Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRRC52_chr1_165539000_165568957	165539058	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00280.hp1 others(196): Show HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01433.hp1 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03239.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp2 NA18941.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18974.hp1 NA18974.hp2 NA18977.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18989.hp2 NA18990.hp1 NA18991.hp1 NA18992.hp1 NA18993.hp2 NA18999.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19006.hp1 NA19006.hp2 NA19011.hp2 NA19043.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19064.hp1 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19082.hp1 NA19084.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp2 NA19091.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0001c0004 others(5): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0002c0003 a0003c0007 a0004c0008	a0001c0001t0001 a0001c0001t0009 a0001c0001t0013 others(11): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0002t0002 a0001c0002t0010 a0001c0004t0008 a0001c0005t0001 a0001c0006t0001 a0002c0003t0006 a0003c0007t0001 a0004c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(81): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0102 a0001c0001t0001g0108 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0118 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0009g0023 a0001c0001t0009g0054 a0001c0001t0009g0055 a0001c0001t0009g0056 a0001c0001t0013g0001 a0001c0001t0015g0001 a0001c0001t0016g0005 a0001c0001t0017g0001 a0001c0002t0002g0008 a0001c0002t0002g0010 a0001c0002t0002g0011 a0001c0002t0002g0024 a0001c0002t0002g0025 a0001c0002t0002g0026 a0001c0002t0002g0028 a0001c0002t0002g0029 a0001c0002t0002g0041 a0001c0002t0002g0049 a0001c0002t0002g0058 a0001c0002t0002g0064 a0001c0002t0002g0065 a0001c0002t0002g0066 a0001c0002t0002g0067 a0001c0002t0002g0070 a0001c0002t0002g0071 a0001c0002t0002g0072 a0001c0002t0002g0074 a0001c0002t0002g0097 a0001c0002t0002g0098 a0001c0002t0002g0113 a0001c0002t0002g0115 a0001c0002t0010g0004 a0001c0002t0010g0100 a0001c0004t0008g0051 a0001c0005t0001g0081 a0001c0006t0001g0001 a0002c0003t0006g0007 a0003c0007t0001g0001 a0004c0008t0001g0006	199	350	0.5686	-20	c.-52 others(31): Show c.-5238_-5219delTGTGTGTGTGTGTGTGTGTG	LRRC52	ENSG00000162763.4	transcript	ENST00000294818.2	protein_coding		4941		chr1	TogoVar
LRRC53_chr1_74464376_74517611	74500603	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01099.hp1 HG02451.hp1 others(12): Show HG00639.hp2 HG01099.hp1 HG02451.hp1 HG02486.hp2 HG02615.hp1 HG02615.hp2 HG02818.hp2 HG02896.hp1 HG03453.hp2 HG03486.hp1 HG04204.hp1 NA18906.hp2 NA19057.hp2 NA19079.hp1 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0003 a0001c0001 a0004c0003	a0001c0001t0001 a0001c0001t0005 a0004c0003t0001 a0001c0001t0001 a0001c0001t0005 a0004c0003t0001	a0001c0001t0001g0016 a0001c0001t0001g0082 a0001c0001t0001g0087 others(11): Show a0001c0001t0001g0016 a0001c0001t0001g0082 a0001c0001t0001g0087 a0001c0001t0001g0190 a0001c0001t0001g0202 a0001c0001t0001g0221 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0258 a0001c0001t0001g0314 a0001c0001t0001g0316 a0001c0001t0001g0323 a0001c0001t0005g0134 a0004c0003t0001g0241	15	342	0.0439	-20	c.-27 others(39): Show c.-27+11903_-27+11922delTTTTTTTTTTTTTTTTTTTT	LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4			chr1	TogoVar
