Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
C21orf62_chr21_32785673_32818703	32809279	CCTTTCTT others(13): Show CCTTTCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0025 a0001c0002t0002g0025	1	303	0.0033	-20	c.-14 others(39): Show c.-140+1275_-140+1294delAAAGAAAGAAAGAAAGAAAG	C21orf62	ENSG00000205929.11	transcript	ENST00000479548.2	protein_coding	2/3			chr21	TogoVar
C22orf15_chr22_23757990_23770863	23761459	GGGAGGGG others(13): Show GGGAGGGGAGGGGAGGGGAGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	432	0.0023	-20	c.-18 others(31): Show c.-1847_-1828delGGAGGGGAGGGGAGGGGAGA	C22orf15	ENSG00000169314.15	transcript	ENST00000402217.8	protein_coding		1530		chr22	TogoVar
C22orf23_chr22_37938050_37958601	37940144	GCCGAGTG others(13): Show GCCGAGTGTGGTGGCTCATGC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0224 a0002c0003t0004g0224	1	374	0.0027	-20	c.40 others(31): Show c.4011_*4030delGCATGAGCCACCACACTCGG	C22orf23	ENSG00000128346.11	transcript	ENST00000403305.6	protein_coding		2905		chr22	TogoVar
C22orf31_chr22_29053672_29066831	29064675	ATTTTTTT others(13): Show ATTTTTTTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18992.hp2 NA19081.hp1 homoSapiens_chm13v2.hp1 NA18992.hp2 NA19081.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0001 a0002c0003t0001 a0001c0001t0001 a0001c0002t0001 a0002c0003t0001	a0001c0001t0001g0006 a0001c0002t0001g0035 a0002c0003t0001g0014 a0001c0001t0001g0006 a0001c0002t0001g0035 a0002c0003t0001g0014	3	472	0.0064	-20	c.-29 others(31): Show c.-2903_-2884delAAAAAAAAAAAAAAAAAAAA	C22orf31	ENSG00000100249.5	transcript	ENST00000216071.5	protein_coding		2845		chr22	TogoVar
C22orf31_chr22_29053672_29066831	29066539	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00735.hp2 HG01071.hp2 others(79): Show HG00438.hp1 HG00735.hp2 HG01071.hp2 HG01884.hp2 HG02040.hp2 HG02071.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02523.hp1 HG02572.hp2 HG02622.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp2 HG02735.hp2 HG02738.hp1 HG02922.hp2 HG03139.hp1 HG03209.hp2 HG03471.hp2 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03704.hp1 HG03831.hp1 HG03942.hp2 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18939.hp1 NA18944.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18966.hp2 NA18968.hp1 NA18972.hp1 NA18972.hp2 NA18977.hp1 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18985.hp2 NA18988.hp2 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA19001.hp1 NA19002.hp2 NA19004.hp2 NA19011.hp1 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19068.hp2 NA19074.hp2 NA19083.hp1 NA19085.hp2 NA19087.hp1 NA19088.hp2 NA19089.hp1 NA20129.hp2 NA21309.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0002c0003 others(4): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004 a0002c0005 a0002c0007 a0005c0009	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0002c0003t0001 a0002c0004t0001 a0002c0005t0001 a0002c0007t0001 a0005c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0041 a0001c0001t0001g0051 a0001c0001t0003g0117 a0001c0002t0001g0002 a0001c0002t0001g0009 a0001c0002t0001g0011 a0001c0002t0001g0016 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0032 a0001c0002t0001g0043 a0001c0002t0001g0048 a0001c0002t0001g0089 a0002c0003t0001g0005 a0002c0003t0001g0026 a0002c0003t0001g0031 a0002c0004t0001g0040 a0002c0004t0001g0046 a0002c0004t0001g0112 a0002c0004t0001g0113 a0002c0005t0001g0106 a0002c0005t0001g0107 a0002c0007t0001g0028 a0005c0009t0001g0066	82	472	0.1737	-20	c.-47 others(31): Show c.-4767_-4748delAAAAAAAAAAAAAAAAAAAA	C22orf31	ENSG00000100249.5	transcript	ENST00000216071.5	protein_coding		4709		chr22	TogoVar
C22orf42_chr22_32144006_32164303	32148227	GTGTGTGT others(13): Show GTGTGTGTGTGTACATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG02976.hp1 HG02976.hp2 others(4): Show HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03195.hp1 HG03453.hp1 HG03516.hp2 NA19240.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0011 a0002c0002t0002g0014 a0002c0002t0002g0039 a0002c0002t0002g0011 a0002c0002t0002g0014 a0002c0002t0002g0039	7	398	0.0176	-20	c.12 others(31): Show c.1293_*1312delTATATATGTACACACACACA	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		778		chr22	TogoVar
