view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AGAP1_chr2_235489043_236136793 | 236068797 | CAA | C | intron_variant | MODIFIER | HG01496.hp2 HG02109.hp2 HG02717.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003a0001c0005 | a0001c0001t0003a0001c0001t0010a0001c0001t0011others(2): Show | a0001c0001t0003g0090 a0001c0001t0010g0014 a0001c0001t0011g0020 others(2): Show |
5 | 98 | 0.0510 | -2 | c.211 others(23): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
AGAP1_chr2_235489043_236136793 | 236077126 | GAA | G | intron_variant | MODIFIER | HG00642.hp1 HG02083.hp2 HG02135.hp2 others(7): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0002a0001c0002t0001a0001c0002t0034others(6): Show | a0001c0001t0002g0046 a0001c0002t0001g0004 a0001c0002t0001g0027 others(7): Show |
10 | 98 | 0.1020 | -2 | c.211 others(23): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
AGAP1_chr2_235489043_236136793 | 236078037 | TTG | T | intron_variant | MODIFIER | HG01358.hp1 HG02080.hp1 HG02109.hp1 others(2): Show |
a0001 | a0001c0002a0001c0003a0001c0005others(1): Show | a0001c0002t0001a0001c0003t0009a0001c0005t0004others(1): Show | a0001c0002t0001g0010 a0001c0002t0001g0030 a0001c0003t0009g0096 others(2): Show |
5 | 98 | 0.0510 | -2 | c.211 others(23): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
AGAP1_chr2_235489043_236136793 | 236079369 | TTA | T | intron_variant | MODIFIER | HG02280.hp1 NA18906.hp2 |
a0001 | a0001c0002a0001c0012 | a0001c0002t0001a0001c0012t0009 | a0001c0002t0001g0004 a0001c0012t0009g0078 |
2 | 98 | 0.0204 | -2 | c.211 others(23): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 16/17 | chr2 | TogoVar | |||||||
AGAP1_chr2_235489043_236136793 | 236079370 | TAA | T | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00642.hp1 others(55): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(43): Show | a0001c0001t0002g0046 a0001c0001t0002g0049 a0001c0001t0002g0060 others(55): Show |
58 | 98 | 0.5918 | -2 | c.211 others(23): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
AGAP1_chr2_235489043_236136793 | 236079553 | TAC | T | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00642.hp1 others(59): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(45): Show | a0001c0001t0002g0046 a0001c0001t0002g0049 a0001c0001t0002g0060 others(59): Show |
62 | 98 | 0.6327 | -2 | c.211 others(23): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
AGAP1_chr2_235489043_236136793 | 236111789 | CAA | C | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG01168.hp2 others(29): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0007others(26): Show | a0001c0001t0003g0034 a0001c0001t0003g0063 a0001c0001t0003g0090 others(29): Show |
32 | 98 | 0.3265 | -2 | c.211 others(21): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
AGAP1_chr2_235489043_236136793 | 236122762 | AAC | A | intron_variant | MODIFIER | HG01496.hp2 HG02572.hp1 HG02647.hp2 others(5): Show |
a0001 | a0001c0002a0001c0005 | a0001c0002t0004a0001c0002t0013a0001c0002t0039others(2): Show | a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 others(5): Show |
8 | 98 | 0.0816 | -2 | c.237 others(21): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 17/17 | chr2 | TogoVar | |||||||
AGAP1_chr2_235489043_236136793 | 236125978 | GCT | G | 3_prime_UTR_variant | MODIFIER | HG00438.hp1 HG02080.hp2 HG02083.hp1 others(17): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0011others(6): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0007others(12): Show | a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 others(17): Show |
