view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ABCA13_chr7_48166458_48652497 | 48609528 | AGC | A | intron_variant | MODIFIER | HG01952.hp2 HG01981.hp1 NA18953.hp1 others(3): Show |
a0001a0009a0021others(3): Show | a0001c0001a0009c0044a0021c0018others(3): Show | a0001c0001t0001a0009c0044t0001a0021c0018t0001others(3): Show | a0001c0001t0001g0027 a0009c0044t0001g0100 a0021c0018t0001g0109 others(3): Show |
6 | 176 | 0.0341 | -2 | c.147 others(23): Show |
ABCA13 | ENSG00000179869.15 | transcript | ENST00000435803.6 | protein_coding | 58/61 | chr7 | TogoVar | |||||||
ABCA13_chr7_48166458_48652497 | 48624059 | AGT | A | intron_variant | MODIFIER | HG00558.hp2 HG00738.hp1 HG01433.hp2 others(28): Show |
a0001a0003a0005others(19): Show | a0001c0001a0001c0104a0003c0004others(23): Show | a0001c0001t0001a0001c0104t0005a0003c0004t0002others(24): Show | a0001c0001t0001g0082 a0001c0104t0005g0044 a0003c0004t0002g0035 others(28): Show |
31 | 122 | 0.2541 | -2 | c.148 others(23): Show |
ABCA13 | ENSG00000179869.15 | transcript | ENST00000435803.6 | protein_coding | 59/61 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
ABCA13_chr7_48166458_48652497 | 48635220 | CAA | C | intron_variant | MODIFIER | HG00408.hp1 HG00741.hp1 HG01070.hp2 others(60): Show |
a0001a0002a0003others(43): Show | a0001c0001a0001c0104a0002c0002others(47): Show | a0001c0001t0002a0001c0001t0004a0001c0104t0005others(51): Show | a0001c0001t0002g0058 a0001c0001t0004g0049 a0001c0001t0004g0164 others(60): Show |
63 | 98 | 0.6429 | -2 | c.148 others(23): Show |
ABCA13 | ENSG00000179869.15 | transcript | ENST00000435803.6 | protein_coding | 59/61 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
ABCA13_chr7_48166458_48652497 | 48636335 | CTA | C | intron_variant | MODIFIER | HG02717.hp1 HG03540.hp1 |
a0005a0053 | a0005c0063a0053c0091 | a0005c0063t0001a0053c0091t0001 | a0005c0063t0001g0010 a0053c0091t0001g0108 |
2 | 176 | 0.0114 | -2 | c.148 others(23): Show |
ABCA13 | ENSG00000179869.15 | transcript | ENST00000435803.6 | protein_coding | 59/61 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
ABCA13_chr7_48166458_48652497 | 48644589 | CTT | C | intron_variant | MODIFIER | HG00544.hp1 HG00544.hp2 HG00735.hp1 others(34): Show |
a0001a0002a0003others(20): Show | a0001c0001a0001c0010a0002c0002others(26): Show | a0001c0001t0001a0001c0001t0006a0001c0010t0001others(27): Show | a0001c0001t0001g0027 a0001c0001t0001g0040 a0001c0001t0001g0042 others(34): Show |
37 | 107 | 0.3458 | -2 | c.149 others(18): Show |
ABCA13 | ENSG00000179869.15 | transcript | ENST00000435803.6 | protein_coding | 60/61 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
ABCA13_chr7_48166458_48652497 | 48647840 | TAA | T | downstream_gene_variant | MODIFIER | HG00735.hp2 HG02895.hp1 HG02897.hp2 others(3): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0103a0002c0065others(3): Show | a0001c0001t0006a0001c0103t0006a0002c0065t0006others(3): Show | a0001c0001t0006g0178 a0001c0103t0006g0059 a0002c0065t0006g0128 others(3): Show |
6 | 176 | 0.0341 | -2 | c.*23 others(13): Show |
ABCA13 | ENSG00000179869.15 | transcript | ENST00000435803.6 | protein_coding | 344 | chr7 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104779451 | AAG | A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00408.hp1 others(138): Show |
a0001a0002a0003others(19): Show | a0001c0001a0001c0005a0001c0108others(50): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(81): Show | a0001c0001t0002g0075 a0001c0001t0002g0139 a0001c0001t0002g0288 others(137): Show |
141 | 316 | 0.4462 | -2 | c.*48 others(13): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1554 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104799394 | TCA | T | intron_variant | MODIFIER | HG03098.hp1 HG03927.hp2 HG03942.hp1 others(2): Show |
