Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATF7IP2_chr16_10381061_10488638	10410311	AGTTTTGT others(13): Show AGTTTTGTTTTGTTTTGTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(186): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp2 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp2 HG01069.hp2 HG01074.hp1 HG01074.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01175.hp2 HG01243.hp2 HG01255.hp1 HG01257.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01496.hp1 HG01516.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01981.hp1 HG02004.hp1 HG02040.hp2 HG02055.hp2 HG02071.hp1 HG02080.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03688.hp2 HG03704.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18939.hp1 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18947.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18961.hp2 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18978.hp1 NA18979.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18986.hp2 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19001.hp1 NA19002.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp2 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19070.hp1 NA19072.hp1 NA19076.hp2 NA19077.hp2 NA19080.hp2 NA19082.hp2 NA19084.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20752.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0006 a0008 a0009 a0011	a0001c0002 a0001c0003 a0001c0005 others(9): Show a0001c0002 a0001c0003 a0001c0005 a0002c0001 a0002c0010 a0002c0019 a0003c0004 a0005c0009 a0006c0022 a0008c0020 a0009c0021 a0011c0014	a0001c0002t0003 a0001c0002t0005 a0001c0002t0013 others(18): Show a0001c0002t0003 a0001c0002t0005 a0001c0002t0013 a0001c0003t0002 a0001c0003t0008 a0001c0005t0016 a0002c0001t0001 a0002c0001t0002 a0002c0001t0009 a0002c0001t0012 a0002c0001t0014 a0002c0001t0024 a0002c0010t0002 a0002c0019t0001 a0003c0004t0002 a0003c0004t0023 a0005c0009t0002 a0006c0022t0002 a0008c0020t0002 a0009c0021t0002 a0011c0014t0003	a0001c0002t0003g0293 a0001c0002t0003g0294 a0001c0002t0003g0298 others(184): Show a0001c0002t0003g0293 a0001c0002t0003g0294 a0001c0002t0003g0298 a0001c0002t0003g0339 a0001c0002t0003g0340 a0001c0002t0003g0343 a0001c0002t0003g0358 a0001c0002t0003g0359 a0001c0002t0003g0360 a0001c0002t0003g0361 a0001c0002t0003g0362 a0001c0002t0003g0363 a0001c0002t0005g0195 a0001c0002t0013g0357 a0001c0003t0002g0038 a0001c0003t0008g0026 a0001c0003t0008g0027 a0001c0005t0016g0030 a0002c0001t0001g0001 a0002c0001t0001g0002 a0002c0001t0001g0007 a0002c0001t0001g0008 a0002c0001t0001g0009 a0002c0001t0001g0010 a0002c0001t0001g0011 a0002c0001t0001g0012 a0002c0001t0001g0013 a0002c0001t0001g0014 a0002c0001t0001g0016 a0002c0001t0001g0017 a0002c0001t0001g0018 a0002c0001t0001g0019 a0002c0001t0001g0020 a0002c0001t0001g0021 a0002c0001t0001g0022 a0002c0001t0001g0023 a0002c0001t0001g0024 a0002c0001t0001g0039 a0002c0001t0001g0040 a0002c0001t0001g0042 a0002c0001t0001g0043 a0002c0001t0001g0046 a0002c0001t0001g0047 a0002c0001t0001g0048 a0002c0001t0001g0049 a0002c0001t0001g0050 a0002c0001t0001g0051 a0002c0001t0001g0052 a0002c0001t0001g0053 a0002c0001t0001g0054 a0002c0001t0001g0055 a0002c0001t0001g0056 a0002c0001t0001g0057 a0002c0001t0001g0059 a0002c0001t0001g0061 a0002c0001t0001g0062 a0002c0001t0001g0063 a0002c0001t0001g0064 a0002c0001t0001g0065 a0002c0001t0001g0066 a0002c0001t0001g0075 a0002c0001t0001g0086 a0002c0001t0001g0089 a0002c0001t0001g0092 a0002c0001t0001g0098 a0002c0001t0001g0099 a0002c0001t0001g0100 a0002c0001t0001g0101 a0002c0001t0001g0102 a0002c0001t0001g0104 a0002c0001t0001g0105 a0002c0001t0001g0106 a0002c0001t0001g0108 a0002c0001t0001g0109 a0002c0001t0001g0110 a0002c0001t0001g0117 a0002c0001t0001g0118 a0002c0001t0001g0119 a0002c0001t0001g0120 a0002c0001t0001g0122 a0002c0001t0001g0124 a0002c0001t0001g0125 a0002c0001t0001g0128 a0002c0001t0001g0129 a0002c0001t0001g0130 a0002c0001t0001g0133 a0002c0001t0001g0135 a0002c0001t0001g0136 a0002c0001t0001g0138 a0002c0001t0001g0139 a0002c0001t0001g0143 a0002c0001t0001g0144 a0002c0001t0001g0147 a0002c0001t0001g0151 a0002c0001t0001g0152 a0002c0001t0001g0167 a0002c0001t0001g0168 a0002c0001t0001g0170 a0002c0001t0001g0173 a0002c0001t0001g0175 a0002c0001t0001g0178 a0002c0001t0001g0179 a0002c0001t0001g0180 a0002c0001t0001g0181 a0002c0001t0001g0182 a0002c0001t0001g0183 a0002c0001t0001g0184 a0002c0001t0001g0185 a0002c0001t0001g0186 a0002c0001t0001g0188 a0002c0001t0001g0191 a0002c0001t0001g0192 a0002c0001t0001g0193 a0002c0001t0001g0366 a0002c0001t0002g0015 a0002c0001t0002g0036 a0002c0001t0002g0044 a0002c0001t0002g0045 a0002c0001t0002g0058 a0002c0001t0002g0088 a0002c0001t0002g0093 a0002c0001t0002g0094 a0002c0001t0002g0095 a0002c0001t0002g0096 a0002c0001t0002g0103 a0002c0001t0002g0111 a0002c0001t0002g0112 a0002c0001t0002g0114 a0002c0001t0002g0115 a0002c0001t0002g0116 a0002c0001t0002g0131 a0002c0001t0002g0132 a0002c0001t0002g0140 a0002c0001t0002g0141 a0002c0001t0002g0142 a0002c0001t0002g0148 a0002c0001t0002g0150 a0002c0001t0002g0153 a0002c0001t0002g0155 a0002c0001t0002g0164 a0002c0001t0002g0165 a0002c0001t0002g0166 a0002c0001t0002g0190 a0002c0001t0009g0169 a0002c0001t0009g0171 a0002c0001t0009g0172 a0002c0001t0009g0174 a0002c0001t0009g0176 a0002c0001t0012g0090 a0002c0001t0012g0097 a0002c0001t0012g0123 a0002c0001t0014g0073 a0002c0001t0014g0074 a0002c0001t0024g0177 a0002c0010t0002g0145 a0002c0010t0002g0154 a0002c0019t0001g0187 a0003c0004t0002g0025 a0003c0004t0002g0070 a0003c0004t0002g0071 a0003c0004t0002g0072 a0003c0004t0002g0076 a0003c0004t0002g0077 a0003c0004t0002g0078 a0003c0004t0002g0079 a0003c0004t0002g0080 a0003c0004t0002g0081 a0003c0004t0002g0082 a0003c0004t0002g0084 a0003c0004t0002g0085 a0003c0004t0002g0087 a0003c0004t0002g0113 a0003c0004t0002g0121 a0003c0004t0002g0126 a0003c0004t0002g0134 a0003c0004t0002g0137 a0003c0004t0002g0149 a0003c0004t0002g0196 a0003c0004t0002g0197 a0003c0004t0023g0127 a0005c0009t0002g0067 a0005c0009t0002g0068 a0005c0009t0002g0069 a0006c0022t0002g0083 a0008c0020t0002g0006 a0009c0021t0002g0189 a0011c0014t0003g0268	189	376	0.5027	-20	c.