20 | 98 | 0.2041 | -2 | c.*18 others(13): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 18/18 | 1862 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
AGAP1_chr2_235489043_236136793 | 236131829 | GTT | G | downstream_gene_variant | MODIFIER | HG00438.hp2 HG00642.hp1 HG01358.hp2 others(11): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0021others(1): Show | a0001c0001t0002a0001c0001t0024a0001c0001t0026others(8): Show | a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0049 others(11): Show |
14 | 98 | 0.1429 | -2 | c.*77 others(13): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 37 | chr2 | TogoVar | |||||||
AGAP1_chr2_235489043_236136793 | 236131901 | CAG | C | downstream_gene_variant | MODIFIER | HG02109.hp2 HG02145.hp2 HG03139.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0011a0001c0001t0048 | a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 others(2): Show |
5 | 98 | 0.0510 | -2 | c.*77 others(13): Show |
AGAP1 | ENSG00000157985.20 | transcript | ENST00000304032.13 | protein_coding | 109 | chr2 | TogoVar | |||||||
AGAP2_chr12_57720197_57743742 | 57722691 | TAA | T | downstream_gene_variant | MODIFIER | HG00423.hp1 HG00609.hp2 HG01496.hp1 others(8): Show |
a0001a0010a0019 | a0001c0001a0010c0012a0019c0015 | a0001c0001t0001a0010c0012t0001a0019c0015t0001 | a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0010 others(8): Show |
11 | 382 | 0.0288 | -2 | c.*38 others(13): Show |
AGAP2 | ENSG00000135439.12 | transcript | ENST00000547588.6 | protein_coding | 2505 | chr12 | TogoVar | |||||||
AGAP2_chr12_57720197_57743742 | 57727173 | GGC | G | frameshift_variant | HIGH | NA19072.hp2 | a0002 | a0002c0014 | a0002c0014t0013 | a0002c0014t0013g0060 | 1 | 382 | 0.0026 | -2 | c.313 others(11): Show |
p.Pro others(6): Show |
AGAP2 | ENSG00000135439.12 | transcript | ENST00000547588.6 | protein_coding | 18/19 | 3632/5430 | 3135/3579 | 1045/1192 | chr12 | TogoVar | |||
AGAP2_chr12_57720197_57743742 | 57733185 | CTG | C | intron_variant | MODIFIER | HG02056.hp2 HG02723.hp1 HG02809.hp2 others(4): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(1): Show | a0001c0001t0001g0090 a0001c0001t0001g0146 a0001c0001t0003g0117 others(3): Show |
7 | 382 | 0.0183 | -2 | c.155 others(19): Show |
AGAP2 | ENSG00000135439.12 | transcript | ENST00000547588.6 | protein_coding | 5/18 | chr12 | TogoVar | |||||||
AGAP2_chr12_57720197_57743742 | 57733485 | CAG | C | intron_variant | MODIFIER | HG01884.hp1 HG02451.hp1 HG03225.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0022 a0001c0001t0001g0121 |
4 | 382 | 0.0105 | -2 | c.155 others(19): Show |
AGAP2 | ENSG00000135439.12 | transcript | ENST00000547588.6 | protein_coding | 5/18 | chr12 | TogoVar | |||||||
AGAP2_chr12_57720197_57743742 | 57742964 | CAT | C | upstream_gene_variant | MODIFIER | HG00544.hp2 HG01109.hp1 HG01884.hp2 others(22): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0023a0002c0009others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(7): Show | a0001c0001t0001g0016 a0001c0001t0001g0048 a0001c0001t0001g0137 others(14): Show |
25 | 382 | 0.0655 | -2 | c.-47 others(13): Show |
AGAP2 | ENSG00000135439.12 | transcript | ENST00000547588.6 | protein_coding | 4223 | chr12 | TogoVar | |||||||
AGAP3_chr7_151081475_151149434 | 151084842 | TAC | T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00423.hp1 HG00438.hp2 others(72): Show |
a0001a0006 | a0001c0001a0001c0002a0001c0007others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0025 others(71): Show |
75 | 354 | 0.2119 | -2 | c.-18 others(13): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1632 | chr7 | TogoVar | |||||||