LRRC61_chr7_150318355_150343156	150342603	AGCAACTG others(13): Show AGCAACTGATGTCCAGTGCCG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02717.hp2 HG02818.hp1 others(5): Show HG02280.hp1 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02965.hp2 HG03540.hp1 NA19043.hp1	a0002 a0006 a0002 a0006	a0002c0002 a0006c0008 a0002c0002 a0006c0008	a0002c0002t0008 a0002c0002t0014 a0002c0002t0017 others(1): Show a0002c0002t0008 a0002c0002t0014 a0002c0002t0017 a0006c0008t0013	a0002c0002t0008g0040 a0002c0002t0008g0041 a0002c0002t0008g0042 others(5): Show a0002c0002t0008g0040 a0002c0002t0008g0041 a0002c0002t0008g0042 a0002c0002t0008g0043 a0002c0002t0008g0044 a0002c0002t0014g0046 a0002c0002t0017g0089 a0006c0008t0013g0045	8	386	0.0207	-20	c.49 others(31): Show c.4963_*4982delGCAACTGATGTCCAGTGCCG	LRRC61	ENSG00000127399.15	transcript	ENST00000359623.9	protein_coding		4448		chr7	TogoVar
LRRC63_chr13_46206928_46282115	46211872	TCGCCTCG others(13): Show TCGCCTCGCCTGTCCCGCGCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG02922.hp2 HG03225.hp2 others(3): Show HG02896.hp2 HG02922.hp2 HG03225.hp2 HG03516.hp1 HG03540.hp1 NA18522.hp2	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0002c0002 a0009c0009 a0001c0001 a0002c0002 a0009c0009	a0001c0001t0002 a0002c0002t0002 a0009c0009t0018 a0001c0001t0002 a0002c0002t0002 a0009c0009t0018	a0001c0001t0002g0047 a0001c0001t0002g0048 a0002c0002t0002g0154 others(2): Show a0001c0001t0002g0047 a0001c0001t0002g0048 a0002c0002t0002g0154 a0009c0009t0018g0026 a0009c0009t0018g0153	6	386	0.0155	-20	c.-42 others(29): Show c.-420_-401delCGCCTCGCCTGTCCCGCGCC	LRRC63	ENSG00000173988.14	transcript	ENST00000595396.3	protein_coding		55		chr13	TogoVar
LRRC63_chr13_46206928_46282115	46276826	GTGTATAT others(13): Show GTGTATATATATATATATATA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0058 a0003c0004t0058	a0003c0004t0058g0197 a0003c0004t0058g0197	1	386	0.0026	-20	c.25 others(27): Show c.25_*44delGTATATATATATATATATAT	LRRC63	ENSG00000173988.14	transcript	ENST00000595396.3	protein_coding	10/10	25	INFO_REALIGN_3_PRIME	chr13	TogoVar
LRRC69_chr8_91097619_91224257	91118351	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01256.hp1 HG01891.hp1 others(7): Show HG00423.hp2 HG01256.hp1 HG01891.hp1 HG02486.hp1 HG02572.hp2 HG02698.hp1 HG02818.hp2 HG03098.hp1 HG03834.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0259 a0001c0001t0001g0289 a0001c0001t0001g0290 others(7): Show a0001c0001t0001g0259 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0003t0001g0282 a0001c0003t0001g0283 a0001c0003t0001g0284 a0001c0003t0001g0285 a0001c0003t0001g0286	10	318	0.0315	-20	c.184 others(37): Show c.184-6118_184-6099delAAAAAAAAAAAAAAAAAAAA	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC69_chr8_91097619_91224257	91210562	GACACACA others(13): Show GACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02257.hp2 HG02559.hp1 others(9): Show HG02109.hp1 HG02257.hp2 HG02559.hp1 HG02809.hp1 HG02896.hp2 HG03041.hp1 HG03209.hp1 HG03225.hp1 HG03486.hp2 NA18522.hp2 NA19030.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0001c0001t0002 a0002c0002t0002	a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 others(9): Show a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0181 a0001c0001t0002g0187 a0001c0001t0002g0277 a0001c0001t0002g0281 a0002c0002t0002g0041	12	318	0.0377	-20	c.934 others(37): Show c.934-8314_934-8295delCACACACACACACACACACA	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC74A_chr14_76821408_76875304	76872224	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG03516.hp2 NA20300.hp1 HG02109.hp1 HG03516.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0005 a0002c0002t0001 a0001c0001t0003 a0001c0001t0005 a0002c0002t0001	a0001c0001t0003g0064 a0001c0001t0005g0027 a0002c0002t0001g0035 a0001c0001t0003g0064 a0001c0001t0005g0027 a0002c0002t0001g0035	3	408	0.0074	-20	c.20 others(31): Show c.2076_*2095delTTTTTTTTTTTTTTTTTTTT	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding		1921		chr14	TogoVar
