Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LOC128706665_chr20_10408708_10439222	10431527	AAAACCAA others(13): Show AAAACCAAACCAAACCAAACC	A A	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18969.hp1 NA18954.hp2 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0026	2	408	0.0049	-20	c.-22 others(37): Show c.-22+2561_-22+2580delGGTTTGGTTTGGTTTGGTTT	LOC128706665	ENSG00000285723.2	transcript	ENST00000649912.2	protein_coding	1/2			chr20	TogoVar
LOC128706666_chr20_10408708_10439222	10431527	AAAACCAA others(13): Show AAAACCAAACCAAACCAAACC	A A	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18969.hp1 NA18954.hp2 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0026	2	408	0.0049	-20	c.-27 others(39): Show c.-276+2561_-276+2580delGGTTTGGTTTGGTTTGGTTT	LOC128706666	ENSG00000285508.2	transcript	ENST00000713549.1	protein_coding	1/2			chr20	TogoVar
LOC400499_chr16_11367015_11532247	11397753	GGGATGGA others(13): Show GGGATGGAGGGAGGGAGGGAT	G G	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0071 a0071	a0071c0262 a0071c0262	a0071c0262t0003 a0071c0262t0003	a0071c0262t0003g0186 a0071c0262t0003g0186	1	310	0.0032	-20	c.792 others(37): Show c.7923+575_7923+594delATCCCTCCCTCCCTCCATCC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	53/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11448515	AAAACAAA others(13): Show AAAACAAACAAACAAACAAAC	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03098.hp1 HG03453.hp2 others(2): Show HG01243.hp2 HG03098.hp1 HG03453.hp2 HG06807.hp1 NA19030.hp1	a0067 a0152 a0164 others(2): Show a0067 a0152 a0164 a0194 a0229	a0067c0052 a0152c0051 a0164c0230 others(2): Show a0067c0052 a0152c0051 a0164c0230 a0194c0269 a0229c0192	a0067c0052t0003 a0152c0051t0006 a0164c0230t0012 others(2): Show a0067c0052t0003 a0152c0051t0006 a0164c0230t0012 a0194c0269t0010 a0229c0192t0007	a0067c0052t0003g0037 a0152c0051t0006g0235 a0164c0230t0012g0224 others(2): Show a0067c0052t0003g0037 a0152c0051t0006g0235 a0164c0230t0012g0224 a0194c0269t0010g0290 a0229c0192t0007g0026	5	310	0.0161	-20	c.444 others(37): Show c.4446+384_4446+403delGTTTGTTTGTTTGTTTGTTT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	30/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11483542	CCAAACAA others(13): Show CCAAACAAAAAAGAGTACATG	C C	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0215 a0215	a0215c0137 a0215c0137	a0215c0137t0003 a0215c0137t0003	a0215c0137t0003g0125 a0215c0137t0003g0125	1	310	0.0032	-20	c.220 others(39): Show c.2208+1317_2208+1336delCATGTACTCTTTTTTGTTTG	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	16/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11492666	TCCCACCT others(13): Show TCCCACCTACTCAGGAGGCTG	T T	intron_variant intron_variant	MODIFIER	NA18945.hp2 NA18945.hp2	a0031 a0031	a0031c0010 a0031c0010	a0031c0010t0002 a0031c0010t0002	a0031c0010t0002g0251 a0031c0010t0002g0251	1	310	0.0032	-20	c.158 others(37): Show c.1585-841_1585-822delCAGCCTCCTGAGTAGGTGGG	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	12/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11493523	CACAGTAG others(13): Show CACAGTAGGTGCTCATTAAAT	C C	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0244 a0001c0003t0001g0244	1	310	0.0032	-20	c.158 others(37): Show c.1584+101_1584+120delATTTAATGAGCACCTACTGT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	12/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11493824	AGGGGCAG others(13): Show AGGGGCAGTGGCGTGGGGGGC	A A	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02293.hp1 HG03225.hp1 others(6): Show HG00609.hp1 HG02293.hp1 HG03225.hp1 HG04228.hp1 NA18955.hp2 NA18997.hp2 NA19005.hp1 NA19011.hp2 NA19081.hp1	a0007 a0021 a0036 others(5): Show a0007 a0021 a0036 a0110 a0159 a0192 a0210 a0238	a0007c0004 a0021c0018 a0036c0017 others(5): Show a0007c0004 a0021c0018 a0036c0017 a0110c0152 a0159c0160 a0192c0260 a0210c0161 a0238c0153	a0007c0004t0001 a0021c0018t0002 a0036c0017t0003 others(5): Show a0007c0004t0001 a0021c0018t0002 a0036c0017t0003 a0110c0152t0003 a0159c0160t0004 a0192c0260t0001 a0210c0161t0001 a0238c0153t0001	a0007c0004t0001g0137 a0021c0018t0002g0252 a0036c0017t0003g0092 others(6): Show a0007c0004t0001g0137 a0021c0018t0002g0252 a0036c0017t0003g0092 a0036c0017t0003g0216 a0110c0152t0003g0207 