072 a0002c0009t0103 a0001c0001t0025 a0001c0002t0072 a0002c0009t0103	a0001c0001t0025g0081 a0001c0002t0072g0018 a0002c0009t0103g0050 a0001c0001t0025g0081 a0001c0002t0072g0018 a0002c0009t0103g0050	3	169	0.0178	-2	c.104 others(23): Show c.1041+38284_1041+38285delGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148704216	CTA CTA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02896.hp1 HG01891.hp2 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0110 a0001c0004t0095 a0001c0001t0110 a0001c0004t0095	a0001c0001t0110g0118 a0001c0004t0095g0113 a0001c0001t0110g0118 a0001c0004t0095g0113	2	169	0.0118	-2	c.104 others(23): Show c.1041+41458_1041+41459delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148704288	GTA GTA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02647.hp1 HG02895.hp1 HG01243.hp1 HG02647.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0044 a0001c0001t0106 a0001c0001t0011 a0001c0001t0044 a0001c0001t0106	a0001c0001t0011g0128 a0001c0001t0044g0127 a0001c0001t0106g0121 a0001c0001t0011g0128 a0001c0001t0044g0127 a0001c0001t0106g0121	3	169	0.0178	-2	c.104 others(23): Show c.1041+41530_1041+41531delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148704404	TTA TTA	T T	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0042 a0001c0001t0003g0042	1	169	0.0059	-2	c.104 others(23): Show c.1041+41644_1041+41645delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148704438	GTA GTA	G G	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0119 a0001c0001t0119	a0001c0001t0119g0061 a0001c0001t0119g0061	1	169	0.0059	-2	c.104 others(23): Show c.1041+41680_1041+41681delAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148731512	ACT ACT	A A	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0126 a0001c0002t0009g0126	1	169	0.0059	-2	c.104 others(23): Show c.1041+68747_1041+68748delCT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20	INFO_REALIGN_3_PRIME	chrX	TogoVar

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