Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
MRPL53_chr2_74466982_74477680	74476044	AACACACA others(13): Show AACACACACACACACACACAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	384	0.0026	-20	c.-34 others(31): Show c.-3404_-3385delGTGTGTGTGTGTGTGTGTGT	MRPL53	ENSG00000204822.7	transcript	ENST00000258105.8	protein_coding		3365		chr2	TogoVar
MRPS23_chr17_57829781_57855044	57842887	TATATACA others(13): Show TATATACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0223 a0001c0001t0005g0223	1	396	0.0025	-20	c.216 others(37): Show c.216-1647_216-1628delGTGTGTGTGTGTGTGTATAT	MRPS23	ENSG00000181610.13	transcript	ENST00000313608.13	protein_coding	2/4			chr17	TogoVar
MRPS28_chr8_79913717_80035259	79991909	GCTCTCTC others(13): Show GCTCTCTCTCTCTCTCTCTCT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00408.hp1 others(109): Show HG00099.hp2 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00609.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01106.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG01993.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02080.hp2 HG02132.hp2 HG02135.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02523.hp2 HG02602.hp2 HG02647.hp1 HG02698.hp2 HG02735.hp1 HG02735.hp2 HG02896.hp2 HG02970.hp1 HG03017.hp1 HG03041.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03490.hp2 HG03654.hp1 HG03688.hp2 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04184.hp1 NA18612.hp1 NA18939.hp1 NA18942.hp2 NA18943.hp2 NA18947.hp2 NA18948.hp2 NA18949.hp1 NA18956.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18962.hp2 NA18965.hp1 NA18969.hp1 NA18970.hp2 NA18972.hp1 NA18977.hp2 NA18978.hp2 NA18981.hp2 NA18983.hp2 NA18985.hp2 NA18998.hp2 NA19003.hp2 NA19009.hp2 NA19011.hp2 NA19043.hp2 NA19057.hp1 NA19063.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19088.hp1 NA20129.hp2 NA20300.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0001 a0006c0006t0001 a0001c0001t0001 a0006c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 others(108): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0109 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0212 a0001c0001t0001g0234 a0001c0001t0001g0260 a0006c0006t0001g0002	112	300	0.3733	-20	c.395 others(39): Show c.395+11070_395+11089delAGAGAGAGAGAGAGAGAGAG	MRPS28	ENSG00000147586.10	transcript	ENST00000276585.9	protein_coding	2/2			chr8	TogoVar
MRPS31_chr13_40724128_40776190	40762782	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01884.hp2 HG02109.hp1 others(9): Show HG00544.hp2 HG01884.hp2 HG02109.hp1 HG02258.hp2 HG02647.hp1 HG02897.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03579.hp1 HG04204.hp1 NA18950.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0102 a0001c0001t0001g0113 a0001c0001t0001g0118 others(8): Show a0001c0001t0001g0102 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0190 a0001c0001t0001g0202 a0001c0001t0001g0221 a0001c0001t0001g0290 a0001c0002t0001g0011 a0001c0002t0001g0068	12	404	0.0297	-20	c.441 others(37): Show c.441-3696_441-3677delCACACACACACACACACACA	MRPS31	ENSG00000102738.8	transcript	ENST00000323563.8	protein_coding	2/6			chr13	TogoVar
MRPS35_chr12_27705832_27761295	27732987	GATATATA others(13): Show GATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG02895.hp1 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0169 a0001c0001t0001g0170	2	358	0.0056	-20	c.523 others(37): Show c.523-2425_523-2406delATATATATATATATATATAT	MRPS35	ENSG00000061794.13	transcript	ENST00000081029.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