AGAP3_chr7_151081475_151149434 | 151090380 | CTT | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(102): Show |
a0001a0003a0010 | a0001c0001a0001c0003a0001c0004others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0012 others(101): Show |
105 | 354 | 0.2966 | -2 | c.331 others(19): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
AGAP3_chr7_151081475_151149434 | 151095701 | CAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(209): Show |
a0001a0003a0007others(2): Show | a0001c0001a0001c0003a0001c0004others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(204): Show |
212 | 354 | 0.5989 | -2 | c.331 others(19): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
AGAP3_chr7_151081475_151149434 | 151098733 | CTT | C | intron_variant | MODIFIER | HG00323.hp1 HG01069.hp1 HG01071.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0195 others(4): Show |
7 | 354 | 0.0198 | -2 | c.331 others(21): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
AGAP3_chr7_151081475_151149434 | 151105787 | CGA | C | intron_variant | MODIFIER | HG02280.hp1 HG03540.hp2 HG06807.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0007 | a0001c0001t0007a0001c0002t0002a0001c0007t0002 | a0001c0001t0007g0152 a0001c0002t0002g0317 a0001c0002t0002g0318 others(1): Show |
4 | 354 | 0.0113 | -2 | c.332 others(21): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
AGAP3_chr7_151081475_151149434 | 151105792 | CCA | C | intron_variant | MODIFIER | HG00408.hp1 HG00544.hp2 HG02071.hp1 others(12): Show |
a0001a0005 | a0001c0001a0005c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(1): Show | a0001c0001t0001g0182 a0001c0001t0001g0192 a0001c0001t0001g0210 others(12): Show |
15 | 354 | 0.0424 | -2 | c.332 others(21): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
AGAP3_chr7_151081475_151149434 | 151112396 | CGT | C | intron_variant | MODIFIER | HG00280.hp2 HG00597.hp2 HG00673.hp1 others(29): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0008 a0001c0001t0001g0026 a0001c0001t0001g0084 others(28): Show |
32 | 354 | 0.0904 | -2 | c.332 others(19): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
AGAP3_chr7_151081475_151149434 | 151117662 | GTT | G | frameshift_variant | HIGH | HG03831.hp2 | a0004 | a0004c0024 | a0004c0024t0004 | a0004c0024t0004g0292 | 1 | 354 | 0.0028 | -2 | c.593 others(9): Show |
p.Phe others(5): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 5/18 | 860/3494 | 593/2736 | 198/911 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||
AGAP3_chr7_151081475_151149434 | 151145588 | TAA | T | downstream_gene_variant | MODIFIER | HG02109.hp1 HG02486.hp1 HG02615.hp2 others(7): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0006 | a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 others(7): Show |
10 | 354 | 0.0283 | -2 | c.*16 others(13): Show |
AGAP3 | ENSG00000133612.20 | transcript | ENST00000397238.7 | protein_coding | 1155 | chr7 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45821144 | ACC | A | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00609.hp1 HG00621.hp2 others(45): Show |
a0001a0003a0005others(7): Show | a0001c0001a0001c0016a0001c0020others(11): Show | a0001c0001t0001a0001c0016t0001a0001c0020t0001others(11): Show | a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0039 others(41): Show |
48 | 382 | 0.1257 | -2 | c.*47 others(13): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 4449 | chr10 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45827782 | TAA | T | intron_variant | MODIFIER | HG01069.hp1 HG01167.hp2 HG01192.hp2 others(22): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0002c0050others(4): Show | a0001c0001t0001a0002c0002t0001a0002c0050t0001others(4): Show | a0001c0001t0001g0218 a0001c0001t0001g0239 a0001c0001t0001g0249 others(18): Show |