LRRC74B_chr22_21040946_21069168	21052878	TGATGCAG others(13): Show TGATGCAGGGGCTGACCTTGG	T T	intron_variant intron_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0184 a0001c0001t0016g0184	1	454	0.0022	-20	c.733 others(35): Show c.733-480_733-461delATGCAGGGGCTGACCTTGGG	LRRC74B	ENSG00000187905.11	transcript	ENST00000442047.3	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr22	TogoVar
LRRC75A_chr17_16436577_16497193	16449079	TGCTGAGG others(13): Show TGCTGAGGCTTGGATGCAAGC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19007.hp1 HG02145.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0005 a0001c0003t0001 a0001c0001t0005 a0001c0003t0001	a0001c0001t0005g0258 a0001c0003t0001g0281 a0001c0001t0005g0258 a0001c0003t0001g0281	2	342	0.0059	-20	c.376 others(37): Show c.376-1139_376-1120delGCTTGCATCCAAGCCTCAGC	LRRC75A	ENSG00000181350.12	transcript	ENST00000470794.2	protein_coding	2/3			chr17	TogoVar
LRRC75A_chr17_16436577_16497193	16453314	ACACACGC others(13): Show ACACACGCACACACGCACACG	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0097 a0001c0001t0018g0097	1	342	0.0029	-20	c.376 others(37): Show c.376-5374_376-5355delCGTGTGCGTGTGTGCGTGTG	LRRC75A	ENSG00000181350.12	transcript	ENST00000470794.2	protein_coding	2/3			chr17	TogoVar
LRRC75A_chr17_16436577_16497193	16471021	ACATGCCC others(13): Show ACATGCCCATGCGCTTGTGCC	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0154 a0001c0001t0003g0154	1	342	0.0029	-20	c.247 others(37): Show c.247-8655_247-8636delGGCACAAGCGCATGGGCATG	LRRC75A	ENSG00000181350.12	transcript	ENST00000470794.2	protein_coding	1/3			chr17	TogoVar
LRRC7_chr1_69562922_70149364	69608812	GTCTCTCT others(13): Show GTCTCTCTCTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG04115.hp2 NA19004.hp2 HG04115.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0044 a0001c0001t0022 a0001c0001t0044	a0001c0001t0022g0088 a0001c0001t0044g0083 a0001c0001t0022g0088 a0001c0001t0044g0083	2	108	0.0185	-20	c.2+4 others(35): Show c.2+40207_2+40226delCTCTCTCTCTCTCTCTCTCT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69608848	CTCTCTCT others(13): Show CTCTCTCTCTCTCTCTCTCTA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0078 a0001c0001t0046g0078	1	108	0.0093	-20	c.2+4 others(35): Show c.2+40209_2+40228delCTCTCTCTCTCTCTCTCTAT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69608852	CTCTCTCT others(13): Show CTCTCTCTCTCTCTCTATATA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01167.hp2 HG03710.hp2 others(1): Show HG00738.hp1 HG01167.hp2 HG03710.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0035 a0001c0001t0070 a0001c0001t0078 others(1): Show a0001c0001t0035 a0001c0001t0070 a0001c0001t0078 a0001c0003t0084	a0001c0001t0035g0020 a0001c0001t0070g0064 a0001c0001t0078g0076 others(1): Show a0001c0001t0035g0020 a0001c0001t0070g0064 a0001c0001t0078g0076 a0001c0003t0084g0037	4	108	0.0370	-20	c.2+4 others(35): Show c.2+40213_2+40232delCTCTCTCTCTCTCTATATAT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69608854	CTCTCTCT others(13): Show CTCTCTCTCTCTCTATATATA	C C	intron_variant intron_variant	MODIFIER	HG02735.hp1 NA18974.hp1 HG02735.