a0002a0003a0004others(1): Show | a0002c0025a0003c0002a0004c0008others(1): Show | a0002c0025t0008a0003c0002t0002a0004c0008t0001others(2): Show | a0002c0025t0008g0199 a0003c0002t0002g0042 a0004c0008t0001g0033 others(2): Show |
5 | 16 | 0.3125 | -2 | c.494 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 36/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104801392 | CTA | C | intron_variant | MODIFIER | HG00423.hp1 HG00642.hp1 HG01175.hp2 others(36): Show |
a0002a0004a0005others(7): Show | a0002c0011a0002c0017a0002c0025others(18): Show | a0002c0011t0004a0002c0011t0007a0002c0011t0012others(29): Show | a0002c0011t0004g0113 a0002c0011t0007g0119 a0002c0011t0007g0159 others(36): Show |
39 | 316 | 0.1234 | -2 | c.469 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 34/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104802289 | CAG | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00408.hp1 others(141): Show |
a0001a0003a0006others(10): Show | a0001c0001a0001c0005a0001c0035others(31): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(77): Show | a0001c0001t0001g0017 a0001c0001t0001g0056 a0001c0001t0001g0078 others(141): Show |
144 | 316 | 0.4557 | -2 | c.459 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 33/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104807845 | TAC | T | intron_variant | MODIFIER | HG00558.hp2 HG01891.hp1 NA19078.hp1 others(2): Show |
a0002a0003a0005others(1): Show | a0002c0033a0003c0002a0005c0071others(1): Show | a0002c0033t0002a0002c0033t0032a0003c0002t0002others(2): Show | a0002c0033t0002g0302 a0002c0033t0032g0025 a0003c0002t0002g0227 others(2): Show |
5 | 76 | 0.0658 | -2 | c.427 others(21): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 30/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104810141 | CAT | C | intron_variant | MODIFIER | HG00642.hp1 HG01099.hp1 HG01175.hp2 others(21): Show |
a0002a0004a0005others(6): Show | a0002c0046a0002c0057a0004c0008others(13): Show | a0002c0046t0002a0002c0057t0001a0004c0008t0003others(17): Show | a0002c0046t0002g0157 a0002c0057t0001g0151 a0004c0008t0003g0252 others(21): Show |
24 | 193 | 0.1244 | -2 | c.417 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 29/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104812469 | TCC | T | intron_variant | MODIFIER | HG02258.hp2 HG02486.hp2 HG02818.hp1 |
a0002 | a0002c0031a0002c0081 | a0002c0031t0001a0002c0081t0013 | a0002c0031t0001g0155 a0002c0031t0001g0192 a0002c0081t0013g0191 |
3 | 316 | 0.0095 | -2 | c.405 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 28/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104829943 | TAC | T | intron_variant | MODIFIER | HG01099.hp1 HG01192.hp2 HG01517.hp2 others(25): Show |
a0001a0002a0004others(6): Show | a0001c0001a0002c0025a0002c0057others(12): Show | a0001c0001t0001a0002c0025t0008a0002c0057t0001others(22): Show | a0001c0001t0001g0231 a0002c0025t0008g0199 a0002c0057t0001g0151 others(25): Show |
28 | 122 | 0.2295 | -2 | c.189 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 14/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104831149 | TAA | T | intron_variant | MODIFIER | HG00741.hp2 HG01081.hp2 HG01099.hp2 others(24): Show |
a0008a0010a0015others(2): Show | a0008c0006a0008c0047a0008c0048others(8): Show | a0008c0006t0003a0008c0006t0005a0008c0006t0006others(19): Show | a0008c0006t0003g0242 a0008c0006t0005g0063 a0008c0006t0006g0054 others(24): Show |
27 | 120 | 0.2250 | -2 | c.171 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 13/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104840925 | TAA | T | intron_variant | MODIFIER | HG00642.hp1 HG00741.hp2 HG01081.hp2 others(50): Show |