a0159c0160t0004g0305 a0192c0260t0001g0138 a0210c0161t0001g0154 a0238c0153t0001g0189	9	310	0.0290	-20	c.143 others(35): Show c.1432-48_1432-29delGCCCCCCACGCCACTGCCCC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	11/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11494059	GGGGGCGG others(13): Show GGGGGCGGGGCAGTGGCGTGA	G G	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02970.hp2 HG02074.hp1 HG02970.hp2	a0090 a0147 a0090 a0147	a0090c0154 a0147c0083 a0090c0154 a0147c0083	a0090c0154t0003 a0147c0083t0002 a0090c0154t0003 a0147c0083t0002	a0090c0154t0003g0279 a0147c0083t0002g0020 a0090c0154t0003g0279 a0147c0083t0002g0020	2	310	0.0065	-20	c.143 others(37): Show c.1432-283_1432-264delTCACGCCACTGCCCCGCCCC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	11/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11494102	AGGGGCAG others(13): Show AGGGGCAGTGGCGTGGGGGAG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG01243.hp2 others(14): Show HG00408.hp1 HG00597.hp1 HG01243.hp2 HG01257.hp2 HG02027.hp1 HG02135.hp1 HG02155.hp1 HG02257.hp2 HG03041.hp1 HG03098.hp1 NA18956.hp1 NA18977.hp1 NA18985.hp1 NA18986.hp1 NA18995.hp1 NA19065.hp1 NA19079.hp2	a0001 a0002 a0004 others(13): Show a0001 a0002 a0004 a0005 a0032 a0042 a0044 a0067 a0070 a0096 a0100 a0105 a0150 a0152 a0221 a0234	a0001c0014 a0002c0062 a0004c0013 others(13): Show a0001c0014 a0002c0062 a0004c0013 a0005c0129 a0032c0088 a0042c0048 a0044c0044 a0067c0052 a0070c0126 a0096c0131 a0100c0047 a0105c0127 a0150c0057 a0152c0051 a0221c0130 a0234c0236	a0001c0014t0001 a0002c0062t0004 a0004c0013t0001 others(13): Show a0001c0014t0001 a0002c0062t0004 a0004c0013t0001 a0005c0129t0003 a0032c0088t0001 a0042c0048t0001 a0044c0044t0004 a0067c0052t0003 a0070c0126t0005 a0096c0131t0002 a0100c0047t0001 a0105c0127t0002 a0150c0057t0002 a0152c0051t0006 a0221c0130t0002 a0234c0236t0001	a0001c0014t0001g0151 a0002c0062t0004g0255 a0004c0013t0001g0208 others(14): Show a0001c0014t0001g0151 a0002c0062t0004g0255 a0004c0013t0001g0208 a0004c0013t0001g0250 a0005c0129t0003g0209 a0032c0088t0001g0077 a0042c0048t0001g0270 a0044c0044t0004g0268 a0067c0052t0003g0037 a0070c0126t0005g0004 a0096c0131t0002g0263 a0100c0047t0001g0221 a0105c0127t0002g0299 a0150c0057t0002g0297 a0152c0051t0006g0235 a0221c0130t0002g0245 a0234c0236t0001g0106	17	310	0.0548	-20	c.143 others(37): Show c.1432-326_1432-307delCTCCCCCACGCCACTGCCCC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	11/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11496888	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02258.hp1 HG02886.hp1 others(2): Show HG01891.hp2 HG02258.hp1 HG02886.hp1 HG02976.hp2 HG03453.hp1	a0081 a0106 a0139 others(2): Show a0081 a0106 a0139 a0149 a0163	a0081c0039 a0106c0041 a0139c0038 others(2): Show a0081c0039 a0106c0041 a0139c0038 a0149c0042 a0163c0040	a0081c0039t0013 a0106c0041t0002 a0139c0038t0002 others(2): Show a0081c0039t0013 a0106c0041t0002 a0139c0038t0002 a0149c0042t0006 a0163c0040t0005	a0081c0039t0013g0309 a0106c0041t0002g0296 a0139c0038t0002g0030 others(2): Show a0081c0039t0013g0309 a0106c0041t0002g0296 a0139c0038t0002g0030 a0149c0042t0006g0034 a0163c0040t0005g0038	5	310	0.0161	-20	c.124 others(39): Show c.1246-2148_1246-2129delCACACACACACACACACACA	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	10/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11515874	CAGCCCAG others(13): Show CAGCCCAGCCCAGCCCAGCCT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00558.hp2 HG00597.hp2 others(33): Show HG00408.hp2 HG00558.hp2 HG00597.hp2 HG00673.hp1 HG01081.hp2 HG01243.hp1 HG01255.hp2 HG01361.hp1 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02129.hp1 HG02132.hp1 HG02165.hp2 HG02257.hp1 HG02559.hp1 HG02965.hp2 HG03471.hp2 HG03579.hp1 HG03927.hp2 NA18747.hp2 NA18906.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18956.hp1 NA18964.hp1 NA18970.hp1 NA18970.hp2 NA18974.hp1 NA19005.hp2 NA19011.