MRRF_chr9_122259882_122336337	122325631	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01081.hp2 HG01257.hp2 NA18950.hp2 others(1): Show HG01081.hp2 HG01257.hp2 NA18950.hp2 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0080 a0001c0001t0081 others(1): Show a0001c0001t0033 a0001c0001t0080 a0001c0001t0081 a0001c0001t0082	a0001c0001t0033g0235 a0001c0001t0080g0098 a0001c0001t0081g0060 others(1): Show a0001c0001t0033g0235 a0001c0001t0080g0098 a0001c0001t0081g0060 a0001c0001t0082g0003	4	264	0.0152	-20	c.30 others(31): Show c.3049_*3068delGTGTGTGTGTGTGTGTGTGT	MRRF	ENSG00000148187.18	transcript	ENST00000344641.8	protein_coding	7/7	3049	INFO_REALIGN_3_PRIME	chr9	TogoVar
MRTFA_chr22_40405289_40641719	40470229	TTTTATAT others(13): Show TTTTATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02155.hp2 NA18949.hp2 NA18950.hp1 others(10): Show HG02155.hp2 NA18949.hp2 NA18950.hp1 NA18961.hp1 NA18970.hp2 NA18984.hp1 NA18994.hp1 NA19000.hp2 NA19003.hp1 NA19064.hp2 NA19077.hp1 NA19083.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0025 a0001c0001t0002g0032 others(10): Show a0001c0001t0002g0001 a0001c0001t0002g0025 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0063	13	256	0.0508	-20	c.242 others(37): Show c.242-6963_242-6944delTATATATATATATATATAAA	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	3/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40470231	TTATATAT others(13): Show TTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01358.hp2 HG01515.hp2 others(4): Show HG00741.hp1 HG01358.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG03540.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0007 others(1): Show a0001c0001 a0001c0003 a0001c0007 a0001c0014	a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 a0001c0014t0001	a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0083 others(4): Show a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0083 a0001c0003t0001g0067 a0001c0007t0001g0069 a0001c0007t0001g0247 a0001c0014t0001g0077	7	256	0.0273	-20	c.242 others(37): Show c.242-6965_242-6946delTATATATATATATATATATA	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	3/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40569716	AATACATA others(13): Show AATACATACATACATACATAC	A A	intron_variant intron_variant	MODIFIER	HG04115.hp2 NA18950.hp1 HG04115.hp2 NA18950.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0002 a0001c0006t0001 a0001c0001t0002 a0001c0006t0001	a0001c0001t0002g0041 a0001c0006t0001g0113 a0001c0001t0002g0041 a0001c0006t0001g0113	2	256	0.0078	-20	c.-21 others(39): Show c.-21-17369_-21-17350delGTATGTATGTATGTATGTAT	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	2/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFA_chr22_40405289_40641719	40617160	AGGAGGGA others(13): Show AGGAGGGAAGGAGGGAAGGAG	A A	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0033 a0001c0001t0002g0033	1	256	0.0039	-20	c.-84 others(39): Show c.-84+19298_-84+19317delCTCCTTCCCTCCTTCCCTCC	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	1/14		WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MRTFB_chr16_14066319_14271773	14090879	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG03041.hp1 HG01884.hp2 HG01891.hp2 HG03041.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0085 a0001c0003t0003g0086 a0001c0003t0003g0087 a0001c0003t0003g0085 a0001c0003t0003g0086 a0001c0003t0003g0087	3	240	0.0125	-20	c.-64 others(39): Show c.-64+11548_-64+11567delGTGTGTGTGTGTGTGTGTGT	MRTFB	ENSG00000186260.17	transcript	ENST00000571589.6	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
MRTFB_chr16_14066319_14271773	14127923	ATATATAT others(13): Show ATATATATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG03139.hp1 HG02055.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0228 a0001c0001t0010g0229 a0001c0001t0010g0228 a0001c0001t0010g0229	2	240	0.0083	-20	c.-63 others(39): Show c.-63-12619_-63-12600delATATATTTTTTTTTTTTTTT	MRTFB	ENSG00000186260.17	transcript	ENST00000571589.6	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