a0002a0004a0005others(8): Show | a0002c0046a0004c0087a0004c0112others(22): Show | a0002c0046t0002a0004c0087t0009a0004c0112t0005others(38): Show | a0002c0046t0002g0157 a0004c0087t0009g0118 a0004c0112t0005g0101 others(50): Show |
53 | 316 | 0.1677 | -2 | c.814 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 8/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104844027 | GAA | G | intron_variant | MODIFIER | HG01106.hp1 HG01109.hp1 HG01243.hp2 others(32): Show |
a0002a0003a0004others(10): Show | a0002c0015a0002c0031a0002c0037others(25): Show | a0002c0015t0002a0002c0015t0004a0002c0031t0001others(28): Show | a0002c0015t0002g0314 a0002c0015t0004g0005 a0002c0031t0001g0155 others(32): Show |
35 | 253 | 0.1383 | -2 | c.813 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 8/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104844824 | CAA | C | intron_variant | MODIFIER | HG01109.hp1 HG01243.hp2 HG01891.hp1 others(11): Show |
a0002a0003a0005others(3): Show | a0002c0015a0002c0075a0003c0056others(9): Show | a0002c0015t0002a0002c0015t0004a0002c0075t0027others(10): Show | a0002c0015t0002g0314 a0002c0015t0004g0005 a0002c0075t0027g0153 others(11): Show |
14 | 316 | 0.0443 | -2 | c.813 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 8/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104853372 | CCA | C | intron_variant | MODIFIER | HG03098.hp2 HG03540.hp1 NA19043.hp1 |
a0002a0003 | a0002c0037a0002c0046a0003c0077 | a0002c0037t0001a0002c0046t0002a0003c0077t0005 | a0002c0037t0001g0189 a0002c0046t0002g0157 a0003c0077t0005g0311 |
3 | 315 | 0.0095 | -2 | c.720 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 7/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104862649 | CGG | C | intron_variant | MODIFIER | HG02818.hp2 HG02970.hp2 HG03239.hp2 others(1): Show |
a0002a0007a0008 | a0002c0011a0007c0003a0008c0006others(1): Show | a0002c0011t0004a0007c0003t0016a0008c0006t0047others(1): Show | a0002c0011t0004g0113 a0007c0003t0016g0060 a0008c0006t0047g0053 others(1): Show |
4 | 244 | 0.0164 | -2 | c.422 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104862654 | CGG | C | intron_variant | MODIFIER | HG00738.hp2 HG01261.hp1 HG03927.hp2 |
a0001a0004 | a0001c0001a0004c0008 | a0001c0001t0001a0004c0008t0004 | a0001c0001t0001g0078 a0001c0001t0001g0273 a0004c0008t0004g0178 |
3 | 297 | 0.0101 | -2 | c.422 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104862659 | CGG | C | intron_variant | MODIFIER | HG01255.hp1 HG01884.hp2 HG01978.hp2 |
a0002a0006 | a0002c0017a0006c0004a0006c0012 | a0002c0017t0026a0006c0004t0004a0006c0012t0010 | a0002c0017t0026g0209 a0006c0004t0004g0068 a0006c0012t0010g0253 |
3 | 263 | 0.0114 | -2 | c.422 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104862669 | CGG | C | intron_variant | MODIFIER | HG01070.hp2 HG01169.hp1 HG01934.hp1 others(4): Show |
a0001a0002a0007others(2): Show | a0001c0001a0002c0011a0007c0003others(3): Show | a0001c0001t0001a0001c0001t0011a0002c0011t0004others(4): Show | a0001c0001t0001g0083 a0001c0001t0011g0086 a0002c0011t0004g0113 others(4): Show |
7 | 268 | 0.0261 | -2 | c.422 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104862689 | CGG | C | intron_variant | MODIFIER | HG00099.hp2 HG01070.hp2 HG01099.hp1 others(19): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0005a0001c0109others(12): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(17): Show | a0001c0001t0001g0093 a0001c0001t0001g0215 a0001c0001t0001g0293 others(19): Show |
22 | 226 | 0.0973 | -2 | c.422 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104862698 | CCG | C | intron_variant | MODIFIER | HG01081.hp2 HG02922.hp2 HG03195.hp2 others(3): Show |