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA21309.hp1	a0002 a0003 a0004 others(26): Show a0002 a0003 a0004 a0005 a0019 a0024 a0031 a0032 a0037 a0043 a0045 a0059 a0066 a0088 a0089 a0103 a0104 a0116 a0145 a0166 a0175 a0186 a0199 a0205 a0214 a0226 a0232 a0233 a0253	a0002c0001 a0002c0062 a0003c0096 others(27): Show a0002c0001 a0002c0062 a0003c0096 a0004c0147 a0005c0145 a0019c0012 a0024c0064 a0031c0010 a0032c0088 a0037c0011 a0043c0061 a0045c0060 a0059c0110 a0066c0053 a0088c0144 a0089c0091 a0103c0143 a0104c0035 a0116c0122 a0145c0099 a0166c0100 a0175c0101 a0186c0108 a0199c0036 a0205c0065 a0214c0094 a0226c0066 a0232c0076 a0233c0128 a0253c0067	a0002c0001t0003 a0002c0062t0004 a0003c0096t0001 others(27): Show a0002c0001t0003 a0002c0062t0004 a0003c0096t0001 a0004c0147t0001 a0005c0145t0003 a0019c0012t0002 a0024c0064t0003 a0031c0010t0002 a0032c0088t0001 a0037c0011t0001 a0043c0061t0001 a0045c0060t0001 a0059c0110t0003 a0066c0053t0001 a0088c0144t0001 a0089c0091t0009 a0103c0143t0001 a0104c0035t0007 a0116c0122t0004 a0145c0099t0001 a0166c0100t0008 a0175c0101t0002 a0186c0108t0001 a0199c0036t0002 a0205c0065t0002 a0214c0094t0001 a0226c0066t0001 a0232c0076t0002 a0233c0128t0001 a0253c0067t0001	a0002c0001t0003g0201 a0002c0001t0003g0202 a0002c0001t0003g0247 others(33): Show a0002c0001t0003g0201 a0002c0001t0003g0202 a0002c0001t0003g0247 a0002c0001t0003g0256 a0002c0062t0004g0255 a0003c0096t0001g0219 a0004c0147t0001g0146 a0005c0145t0003g0204 a0019c0012t0002g0023 a0019c0012t0002g0025 a0024c0064t0003g0172 a0031c0010t0002g0251 a0031c0010t0002g0265 a0032c0088t0001g0077 a0037c0011t0001g0173 a0037c0011t0001g0205 a0043c0061t0001g0076 a0045c0060t0001g0254 a0059c0110t0003g0068 a0066c0053t0001g0075 a0088c0144t0001g0234 a0089c0091t0009g0220 a0103c0143t0001g0171 a0104c0035t0007g0032 a0116c0122t0004g0307 a0145c0099t0001g0242 a0166c0100t0008g0029 a0175c0101t0002g0142 a0186c0108t0001g0206 a0199c0036t0002g0036 a0205c0065t0002g0067 a0214c0094t0001g0111 a0226c0066t0001g0203 a0232c0076t0002g0135 a0233c0128t0001g0281 a0253c0067t0001g0304	36	310	0.1161	-20	c.654 others(33): Show c.654+35_654+54delAGGCTGGGCTGGGCTGGGCT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	6/66			chr16	TogoVar
LONP1_chr19_5686834_5725146	5697649	TTGGGCTT others(13): Show TTGGGCTTTGACCGAGGAACG	T T	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01081.hp1 HG01109.hp1 others(2): Show HG01074.hp1 HG01081.hp1 HG01109.hp1 HG01975.hp1 HG02273.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 others(2): Show a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0062	5	386	0.0130	-20	c.168 others(37): Show c.1686-912_1686-893delCGTTCCTCGGTCAAAGCCCA	LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	10/17			chr19	TogoVar
LONP1_chr19_5686834_5725146	5715643	TAAAAAAA others(13): Show TAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0132	1	386	0.0026	-20	c.430 others(37): Show c.430-1392_430-1373delTTTTTTTTTTTTTTTTTTTT	LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	1/17			chr19	TogoVar
LONP1_chr19_5686834_5725146	5716259	CATATATA others(13): Show CATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02300.hp1 HG04115.hp1 HG01261.hp1 HG02300.hp1 HG04115.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0036 a0001c0001 a0009c0036	a0001c0001t0001 a0009c0036t0001 a0001c0001t0001 a0009c0036t0001	a0001c0001t0001g0295 a0001c0001t0001g0296 a0009c0036t0001g0365 a0001c0001t0001g0295 a0001c0001t0001g0296 a0009c0036t0001g0365	3	386	0.0078	-20	c.430 others(37): Show c.430-2008_430-1989delATATATATATATATATATAT	LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	1/17			chr19	TogoVar
LONRF1_chr8_12716906_12760526	12758791	CTCTCTCT others(13): Show CTCTCTCTCTCTCTCTATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp2 HG01109.hp2 HG01361.hp1 HG01081.hp2 HG01109.hp2 HG01361.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0001 a0001c0001t0001g0088 a0001c0001t0001g0090	3	404	0.0074	-20	c.-33 others(31): Show c.-3391_-3372delTATATAGAGAGAGAGAGAGA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding		3266		chr8	TogoVar
LONRF1_chr8_12716906_12760526	12758793	CTCTCTCT others(13): Show CTCTCTCTCTCTCTATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0089	1	404	0.0025	-20	c.-33 others(31): Show c.-3393_-3374delTATATATAGAGAGAGAGAGA	LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding		3268		chr8	TogoVar