MS4A14_chr11_60391459_60422756	60418989	ATATATAT others(13): Show ATATATATATATATATGTATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG01071.hp1 HG01358.hp1 others(9): Show HG00741.hp1 HG01071.hp1 HG01358.hp1 HG02602.hp1 NA18949.hp2 NA18952.hp1 NA18953.hp1 NA18955.hp2 NA18961.hp2 NA18971.hp1 NA18982.hp2 NA18992.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0017 a0002c0002t0001g0022 others(4): Show a0002c0002t0001g0002 a0002c0002t0001g0017 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0110 a0002c0002t0001g0147 a0002c0002t0001g0148	12	428	0.0280	-20	c.19 others(31): Show c.1982_*2001delTATATATATATATATGTATG	MS4A14	ENSG00000166928.11	transcript	ENST00000300187.11	protein_coding		1234		chr11	TogoVar
MS4A14_chr11_60391459_60422756	60419015	ATATATAT others(13): Show ATATATATATATATATGTATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02129.hp2 HG03834.hp1 NA18985.hp1 others(1): Show HG02129.hp2 HG03834.hp1 NA18985.hp1 NA18994.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0002c0002 a0001c0005 a0002c0002	a0001c0005t0001 a0002c0002t0001 a0001c0005t0001 a0002c0002t0001	a0001c0005t0001g0076 a0002c0002t0001g0002 a0002c0002t0001g0007 others(1): Show a0001c0005t0001g0076 a0002c0002t0001g0002 a0002c0002t0001g0007 a0002c0002t0001g0017	4	428	0.0094	-20	c.20 others(31): Show c.2008_*2027delTATATATATATATATGTATG	MS4A14	ENSG00000166928.11	transcript	ENST00000300187.11	protein_coding		1260		chr11	TogoVar
MS4A14_chr11_60391459_60422756	60421415	TAGATGAT others(13): Show TAGATGATAGATAGATAGATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02647.hp2 HG03130.hp2 others(2): Show HG01884.hp2 HG02647.hp2 HG03130.hp2 HG03139.hp2 NA18946.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0010 a0001c0001 a0002c0002 a0006c0010	a0001c0001t0001 a0002c0002t0004 a0006c0010t0001 a0001c0001t0001 a0002c0002t0004 a0006c0010t0001	a0001c0001t0001g0074 a0002c0002t0004g0046 a0002c0002t0004g0133 others(1): Show a0001c0001t0001g0074 a0002c0002t0004g0046 a0002c0002t0004g0133 a0006c0010t0001g0029	5	428	0.0117	-20	c.44 others(31): Show c.4408_*4427delAGATGATAGATAGATAGATA	MS4A14	ENSG00000166928.11	transcript	ENST00000300187.11	protein_coding		3660		chr11	TogoVar
MS4A14_chr11_60391459_60422756	60421423	AGATAGAT others(13): Show AGATAGATAGATAGATAGATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00733.hp2 HG00738.hp1 others(60): Show HG00423.hp1 HG00733.hp2 HG00738.hp1 HG01069.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp2 HG01258.hp2 HG01934.hp2 HG02109.hp1 HG02109.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02451.hp2 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03195.hp1 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03491.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03710.hp2 HG03927.hp2 HG04115.hp1 NA18522.hp1 NA18945.hp1 NA18950.hp1 NA18950.hp2 NA18960.hp2 NA18961.hp1 NA18965.hp1 NA18968.hp1 NA18973.hp1 NA18981.hp2 NA18985.hp2 NA18991.hp1 NA18993.hp1 NA18998.hp2 NA18999.hp2 NA19003.hp2 NA19010.hp2 NA19054.hp1 NA19058.hp1 NA19059.hp2 NA19064.hp2 NA19067.hp1 NA19086.hp2 NA19089.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0010 a0012	a0001c0001 a0001c0009 a0002c0002 others(5): Show a0001c0001 a0001c0009 a0002c0002 a0003c0004 a0004c0006 a0004c0011 a0010c0024 a0012c0025	a0001c0001t0001 a0001c0009t0001 a0002c0002t0001 others(6): Show a0001c0001t0001 a0001c0009t0001 a0002c0002t0001 a0002c0002t0002 a0003c0004t0001 a0004c0006t0001 a0004c0011t0001 a0010c0024t0005 a0012c0025t0002	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0011 others(34): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0092 a0001c0001t0001g0106 a0001c0001t0001g0112 a0001c0009t0001g0032 a0002c0002t0001g0042 a0002c0002t0002g0021 a0002c0002t0002g0128 a0002c0002t0002g0129 a0002c0002t0002g0158 a0003c0004t0001g0018 a0003c0004t0001g0057 a0003c0004t0001g0161 a0004c0006t0001g0016 a0004c0006t0001g0056 a0004c0006t0001g0109 a0004c0006t0001g0157 a0004c0011t0001g0045 a0010c0024t0005g0154 a0012c0025t0002g0153	63	428	0.1472	-20	c.44 others(31): Show c.4416_*4435delGATAGATAGATAGATAGATT	MS4A14	ENSG00000166928.11	transcript	ENST00000300187.11	protein_coding		3668		chr11	TogoVar