-24 others(39): Show c.-241-4232_-241-4213delGTTTTGTTTTGTTTTGTTTT	ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7IP_chr12_14360682_14507930	14439840	AATCCATC others(13): Show AATCCATCCATCCATCCATCC	A A	intron_variant intron_variant	MODIFIER	NA19057.hp2 NA19057.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0008 a0002c0006t0008	a0002c0006t0008g0219 a0002c0006t0008g0219	1	346	0.0029	-20	c.192 others(39): Show c.1929+1602_1929+1621delATCCATCCATCCATCCATCC	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494284	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02717.hp2 NA19030.hp2 HG02109.hp1 HG02717.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0014 a0001c0001t0016 a0001c0001t0006 a0001c0001t0014 a0001c0001t0016	a0001c0001t0006g0136 a0001c0001t0014g0125 a0001c0001t0016g0126 a0001c0001t0006g0136 a0001c0001t0014g0125 a0001c0001t0016g0126	3	346	0.0087	-20	c.328 others(39): Show c.3281-1916_3281-1897delATATATATATATATATATAT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7_chr12_53507054_53631382	53529664	CATATATA others(13): Show CATATATATATACACACATAT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp2 HG03540.hp2 others(1): Show HG02559.hp2 HG03130.hp2 HG03540.hp2 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0225 a0001c0003t0008g0227 a0001c0003t0008g0228 others(1): Show a0001c0003t0008g0225 a0001c0003t0008g0227 a0001c0003t0008g0228 a0001c0003t0008g0230	4	330	0.0121	-20	c.927 others(37): Show c.927+2060_927+2079delATATGTGTGTATATATATAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	9/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53570729	CTGTGTGC others(13): Show CTGTGTGCGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01943.hp2 HG01993.hp2 others(1): Show HG01261.hp1 HG01943.hp2 HG01993.hp2 HG02148.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0113 a0001c0001t0007g0114 a0001c0001t0007g0136 others(1): Show a0001c0001t0007g0113 a0001c0001t0007g0114 a0001c0001t0007g0136 a0001c0001t0007g0138	4	330	0.0121	-20	c.49- others(37): Show c.49-18112_49-18093delCACACACACACACGCACACA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATG10_chr5_81967023_82261133	82197716	TTCTTTCT others(13): Show TTCTTTCTATCTATCTATCTA	T T	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0001 a0006c0006t0001	a0006c0006t0001g0123 a0006c0006t0001g0123	1	226	0.0044	-20	c.453 others(39): Show c.453+19133_453+19152delTTCTATCTATCTATCTATCT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82197720	TTCTATCT others(13): Show TTCTATCTATCTATCTATCTA	T T	intron_variant intron_variant	MODIFIER	HG03225.hp1 NA20300.hp1 HG03225.hp1 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0022 a0003c0003t0001 a0001c0001t0022 a0003c0003t0001	a0001c0001t0022g0156 a0003c0003t0001g0049 a0001c0001t0022g0156 a0003c0003t0001g0049	2	226	0.0089	-20	c.453 others(39): Show c.453+19169_453+19188delATCTATCTATCTATCTATCT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG13_chr11_46612553_46679518	46622073	TTACATAT others(13): Show TTACATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02965.hp2 HG01109.hp1 HG02965.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0020 a0001c0002t0021 a0001c0002t0020 a0001c0002t0021	a0001c0002t0020g0025 a0001c0002t0021g0026 a0001c0002t0020g0025 a0001c0002t0021g0026	2	218	0.0092	-20	c.-70 others(37): Show c.-70+4186_-70+4205delCATATATATATATATATATA	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG13_chr11_46612553_46679518	46622076	CATATATA others(13): Show CATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG03130.hp2 HG03486.hp1 others(2): Show HG01261.hp2 HG03130.hp2 HG03486.hp1 HG03486.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0152 others(2): Show a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0003g0175	5	218	0.0229	-20	c.-70 others(37): Show c.-70+4219_-70+4238delATATATATATATATATATAT	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG14_chr14_55361391_55416830	55402920	AAAAAAAA others(13): Show AAAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01928.hp1 HG03710.hp1 HG01928.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0002 a0001c0001t0005 a0001c0002t0002	a0001c0001t0005g0200 a0001c0002t0002g0036 a0001c0001t0005g0200 a0001c0002t0002g0036	2	366	0.0055	-20	c.222 others(37): Show c.222-5506_222-5487delATATATATATATATTTTTTT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402924	AAAATATA others(13): Show AAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0029 a0001c0002t0029	a0001c0002t0029g0035 a0001c0002t0029g0035	1	366	0.0027	-20	c.222 others(37): Show c.222-5510_222-5491delATATATATATATATATATTT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402926	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 NA18993.hp1 NA19057.hp1 HG01261.hp1 NA18993.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0014 a0001c0002t0002g0104 a0001c0001t0001g0014 a0001c0002t0002g0104	3	366	0.0082	-20	c.222 others(37): Show c.222-5512_222-5493delATATATATATATATATATAT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG2B_chr14_96274195_96368341	96308237	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02886.hp1 HG02886.hp2 others(6): Show HG02258.hp1 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG03225.hp2 HG03486.hp2 HG04184.hp1 NA18982.hp1	a0001 a0009 a0014 others(1): Show a0001 a0009 a0014 a0024	a0001c0002 a0009c0018 a0014c0019 others(1): Show a0001c0002 a0009c0018 a0014c0019 a0024c0028	a0001c0002t0001 a0009c0018t0005 a0014c0019t0001 others(1): Show a0001c0002t0001 a0009c0018t0005 a0014c0019t0001 a0024c0028t0058	a0001c0002t0001g0011 a0001c0002t0001g0272 a0001c0002t0001g0282 others(5): Show a0001c0002t0001g0011 a0001c0002t0001g0272 a0001c0002t0001g0282 a0001c0002t0001g0302 a0001c0002t0001g0305 a0009c0018t0005g0083 a0014c0019t0001g0273 a0024c0028t0058g0326	9	356	0.0253	-20	c.430 others(39): Show c.4303+1196_4303+1215delGTGTGTATATATATATATAT	ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	29/41			chr14	TogoVar