a0005a0008a0012 | a0005c0052a0008c0006a0008c0048others(2): Show | a0005c0052t0001a0008c0006t0003a0008c0048t0030others(2): Show | a0005c0052t0001g0195 a0008c0006t0003g0242 a0008c0048t0030g0023 others(3): Show |
6 | 316 | 0.0190 | -2 | c.422 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104870120 | CAG | C | intron_variant | MODIFIER | HG00642.hp1 HG00741.hp1 HG01099.hp1 others(32): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0005a0001c0035others(24): Show | a0001c0001t0004a0001c0001t0006a0001c0001t0039others(28): Show | a0001c0001t0004g0021 a0001c0001t0006g0051 a0001c0001t0039g0158 others(32): Show |
35 | 316 | 0.1108 | -2 | c.422 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104882028 | TAA | T | intron_variant | MODIFIER | HG00558.hp2 HG01891.hp2 HG02109.hp2 others(19): Show |
a0002a0004a0005others(7): Show | a0002c0024a0002c0057a0004c0042others(13): Show | a0002c0024t0008a0002c0057t0001a0004c0042t0008others(17): Show | a0002c0024t0008g0009 a0002c0057t0001g0151 a0004c0042t0008g0084 others(19): Show |
22 | 42 | 0.5238 | -2 | c.421 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 5/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104885479 | AAC | A | intron_variant | MODIFIER | HG00741.hp1 HG01099.hp1 HG01106.hp1 others(27): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0005a0002c0011others(19): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(25): Show | a0001c0001t0001g0083 a0001c0001t0003g0267 a0001c0001t0004g0021 others(27): Show |
30 | 316 | 0.0949 | -2 | c.161 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 3/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104888058 | GGT | G | intron_variant | MODIFIER | HG02155.hp2 NA19060.hp2 NA19068.hp2 |
a0001a0002 | a0001c0005a0002c0011 | a0001c0005t0002a0002c0011t0004 | a0001c0005t0002g0123 a0001c0005t0002g0130 a0002c0011t0004g0177 |
3 | 183 | 0.0164 | -2 | c.160 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 3/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104891966 | TAA | T | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00544.hp1 others(92): Show |
a0001a0002a0003others(21): Show | a0001c0001a0001c0005a0001c0035others(54): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(81): Show | a0001c0001t0003g0090 a0001c0001t0004g0250 a0001c0001t0006g0044 others(92): Show |
95 | 201 | 0.4726 | -2 | c.67- others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 2/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104892077 | ACT | A | intron_variant | MODIFIER | HG01109.hp1 HG02965.hp2 HG03098.hp2 others(2): Show |
a0002a0003a0017 | a0002c0032a0002c0037a0002c0046others(2): Show | a0002c0032t0001a0002c0037t0001a0002c0046t0002others(2): Show | a0002c0032t0001g0026 a0002c0037t0001g0189 a0002c0046t0002g0157 others(2): Show |
5 | 316 | 0.0158 | -2 | c.67- others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 2/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104904564 | CAA | C | intron_variant | MODIFIER | HG01255.hp2 HG01952.hp2 HG02572.hp1 others(6): Show |
a0002a0003a0005others(4): Show | a0002c0025a0002c0074a0003c0056others(5): Show | a0002c0025t0015a0002c0074t0027a0003c0056t0001others(5): Show | a0002c0025t0015g0197 a0002c0074t0027g0214 a0003c0056t0001g0203 others(6): Show |
9 | 238 | 0.0378 | -2 | c.-92 others(17): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104909607 | TAC | T | intron_variant | MODIFIER | HG00099.hp2 HG00609.hp1 HG00621.hp1 others(28): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0109a0002c0015others(19): Show | a0001c0001t0001a0001c0001t0004a0001c0109t0001others(26): Show | a0001c0001t0001g0264 a0001c0001t0004g0250 a0001c0109t0001g0287 others(28): Show |