MS4A3_chr11_60051665_60076115	60058506	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	408	0.0025	-20	c.-16 others(37): Show c.-16+1783_-16+1802delAAAAAAAAAAAAAAAAAAAA	MS4A3	ENSG00000149516.15	transcript	ENST00000278865.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A4A_chr11_60275666_60313970	60289575	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01358.hp2 HG02818.hp2 others(7): Show HG00323.hp1 HG01358.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp1 HG03239.hp2 HG03471.hp1 HG03540.hp1 HG03579.hp2 HG06807.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0042 a0003c0003t0002g0045 a0003c0003t0002g0046 others(4): Show a0003c0003t0002g0042 a0003c0003t0002g0045 a0003c0003t0002g0046 a0003c0003t0002g0220 a0003c0003t0002g0221 a0003c0003t0002g0222 a0003c0003t0002g0287	10	430	0.0233	-20	c.42- others(35): Show c.42-2630_42-2611delATGTGTGTGTGTGTGTGTGT	MS4A4A	ENSG00000110079.19	transcript	ENST00000337908.5	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
MS4A5_chr11_60424572_60452792	60447307	GTGCTATG others(13): Show GTGCTATGCTATGCTATGCTA	G G	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00733.hp1 HG01928.hp1 others(8): Show HG00558.hp1 HG00733.hp1 HG01928.hp1 HG02074.hp1 HG02273.hp2 HG02965.hp1 NA18972.hp1 NA18998.hp1 NA19007.hp2 NA19009.hp1 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0006 a0001c0001t0001g0181 a0001c0002t0001g0100 a0001c0001t0001g0006 a0001c0001t0001g0181 a0001c0002t0001g0100	11	462	0.0238	-20	c.493 others(35): Show c.493-298_493-279delTATGCTATGCTATGCTATGC	MS4A5	ENSG00000166930.7	transcript	ENST00000300190.7	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
MSC_chr8_71836560_71849412	71843031	AACACACA others(13): Show AACACACACACACACACACGC	A A	intron_variant intron_variant	MODIFIER	NA19054.hp2 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0067 a0001c0001t0004g0067	1	472	0.0021	-20	c.535 others(35): Show c.535-304_535-285delGCGTGTGTGTGTGTGTGTGT	MSC	ENSG00000178860.9	transcript	ENST00000325509.5	protein_coding	1/1			chr8	TogoVar
MSH2_chr2_47398156_47488223	47449015	CAAAAAAA others(13): Show CAAAAAAAAAAACAAACAAAA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02886.hp2 HG02922.hp2 others(2): Show HG02630.hp1 HG02886.hp2 HG02922.hp2 HG03471.hp1 NA21309.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0107 a0002c0003t0001g0108 a0002c0003t0001g0109 others(2): Show a0002c0003t0001g0107 a0002c0003t0001g0108 a0002c0003t0001g0109 a0002c0003t0001g0110 a0002c0003t0001g0111	5	370	0.0135	-20	c.138 others(39): Show c.1386+3370_1386+3389delCAAACAAAAAAAAAAAAAAA	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47461912	TTTTTCTT others(13): Show TTTTTCTTTTCTTTTCTTTTC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	370	0.0027	-20	c.138 others(39): Show c.1387-1080_1387-1061delTCTTTTCTTTTCTTTTCTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47461956	TCTTTTCT others(13): Show TCTTTTCTTTTCTTTCCTTTC	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02109.hp2 HG02559.hp1 others(8): Show HG01109.hp1 HG02109.hp2 HG02559.hp1 HG02615.hp1 HG02723.hp1 HG02723.hp2 HG03130.hp2 HG03453.hp1 HG06807.hp1 NA19010.