LONRF3_chrX_118969618_119023355	119000775	TTCTCTCT others(13): Show TTCTCTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp1 HG00642.hp1 others(33): Show HG00099.hp1 HG00323.hp1 HG00642.hp1 HG00733.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01257.hp1 HG01981.hp1 HG02027.hp1 HG02135.hp1 HG02451.hp2 HG02630.hp2 HG02698.hp1 HG02735.hp1 HG02896.hp1 HG02965.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03654.hp1 HG03669.hp1 HG04115.hp1 HG04204.hp1 NA18941.hp2 NA18943.hp1 NA18948.hp1 NA18957.hp1 NA18998.hp1 NA19003.hp1 NA19007.hp1 NA19057.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0002c0006	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 a0001c0004t0001 a0002c0006t0001	a0001c0001t0001g0112 a0001c0002t0001g0018 a0001c0002t0001g0019 others(32): Show a0001c0001t0001g0112 a0001c0002t0001g0018 a0001c0002t0001g0019 a0001c0002t0001g0043 a0001c0002t0001g0127 a0001c0002t0001g0130 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0140 a0001c0002t0001g0143 a0001c0002t0001g0145 a0001c0002t0001g0146 a0001c0002t0001g0147 a0001c0002t0001g0148 a0001c0002t0001g0154 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0167 a0001c0002t0001g0169 a0001c0002t0001g0173 a0001c0002t0001g0177 a0001c0003t0001g0118 a0001c0003t0001g0178 a0001c0003t0002g0035 a0001c0003t0002g0036 a0001c0004t0001g0126 a0001c0004t0001g0175 a0001c0004t0001g0200 a0001c0004t0001g0253 a0001c0004t0001g0258 a0002c0006t0001g0019 a0002c0006t0001g0157 a0002c0006t0001g0265	36	309	0.1165	-20	c.141 others(39): Show c.1416-5301_1416-5282delTCTCTCTCTCTCTCTCTCTC	LONRF3	ENSG00000175556.17	transcript	ENST00000371628.8	protein_coding	5/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
LOXHD1_chr18_46472273_46662220	46475547	TGCACACA others(13): Show TGCACACACACTGATGTGTGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG01978.hp1 HG02293.hp2 others(4): Show HG00099.hp2 HG01978.hp1 HG02293.hp2 HG02738.hp1 HG03017.hp1 HG03831.hp1 NA20905.hp2	a0002 a0007 a0010 others(1): Show a0002 a0007 a0010 a0021	a0002c0002 a0002c0069 a0007c0017 others(2): Show a0002c0002 a0002c0069 a0007c0017 a0010c0070 a0021c0040	a0002c0002t0001 a0002c0069t0001 a0007c0017t0002 others(2): Show a0002c0002t0001 a0002c0069t0001 a0007c0017t0002 a0010c0070t0001 a0021c0040t0001	a0002c0002t0001g0134 a0002c0002t0001g0226 a0002c0069t0001g0114 others(4): Show a0002c0002t0001g0134 a0002c0002t0001g0226 a0002c0069t0001g0114 a0007c0017t0002g0004 a0007c0017t0002g0005 a0010c0070t0001g0139 a0021c0040t0001g0159	7	270	0.0259	-20	c.19 others(31): Show c.1905_*1924delGCACACATCAGTGTGTGTGC	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding		1725		chr18	TogoVar
LOXL2_chr8_23291897_23409120	23341532	CTGCACAG others(13): Show CTGCACAGGCCTCGAAATAAA	C C	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA19054.hp2 NA18950.hp1 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0094 a0001c0002t0003g0093 a0001c0001t0001g0094 a0001c0002t0003g0093	2	348	0.0058	-20	c.532 others(35): Show c.532-349_532-330delTTTATTTCGAGGCCTGTGCA	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	3/13			chr8	TogoVar
LOXL2_chr8_23291897_23409120	23383646	GTTTTTTT others(13): Show GTTTTTTTTTTGTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00558.hp2 HG00597.hp2 others(25): Show HG00423.hp1 HG00558.hp2 HG00597.hp2 HG00738.hp1 HG01123.hp1 HG01255.hp2 HG01256.hp1 HG01258.hp1 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01978.hp2 HG02027.hp1 HG02132.hp2 HG02155.hp1 HG02273.hp2 HG02280.hp2 HG02717.hp2 HG02738.hp1 HG03225.hp1 HG03654.hp2 HG03831.hp2 HG03834.hp1 NA18961.hp2 NA18970.hp2 NA18977.hp1 NA19081.hp2 NA19091.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0002 a0001c0017 a0001c0024 others(6): Show a0001c0002 a0001c0017 a0001c0024 a0001c0055 a0002c0004 a0002c0007 a0002c0010 a0002c0030 a0007c0038	a0001c0002t0001 a0001c0017t0001 a0001c0017t0002 others(12): Show a0001c0002t0001 a0001c0017t0001 a0001c0017t0002 a0001c0017t0003 a0001c0024t0001 a0001c0024t0004 a0001c0024t0005 a0001c0055t0001 a0002c0004t0003 a0002c0007t0003 a0002c0007t0004 a0002c0007t0010 a0002c0010t0001 a0002c0030t0004 a0007c0038t0001	a0001c0002t0001g0327 a0001c0017t0001g0069 a0001c0017t0002g0071 others(25): Show a0001c0002t0001g0327 a0001c0017t0001g0069 a0001c0017t0002g0071 a0001c0017t0003g0062 a0001c0024t0001g0073 a0001c0024t0004g0056 a0001c0024t0005g0066 a0001c0055t0001g0067 a0002c0004t0003g0060 a0002c0007t0003g0055 a0002c0007t0003g0058 a0002c0007t0003g0059 a0002c0007t0003g0061 a0002c0007t0003g0063 a0002c0007t0003g0064 a0002c0007t0003g0070 a0002c0007t0003g0072 a0002c0007t0003g0242 a0002c0007t0004g0049 a0002c0007t0004g0051 a0002c0007t0004g0052 a0002c0007t0004g0053 a0002c0007t0004g0054 a0002c0007t0010g0057 a0002c0010t0001g0088 a0002c0030t0004g0065 a0002c0030t0004g0068 a0007c0038t0001g0089	28	348	0.0805	-20	c.-83 others(39): Show c.-83-15232_-83-15213delAAAAAAAAACAAAAAAAAAA	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	1/13			chr8	TogoVar