31 | 117 | 0.2650 | -2 | c.-92 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104917437 | CTA | C | intron_variant | MODIFIER | HG00738.hp1 HG01071.hp2 HG01081.hp1 others(29): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0097a0002c0015others(21): Show | a0001c0001t0003a0001c0001t0023a0001c0001t0043others(24): Show | a0001c0001t0003g0221 a0001c0001t0023g0219 a0001c0001t0023g0220 others(28): Show |
32 | 316 | 0.1013 | -2 | c.-93 others(21): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104924624 | AAG | A | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00423.hp1 others(64): Show |
a0001a0002a0003others(16): Show | a0001c0001a0001c0005a0001c0035others(26): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(48): Show | a0001c0001t0001g0056 a0001c0001t0001g0078 a0001c0001t0001g0083 others(64): Show |
67 | 316 | 0.2120 | -2 | c.-93 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104926449 | CAA | C | intron_variant | MODIFIER | HG00558.hp1 HG00642.hp1 HG00673.hp1 others(157): Show |
a0001a0002a0003others(25): Show | a0001c0001a0001c0005a0001c0035others(78): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(120): Show | a0001c0001t0001g0017 a0001c0001t0001g0089 a0001c0001t0001g0093 others(156): Show |
160 | 243 | 0.6584 | -2 | c.-93 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104926459 | AAC | A | intron_variant | MODIFIER | HG00741.hp1 HG01346.hp2 HG01884.hp2 others(6): Show |
a0001a0002a0003others(6): Show | a0001c0001a0002c0017a0003c0038others(6): Show | a0001c0001t0001a0002c0017t0026a0003c0038t0003others(6): Show | a0001c0001t0001g0215 a0002c0017t0026g0209 a0003c0038t0003g0217 others(6): Show |
9 | 316 | 0.0285 | -2 | c.-93 others(19): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1/49 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104929173 | CAT | C | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00423.hp1 others(64): Show |
a0001a0003a0004others(14): Show | a0001c0001a0001c0005a0001c0035others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(46): Show | a0001c0001t0001g0056 a0001c0001t0001g0078 a0001c0001t0001g0083 others(64): Show |
67 | 316 | 0.2120 | -2 | c.-13 others(13): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 1019 | chr9 | TogoVar | |||||||
ABCA1_chr9_104776006_104933155 | 104932825 | CAA | C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00544.hp2 HG00558.hp1 others(66): Show |
a0001a0002a0003others(14): Show | a0001c0001a0001c0005a0001c0108others(37): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(51): Show | a0001c0001t0001g0017 a0001c0001t0001g0121 a0001c0001t0001g0215 others(66): Show |
69 | 174 | 0.3966 | -2 | c.-49 others(13): Show |
ABCA1 | ENSG00000165029.17 | transcript | ENST00000374736.8 | protein_coding | 4671 | chr9 | TogoVar | |||||||
ABCA2_chr9_137002234_137033237 | 137002737 | TGA | T | downstream_gene_variant | MODIFIER | HG02258.hp2 HG02622.hp2 HG02647.hp1 others(2): Show |
a0001a0009a0011 | a0001c0001a0001c0040a0009c0047others(1): Show | a0001c0001t0001a0001c0040t0001a0009c0047t0001others(1): Show | a0001c0001t0001g0017 a0001c0040t0001g0172 a0009c0047t0001g0174 others(1): Show |
5 | 318 | 0.0157 | -2 | c.*51 others(13): Show |
ABCA2 | ENSG00000107331.18 | transcript | ENST00000341511.11 | protein_coding | 4496 | chr9 | TogoVar | |||||||
ABCA2_chr9_137002234_137033237 | 137004285 | TTA | T | downstream_gene_variant | MODIFIER | HG01891.hp2 HG02280.hp2 HG03516.hp2 |
a0001 | a0001c0008 | a0001c0008t0001 | a0001c0008t0001g0011 | 3 | 318 | 0.0094 | -2 | c.*36 others(13): Show |
ABCA2 | ENSG00000107331.18 | transcript | ENST00000341511.11 | protein_coding | 2948 | chr9 | TogoVar | |||||||
ABCA2_chr9_137002234_137033237 | 137004837 | CTG | C | downstream_gene_variant | MODIFIER | HG02258.hp1 HG03225.hp2 HG03453.hp1 |
a0001 | a0001c0007a0001c0014a0001c0056 | a0001c0007t0004a0001c0014t0004a0001c0056t0001 | a0001c0007t0004g0049 a0001c0014t0004g0165 a0001c0056t0001g0198 |