ATG2B_chr14_96274195_96368341	96314670	CTGTTTTG others(13): Show CTGTTTTGTTTTGTTTTGTTT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01106.hp2 others(1): Show HG01070.hp1 HG01071.hp2 HG01106.hp2 HG03942.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0006 a0002c0001t0002g0126 a0002c0001t0002g0146 a0002c0001t0002g0006 a0002c0001t0002g0126 a0002c0001t0002g0146	4	356	0.0112	-20	c.364 others(37): Show c.3642+464_3642+483delAAACAAAACAAAACAAAACA	ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	23/41			chr14	TogoVar
ATG3_chr3_112527510_112566962	112536920	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01975.hp1 NA18612.hp1 NA18948.hp1 others(2): Show HG01975.hp1 NA18612.hp1 NA18948.hp1 NA19058.hp2 NA19081.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0002c0004t0001 a0001c0001t0001 a0002c0004t0001	a0001c0001t0001g0099 a0001c0001t0001g0119 a0001c0001t0001g0120 others(2): Show a0001c0001t0001g0099 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0130 a0002c0004t0001g0182	5	376	0.0133	-20	c.667 others(35): Show c.667-338_667-319delTTTTTTTTTTTTTTTTTTTT	ATG3	ENSG00000144848.11	transcript	ENST00000283290.10	protein_coding	9/11			chr3	TogoVar
ATG4A_chrX_108086778_108159671	108141071	CATATATA others(13): Show CATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	249	0.0040	-20	c.814 others(37): Show c.814+2899_814+2918delATATATATATATATATATAT	ATG4A	ENSG00000101844.18	transcript	ENST00000372232.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
ATG4A_chrX_108086778_108159671	108148020	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01884.hp2 HG02080.hp2 others(2): Show HG01361.hp1 HG01884.hp2 HG02080.hp2 HG02258.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0168 others(2): Show a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0168 a0001c0001t0002g0178 a0001c0002t0001g0142	5	249	0.0201	-20	c.815 others(37): Show c.815-2095_815-2076delATATATATATATATATATAT	ATG4A	ENSG00000101844.18	transcript	ENST00000372232.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
ATG4B_chr2_241632693_241678857	241657009	CCTGGGCT others(13): Show CCTGGGCTGGAGTGCAGTGGT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00438.hp1 others(41): Show HG00280.hp2 HG00323.hp2 HG00438.hp1 HG00597.hp1 HG00621.hp2 HG00673.hp1 HG01952.hp2 HG01981.hp1 HG02027.hp1 HG02074.hp2 HG02080.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02155.hp2 HG02293.hp2 HG03704.hp1 NA18941.hp2 NA18942.hp1 NA18946.hp1 NA18949.hp1 NA18951.hp1 NA18953.hp2 NA18957.hp2 NA18962.hp1 NA18965.hp1 NA18969.hp1 NA18971.hp1 NA18975.hp1 NA18982.hp1 NA18984.hp2 NA18991.hp2 NA18999.hp2 NA19000.hp2 NA19006.hp2 NA19054.hp1 NA19056.hp2 NA19060.hp2 NA19064.hp1 NA19066.hp1 NA19068.hp1 NA19068.hp2 NA19083.hp2 NA19087.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0005 a0001c0007 others(2): Show a0001c0002 a0001c0005 a0001c0007 a0002c0003 a0004c0012	a0001c0002t0003 a0001c0002t0005 a0001c0002t0013 others(6): Show a0001c0002t0003 a0001c0002t0005 a0001c0002t0013 a0001c0002t0022 a0001c0002t0035 a0001c0005t0005 a0001c0007t0005 a0002c0003t0004 a0004c0012t0013	a0001c0002t0003g0074 a0001c0002t0003g0173 a0001c0002t0005g0014 others(39): Show a0001c0002t0003g0074 a0001c0002t0003g0173 a0001c0002t0005g0014 a0001c0002t0005g0016 a0001c0002t0005g0017 a0001c0002t0005g0060 a0001c0002t0005g0061 a0001c0002t0005g0062 a0001c0002t0005g0063 a0001c0002t0005g0064 a0001c0002t0005g0066 a0001c0002t0005g0071 a0001c0002t0005g0072 a0001c0002t0005g0073 a0001c0002t0005g0075 a0001c0002t0005g0076 a0001c0002t0005g0077 a0001c0002t0005g0078 a0001c0002t0005g0080 a0001c0002t0005g0084 a0001c0002t0005g0085 a0001c0002t0005g0088 a0001c0002t0005g0166 a0001c0002t0005g0167 a0001c0002t0005g0168 a0001c0002t0005g0169 a0001c0002t0005g0170 a0001c0002t0013g0068 a0001c0002t0013g0079 a0001c0002t0013g0089 a0001c0002t0022g0086 a0001c0002t0022g0087 a0001c0002t0035g0016 a0001c0005t0005g0174 a0001c0007t0005g0058 a0001c0007t0005g0059 a0001c0007t0005g0065 a0001c0007t0005g0067 a0002c0003t0004g0081 a0002c0003t0004g0082 a0002c0003t0004g0083 a0004c0012t0013g0070	44	410	0.1073	-20	c.458 others(37): Show c.458+1667_458+1686delCTGGGCTGGAGTGCAGTGGT	ATG4B	ENSG00000168397.17	transcript	ENST00000404914.8	protein_coding	6/12			chr2	TogoVar