25 | 382 | 0.0655 | -2 | c.585 others(17): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 7/7 | chr10 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45828686 | CTT | C | intron_variant | MODIFIER | HG00621.hp1 HG01070.hp2 HG01175.hp1 others(35): Show |
a0002a0004a0005others(8): Show | a0002c0002a0002c0014a0002c0018others(12): Show | a0002c0002t0001a0002c0014t0001a0002c0018t0001others(12): Show | a0002c0002t0001g0025 a0002c0002t0001g0114 a0002c0002t0001g0120 others(29): Show |
38 | 382 | 0.0995 | -2 | c.534 others(17): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 6/7 | chr10 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45829343 | TTG | T | intron_variant | MODIFIER | HG01099.hp1 HG01891.hp1 HG01978.hp1 others(13): Show |
a0006a0017a0019 | a0006c0007a0017c0024a0019c0056 | a0006c0007t0001a0017c0024t0001a0019c0056t0001 | a0006c0007t0001g0008 a0006c0007t0001g0053 a0006c0007t0001g0054 others(10): Show |
16 | 382 | 0.0419 | -2 | c.534 others(19): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 6/7 | chr10 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45838080 | CAT | C | intron_variant | MODIFIER | HG01099.hp1 HG01891.hp1 HG01978.hp1 others(16): Show |
a0001a0006a0017others(3): Show | a0001c0001a0006c0007a0017c0024others(3): Show | a0001c0001t0001a0006c0007t0001a0017c0024t0001others(3): Show | a0001c0001t0001g0223 a0006c0007t0001g0008 a0006c0007t0001g0053 others(13): Show |
19 | 382 | 0.0497 | -2 | c.396 others(19): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 4/7 | chr10 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45840042 | TAA | T | intron_variant | MODIFIER | HG01106.hp1 HG01243.hp1 HG02145.hp2 others(10): Show |
a0005a0024 | a0005c0006a0024c0032 | a0005c0006t0001a0024c0032t0001 | a0005c0006t0001g0017 a0005c0006t0001g0074 a0005c0006t0001g0075 others(9): Show |
13 | 382 | 0.0340 | -2 | c.396 others(19): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 4/7 | chr10 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45841104 | ATT | A | intron_variant | MODIFIER | HG01070.hp2 HG01257.hp2 HG02015.hp1 others(15): Show |
a0002a0007a0011others(2): Show | a0002c0002a0007c0008a0011c0012others(2): Show | a0002c0002t0001a0007c0008t0001a0011c0012t0001others(2): Show | a0002c0002t0001g0278 a0007c0008t0001g0031 a0007c0008t0001g0197 others(12): Show |
18 | 382 | 0.0471 | -2 | c.396 others(17): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 4/7 | chr10 | TogoVar | |||||||
AGAP4_chr10_45820594_45852500 | 45844665 | TAA | T | intron_variant | MODIFIER | HG00597.hp2 HG02280.hp2 HG03017.hp1 others(4): Show |
a0002a0003a0004others(1): Show | a0002c0002a0003c0004a0004c0005others(1): Show | a0002c0002t0001a0003c0004t0001a0004c0005t0001others(1): Show | a0002c0002t0001g0112 a0002c0002t0001g0119 a0003c0004t0001g0091 others(4): Show |
7 | 382 | 0.0183 | -2 | c.293 others(17): Show |
AGAP4 | ENSG00000188234.15 | transcript | ENST00000616763.6 | protein_coding | 2/7 | chr10 | TogoVar | |||||||
AGAP5_chr10_73669295_73703109 | 73669746 | AAC | A | downstream_gene_variant | MODIFIER | HG00544.hp1 HG02486.hp1 HG02895.hp1 others(12): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0002a0004c0004others(1): Show | a0001c0001t0001a0002c0002t0001a0004c0004t0002others(1): Show | a0001c0001t0001g0002 a0002c0002t0001g0014 a0002c0002t0001g0178 others(9): Show |
15 | 368 | 0.0408 | -2 | c.*48 others(13): Show |
AGAP5 | ENSG00000172650.15 | transcript | ENST00000374094.9 | protein_coding | 4548 | chr10 | TogoVar | |||||||