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0160 a0001c0001t0001g0264 a0001c0001t0001g0280 others(8): Show a0001c0001t0001g0160 a0001c0001t0001g0264 a0001c0001t0001g0280 a0001c0001t0001g0368 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0115 a0001c0002t0001g0116 a0001c0002t0001g0117 a0001c0002t0001g0118 a0001c0002t0001g0367	11	370	0.0297	-20	c.138 others(39): Show c.1387-1070_1387-1051delTCTTTTCTTTCCTTTCCTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH2_chr2_47398156_47488223	47461961	TCTTTTCT others(13): Show TCTTTTCTTTCCTTTCCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG01255.hp2 others(6): Show HG00408.hp1 HG00597.hp1 HG01255.hp2 HG02486.hp1 NA18951.hp2 NA19001.hp1 NA19065.hp1 NA19066.hp1 NA19083.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0005 a0001c0001 a0001c0002 a0003c0005	a0001c0001t0001 a0001c0002t0001 a0003c0005t0001 a0001c0001t0001 a0001c0002t0001 a0003c0005t0001	a0001c0001t0001g0121 a0001c0001t0001g0190 a0001c0001t0001g0201 others(6): Show a0001c0001t0001g0121 a0001c0001t0001g0190 a0001c0001t0001g0201 a0001c0001t0001g0204 a0001c0001t0001g0210 a0001c0001t0001g0302 a0001c0002t0001g0122 a0003c0005t0001g0173 a0003c0005t0001g0247	9	370	0.0243	-20	c.138 others(39): Show c.1387-1065_1387-1046delTCTTTCCTTTCCTTTCCTTT	MSH2	ENSG00000095002.15	transcript	ENST00000233146.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MSH3_chr5_80649652_80881815	80681616	TTATATTT others(13): Show TTATATTTTATTAACTTAGTA	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0183 a0001c0001t0005g0183	1	362	0.0028	-20	c.134 others(39): Show c.1340+2557_1340+2576delCTTAGTATATATTTTATTAA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692178	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0013 a0013	a0013c0022 a0013c0022	a0013c0022t0004 a0013c0022t0004	a0013c0022t0004g0237 a0013c0022t0004g0237	1	362	0.0028	-20	c.134 others(41): Show c.1340+13092_1340+13111delAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692380	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	A A	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02135.hp2 NA18960.hp1 others(2): Show HG02027.hp2 HG02135.hp2 NA18960.hp1 NA18983.hp1 NA19091.hp1	a0003 a0004 a0005 a0003 a0004 a0005	a0003c0007 a0004c0005 a0005c0008 a0003c0007 a0004c0005 a0005c0008	a0003c0007t0006 a0004c0005t0007 a0005c0008t0010 a0003c0007t0006 a0004c0005t0007 a0005c0008t0010	a0003c0007t0006g0310 a0004c0005t0007g0286 a0004c0005t0007g0291 others(2): Show a0003c0007t0006g0310 a0004c0005t0007g0286 a0004c0005t0007g0291 a0004c0005t0007g0293 a0005c0008t0010g0053	5	362	0.0138	-20	c.134 others(41): Show c.1340+13294_1340+13313delAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692476	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	A A	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01993.hp2 HG03017.hp1 others(4): Show HG01981.hp2 HG01993.hp2 HG03017.hp1 HG03041.hp2 HG03453.hp2 HG03579.hp1 HG04199.hp1	a0002 a0012 a0002 a0012	a0002c0003 a0012c0013 a0002c0003 a0012c0013	a0002c0003t0003 a0002c0003t0012 a0002c0003t0031 others(1): Show a0002c0003t0003 a0002c0003t0012 a0002c0003t0031 a0012c0013t0005	a0002c0003t0003g0208 a0002c0003t0003g0214 a0002c0003t0012g0194 others(4): Show a0002c0003t0003g0208 a0002c0003t0003g0214 a0002c0003t0012g0194 a0002c0003t0031g0210 a0012c0013t0005g0033 a0012c0013t0005g0034 a0012c0013t0005g0035	7	362	0.0193	-20	c.134 others(41): Show c.1340+13390_1340+13409delAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80692500	ATAGATAA others(13): Show ATAGATAAACATGTATATGTT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0021 a0001c0002t0006g0021	1	362	0.0028	-20	c.134 others(41): Show c.1340+13414_1340+13433delAACATGTATATGTTTAGATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH3_chr5_80649652_80881815	80869795	CATATATA others(13): Show CATATATATACATATATACAT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0005 a0005c0008t0005	a0005c0008t0005g0299 a0005c0008t0005g0299	1	362	0.0028	-20	c.313 others(39): Show c.3131-3293_3131-3274delTACATATATACATATATATA	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	22/23		INFO_REALIGN_3_PRIME	chr5	TogoVar