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0067 a0001c0001t0073 a0001c0001t0067 a0001c0001t0073	a0001c0001t0067g0075 a0001c0001t0073g0066 a0001c0001t0067g0075 a0001c0001t0073g0066	2	108	0.0185	-20	c.2+4 others(35): Show c.2+40215_2+40234delCTCTCTCTCTCTATATATAT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69608856	CTCTCTCT others(13): Show CTCTCTCTCTCTATATATATA	C C	intron_variant intron_variant	MODIFIER	HG03704.hp1 NA18968.hp2 NA20905.hp1 HG03704.hp1 NA18968.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0037 a0001c0001t0072 a0001c0005t0075 a0001c0001t0037 a0001c0001t0072 a0001c0005t0075	a0001c0001t0037g0016 a0001c0001t0072g0062 a0001c0005t0075g0063 a0001c0001t0037g0016 a0001c0001t0072g0062 a0001c0005t0075g0063	3	108	0.0278	-20	c.2+4 others(35): Show c.2+40217_2+40236delCTCTCTCTCTATATATATAT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69608860	CTCTCTCT others(13): Show CTCTCTCTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0008 a0008	a0008c0016 a0008c0016	a0008c0016t0065 a0008c0016t0065	a0008c0016t0065g0052 a0008c0016t0065g0052	1	108	0.0093	-20	c.2+4 others(35): Show c.2+40221_2+40240delCTCTCTATATATATATATAT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69717757	TGAAAAAA others(13): Show TGAAAAAAAGAAAAAAAGAAA	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02622.hp2 HG00621.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0029 a0001c0004t0049 a0001c0001t0029 a0001c0004t0049	a0001c0001t0029g0019 a0001c0004t0049g0033 a0001c0001t0029g0019 a0001c0004t0049g0033	2	108	0.0185	-20	c.100 others(39): Show c.100+39284_100+39303delAAAAGAAAAAAAGAAAGAAA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69717770	AAAAGAAA others(13): Show AAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG04184.hp1 NA20752.hp1 HG04184.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0083 a0001c0001t0038 a0001c0001t0083	a0001c0001t0038g0001 a0001c0001t0083g0044 a0001c0001t0038g0001 a0001c0001t0083g0044	2	108	0.0185	-20	c.100 others(39): Show c.100+39344_100+39363delGAAAGAAAGAAAGAAAGAAA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69939011	ATATCTAT others(13): Show ATATCTATATATATATATATC	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0029 a0001c0001t0026g0029	1	108	0.0093	-20	c.711 others(37): Show c.711+7445_711+7464delCTATATATATATATATCTAT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	8/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69939027	ATATCTAT others(13): Show ATATCTATATATATCTATATC	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02970.hp2 HG00738.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0046 a0001c0001t0013 a0001c0001t0046	a0001c0001t0013g0084 a0001c0001t0046g0078 a0001c0001t0013g0084 a0001c0001t0046g0078	2	108	0.0185	-20	c.711 others(37): Show c.711+7463_711+7482delATATATATCTATATCTATCT	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	8/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8A_chr9_128877133_128923039	128898039	AGTGTGTG others(13): Show AGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG04115.hp1 HG04228.hp1 HG02027.hp2 HG04115.hp1 HG04228.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0035 a0001c0004t0004g0279 a0001c0004t0004g0035 a0001c0004t0004g0279	3	344	0.0087	-20	c.-8- others(35): Show c.-8-9089_-8-9070delGTGTGTGTGTGTGTGTGTGT	LRRC8A	ENSG00000136802.12	transcript	ENST00000372600.9	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr9	TogoVar