3 | 318 | 0.0094 | -2 | c.*30 others(13): Show |
ABCA2 | ENSG00000107331.18 | transcript | ENST00000341511.11 | protein_coding | 2396 | chr9 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2289961 | TCA | T | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00408.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0024others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(3): Show | a0001c0001t0001g0100 a0001c0001t0003g0026 a0001c0002t0001g0045 others(5): Show |
8 | 44 | 0.1818 | -2 | c.251 others(19): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 19/32 | chr16 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2304500 | CTT | C | intron_variant | MODIFIER | HG01261.hp2 HG01891.hp2 HG02647.hp2 others(3): Show |
a0001 | a0001c0001a0001c0003a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(2): Show | a0001c0001t0001g0219 a0001c0001t0002g0191 a0001c0003t0001g0148 others(3): Show |
6 | 178 | 0.0337 | -2 | c.128 others(19): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 11/32 | chr16 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2307016 | CAA | C | intron_variant | MODIFIER | HG00642.hp2 HG00735.hp1 HG01099.hp2 others(31): Show |
a0001a0006a0007others(1): Show | a0001c0001a0001c0003a0001c0004others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(11): Show | a0001c0001t0001g0189 a0001c0001t0002g0215 a0001c0001t0008g0178 others(31): Show |
34 | 178 | 0.1910 | -2 | c.128 others(21): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 11/32 | chr16 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2313552 | CAA | C | intron_variant | MODIFIER | HG00323.hp2 HG00642.hp2 HG00735.hp1 others(27): Show |
a0001a0006a0007 | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0146 a0001c0001t0001g0189 a0001c0001t0002g0215 others(27): Show |
30 | 213 | 0.1408 | -2 | c.111 others(21): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 10/32 | chr16 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2315203 | TAC | T | intron_variant | MODIFIER | HG01081.hp2 HG01192.hp1 HG02486.hp1 others(10): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0062 a0001c0001t0001g0093 a0001c0001t0002g0192 others(10): Show |
13 | 181 | 0.0718 | -2 | c.111 others(21): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 10/32 | chr16 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2316490 | CAA | C | intron_variant | MODIFIER | HG00642.hp2 HG01123.hp2 HG01167.hp2 others(6): Show |
a0001 | a0001c0003a0001c0004a0001c0007others(1): Show | a0001c0003t0001a0001c0004t0001a0001c0007t0001others(1): Show | a0001c0003t0001g0160 a0001c0004t0001g0067 a0001c0004t0001g0080 others(6): Show |
9 | 24 | 0.3750 | -2 | c.111 others(19): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 10/32 | chr16 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2330319 | ATT | A | intron_variant | MODIFIER | HG00639.hp2 HG01071.hp1 HG01243.hp2 others(36): Show |
a0001a0007a0008 | a0001c0001a0001c0003a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0188 a0001c0001t0002g0191 a0001c0001t0002g0192 others(36): Show |
39 | 228 | 0.1711 | -2 | c.-53 others(19): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 1/32 | chr16 | TogoVar | |||||||
ABCA3_chr16_2270881_2345728 | 2330697 | CTT | C | intron_variant | MODIFIER | HG01884.hp1 HG01891.hp2 HG02258.hp2 others(9): Show |
a0001a0006 | a0001c0001a0001c0005a0001c0009others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0005t0001others(3): Show | a0001c0001t0001g0143 a0001c0001t0002g0217 a0001c0005t0001g0042 others(9): Show |
12 | 23 | 0.5217 | -2 | c.-53 others(19): Show |
ABCA3 | ENSG00000167972.14 | transcript | ENST00000301732.10 | protein_coding | 1/32 | chr16 | TogoVar |