MSH4_chr1_75791882_75918242	75869051	GTAGGAAA others(13): Show GTAGGAAAGTCTGAAACTTCC	G G	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0018 a0001c0004t0003g0018	1	332	0.0030	-20	c.130 others(39): Show c.1305+1467_1305+1486delGAAAGTCTGAAACTTCCTAG	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	9/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75896346	AACACACA others(13): Show AACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01167.hp1 HG01884.hp1 others(15): Show HG00323.hp1 HG01167.hp1 HG01884.hp1 HG02055.hp1 HG02055.hp2 HG02257.hp2 HG02258.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02818.hp2 HG03098.hp2 HG03225.hp2 HG03579.hp2 HG06807.hp2 NA18522.hp2 NA19043.hp1 NA19043.hp2	a0002 a0008 a0002 a0008	a0002c0003 a0008c0013 a0002c0003 a0008c0013	a0002c0003t0001 a0008c0013t0001 a0002c0003t0001 a0008c0013t0001	a0002c0003t0001g0087 a0002c0003t0001g0107 a0002c0003t0001g0108 others(15): Show a0002c0003t0001g0087 a0002c0003t0001g0107 a0002c0003t0001g0108 a0002c0003t0001g0116 a0002c0003t0001g0121 a0002c0003t0001g0122 a0002c0003t0001g0131 a0002c0003t0001g0133 a0002c0003t0001g0134 a0002c0003t0001g0135 a0002c0003t0001g0136 a0002c0003t0001g0137 a0002c0003t0001g0138 a0002c0003t0001g0139 a0002c0003t0001g0148 a0002c0003t0001g0156 a0002c0003t0001g0157 a0008c0013t0001g0130	18	332	0.0542	-20	c.235 others(39): Show c.2356-1532_2356-1513delACACACACACACACACACAC	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH4_chr1_75791882_75918242	75902673	GTATATAT others(13): Show GTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG03704.hp2 NA18989.hp2 others(2): Show HG00423.hp1 HG03704.hp2 NA18989.hp2 NA19078.hp2 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0003c0005t0001 a0001c0001t0001 a0003c0005t0001	a0001c0001t0001g0183 a0001c0001t0001g0186 a0001c0001t0001g0220 others(2): Show a0001c0001t0001g0183 a0001c0001t0001g0186 a0001c0001t0001g0220 a0001c0001t0001g0243 a0003c0005t0001g0160	5	332	0.0151	-20	c.261 others(39): Show c.2619+3010_2619+3029delTATATATATATATATATATA	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	19/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
MSH6_chr2_47778145_47811953	47788902	TCTTCCTT others(13): Show TCTTCCTTTTTTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01070.hp2 HG01081.hp1 others(4): Show HG00280.hp1 HG01070.hp2 HG01081.hp1 HG01255.hp1 HG01257.hp2 HG01516.hp2 HG02735.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0335 a0001c0006t0001g0336 a0001c0006t0001g0337 others(4): Show a0001c0006t0001g0335 a0001c0006t0001g0336 a0001c0006t0001g0337 a0001c0006t0001g0338 a0001c0006t0001g0339 a0001c0006t0001g0340 a0001c0006t0001g0341	7	390	0.0180	-20	c.261 others(37): Show c.261-2024_261-2005delCTTCCTTTTTTTTTTTTTTG	MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	1/9			chr2	TogoVar
MSH6_chr2_47778145_47811953	47788906	CCTTTTTT others(13): Show CCTTTTTTTTTTTTTTGTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA19084.hp2 HG02451.hp2 NA19084.hp2	a0001 a0004 a0001 a0004	a0001c0025 a0004c0012 a0001c0025 a0004c0012	a0001c0025t0001 a0004c0012t0001 a0001c0025t0001 a0004c0012t0001	a0001c0025t0001g0077 a0004c0012t0001g0204 a0001c0025t0001g0077 a0004c0012t0001g0204	2	390	0.0051	-20	c.261 others(37): Show c.261-2020_261-2001delCTTTTTTTTTTTTTTGTTTT	MSH6	ENSG00000116062.19	transcript	ENST00000234420.11	protein_coding	1/9			chr2	TogoVar