LRRC8B_chr1_89519829_89602861	89541710	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03654.hp2 NA18997.hp2 HG03654.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0003 a0001c0001t0005 a0001c0002t0003	a0001c0001t0005g0265 a0001c0002t0003g0193 a0001c0001t0005g0265 a0001c0002t0003g0193	2	324	0.0062	-20	c.-24 others(41): Show c.-241+16708_-241+16727delAAAAAAAAAAAAAAAAAAAA	LRRC8B	ENSG00000197147.15	transcript	ENST00000330947.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC9_chr14_59915144_60071817	59965882	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01993.hp1 NA19079.hp2 HG01993.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0015 a0001c0001t0003 a0001c0001t0015	a0001c0001t0003g0101 a0001c0001t0015g0096 a0001c0001t0003g0101 a0001c0001t0015g0096	2	322	0.0062	-20	c.121 others(37): Show c.1212-688_1212-669delAAAAAAAAAAAAAAAAAAAA	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding	10/32		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRD1_chr7_92139842_92184142	92174470	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0259 a0005c0005t0001g0259	1	360	0.0028	-20	c.-75 others(37): Show c.-75+4517_-75+4536delATATATATATATATATATAT	LRRD1	ENSG00000240720.10	transcript	ENST00000458448.6	protein_coding	1/5			chr7	TogoVar
LRRFIP2_chr3_37047626_37179582	37088799	TAAAAAAA others(13): Show TAAAAAAAAATTTTAAATAAA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02280.hp1 HG02809.hp2 others(5): Show HG02257.hp1 HG02280.hp1 HG02809.hp2 HG02922.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 NA18906.hp1	a0001 a0011 a0001 a0011	a0001c0001 a0011c0015 a0001c0001 a0011c0015	a0001c0001t0003 a0011c0015t0003 a0001c0001t0003 a0011c0015t0003	a0001c0001t0003g0195 a0001c0001t0003g0196 a0001c0001t0003g0197 others(5): Show a0001c0001t0003g0195 a0001c0001t0003g0196 a0001c0001t0003g0197 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0011c0015t0003g0112	8	268	0.0299	-20	c.110 others(39): Show c.1107+2648_1107+2667delTTTATTTAAAATTTTTTTTT	LRRFIP2	ENSG00000093167.18	transcript	ENST00000336686.9	protein_coding	18/27			chr3	TogoVar
LRRIQ1_chr12_85031351_85250105	85217500	ATATATAT others(13): Show ATATATATATGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0015 a0015	a0015c0017 a0015c0017	a0015c0017t0001 a0015c0017t0001	a0015c0017t0001g0003 a0015c0017t0001g0003	1	228	0.0044	-20	c.482 others(41): Show c.4823-12015_4823-11996delATATATATGTGTGTGTGTGT	LRRIQ1	ENSG00000133640.20	transcript	ENST00000393217.7	protein_coding	24/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRIQ1_chr12_85031351_85250105	85217504	ATATATGT others(13): Show ATATATGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 NA21309.hp1 HG02965.hp1 NA21309.hp1	a0001 a0016 a0001 a0016	a0001c0001 a0016c0022 a0001c0001 a0016c0022	a0001c0001t0001 a0016c0022t0001 a0001c0001t0001 a0016c0022t0001	a0001c0001t0001g0085 a0016c0022t0001g0080 a0001c0001t0001g0085 a0016c0022t0001g0080	2	228	0.0088	-20	c.482 others(41): Show c.4823-12011_4823-11992delATATGTGTGTGTGTGTGTGT	LRRIQ1	ENSG00000133640.20	transcript	ENST00000393217.7	protein_coding	24/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRIQ3_chr1_74021015_74203176	74060186	TTTTTCTT others(13): Show TTTTTCTTCTTCTTCTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0064 a0001c0001t0002g0064	1	274	0.0037	-20	c.997 others(39): Show c.997+14455_997+14474delGAAGAAGAAGAAGAAGAAAA	LRRIQ3	ENSG00000162620.16	transcript	ENST00000354431.9	protein_coding	6/7			chr1	TogoVar