LPAR1_chr9_110868263_111043470	110892810	AAGGAAGG others(13): Show AAGGAAGGAAGGAAGGAAGGC	A A	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0287 a0001c0001t0002g0287	1	302	0.0033	-20	c.794 others(39): Show c.794-17108_794-17089delGCCTTCCTTCCTTCCTTCCT	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	5/5			chr9	TogoVar
LPAR1_chr9_110868263_111043470	110892814	AAGGAAGG others(13): Show AAGGAAGGAAGGAAGGCAGGC	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0296 a0001c0001t0016g0296	1	302	0.0033	-20	c.794 others(39): Show c.794-17112_794-17093delGCCTGCCTTCCTTCCTTCCT	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	5/5			chr9	TogoVar
LPAR1_chr9_110868263_111043470	110977806	AGGAGGGA others(13): Show AGGAGGGAGGGAGGGCGGGAG	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	302	0.0033	-20	c.-18 others(39): Show c.-181-4268_-181-4249delCTCCCGCCCTCCCTCCCTCC	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5			chr9	TogoVar
LPAR1_chr9_110868263_111043470	110977834	GGGAAGGA others(13): Show GGGAAGGAAGGAGGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp2 NA19075.hp1 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0171 a0001c0001t0002g0220 a0001c0001t0001g0171 a0001c0001t0002g0220	2	302	0.0066	-20	c.-18 others(39): Show c.-181-4296_-181-4277delTTCCTTCCCTCCTTCCTTCC	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5			chr9	TogoVar
LPAR1_chr9_110868263_111043470	110977846	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0001 a0001c0001t0004g0001	1	302	0.0033	-20	c.-18 others(39): Show c.-181-4308_-181-4289delTTCCTTCCTTCCTTCCTTCC	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5			chr9	TogoVar
LPAR1_chr9_110868263_111043470	111009996	AAAATATA others(13): Show AAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG03239.hp1 HG04115.hp2 others(1): Show HG00735.hp2 HG03239.hp1 HG04115.hp2 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0002t0003	a0001c0001t0001g0265 a0001c0001t0004g0207 a0001c0001t0005g0264 others(1): Show a0001c0001t0001g0265 a0001c0001t0004g0207 a0001c0001t0005g0264 a0001c0002t0003g0090	4	302	0.0133	-20	c.-18 others(41): Show c.-182+26106_-182+26125delATATATATATATATATATTT	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5			chr9	TogoVar
LPAR1_chr9_110868263_111043470	111009998	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00558.hp1 HG00609.hp2 others(59): Show HG00438.hp1 HG00558.hp1 HG00609.hp2 HG00639.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01106.hp1 HG01167.hp2 HG01192.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01346.hp2 HG01516.hp2 HG01978.hp2 HG02145.hp2 HG02257.hp2 HG02293.hp1 HG02451.hp2 HG02559.hp1 HG02615.hp1 HG02647.hp1 HG02647.hp2 HG02738.hp1 HG02965.hp1 HG03130.hp1 HG03139.hp1 HG03225.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03710.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18947.hp1 NA18952.hp2 NA18969.hp1 NA18972.hp2 NA18987.hp2 NA19030.hp2 NA19043.hp1 NA19065.hp1 NA19075.hp1 NA19075.hp2 NA19081.hp2 NA19091.hp1 NA20300.hp2 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0023 a0001c0001t0029 a0001c0002t0003	a0001c0001t0001g0074 a0001c0001t0001g0091 a0001c0001t0001g0099 others(59): Show a0001c0001t0001g0074 a0001c0001t0001g0091 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0125 a0001c0001t0001g0132 a0001c0001t0001g0136 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0171 a0001c0001t0001g0192 a0001c0001t0001g0196 a0001c0001t0001g0203 a0001c0001t0001g0221 a0001c0001t0001g0288 a0001c0001t0002g0055 a0001c0001t0002g0145 a0001c0001t0002g0154 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0260 a0001c0001t0002g0279 a0001c0001t0002g0280 a0001c0001t0002g0289 a0001c0001t0004g0103 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0004g0137 a0001c0001t0005g0169 a0001c0001t0005g0206 a0001c0001t0005g0217 a0001c0001t0005g0258 a0001c0001t0007g0214 a0001c0001t0007g0215 a0001c0001t0007g0216 a0001c0001t0008g0174 a0001c0001t0008g0245 a0001c0001t0009g0166 a0001c0001t0009g0208 a0001c0001t0011g0297 a0001c0001t0011g0299 a0001c0001t0011g0300 a0001c0001t0011g0301 a0001c0001t0012g0294 a0001c0001t0012g0295 a0001c0001t0012g0298 a0001c0001t0014g0035 a0001c0001t0014g0218 a0001c0001t0023g0205 a0001c0001t0029g0031 a0001c0002t0003g0093 a0001c0002t0003g0100 a0001c0002t0003g0123 a0001c0002t0003g0153 a0001c0002t0003g0170 a0001c0002t0003g0179 a0001c0002t0003g0180 a0001c0002t0003g0201 a0001c0002t0003g0211	62	302	0.2053	-20	c.