ATG4C_chr1_62779132_62870516	62801958	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0149 a0001c0001t0002g0149	1	322	0.0031	-20	c.-68 others(37): Show c.-68-1753_-68-1734delAAAAAAAAAAAAAAAAAAAA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62861608	CACACACA others(13): Show CACACACACACACACACACAG	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00558.hp2 HG00597.hp1 others(80): Show HG00099.hp1 HG00558.hp2 HG00597.hp1 HG00735.hp2 HG01106.hp2 HG01167.hp1 HG01168.hp1 HG01192.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01928.hp1 HG01943.hp1 HG01975.hp1 HG01981.hp2 HG02004.hp1 HG02027.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02080.hp2 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp2 HG02258.hp1 HG02523.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02717.hp2 HG02818.hp2 HG02896.hp2 HG02897.hp1 HG03041.hp1 HG03139.hp2 HG03654.hp2 HG03831.hp1 HG03834.hp2 NA18522.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp2 NA18945.hp2 NA18948.hp1 NA18954.hp2 NA18961.hp2 NA18965.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18975.hp1 NA18978.hp1 NA18979.hp2 NA18981.hp1 NA18982.hp2 NA18995.hp1 NA18999.hp1 NA19002.hp1 NA19005.hp1 NA19009.hp2 NA19011.hp2 NA19012.hp1 NA19054.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19074.hp2 NA19076.hp1 NA19078.hp1 NA19082.hp2 NA19088.hp2 NA19089.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0002t0002 a0001c0004t0002	a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0010 others(73): Show a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0010 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0136 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0176 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0003g0185 a0001c0001t0004g0006 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0007g0145 a0001c0002t0002g0007 a0001c0002t0002g0009 a0001c0002t0002g0146 a0001c0002t0002g0162 a0001c0002t0002g0165 a0001c0002t0002g0174 a0001c0002t0002g0204 a0001c0002t0002g0243 a0001c0004t0002g0177	83	322	0.2578	-20	c.121 others(39): Show c.1210-2382_1210-2363delCACACACACACACACACAGA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4D_chr19_10538904_10558418	10548003	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02280.hp1 HG02280.hp2 others(6): Show HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02486.hp2 HG02895.hp2 HG02976.hp1 HG03041.hp2 HG03130.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0024 a0001c0001t0001g0152 a0001c0001t0004g0028 others(2): Show a0001c0001t0001g0024 a0001c0001t0001g0152 a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0059	9	406	0.0222	-20	c.835 others(35): Show c.835+776_835+795delTTTTTTTTTTTTTTTTTTTT	ATG4D	ENSG00000130734.10	transcript	ENST00000309469.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
ATG4D_chr19_10538904_10558418	10553853	GAGAGGAT others(13): Show GAGAGGATCTCTGCAGCAGAT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	406	0.0025	-20	c.78 others(29): Show c.787_*806delAGAGGATCTCTGCAGCAGAT	ATG4D	ENSG00000130734.10	transcript	ENST00000309469.9	protein_coding		436		chr19	TogoVar
ATG5_chr6_106179476_106330760	106266482	TCCCTAAC others(13): Show TCCCTAACTCATTTTATGAGG	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02622.hp1 HG03486.hp1 HG02451.hp1 HG02622.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0109 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0109	3	358	0.0084	-20	c.478 others(39): Show c.478+13159_478+13178delCCTCATAAAATGAGTTAGGG	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	5/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106297717	AACACACA others(13): Show AACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG03471.hp1 HG02895.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0292 a0001c0001t0001g0296 a0001c0001t0001g0292 a0001c0001t0001g0296	2	358	0.0056	-20	c.237 others(37): Show c.237-4631_237-4612delGTGTGTGTGTGTGTGTGTGT	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	3/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106297747	CACACACA others(13): Show CACACACACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01517.hp1 HG01891.hp1 others(3): Show HG01516.hp2 HG01517.hp1 HG01891.hp1 HG02055.hp2 HG02922.hp2 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0002 a0001c0004t0002 a0001c0003t0002 a0001c0004t0002	a0001c0003t0002g0011 a0001c0003t0002g0012 a0001c0003t0002g0013 others(3): Show a0001c0003t0002g0011 a0001c0003t0002g0012 a0001c0003t0002g0013 a0001c0003t0002g0014 a0001c0004t0002g0015 a0001c0004t0002g0016	6	358	0.0168	-20	c.237 others(37): Show c.237-4661_237-4642delATGTGTGTGTGTGTGTGTGT	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	3/7			chr6	TogoVar
ATG7_chr3_11267397_11562665	11372831	TGTGTGCG others(13): Show TGTGTGCGTGCGTGCGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02572.hp2 HG02647.hp2 others(6): Show HG02145.hp2 HG02572.hp2 HG02647.hp2 HG02886.hp1 HG03139.hp2 HG03486.hp1 HG03579.hp1 NA18906.hp2 NA19043.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0007c0010 a0001c0001 a0001c0002 a0007c0010	a0001c0001t0002 a0001c0001t0006 a0001c0001t0019 others(4): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0019 a0001c0001t0049 a0001c0002t0014 a0001c0002t0040 a0007c0010t0001	a0001c0001t0002g0189 a0001c0001t0002g0241 a0001c0001t0006g0182 others(6): Show a0001c0001t0002g0189 a0001c0001t0002g0241 a0001c0001t0006g0182 a0001c0001t0019g0130 a0001c0001t0019g0194 a0001c0001t0049g0001 a0001c0002t0014g0181 a0001c0002t0040g0141 a0007c0010t0001g0244	9	292	0.0308	-20	c.187 others(39): Show c.1876-7135_1876-7116delCGTGCGTGCGTGTGCGTGTG	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11426043	TTTTGGGC others(13): Show TTTTGGGCTATCATGAATAGC	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00673.hp2 HG00735.hp2 others(6): Show HG00642.hp1 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG01123.hp2 HG01358.hp2 HG02083.hp1 HG04184.hp1 NA18942.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0030 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0030 a0001c0002t0001	a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0107 others(6): Show a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0107 a0001c0001t0001g0116 a0001c0001t0001g0284 a0001c0001t0002g0196 a0001c0001t0002g0201 a0001c0001t0030g0136 a0001c0002t0001g0045	9	292	0.0308	-20	c.195 others(37): Show c.1957-760_1957-741delTTTGGGCTATCATGAATAGC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	19/20			chr3	TogoVar