LRRIQ3_chr1_74021015_74203176	74154240	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02970.hp2 HG03516.hp2 HG01192.hp1 HG02970.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0230 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0230 a0001c0001t0001g0248 a0001c0001t0001g0249	3	274	0.0110	-20	c.707 others(37): Show c.707+1473_707+1492delTTTTTTTTTTTTTTTTTTTT	LRRIQ3	ENSG00000162620.16	transcript	ENST00000354431.9	protein_coding	4/7			chr1	TogoVar
LRRIQ4_chr3_169807870_169842773	169831261	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG02055.hp2 others(2): Show HG01167.hp2 HG01169.hp2 HG02055.hp2 HG03130.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0363 a0001c0001t0001g0364 a0001c0001t0001g0365 others(2): Show a0001c0001t0001g0363 a0001c0001t0001g0364 a0001c0001t0001g0365 a0001c0001t0001g0366 a0001c0001t0001g0367	5	386	0.0130	-20	c.133 others(37): Show c.1333+642_1333+661delTTTTTTTTTTTTTTTTTTTT	LRRIQ4	ENSG00000188306.7	transcript	ENST00000340806.7	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRIQ4_chr3_169807870_169842773	169831440	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01952.hp2 HG03239.hp1 others(4): Show HG01175.hp1 HG01952.hp2 HG03239.hp1 HG03688.hp1 HG03704.hp1 HG03942.hp1 HG04184.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0236 a0003c0004t0001g0021 a0003c0004t0001g0022 others(4): Show a0001c0001t0001g0236 a0003c0004t0001g0021 a0003c0004t0001g0022 a0003c0004t0001g0023 a0003c0004t0001g0024 a0003c0004t0001g0025 a0003c0004t0001g0029	7	386	0.0181	-20	c.133 others(37): Show c.1333+834_1333+853delTTTTTTTTTTTTTTTTTTTT	LRRIQ4	ENSG00000188306.7	transcript	ENST00000340806.7	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRK1_chr15_100914357_101083257	101008157	AAAAAAAA others(13): Show AAAAAAAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0212 a0001c0007t0212	a0001c0007t0212g0075 a0001c0007t0212g0075	1	338	0.0030	-20	c.763 others(35): Show c.763-678_763-659delAAAAAAAAAAAAAAAAAAGA	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	6/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRK1_chr15_100914357_101083257	101067421	ATGTGTGT others(13): Show ATGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0253 a0001c0006t0253	a0001c0006t0253g0163 a0001c0006t0253g0163	1	338	0.0030	-20	c.587 others(37): Show c.5870+704_5870+723delGTGTGTGTGTGTGTGTGTGT	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	33/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRK2_chr12_40219997_40374285	40282009	GCTTCCCT others(13): Show GCTTCCCTTCCCTTCCCTTCC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00738.hp2 HG00741.hp2 others(25): Show HG00099.hp1 HG00738.hp2 HG00741.hp2 HG01175.hp2 HG01261.hp2 HG01361.hp2 HG01433.hp1 HG01993.hp1 HG02145.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp2 HG02602.hp2 HG02976.hp1 NA18906.hp1 NA18942.hp2 NA18988.hp1 NA18993.hp1 NA18994.hp2 NA18995.hp2 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19054.hp1 NA19077.hp1 NA19091.