-18 others(41): Show c.-182+26104_-182+26123delATATATATATATATATATAT	LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5			chr9	TogoVar
LPA_chr6_160526482_160669275	160665584	CAATAAAA others(13): Show CAATAAAATAAAATAAAATAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0074 a0003c0003t0001g0074	1	148	0.0068	-20	c.-13 others(31): Show c.-1390_-1371delTTATTTTATTTTATTTTATT	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding		1310		chr6	TogoVar
LPCAT1_chr5_1456427_1528960	1482492	AGGCTGGG others(13): Show AGGCTGGGGTGGGGTGGGGTG	A A	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0344 a0001c0003t0001g0344	1	386	0.0026	-20	c.726 others(35): Show c.726+916_726+935delCACCCCACCCCACCCCAGCC	LPCAT1	ENSG00000153395.10	transcript	ENST00000283415.4	protein_coding	6/13			chr5	TogoVar
LPCAT1_chr5_1456427_1528960	1501836	AGCACTGA others(13): Show AGCACTGACCAAGGCTGACCG	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0343 a0001c0004t0002g0343	1	386	0.0026	-20	c.136 others(35): Show c.136-253_136-234delCGGTCAGCCTTGGTCAGTGC	LPCAT1	ENSG00000153395.10	transcript	ENST00000283415.4	protein_coding	1/13			chr5	TogoVar
LPCAT3_chr12_6971185_7023476	6990547	AAATAAAT others(13): Show AAATAAATAAATAAATAAATT	A A	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02818.hp1 HG03486.hp2 others(1): Show HG02559.hp2 HG02818.hp1 HG03486.hp2 NA21309.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0001	a0002c0007t0001g0002 a0002c0007t0001g0011 a0002c0007t0001g0002 a0002c0007t0001g0011	4	282	0.0142	-20	c.152 others(37): Show c.152-7028_152-7009delAATTTATTTATTTATTTATT	LPCAT3	ENSG00000111684.11	transcript	ENST00000261407.9	protein_coding	1/12			chr12	TogoVar
LPCAT3_chr12_6971185_7023476	6997379	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02976.hp2 HG03225.hp1 HG02622.hp2 HG02976.hp2 HG03225.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0218 a0002c0004t0001g0219 a0002c0004t0001g0227 a0002c0004t0001g0218 a0002c0004t0001g0219 a0002c0004t0001g0227	3	282	0.0106	-20	c.152 others(39): Show c.152-13860_152-13841delCACACACACACACACACACA	LPCAT3	ENSG00000111684.11	transcript	ENST00000261407.9	protein_coding	1/12			chr12	TogoVar
LPIN1_chr2_11741632_11832409	11759133	TTTTCTTT others(13): Show TTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03486.hp2 HG02572.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0037 a0001c0001t0002 a0001c0001t0037	a0001c0001t0002g0235 a0001c0001t0037g0236 a0001c0001t0002g0235 a0001c0001t0037g0236	2	278	0.0072	-20	c.-9- others(35): Show c.-9-6360_-9-6341delCTTTCTTTCTTTCTTTCTTT	LPIN1	ENSG00000134324.12	transcript	ENST00000674199.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr2	TogoVar
LPIN2_chr18_2911999_3018144	2956311	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02896.hp1 HG03209.hp2 HG02717.hp2 HG02896.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0036 a0001c0001t0030 a0001c0001t0036	a0001c0001t0030g0183 a0001c0001t0036g0157 a0001c0001t0036g0158 a0001c0001t0030g0183 a0001c0001t0036g0157 a0001c0001t0036g0158	3	380	0.0079	-20	c.193 others(37): Show c.193-1732_193-1713delACACACACACACACACACAC	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	2/19			chr18	TogoVar
LPIN2_chr18_2911999_3018144	3010927	CCATTCAG others(13): Show CCATTCAGGGAAGGTAAGTGA	C C	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0006 a0001c0001t0003g0006	1	380	0.0026	-20	c.-10 others(37): Show c.-10+2140_-10+2159delTCACTTACCTTCCCTGAATG	LPIN2	ENSG00000101577.11	transcript	ENST00000677752.1	protein_coding	1/19			chr18	TogoVar