ATG7_chr3_11267397_11562665	11462841	TTTTATTT others(13): Show TTTTATTTATTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01099.hp2 HG01167.hp1 others(19): Show HG00741.hp1 HG01099.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp1 HG01361.hp2 HG01943.hp1 HG01993.hp1 HG02055.hp2 HG02559.hp1 HG02622.hp1 HG02818.hp1 HG02895.hp1 HG02897.hp2 HG03098.hp1 HG03130.hp2 HG03471.hp2 HG03516.hp2 HG03704.hp1 NA19058.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0044 a0001c0002t0013 a0001c0002t0024 a0002c0003t0008 a0002c0003t0016 a0002c0003t0022 a0002c0003t0023 a0002c0003t0032 a0002c0004t0021 a0002c0004t0025	a0001c0001t0001g0022 a0001c0001t0001g0087 a0001c0001t0001g0127 others(19): Show a0001c0001t0001g0022 a0001c0001t0001g0087 a0001c0001t0001g0127 a0001c0001t0003g0042 a0001c0001t0003g0253 a0001c0001t0006g0152 a0001c0001t0044g0262 a0001c0002t0013g0151 a0001c0002t0024g0263 a0002c0003t0008g0275 a0002c0003t0008g0276 a0002c0003t0008g0277 a0002c0003t0008g0278 a0002c0003t0008g0279 a0002c0003t0008g0280 a0002c0003t0016g0286 a0002c0003t0016g0287 a0002c0003t0022g0289 a0002c0003t0023g0285 a0002c0003t0032g0124 a0002c0004t0021g0288 a0002c0004t0025g0292	22	292	0.0753	-20	c.207 others(41): Show c.2079+35955_2079+35974delATTTATTTATTTATTTATTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11519539	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01168.hp2 HG01175.hp2 others(1): Show HG01071.hp1 HG01168.hp2 HG01175.hp2 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0015 a0001c0001t0006 a0001c0002t0015	a0001c0001t0006g0145 a0001c0001t0006g0146 a0001c0001t0006g0147 others(1): Show a0001c0001t0006g0145 a0001c0001t0006g0146 a0001c0001t0006g0147 a0001c0002t0015g0291	4	292	0.0137	-20	c.208 others(41): Show c.2080-35253_2080-35234delTTTTTTTTTTTTTTTTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11521177	AGCCCTAG others(13): Show AGCCCTAGGCAGCCATTGGTT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0194 a0001c0001t0019g0194	1	292	0.0034	-20	c.208 others(41): Show c.2080-33630_2080-33611delCTAGGCAGCCATTGGTTGCC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11538996	TGCTATTT others(13): Show TGCTATTTTCAATGTGAAAAG	T T	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03579.hp1 NA18906.hp2 HG03098.hp1 HG03579.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0014 a0001c0001t0006 a0001c0002t0014	a0001c0001t0006g0152 a0001c0001t0006g0182 a0001c0002t0014g0181 a0001c0001t0006g0152 a0001c0001t0006g0182 a0001c0002t0014g0181	3	292	0.0103	-20	c.208 others(41): Show c.2080-15814_2080-15795delGCTATTTTCAATGTGAAAAG	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20			chr3	TogoVar
ATIC_chr2_215307059_215354764	215310304	CAGTGTGG others(13): Show CAGTGTGGGTGACAGAGCGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(378): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18961.hp1 NA18961.hp2 NA18965.hp1 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012	a0001c0001 a0001c0005 a0001c0007 others(15): Show a0001c0001 a0001c0005 a0001c0007 a0001c0010 a0001c0011 a0002c0002 a0002c0014 a0002c0016 a0003c0003 a0004c0004 a0005c0006 a0006c0015 a0007c0013 a0008c0012 a0009c0008 a0010c0009 a0011c0017 a0012c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0005t0005 a0001c0007t0001 a0001c0010t0008 a0001c0011t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0014t0001 a0002c0016t0003 a0003c0003t0001 a0004c0004t0001 a0005c0006t0005 a0006c0015t0003 a0007c0013t0001 a0008c0012t0001 a0009c0008t0001 a0010c0009t0001 a0011c0017t0006 a0012c0018t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(236): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0203 a0001c0001t0001g0213 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0013 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0003g0097 a0001c0001t0003g0198 a0001c0001t0004g0004 a0001c0001t0004g0020 a0001c0001t0004g0050 a0001c0001t0004g0051 a0001c0001t0004g0052 a0001c0001t0004g0053 a0001c0001t0004g0054 a0001c0001t0004g0055 a0001c0001t0004g0056 a0001c0001t0004g0057 a0001c0001t0005g0024 a0001c0001t0005g0098 a0001c0001t0005g0224 a0001c0001t0006g0026 a0001c0001t0006g0027 a0001c0001t0006g0111 a0001c0001t0007g0058 a0001c0001t0007g0061 a0001c0001t0007g0068 a0001c0001t0007g0069 a0001c0001t0007g0074 a0001c0001t0008g0016 a0001c0001t0009g0009 a0001c0005t0005g0014 a0001c0007t0001g0040 a0001c0010t0008g0046 a0001c0011t0002g0001 a0002c0002t0001g0011 a0002c0002t0001g0038 a0002c0002t0001g0163 a0002c0002t0001g0173 a0002c0002t0001g0191 a0002c0002t0001g0192 a0002c0002t0001g0193 a0002c0002t0001g0194 a0002c0002t0001g0223 a0002c0002t0001g0226 a0002c0002t0002g0023 a0002c0002t0002g0088 a0002c0002t0002g0089 a0002c0002t0002g0090 a0002c0002t0002g0091 a0002c0002t0002g0092 a0002c0002t0003g0003 a0002c0002t0003g0010 a0002c0002t0003g0011 a0002c0002t0003g0041 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0047 a0002c0002t0003g0095 a0002c0002t0003g0170 a0002c0002t0003g0171 a0002c0002t0003g0172 a0002c0002t0003g0174 a0002c0002t0003g0175 a0002c0002t0003g0177 a0002c0002t0003g0178 a0002c0002t0003g0180 a0002c0002t0003g0181 a0002c0002t0003g0182 a0002c0002t0003g0183 a0002c0002t0003g0184 a0002c0002t0003g0185 a0002c0002t0003g0186 a0002c0002t0003g0187 a0002c0002t0003g0188 a0002c0002t0003g0189 a0002c0002t0003g0190 a0002c0002t0003g0195 a0002c0002t0003g0196 a0002c0002t0003g0197 a0002c0002t0003g0199 a0002c0002t0003g0200 a0002c0002t0003g0201 a0002c0002t0003g0202 a0002c0002t0003g0232 a0002c0014t0001g0179 a0002c0016t0003g0011 a0003c0003t0001g0205 a0003c0003t0001g0206 a0003c0003t0001g0211 a0003c0003t0001g0212 a0003c0003t0001g0214 a0003c0003t0001g0215 a0003c0003t0001g0217 a0004c0004t0001g0204 a0004c0004t0001g0207 a0004c0004t0001g0208 a0004c0004t0001g0209 a0004c0004t0001g0210 a0005c0006t0005g0099 a0005c0006t0005g0100 a0006c0015t0003g0176 a0007c0013t0001g0002 a0008c0012t0001g0049 a0009c0008t0001g0216 a0010c0009t0001g0233 a0011c0017t0006g0112 a0012c0018t0001g0048	381	382	0.9974	-20	c.-18 others(31): Show c.-1838_-1819delAGTGTGGGTGACAGAGCGAG	ATIC	ENSG00000138363.15	transcript	ENST00000236959.14	protein_coding		1754		chr2	TogoVar