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0006 a0008 a0010 a0012 a0021	a0001c0003 a0001c0020 a0001c0037 others(9): Show a0001c0003 a0001c0020 a0001c0037 a0001c0050 a0002c0001 a0003c0014 a0003c0025 a0006c0010 a0008c0015 a0010c0019 a0012c0027 a0021c0028	a0001c0003t0002 a0001c0003t0003 a0001c0020t0005 others(11): Show a0001c0003t0002 a0001c0003t0003 a0001c0020t0005 a0001c0037t0003 a0001c0050t0003 a0002c0001t0001 a0003c0014t0010 a0003c0025t0001 a0006c0010t0002 a0008c0015t0006 a0010c0019t0001 a0010c0019t0013 a0012c0027t0001 a0021c0028t0005	a0001c0003t0002g0157 a0001c0003t0003g0156 a0001c0003t0003g0172 others(25): Show a0001c0003t0002g0157 a0001c0003t0003g0156 a0001c0003t0003g0172 a0001c0003t0003g0182 a0001c0003t0003g0183 a0001c0003t0003g0184 a0001c0003t0003g0190 a0001c0003t0003g0191 a0001c0003t0003g0193 a0001c0003t0003g0278 a0001c0020t0005g0147 a0001c0037t0003g0285 a0001c0050t0003g0192 a0002c0001t0001g0020 a0002c0001t0001g0028 a0002c0001t0001g0046 a0003c0014t0010g0164 a0003c0014t0010g0168 a0003c0014t0010g0173 a0003c0025t0001g0141 a0003c0025t0001g0142 a0006c0010t0002g0375 a0008c0015t0006g0316 a0010c0019t0001g0026 a0010c0019t0013g0311 a0012c0027t0001g0145 a0021c0028t0005g0148 a0021c0028t0005g0151	28	382	0.0733	-20	c.224 others(39): Show c.2242-1806_2242-1787delCCTTCCCTTCCCTTCCCTTC	LRRK2	ENSG00000188906.17	transcript	ENST00000298910.12	protein_coding	18/50		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRN1_chr3_3794431_3854834	3834525	GATATATA others(13): Show GATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03098.hp2 HG03139.hp1 others(3): Show HG02886.hp1 HG03098.hp2 HG03139.hp1 HG03225.hp2 HG03486.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0033 a0001c0001t0040 others(3): Show a0001c0001t0007 a0001c0001t0033 a0001c0001t0040 a0001c0001t0051 a0001c0001t0053 a0001c0001t0079	a0001c0001t0007g0099 a0001c0001t0033g0301 a0001c0001t0040g0185 others(3): Show a0001c0001t0007g0099 a0001c0001t0033g0301 a0001c0001t0040g0185 a0001c0001t0051g0148 a0001c0001t0053g0066 a0001c0001t0079g0391	6	422	0.0142	-20	c.-27 others(39): Show c.-278-9830_-278-9811delATATATATATATATATATAT	LRRN1	ENSG00000175928.6	transcript	ENST00000319331.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRN2_chr1_204612170_204690738	204637645	CGTGTGTG others(13): Show CGTGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0218 a0001c0001t0012g0218	1	328	0.0031	-20	c.-22 others(41): Show c.-226-17447_-226-17428delACACACACACACACACACAC	LRRN2	ENSG00000170382.12	transcript	ENST00000367177.4	protein_coding	1/1			chr1	TogoVar
LRRN4_chr20_6035546_6059060	6039261	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18980.hp1 NA18980.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0004 a0003c0003t0002g0004	1	402	0.0025	-20	c.17 others(31): Show c.1741_*1760delCACACACACACACACACACA	LRRN4	ENSG00000125872.9	transcript	ENST00000378858.5	protein_coding		1284		chr20	TogoVar
LRRN4_chr20_6035546_6059060	6047449	CACACACA others(13): Show CACACACACACACACACACAG	C C	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0063 a0003c0003t0002g0063	1	402	0.0025	-20	c.861 others(37): Show c.861-2789_861-2770delCTGTGTGTGTGTGTGTGTGT	LRRN4	ENSG00000125872.9	transcript	ENST00000378858.5	protein_coding	3/4			chr20	TogoVar
LRRTM1_chr2_80296878_80309752	80300279	GGGGTGTG others(13): Show GGGGTGTGTGTGTGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	418	0.0024	-20	c.19 others(31): Show c.1952_*1971delACACACACACACACACACCC	LRRTM1	ENSG00000162951.11	transcript	ENST00000295057.4	protein_coding		1598		chr2	TogoVar