MSI2_chr17_57251523_57689689	57450255	TAAAGAAA others(13): Show TAAAGAAAGAAAGAAAGAAAG	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02055.hp2 HG02145.hp2 others(5): Show HG01106.hp1 HG02055.hp2 HG02145.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02723.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0013 a0001c0001t0022 a0001c0001t0039 a0001c0001t0063 a0001c0001t0083	a0001c0001t0002g0087 a0001c0001t0003g0147 a0001c0001t0007g0100 others(5): Show a0001c0001t0002g0087 a0001c0001t0003g0147 a0001c0001t0007g0100 a0001c0001t0013g0133 a0001c0001t0022g0073 a0001c0001t0039g0012 a0001c0001t0063g0140 a0001c0001t0083g0058	8	168	0.0476	-20	c.405 others(39): Show c.405+48832_405+48851delGAAAGAAAGAAAGAAAGAAA	MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57465437	CCTGGGTT others(13): Show CCTGGGTTTTTTCAGAAGCTG	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0101 a0001c0001t0101	a0001c0001t0101g0051 a0001c0001t0101g0051	1	168	0.0060	-20	c.405 others(39): Show c.405+63969_405+63988delGGGTTTTTTCAGAAGCTGCT	MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57477145	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA18942.hp1 NA19000.hp2 NA18942.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0044 a0001c0001t0033 a0001c0001t0044	a0001c0001t0033g0120 a0001c0001t0044g0008 a0001c0001t0033g0120 a0001c0001t0044g0008	2	168	0.0119	-20	c.406 others(39): Show c.406-52494_406-52475delGTGTGTGTGTGTGTGTGTGT	MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
MSI2_chr17_57251523_57689689	57547741	TACACACA others(13): Show TACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02145.hp2 HG02572.hp2 others(5): Show HG01106.hp1 HG02145.hp2 HG02572.hp2 HG02622.hp1 HG02809.hp2 HG03139.hp2 HG03540.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 others(5): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0021 a0001c0001t0039 a0001c0001t0074 a0001c0001t0094	a0001c0001t0003g0147 a0001c0001t0005g0031 a0001c0001t0006g0022 others(5): Show a0001c0001t0003g0147 a0001c0001t0005g0031 a0001c0001t0006g0022 a0001c0001t0012g0089 a0001c0001t0021g0078 a0001c0001t0039g0012 a0001c0001t0074g0080 a0001c0001t0094g0056	8	168	0.0476	-20	c.454 others(39): Show c.454+18046_454+18065delACACACACACACACACACAC	MSI2	ENSG00000153944.12	transcript	ENST00000284073.7	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
MSL1_chr17_40116971_40141917	40118724	CATATATA others(13): Show CATATATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp1 HG03098.hp1 HG03130.hp2 others(5): Show HG02723.hp1 HG03098.hp1 HG03130.hp2 HG03540.hp1 HG03579.hp2 NA18951.hp2 NA18997.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0002t0017 a0001c0001t0001 a0001c0002t0003 a0001c0002t0017	a0001c0001t0001g0001 a0001c0001t0001g0033 a0001c0002t0003g0018 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0033 a0001c0002t0003g0018 a0001c0002t0003g0053 a0001c0002t0003g0054 a0001c0002t0017g0055	8	356	0.0225	-20	c.-38 others(31): Show c.-3888_-3869delATATATATATATATATATAT	MSL1	ENSG00000188895.12	transcript	ENST00000398532.9	protein_coding		3246		chr17	TogoVar
MSL1_chr17_40116971_40141917	40140373	AACACACA others(13): Show AACACACACACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp2 HG03654.hp1 HG01361.hp2 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	356	0.0056	-20	c.60 others(31): Show c.6005_*6024delACACACACACACACACACAC	MSL1	ENSG00000188895.12	transcript	ENST00000398532.9	protein_coding		3457		chr17	TogoVar
MSN_chrX_65662654_65746931	65670896	TTATATAT others(13): Show TTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG02109.hp2 NA19086.hp1 HG01169.hp2 HG02109.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0002g0037 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0002g0037	3	170	0.0177	-20	c.12+ others(35): Show c.12+3083_12+3102delATATATATATATATATATAT	MSN	ENSG00000147065.18	transcript	ENST00000360270.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