ATL1_chr14_50555145_50638045	50616455	GTTATTTA others(13): Show GTTATTTATTTATTTATTTAT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp2 HG00423.hp2 others(72): Show HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00639.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01109.hp1 HG01167.hp1 HG01192.hp2 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01496.hp2 HG01884.hp1 HG01943.hp2 HG02015.hp1 HG02071.hp2 HG02109.hp2 HG02145.hp1 HG02257.hp2 HG02280.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02970.hp1 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03688.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18951.hp1 NA18960.hp1 NA18981.hp1 NA19043.hp2 NA19060.hp1 NA19065.hp1 NA19077.hp2 NA19080.hp2 NA19081.hp2 NA19083.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0007 others(1): Show a0001c0001 a0001c0003 a0001c0007 a0002c0013	a0001c0001t0001 a0001c0003t0001 a0001c0003t0005 others(3): Show a0001c0001t0001 a0001c0003t0001 a0001c0003t0005 a0001c0003t0007 a0001c0007t0001 a0002c0013t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(64): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0003t0001g0003 a0001c0003t0001g0004 a0001c0003t0001g0005 a0001c0003t0001g0013 a0001c0003t0001g0032 a0001c0003t0001g0033 a0001c0003t0001g0034 a0001c0003t0001g0035 a0001c0003t0001g0036 a0001c0003t0001g0037 a0001c0003t0001g0038 a0001c0003t0001g0039 a0001c0003t0001g0040 a0001c0003t0001g0041 a0001c0003t0001g0042 a0001c0003t0001g0043 a0001c0003t0001g0044 a0001c0003t0001g0046 a0001c0003t0001g0047 a0001c0003t0001g0048 a0001c0003t0001g0049 a0001c0003t0001g0050 a0001c0003t0001g0051 a0001c0003t0001g0061 a0001c0003t0001g0062 a0001c0003t0001g0063 a0001c0003t0001g0097 a0001c0003t0001g0098 a0001c0003t0001g0099 a0001c0003t0001g0106 a0001c0003t0001g0137 a0001c0003t0001g0147 a0001c0003t0001g0148 a0001c0003t0001g0149 a0001c0003t0001g0150 a0001c0003t0001g0151 a0001c0003t0001g0152 a0001c0003t0001g0153 a0001c0003t0001g0157 a0001c0003t0001g0158 a0001c0003t0001g0159 a0001c0003t0001g0160 a0001c0003t0001g0163 a0001c0003t0001g0166 a0001c0003t0001g0197 a0001c0003t0001g0199 a0001c0003t0001g0202 a0001c0003t0001g0208 a0001c0003t0001g0221 a0001c0003t0001g0222 a0001c0003t0001g0297 a0001c0003t0001g0298 a0001c0003t0005g0229 a0001c0003t0007g0089 a0001c0007t0001g0068 a0001c0007t0001g0234 a0002c0013t0001g0045	75	320	0.2344	-20	c.862 others(37): Show c.862+1975_862+1994delATTTATTTATTTATTTATTT	ATL1	ENSG00000198513.14	transcript	ENST00000358385.12	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
ATL2_chr2_38288954_38382273	38325641	CACACACA others(13): Show CACACACACACACACACCAGT	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG03130.hp2 NA20129.hp1 HG01099.hp1 HG03130.hp2 NA20129.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0017 a0001c0003t0003 a0001c0003t0017	a0001c0003t0003g0129 a0001c0003t0003g0130 a0001c0003t0017g0026 a0001c0003t0003g0129 a0001c0003t0003g0130 a0001c0003t0017g0026	3	236	0.0127	-20	c.364 others(37): Show c.364-6642_364-6623delACTGGTGTGTGTGTGTGTGT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38325679	CACACACA others(13): Show CACACACACACACACACCAGT	C C	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA19064.hp1 NA18950.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0124 a0001c0001t0006g0139 a0001c0001t0002g0124 a0001c0001t0006g0139	2	236	0.0085	-20	c.364 others(37): Show c.364-6680_364-6661delACTGGTGTGTGTGTGTGTGT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38325898	TGTTTGTT others(13): Show TGTTTGTTTAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0151 a0001c0003t0001g0151	1	236	0.0042	-20	c.364 others(37): Show c.364-6899_364-6880delTTTTTTTTTTTTAAACAAAC	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	2/12			chr2	TogoVar
ATL2_chr2_38288954_38382273	38365148	CACACACA others(13): Show CACACACACACACACACAAAT	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0013 a0001c0003t0013	a0001c0003t0013g0003 a0001c0003t0013g0003	1	236	0.0042	-20	c.118 others(39): Show c.118+11975_118+11994delATTTGTGTGTGTGTGTGTGT	ATL2	ENSG00000119787.14	transcript	ENST00000378954.9	protein_coding	1/12			chr2	TogoVar
ATM_chr11_108218067_108374102	108354058	TACACACA others(13): Show TACACACACACAAACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18967.hp1 NA19000.hp1 others(1): Show NA18955.hp2 NA18967.hp1 NA19000.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0255 others(1): Show a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0255 a0001c0001t0001g0289	4	304	0.0132	-20	c.878 others(37): Show c.8786+190_8786+209delAACACACACACACACACACA	ATM	ENSG00000149311.21	transcript	ENST00000675843.1	protein_coding	60/62		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATOSA_chr15_52576321_52684388	52597165	GTTCTATT others(13): Show GTTCTATTCTATTCTATTCTA	G G	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0085 a0003c0004t0002g0085	1	362	0.0028	-20	c.264 others(39): Show c.2649+2942_2649+2961delTAGAATAGAATAGAATAGAA	ATOSA	ENSG00000047346.13	transcript	ENST00000619572.5	protein_coding	9/12			chr15	TogoVar