LPL_chr8_19934253_19972259	19950879	GAGGAAGG others(13): Show GAGGAAGGAAGGAAGGAATGA	G G	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02523.hp1 NA18964.hp2 others(1): Show HG00597.hp2 HG02523.hp1 NA18964.hp2 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0140 a0001c0001t0001g0015 a0001c0001t0001g0140	4	384	0.0104	-20	c.250 others(35): Show c.250-854_250-835delAATGAAGGAAGGAAGGAAGG	LPL	ENSG00000175445.17	transcript	ENST00000650287.1	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr8	TogoVar
LPO_chr17_58233584_58273518	58254132	GATATATA others(13): Show GATATATAGATATATAGATAT	G G	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01168.hp1 HG01169.hp1 others(17): Show HG00597.hp1 HG01168.hp1 HG01169.hp1 HG02015.hp2 HG02109.hp1 HG02622.hp2 HG02818.hp1 HG03130.hp1 HG03225.hp1 HG03486.hp2 NA18522.hp2 NA18942.hp1 NA18947.hp1 NA18981.hp1 NA19054.hp2 NA19065.hp1 NA19078.hp1 NA19082.hp1 NA19240.hp1 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0012 a0002c0003 a0002c0006 a0001c0012 a0002c0003 a0002c0006	a0001c0012t0002 a0002c0003t0001 a0002c0006t0001 a0001c0012t0002 a0002c0003t0001 a0002c0006t0001	a0001c0012t0002g0069 a0001c0012t0002g0070 a0002c0003t0001g0015 others(14): Show a0001c0012t0002g0069 a0001c0012t0002g0070 a0002c0003t0001g0015 a0002c0003t0001g0025 a0002c0003t0001g0026 a0002c0003t0001g0037 a0002c0003t0001g0038 a0002c0003t0001g0043 a0002c0003t0001g0044 a0002c0003t0001g0049 a0002c0003t0001g0050 a0002c0003t0001g0051 a0002c0003t0001g0055 a0002c0003t0001g0156 a0002c0006t0001g0124 a0002c0006t0001g0150 a0002c0006t0001g0161	20	328	0.0610	-20	c.110 others(37): Show c.1106-675_1106-656delTATAGATATATAGATATATA	LPO	ENSG00000167419.11	transcript	ENST00000262290.9	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
LPP_chr3_188149157_188895671	188151851	ATATATAT others(13): Show ATATATATGTATATATATGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp1 HG01358.hp1 HG03130.hp2 others(3): Show HG01074.hp1 HG01358.hp1 HG03130.hp2 HG03195.hp1 HG03453.hp2 NA19043.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0002 a0002c0003 a0002c0004 others(3): Show a0001c0002 a0002c0003 a0002c0004 a0002c0015 a0004c0017 a0007c0013	a0001c0002t0050 a0002c0003t0004 a0002c0004t0012 others(3): Show a0001c0002t0050 a0002c0003t0004 a0002c0004t0012 a0002c0015t0037 a0004c0017t0044 a0007c0013t0003	a0001c0002t0050g0052 a0002c0003t0004g0044 a0002c0004t0012g0040 others(3): Show a0001c0002t0050g0052 a0002c0003t0004g0044 a0002c0004t0012g0040 a0002c0015t0037g0051 a0004c0017t0044g0043 a0007c0013t0003g0046	6	76	0.0790	-20	c.-25 others(31): Show c.-2590_-2571delTATATATGTATATATATGTG	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding		2305		chr3	TogoVar
LPP_chr3_188149157_188895671	188248468	TTATATAT others(13): Show TTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0015 a0003c0009t0015	a0003c0009t0015g0066 a0003c0009t0015g0066	1	76	0.0132	-20	c.-67 others(39): Show c.-67+22952_-67+22971delTATATATATATATATATATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188249829	TACACACA others(13): Show TACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02622.hp2 HG01256.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0051 a0001c0001t0008 a0001c0001t0051	a0001c0001t0008g0065 a0001c0001t0051g0019 a0001c0001t0008g0065 a0001c0001t0051g0019	2	76	0.0263	-20	c.-67 others(39): Show c.-67+24324_-67+24343delCACACACACACACACACACA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188250920	CTCCCTTC others(13): Show CTCCCTTCCCTTCCCTTCCCT	C C	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02622.hp2 HG01256.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0051 a0001c0001t0008 a0001c0001t0051	a0001c0001t0008g0065 a0001c0001t0051g0019 a0001c0001t0008g0065 a0001c0001t0051g0019	2	76	0.0263	-20	c.-67 others(39): Show c.-67+25434_-67+25453delTCCCTTCCCTTCCCTTCCCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188269977	TTTTCTTT others(13): Show TTTTCTTTTCTTTTCTTATCG	T T	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02074.hp2 HG02602.hp2 others(8): Show HG00639.hp1 HG02074.hp2 HG02602.hp2 HG02630.hp1 HG02896.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03453.hp1 HG03704.