AGAP5_chr10_73669295_73703109 | 73673420 | ATT | A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(95): Show |
a0002a0004a0007others(2): Show | a0002c0002a0002c0011a0002c0018others(5): Show | a0002c0002t0001a0002c0002t0003a0002c0002t0006others(9): Show | a0002c0002t0001g0005 a0002c0002t0001g0013 a0002c0002t0001g0014 others(71): Show |
98 | 368 | 0.2663 | -2 | c.*11 others(13): Show |
AGAP5 | ENSG00000172650.15 | transcript | ENST00000374094.9 | protein_coding | 874 | chr10 | TogoVar | |||||||
AGAP5_chr10_73669295_73703109 | 73677376 | CTT | C | intron_variant | MODIFIER | HG00544.hp1 HG02074.hp2 HG02258.hp1 others(15): Show |
a0002a0004 | a0002c0002a0004c0004 | a0002c0002t0001a0002c0002t0006a0004c0004t0001others(1): Show | a0002c0002t0001g0180 a0002c0002t0001g0198 a0002c0002t0001g0215 others(11): Show |
18 | 368 | 0.0489 | -2 | c.534 others(17): Show |
AGAP5 | ENSG00000172650.15 | transcript | ENST00000374094.9 | protein_coding | 6/7 | chr10 | TogoVar | |||||||
AGAP5_chr10_73669295_73703109 | 73690605 | TTA | T | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp1 HG00621.hp2 others(65): Show |
a0001a0003a0004others(6): Show | a0001c0001a0003c0003a0004c0004others(6): Show | a0001c0001t0001a0003c0003t0001a0003c0003t0005others(8): Show | a0001c0001t0001g0167 a0003c0003t0001g0003 a0003c0003t0001g0006 others(48): Show |
68 | 368 | 0.1848 | -2 | c.396 others(19): Show |
AGAP5 | ENSG00000172650.15 | transcript | ENST00000374094.9 | protein_coding | 4/7 | chr10 | TogoVar | |||||||
AGAP5_chr10_73669295_73703109 | 73692633 | ATT | A | intron_variant | MODIFIER | HG02055.hp1 HG02280.hp2 HG02486.hp2 others(10): Show |
a0002a0003a0006others(3): Show | a0002c0002a0003c0003a0006c0006others(3): Show | a0002c0002t0001a0003c0003t0001a0006c0006t0001others(3): Show | a0002c0002t0001g0172 a0002c0002t0001g0210 a0003c0003t0001g0028 others(9): Show |
13 | 368 | 0.0353 | -2 | c.362 others(17): Show |
AGAP5 | ENSG00000172650.15 | transcript | ENST00000374094.9 | protein_coding | 3/7 | chr10 | TogoVar | |||||||
AGAP6_chr10_49983406_50015499 | 49988505 | CAG | C | 5_prime_UTR_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00558.hp1 others(49): Show |
a0002a0009a0018others(2): Show | a0002c0002a0002c0021a0009c0009others(3): Show | a0002c0002t0002a0002c0021t0002a0009c0009t0002others(3): Show | a0002c0002t0002g0001 a0002c0002t0002g0022 a0002c0002t0002g0023 others(20): Show |
52 | 406 | 0.1281 | -2 | c.-21 others(11): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 1/8 | 209 | chr10 | TogoVar | ||||||
AGAP6_chr10_49983406_50015499 | 49993819 | CAA | C | intron_variant | MODIFIER | HG02486.hp1 HG02735.hp2 HG02895.hp1 others(6): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0002c0002t0001a0002c0002t0002others(4): Show | a0001c0001t0001g0085 a0001c0001t0001g0106 a0002c0002t0001g0141 others(6): Show |
9 | 406 | 0.0222 | -2 | c.362 others(17): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
AGAP6_chr10_49983406_50015499 | 49997991 | CAT | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(207): Show |
a0001a0003a0005others(10): Show | a0001c0001a0001c0025a0003c0003others(13): Show | a0001c0001t0001a0001c0001t0012a0001c0025t0001others(17): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 others(127): Show |
210 | 406 | 0.5172 | -2 | c.396 others(19): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
AGAP6_chr10_49983406_50015499 | 50002088 | AAT | A | frameshift_variant | HIGH | NA18986.hp1 | a0027 | a0027c0016 | a0027c0016t0002 | a0027c0016t0002g0177 | 1 | 406 | 0.0025 | -2 | c.491 others(9): Show |