ATOSA_chr15_52576321_52684388	52622960	TATAAATA others(13): Show TATAAATAAATAAATAAATAA	T T	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02615.hp2 HG03130.hp1 others(10): Show HG00673.hp2 HG02615.hp2 HG03130.hp1 HG03209.hp1 HG03579.hp1 NA18522.hp1 NA18944.hp2 NA18949.hp2 NA18953.hp2 NA18978.hp2 NA18989.hp2 NA19057.hp1 NA19080.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0003 a0002c0002 a0007c0010 a0001c0003 a0002c0002 a0007c0010	a0001c0003t0001 a0002c0002t0001 a0007c0010t0001 a0001c0003t0001 a0002c0002t0001 a0007c0010t0001	a0001c0003t0001g0138 a0001c0003t0001g0140 a0001c0003t0001g0141 others(10): Show a0001c0003t0001g0138 a0001c0003t0001g0140 a0001c0003t0001g0141 a0001c0003t0001g0160 a0001c0003t0001g0161 a0001c0003t0001g0162 a0001c0003t0001g0165 a0001c0003t0001g0170 a0002c0002t0001g0281 a0002c0002t0001g0288 a0002c0002t0001g0290 a0007c0010t0001g0275 a0007c0010t0001g0276	13	362	0.0359	-20	c.17- others(35): Show c.17-9123_17-9104delTTATTTATTTATTTATTTAT	ATOSA	ENSG00000047346.13	transcript	ENST00000619572.5	protein_coding	2/12			chr15	TogoVar
ATOSB_chr9_35099117_35120862	35113629	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0151 a0001c0001t0001g0151	1	432	0.0023	-20	c.-22 others(39): Show c.-220+2156_-220+2175delATTTATTTATTTATTTATTT	ATOSB	ENSG00000005238.20	transcript	ENST00000322813.10	protein_coding	1/8			chr9	TogoVar
ATOSB_chr9_35099117_35120862	35113659	AATAAATA others(13): Show AATAAATAAATAAATAAAGAG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01255.hp1 HG01884.hp2 others(9): Show HG01109.hp2 HG01255.hp1 HG01884.hp2 HG02055.hp2 HG02451.hp2 HG03098.hp1 HG03195.hp1 HG03195.hp2 HG03654.hp2 HG03834.hp1 NA18522.hp2 NA20905.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0011 a0001c0002t0001 a0001c0002t0002 a0001c0002t0011	a0001c0002t0001g0013 a0001c0002t0001g0032 a0001c0002t0001g0061 others(3): Show a0001c0002t0001g0013 a0001c0002t0001g0032 a0001c0002t0001g0061 a0001c0002t0001g0159 a0001c0002t0002g0110 a0001c0002t0011g0062	12	432	0.0278	-20	c.-22 others(39): Show c.-220+2126_-220+2145delCTCTTTATTTATTTATTTAT	ATOSB	ENSG00000005238.20	transcript	ENST00000322813.10	protein_coding	1/8			chr9	TogoVar
ATP10A_chr15_25673712_25868327	25773818	CCACACAC others(13): Show CCACACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0049 a0049	a0049c0040 a0049c0040	a0049c0040t0001 a0049c0040t0001	a0049c0040t0001g0034 a0049c0040t0001g0034	1	300	0.0033	-20	c.654 others(37): Show c.654+7181_654+7200delTGTGTGTGTGTGTGTGTGTG	ATP10A	ENSG00000206190.13	transcript	ENST00000555815.7	protein_coding	2/20			chr15	TogoVar
ATP10B_chr5_160558120_160857211	160652430	CTTATTTA others(13): Show CTTATTTATTTATTTATTTAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02717.hp2 NA18906.hp2 others(1): Show HG01884.hp2 HG02717.hp2 NA18906.hp2 NA19043.hp2	a0001 a0001	a0001c0008 a0001c0029 a0001c0008 a0001c0029	a0001c0008t0019 a0001c0008t0037 a0001c0029t0047 a0001c0008t0019 a0001c0008t0037 a0001c0029t0047	a0001c0008t0019g0030 a0001c0008t0019g0087 a0001c0008t0037g0023 others(1): Show a0001c0008t0019g0030 a0001c0008t0019g0087 a0001c0008t0037g0023 a0001c0029t0047g0219	4	236	0.0170	-20	c.676 others(37): Show c.676-3194_676-3175delATAAATAAATAAATAAATAA	ATP10B	ENSG00000118322.14	transcript	ENST00000327245.10	protein_coding	7/25			chr5	TogoVar
ATP10B_chr5_160558120_160857211	160653159	AATATATA others(13): Show AATATATATTATATATACAAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02717.hp2 NA18906.hp2 others(1): Show HG01884.hp2 HG02717.hp2 NA18906.hp2 NA19043.hp2	a0001 a0001	a0001c0008 a0001c0029 a0001c0008 a0001c0029	a0001c0008t0019 a0001c0008t0037 a0001c0029t0047 a0001c0008t0019 a0001c0008t0037 a0001c0029t0047	a0001c0008t0019g0030 a0001c0008t0019g0087 a0001c0008t0037g0023 others(1): Show a0001c0008t0019g0030 a0001c0008t0019g0087 a0001c0008t0037g0023 a0001c0029t0047g0219	4	236	0.0170	-20	c.676 others(37): Show c.676-3923_676-3904delATTGTATATATAATATATAT	ATP10B	ENSG00000118322.14	transcript	ENST00000327245.10	protein_coding	7/25			chr5	TogoVar
ATP10B_chr5_160558120_160857211	160693403	AACACACA others(13): Show AACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0020 a0001c0001t0002g0020	1	236	0.0042	-20	c.-20 others(39): Show c.-204-4480_-204-4461delGTGTGTGTGTGTGTGTGTGT	ATP10B	ENSG00000118322.14	transcript	ENST00000327245.10	protein_coding	3/25			chr5	TogoVar
ATP10B_chr5_160558120_160857211	160755830	AAAAAAAA others(13): Show AAAAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0015 a0015	a0015c0024 a0015c0024	a0015c0024t0008 a0015c0024t0008	a0015c0024t0008g0178 a0015c0024t0008g0178	1	236	0.0042	-20	c.-33 others(41): Show c.-331+29709_-331+29728delATATATATATATTTTTTTTT	ATP10B	ENSG00000118322.14	transcript	ENST00000327245.10	protein_coding	2/25			chr5	TogoVar
ATP10B_chr5_160558120_160857211	160755832	AAAAAAAA others(13): Show AAAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0018 a0018	a0018c0036 a0018c0036	a0018c0036t0001 a0018c0036t0001	a0018c0036t0001g0081 a0018c0036t0001g0081	1	236	0.0042	-20	c.-33 others(41): Show c.-331+29707_-331+29726delATATATATATATATTTTTTT	ATP10B	ENSG00000118322.14	transcript	ENST00000327245.10	protein_coding	2/25			chr5	TogoVar
ATP10B_chr5_160558120_160857211	160755834	AAAAAATA others(13): Show AAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00673.hp2 NA18968.hp2 NA19083.hp2 HG00673.hp2 NA18968.hp2 NA19083.hp2	a0001 a0021 a0001 a0021	a0001c0001 a0001c0002 a0021c0034 a0001c0001 a0001c0002 a0021c0034	a0001c0001t0001 a0001c0002t0007 a0021c0034t0004 a0001c0001t0001 a0001c0002t0007 a0021c0034t0004	a0001c0001t0001g0118 a0001c0002t0007g0153 a0021c0034t0004g0055 a0001c0001t0001g0118 a0001c0002t0007g0153 a0021c0034t0004g0055	3	236	0.0127	-20	c.-33 others(41): Show c.-331+29705_-331+29724delATATATATATATATATTTTT	ATP10B	ENSG00000118322.14	transcript	ENST00000327245.10	protein_coding	2/25			chr5	TogoVar