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0003 others(3): Show a0001c0001 a0001c0002 a0002c0003 a0002c0007 a0002c0008 a0003c0011	a0001c0001t0001 a0001c0001t0017 a0001c0002t0010 others(8): Show a0001c0001t0001 a0001c0001t0017 a0001c0002t0010 a0001c0002t0024 a0002c0003t0009 a0002c0003t0013 a0002c0003t0022 a0002c0003t0029 a0002c0007t0021 a0002c0008t0027 a0003c0011t0004	a0001c0001t0001g0035 a0001c0001t0017g0064 a0001c0002t0010g0025 others(8): Show a0001c0001t0001g0035 a0001c0001t0017g0064 a0001c0002t0010g0025 a0001c0002t0024g0036 a0002c0003t0009g0070 a0002c0003t0013g0027 a0002c0003t0022g0054 a0002c0003t0029g0059 a0002c0007t0021g0063 a0002c0008t0027g0042 a0003c0011t0004g0071	11	76	0.1447	-20	c.-67 others(39): Show c.-67+44467_-67+44486delATCGTTTCTTTTCTTTTCTT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188311471	TCTAAACT others(13): Show TCTAAACTAAACTAAACTAAA	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG03834.hp1 HG03834.hp2 HG00438.hp1 HG03834.hp1 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0049 a0001c0002t0001 a0001c0002t0011 a0001c0001t0049 a0001c0002t0001 a0001c0002t0011	a0001c0001t0049g0031 a0001c0002t0001g0029 a0001c0002t0011g0038 a0001c0001t0049g0031 a0001c0002t0001g0029 a0001c0002t0011g0038	3	76	0.0395	-20	c.-66 others(39): Show c.-66-30151_-66-30132delCTAAACTAAACTAAACTAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188386260	GCGCGCAC others(13): Show GCGCGCACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG03098.hp2 HG02074.hp2 HG03098.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0011 a0001c0002 a0003c0011	a0001c0002t0024 a0003c0011t0004 a0001c0002t0024 a0003c0011t0004	a0001c0002t0024g0036 a0003c0011t0004g0071 a0001c0002t0024g0036 a0003c0011t0004g0071	2	76	0.0263	-20	c.-9- others(37): Show c.-9-19850_-9-19831delGCGCACACACACACACACAC	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188448387	GAGATATC others(13): Show GAGATATCTATATTTAGATAA	G G	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0058 a0001c0002t0058	a0001c0002t0058g0013 a0001c0002t0058g0013	1	76	0.0132	-20	c.194 others(39): Show c.194-36165_194-36146delAAGATATCTATATTTAGATA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188524878	CCCTTCCT others(13): Show CCCTTCCTTCCTTCCGTCCGT	C C	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0040 a0001c0005t0040	a0001c0005t0040g0030 a0001c0005t0040g0030	1	76	0.0132	-20	c.429 others(35): Show c.429+106_429+125delGTCCGTCCTTCCTTCCTTCC	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188524897	GTCCTTCC others(13): Show GTCCTTCCTTCCTTCCTTCCT	G G	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01081.hp2 HG01358.hp1 others(10): Show HG01074.hp2 HG01081.hp2 HG01358.hp1 HG01358.hp2 HG02074.hp1 HG02109.hp1 HG02602.hp2 HG02922.hp2 HG03098.hp2 HG03453.hp1 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0001c0002 a0001c0005 others(5): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0002c0003 a0002c0014 a0003c0011 a0005c0012	a0001c0001t0001 a0001c0001t0005 a0001c0002t0050 others(10): Show a0001c0001t0001 a0001c0001t0005 a0001c0002t0050 a0001c0002t0058 a0001c0005t0030 a0001c0005t0031 a0001c0006t0041 a0002c0003t0002 a0002c0003t0029 a0002c0003t0059 a0002c0014t0065 a0003c0011t0004 a0005c0012t0014	a0001c0001t0001g0035 a0001c0001t0005g0024 a0001c0002t0050g0052 others(10): Show a0001c0001t0001g0035 a0001c0001t0005g0024 a0001c0002t0050g0052 a0001c0002t0058g0013 a0001c0005t0030g0047 a0001c0005t0031g0003 a0001c0006t0041g0002 a0002c0003t0002g0004 a0002c0003t0029g0059 a0002c0003t0059g0011 a0002c0014t0065g0009 a0003c0011t0004g0071 a0005c0012t0014g0045	13	76	0.1711	-20	c.429 others(35): Show c.429+143_429+162delTCCTTCCTTCCTTCCTTCCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188784412	CATATATA others(13): Show CATATATATATATTCCATCAT	C C	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0063 a0001c0005t0063	a0001c0005t0063g0022 a0001c0005t0063g0022	1	76	0.0132	-20	c.141 others(41): Show c.1410+24141_1410+24160delATTCCATCATATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188784604	CATATATA others(13): Show CATATATATATATTCCATCAT	C C	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA19043.hp1 HG03139.hp2 NA19043.hp1	a0002 a0004 a0002 a0004	a0002c0003 a0004c0017 a0002c0003 a0004c0017	a0002c0003t0053 a0004c0017t0044 a0002c0003t0053 a0004c0017t0044	a0002c0003t0053g0010 a0004c0017t0044g0043 a0002c0003t0053g0010 a0004c0017t0044g0043	2	76	0.0263	-20	c.141 others(41): Show c.1410+24333_1410+24352delATTCCATCATATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar

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