LRRTM2_chr5_138863921_138880335	138866273	CATTTATT others(13): Show CATTTATTTATTTATTTATTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG01167.hp1 HG01243.hp2 others(8): Show HG00741.hp2 HG01167.hp1 HG01243.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp2 HG02717.hp1 HG02818.hp1 HG02895.hp2 HG02965.hp2 HG03225.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0007 a0001c0001t0015 a0001c0001t0041 others(3): Show a0001c0001t0007 a0001c0001t0015 a0001c0001t0041 a0001c0001t0045 a0001c0001t0049 a0002c0007t0061	a0001c0001t0007g0006 a0001c0001t0015g0031 a0001c0001t0041g0049 others(3): Show a0001c0001t0007g0006 a0001c0001t0015g0031 a0001c0001t0041g0049 a0001c0001t0045g0053 a0001c0001t0049g0070 a0002c0007t0061g0066	11	364	0.0302	-20	c.67 others(31): Show c.6717_*6736delAAATAAATAAATAAATAAAT	LRRTM2	ENSG00000146006.8	transcript	ENST00000274711.7	protein_coding		2647		chr5	TogoVar
LRRTM3_chr10_66921036_67106551	67079858	AACACACA others(13): Show AACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0227 a0001c0001t0001g0227	1	294	0.0034	-20	c.153 others(41): Show c.1537-17697_1537-17678delCACACACACACACACACACA	LRRTM3	ENSG00000198739.11	transcript	ENST00000361320.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRTM4_chr2_76742685_77527376	76792666	TACTAGAT others(13): Show TACTAGATGAAGACCCTCTTA	T T	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	128	0.0078	-20	c.155 others(41): Show c.1552-43770_1552-43751delTAAGAGGGTCTTCATCTAGT	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRRTM4_chr2_76742685_77527376	76929925	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0108 a0001c0001t0003g0108	1	128	0.0078	-20	c.155 others(43): Show c.1552-181029_1552-181010delCACACACACACACACACACA	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRRTM4_chr2_76742685_77527376	76968340	GTATATAT others(13): Show GTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0019 a0001c0001t0002g0019	1	128	0.0078	-20	c.155 others(43): Show c.1552-219444_1552-219425delTATATATATATATATATATA	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRRTM4_chr2_76742685_77527376	77276686	CATATATA others(13): Show CATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0021 a0001c0001t0002g0021	1	128	0.0078	-20	c.155 others(43): Show c.1551+241612_1551+241631delATATATATATATATATATAT	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRRTM4_chr2_76742685_77527376	77457000	GTGTGTAT others(13): Show GTGTGTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA18983.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	1	128	0.0078	-20	c.155 others(41): Show c.1551+61298_1551+61317delTATATATATATATATACACA	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRRTM4_chr2_76742685_77527376	77477903	AAAAGAAA others(13): Show AAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02258.hp1 HG02258.hp2 others(7): Show HG01192.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG03098.hp1 HG03098.hp2 HG03486.hp1 NA18950.hp2 NA18953.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0038 others(7): Show a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0038 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0116 a0001c0001t0002g0119 a0001c0001t0003g0090	10	128	0.0781	-20	c.155 others(41): Show c.1551+40395_1551+40414delCTTTCTTTCTTTCTTTCTTT	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRSAM1_chr9_127446510_127508499	127466496	ATATATAT others(13): Show ATATATATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18956.hp2 NA18956.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0211 a0001c0001t0001g0211	1	340	0.0029	-20	c.529 others(37): Show c.529-1242_529-1223delATATATATTTTTTTTTTTTT	LRSAM1	ENSG00000148356.15	transcript	ENST00000300417.11	protein_coding	9/25		INFO_REALIGN_3_PRIME	chr9	TogoVar

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