p.Ile others(5): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 5/8 | 801/2684 | 491/2061 | 164/686 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||
AGAP6_chr10_49983406_50015499 | 50007392 | CAA | C | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00733.hp1 others(24): Show |
a0002a0004a0016 | a0002c0002a0004c0004a0016c0030 | a0002c0002t0001a0002c0002t0002a0004c0004t0004others(1): Show | a0002c0002t0001g0048 a0002c0002t0001g0120 a0002c0002t0001g0138 others(16): Show |
27 | 406 | 0.0665 | -2 | c.534 others(17): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
AGAP6_chr10_49983406_50015499 | 50008914 | CAA | C | frameshift_variant | HIGH | HG00140.hp1 HG00609.hp2 HG00741.hp1 others(36): Show |
a0003 | a0003c0003a0003c0014a0003c0033 | a0003c0003t0003a0003c0003t0009a0003c0003t0010others(3): Show | a0003c0003t0003g0011 a0003c0003t0003g0017 a0003c0003t0003g0024 others(25): Show |
39 | 406 | 0.0961 | -2 | c.791 others(9): Show |
p.Lys others(5): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 8/8 | 1101/2684 | 791/2061 | 264/686 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||
AGAP6_chr10_49983406_50015499 | 50011657 | CAT | C | downstream_gene_variant | MODIFIER | HG01167.hp2 HG02451.hp1 HG02647.hp1 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0050 a0002c0002t0001g0137 a0002c0002t0001g0188 others(1): Show |
5 | 406 | 0.0123 | -2 | c.*14 others(13): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 1159 | chr10 | TogoVar | |||||||
AGAP6_chr10_49983406_50015499 | 50011766 | CAG | C | downstream_gene_variant | MODIFIER | HG02055.hp2 HG02109.hp1 HG02717.hp2 others(8): Show |
a0006a0008a0011 | a0006c0007a0008c0010a0011c0012 | a0006c0007t0004a0008c0010t0004a0011c0012t0005 | a0006c0007t0004g0051 a0006c0007t0004g0202 a0006c0007t0004g0203 others(7): Show |
11 | 406 | 0.0271 | -2 | c.*15 others(13): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 1268 | chr10 | TogoVar | |||||||
AGAP6_chr10_49983406_50015499 | 50012580 | GAA | G | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00408.hp2 HG00438.hp1 others(96): Show |
a0002a0009a0018others(4): Show | a0002c0002a0002c0021a0009c0009others(5): Show | a0002c0002t0001a0002c0002t0002a0002c0021t0002others(6): Show | a0002c0002t0001g0001 a0002c0002t0001g0006 a0002c0002t0001g0023 others(49): Show |
99 | 406 | 0.2438 | -2 | c.*23 others(13): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 2082 | chr10 | TogoVar | |||||||
AGAP6_chr10_49983406_50015499 | 50015393 | AAG | A | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00733.hp1 others(16): Show |
a0004 | a0004c0004a0004c0028 | a0004c0004t0004a0004c0028t0004 | a0004c0004t0004g0004 a0004c0004t0004g0042 a0004c0004t0004g0043 others(8): Show |
19 | 406 | 0.0468 | -2 | c.*52 others(13): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 4895 | chr10 | TogoVar | |||||||
AGAP9_chr10_47496854_47528638 | 47526110 | ATT | A | upstream_gene_variant | MODIFIER | HG00735.hp2 HG01361.hp2 HG02698.hp1 others(7): Show |
a0002 | a0002c0002a0002c0027 | a0002c0002t0002a0002c0027t0002 | a0002c0002t0002g0004 a0002c0002t0002g0170 a0002c0002t0002g0171 others(5): Show |
10 | 206 | 0.0485 | -2 | c.-25 others(13): Show |
AGAP9 | ENSG00000204172.12 | transcript | ENST00000452145.6 | protein_coding | 2473 | chr10 | TogoVar | |||||||
AGA_chr4_177425774_177447437 | 177430004 | GTT | G | downstream_gene_variant | MODIFIER | HG01255.hp2 NA18943.hp2 NA19082.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005 | a0001c0001t0001g0008 a0001c0001t0005g0033 |
4 | 442 | 0.0091 | -2 | c.*17 others(13): Show |
AGA | ENSG00000038002.9 | transcript | ENST00000264595.7 | protein_coding | 769 | chr4 | TogoVar |