MSN_chrX_65662654_65746931	65742656	TTTCCTTC others(13): Show TTTCCTTCCTTCCTTCCTTCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG02055.hp1 HG02258.hp1 others(12): Show HG00735.hp2 HG02055.hp1 HG02258.hp1 HG02615.hp1 HG02809.hp1 HG02976.hp2 HG03041.hp1 NA18970.hp1 NA18989.hp1 NA19005.hp1 NA19043.hp1 NA19066.hp1 NA19068.hp1 NA19082.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0013	a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0112 others(12): Show a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0129 a0001c0001t0002g0014 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0004g0047 a0001c0001t0004g0056 a0001c0001t0004g0125 a0001c0001t0004g0126 a0001c0001t0007g0039 a0001c0001t0013g0123	15	170	0.0882	-20	c.27 others(31): Show c.2764_*2783delTTCCTTCCTTCCTTCCTTCC	MSN	ENSG00000147065.18	transcript	ENST00000360270.7	protein_coding		726		chrX	TogoVar
MSN_chrX_65662654_65746931	65742705	TTCCTTCC others(13): Show TTCCTTCCTTCCTTCCTTCCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0041 a0001c0001t0002g0041	1	170	0.0059	-20	c.28 others(31): Show c.2813_*2832delTCCTTCCTTCCTTCCTTCCC	MSN	ENSG00000147065.18	transcript	ENST00000360270.7	protein_coding		775		chrX	TogoVar
MSN_chrX_65662654_65746931	65742752	CCCTTCCT others(13): Show CCCTTCCTTCCTTCCTTCCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0106 a0001c0001t0001g0106	1	170	0.0059	-20	c.28 others(31): Show c.2860_*2879delCCTTCCTTCCTTCCTTCCTT	MSN	ENSG00000147065.18	transcript	ENST00000360270.7	protein_coding		822		chrX	TogoVar
MSR1_chr8_16102881_16197651	16103051	ATGTATAC others(13): Show ATGTATACATGTATACATATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0205 a0001c0003t0003g0205	1	330	0.0030	-20	c.70 others(31): Show c.7014_*7033delCATATGTATACATGTATACA	MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding		4829		chr8	TogoVar
MSR1_chr8_16102881_16197651	16139764	AAAAAAAA others(13): Show AAAAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0008 a0001c0011t0008	a0001c0011t0008g0068 a0001c0011t0008g0068	1	330	0.0030	-20	c.103 others(39): Show c.1033+3774_1033+3793delATATATATATTTTTTTTTTT	MSR1	ENSG00000038945.15	transcript	ENST00000262101.10	protein_coding	8/9			chr8	TogoVar
MSRA_chr8_10049292_10433891	10218114	CTATTTAT others(13): Show CTATTTATTTATTTATTTATT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02647.hp2 NA18906.hp1 HG02055.hp1 HG02647.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0030 a0001c0001t0004g0029 a0001c0001t0004g0042 a0001c0001t0001g0030 a0001c0001t0004g0029 a0001c0001t0004g0042	3	286	0.0105	-20	c.211 others(39): Show c.211+10243_211+10262delATTTATTTATTTATTTATTT	MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
MSRA_chr8_10049292_10433891	10316527	CCTCTCTC others(13): Show CCTCTCTCTCTCTCTCTCTCT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0091 a0001c0001t0003g0091	1	286	0.0035	-20	c.437 others(37): Show c.437-3328_437-3309delTCTCTCTCTCTCTCTCTCTC	MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
MSRA_chr8_10049292_10433891	10343034	CACACACA others(13): Show CACACACACACACACACACAG	C C	intron_variant intron_variant	MODIFIER	HG02129.hp2 NA18747.hp2 NA18945.hp2 others(5): Show HG02129.hp2 NA18747.hp2 NA18945.hp2 NA18960.hp2 NA18967.hp2 NA19060.hp1 NA19077.hp1 NA19085.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 a0003c0004t0001	a0001c0001t0001g0027 a0001c0001t0001g0149 a0001c0001t0001g0280 others(5): Show a0001c0001t0001g0027 a0001c0001t0001g0149 a0001c0001t0001g0280 a0001c0001t0003g0119 a0001c0001t0003g0254 a0001c0002t0002g0175 a0001c0002t0002g0275 a0003c0004t0001g0153	8	286	0.0280	-20	c.543 others(39): Show c.543+23065_543+23084delGACACACACACACACACACA	MSRA	ENSG00000175806.15	transcript	ENST00000317173.9	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr8	TogoVar

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