ATP10B_chr5_160558120_160857211	160761383	GACATTCG others(13): Show GACATTCGCCAGCACCAGCCT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00438.hp1 others(165): Show HG00099.hp2 HG00323.hp2 HG00438.hp1 HG00621.hp2 HG00673.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01099.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01261.hp2 HG01346.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18942.hp1 NA18945.hp2 NA18948.hp1 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18968.hp1 NA18971.hp1 NA18972.hp2 NA18982.hp1 NA18986.hp2 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 others(16): Show a0001 a0002 a0003 a0004 a0006 a0007 a0008 a0009 a0010 a0011 a0013 a0014 a0015 a0017 a0019 a0020 a0022 a0023 a0025	a0001c0001 a0001c0002 a0001c0005 others(28): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0008 a0001c0011 a0001c0028 a0001c0029 a0002c0003 a0002c0004 a0002c0010 a0002c0013 a0002c0023 a0002c0037 a0003c0007 a0004c0009 a0006c0016 a0007c0015 a0008c0017 a0009c0018 a0010c0014 a0011c0019 a0013c0022 a0014c0025 a0015c0024 a0017c0027 a0019c0035 a0020c0030 a0022c0032 a0023c0031 a0025c0038	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(60): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0023 a0001c0001t0051 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0010 a0001c0002t0011 a0001c0002t0018 a0001c0002t0027 a0001c0002t0044 a0001c0002t0053 a0001c0005t0012 a0001c0005t0014 a0001c0006t0003 a0001c0006t0020 a0001c0006t0031 a0001c0008t0019 a0001c0008t0037 a0001c0008t0045 a0001c0011t0025 a0001c0011t0035 a0001c0011t0041 a0001c0028t0008 a0001c0029t0047 a0002c0003t0005 a0002c0003t0006 a0002c0004t0004 a0002c0004t0008 a0002c0004t0032 a0002c0004t0052 a0002c0010t0002 a0002c0010t0004 a0002c0010t0008 a0002c0013t0042 a0002c0013t0043 a0002c0023t0036 a0002c0037t0006 a0003c0007t0013 a0003c0007t0015 a0004c0009t0001 a0006c0016t0012 a0007c0015t0004 a0008c0017t0026 a0008c0017t0040 a0009c0018t0021 a0009c0018t0034 a0010c0014t0028 a0011c0019t0048 a0013c0022t0046 a0014c0025t0033 a0015c0024t0008 a0017c0027t0003 a0019c0035t0004 a0020c0030t0030 a0022c0032t0011 a0023c0031t0001 a0025c0038t0022	a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0038 others(165): Show a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0038 a0001c0001t0001g0052 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0072 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0083 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0147 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0166 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0182 a0001c0001t0001g0228 a0001c0001t0001g0230 a0001c0001t0002g0020 a0001c0001t0002g0024 a0001c0001t0002g0075 a0001c0001t0002g0079 a0001c0001t0002g0107 a0001c0001t0002g0126 a0001c0001t0002g0174 a0001c0001t0002g0199 a0001c0001t0002g0203 a0001c0001t0003g0041 a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0071 a0001c0001t0003g0088 a0001c0001t0003g0090 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0160 a0001c0001t0003g0191 a0001c0001t0004g0058 a0001c0001t0004g0125 a0001c0001t0004g0165 a0001c0001t0004g0232 a0001c0001t0008g0135 a0001c0001t0008g0168 a0001c0001t0008g0173 a0001c0001t0009g0031 a0001c0001t0009g0098 a0001c0001t0009g0208 a0001c0001t0023g0027 a0001c0001t0051g0227 a0001c0002t0005g0127 a0001c0002t0006g0068 a0001c0002t0006g0218 a0001c0002t0007g0076 a0001c0002t0007g0131 a0001c0002t0007g0167 a0001c0002t0007g0177 a0001c0002t0007g0180 a0001c0002t0007g0213 a0001c0002t0007g0223 a0001c0002t0007g0224 a0001c0002t0007g0225 a0001c0002t0007g0229 a0001c0002t0010g0211 a0001c0002t0011g0033 a0001c0002t0011g0084 a0001c0002t0011g0129 a0001c0002t0011g0144 a0001c0002t0011g0145 a0001c0002t0011g0226 a0001c0002t0018g0161 a0001c0002t0027g0051 a0001c0002t0044g0039 a0001c0002t0053g0236 a0001c0005t0012g0002 a0001c0005t0012g0006 a0001c0005t0014g0022 a0001c0006t0003g0104 a0001c0006t0003g0105 a0001c0006t0020g0184 a0001c0006t0031g0194 a0001c0008t0019g0030 a0001c0008t0019g0087 a0001c0008t0037g0023 a0001c0008t0045g0026 a0001c0011t0025g0028 a0001c0011t0035g0195 a0001c0011t0041g0001 a0001c0028t0008g0029 a0001c0029t0047g0219 a0002c0003t0005g0012 a0002c0003t0005g0013 a0002c0003t0005g0025 a0002c0003t0005g0057 a0002c0003t0005g0063 a0002c0003t0005g0089 a0002c0003t0005g0128 a0002c0003t0005g0150 a0002c0003t0005g0190 a0002c0003t0005g0192 a0002c0003t0005g0214 a0002c0003t0006g0037 a0002c0003t0006g0048 a0002c0003t0006g0054 a0002c0003t0006g0070 a0002c0003t0006g0097 a0002c0003t0006g0099 a0002c0003t0006g0100 a0002c0003t0006g0183 a0002c0003t0006g0220 a0002c0004t0004g0136 a0002c0004t0004g0146 a0002c0004t0004g0149 a0002c0004t0004g0204 a0002c0004t0004g0231 a0002c0004t0004g0233 a0002c0004t0008g0049 a0002c0004t0008g0050 a0002c0004t0008g0086 a0002c0004t0008g0096 a0002c0004t0008g0221 a0002c0004t0032g0234 a0002c0004t0052g0235 a0002c0010t0002g0200 a0002c0010t0004g0112 a0002c0010t0004g0142 a0002c0010t0008g0014 a0002c0013t0042g0179 a0002c0013t0043g0181 a0002c0023t0036g0148 a0002c0037t0006g0015 a0003c0007t0013g0189 a0003c0007t0013g0197 a0003c0007t0013g0222 a0003c0007t0015g0209 a0003c0007t0015g0215 a0004c0009t0001g0059 a0006c0016t0012g0164 a0006c0016t0012g0188 a0007c0015t0004g0176 a0007c0015t0004g0187 a0008c0017t0026g0005 a0008c0017t0040g0034 a0009c0018t0021g0205 a0009c0018t0034g0207 a0010c0014t0028g0141 a0011c0019t0048g0113 a0013c0022t0046g0056 a0014c0025t0033g0212 a0015c0024t0008g0178 a0017c0027t0003g0043 a0019c0035t0004g0062 a0020c0030t0030g0217 a0022c0032t0011g0036 a0023c0031t0001g0155 a0025c0038t0022g0133	168	236	0.7119	-20	c.-33 others(41): Show c.-331+24156_-331+24175delAGGCTGGTGCTGGCGAATGT	ATP10B	ENSG00000118322.14	transcript	ENST00000327245.10	protein_coding	2/25			chr5	TogoVar

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