C22orf42_chr22_32144006_32164303	32148237	GTACATAT others(13): Show GTACATATATATATATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG02630.hp1 HG03041.hp1 others(1): Show HG01243.hp2 HG02630.hp1 HG03041.hp1 HG03130.hp1	a0002 a0002	a0002c0007 a0002c0011 a0002c0007 a0002c0011	a0002c0007t0002 a0002c0011t0002 a0002c0007t0002 a0002c0011t0002	a0002c0007t0002g0012 a0002c0011t0002g0029 a0002c0007t0002g0012 a0002c0011t0002g0029	4	398	0.0101	-20	c.12 others(31): Show c.1283_*1302delTATATATATATATATATGTA	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		768		chr22	TogoVar
C22orf42_chr22_32144006_32164303	32148240	CATATATA others(13): Show CATATATATATATATATATAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp2 NA18991.hp2 NA19010.hp2 others(1): Show HG01123.hp2 NA18991.hp2 NA19010.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0023 a0001c0001t0001g0003 a0001c0001t0001g0023	4	398	0.0101	-20	c.12 others(31): Show c.1280_*1299delATATATATATATATATATAT	C22orf42	ENSG00000205856.4	transcript	ENST00000382097.4	protein_coding		765		chr22	TogoVar
C2CD3_chr11_74007718_74176002	74077771	GTATATAT others(13): Show GTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA19064.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	318	0.0031	-20	c.460 others(37): Show c.4603+324_4603+343delTATATATATATATATATATA	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	23/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74077827	ATATATAT others(13): Show ATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02717.hp2 HG02886.hp2 others(9): Show HG01358.hp2 HG02717.hp2 HG02886.hp2 NA18945.hp1 NA18950.hp2 NA18956.hp1 NA18979.hp1 NA18988.hp1 NA18993.hp1 NA19062.hp1 NA19070.hp1 NA19085.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0008 a0010	a0001c0001 a0002c0005 a0003c0002 others(4): Show a0001c0001 a0002c0005 a0003c0002 a0003c0016 a0006c0012 a0008c0007 a0010c0011	a0001c0001t0001 a0002c0005t0001 a0003c0002t0001 others(4): Show a0001c0001t0001 a0002c0005t0001 a0003c0002t0001 a0003c0016t0001 a0006c0012t0001 a0008c0007t0001 a0010c0011t0001	a0001c0001t0001g0151 a0001c0001t0001g0179 a0002c0005t0001g0062 others(9): Show a0001c0001t0001g0151 a0001c0001t0001g0179 a0002c0005t0001g0062 a0002c0005t0001g0087 a0003c0002t0001g0267 a0003c0016t0001g0242 a0006c0012t0001g0231 a0008c0007t0001g0212 a0008c0007t0001g0216 a0008c0007t0001g0221 a0010c0011t0001g0053 a0010c0011t0001g0066	12	318	0.0377	-20	c.460 others(37): Show c.4603+268_4603+287delAATATATATATATATATATA	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	23/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74116856	GTATATAC others(13): Show GTATATACACGTGTATATGTA	G G	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0083 a0002c0003t0001g0083	1	318	0.0031	-20	c.152 others(39): Show c.1520+1352_1520+1371delTACATATACACGTGTATATA	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	9/32			chr11	TogoVar
C2CD3_chr11_74007718_74176002	74150507	AAAAAAAA others(13): Show AAAAAAAAACAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02895.hp2 HG03453.hp1 others(3): Show HG02647.hp1 HG02895.hp2 HG03453.hp1 NA18988.hp2 NA18993.hp2 NA19078.hp1	a0002 a0005 a0008 a0002 a0005 a0008	a0002c0003 a0002c0005 a0005c0006 others(1): Show a0002c0003 a0002c0005 a0005c0006 a0008c0007	a0002c0003t0001 a0002c0005t0001 a0005c0006t0001 others(1): Show a0002c0003t0001 a0002c0005t0001 a0005c0006t0001 a0008c0007t0001	a0002c0003t0001g0061 a0002c0003t0001g0090 a0002c0003t0001g0213 others(3): Show a0002c0003t0001g0061 a0002c0003t0001g0090 a0002c0003t0001g0213 a0002c0005t0001g0088 a0005c0006t0001g0014 a0008c0007t0001g0082	6	318	0.0189	-20	c.484 others(39): Show c.484-10699_484-10680delGTTTTTTTTTTGTTTTTTTT	C2CD3	ENSG00000168014.18	transcript	ENST00000334126.12	protein_coding	3/32			chr11	TogoVar
C2CD6_chr2_201482421_201624178	201541531	TTATATAT others(13): Show TTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00423.hp1 HG00621.hp2 others(39): Show HG00323.hp2 HG00423.hp1 HG00621.hp2 HG00639.hp2 HG01069.hp1 HG01071.hp1 HG01099.hp2 HG01261.hp1 HG02083.hp2 HG02109.hp2 HG02523.hp2 HG02622.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp1 HG03239.hp2 HG03491.hp2 HG03654.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG04204.hp1 NA18950.hp2 NA18953.hp1 NA18972.hp1 NA18974.hp2 NA18982.hp1 NA18986.hp2 NA19002.hp2 NA19005.hp1 NA19011.hp2 NA19030.hp2 NA19058.hp2 NA19060.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19077.hp1 NA19084.hp1 NA19086.hp1 NA19090.hp2	a0001 a0002 a0010 others(3): Show a0001 a0002 a0010 a0011 a0012 a0033	a0001c0001 a0002c0002 a0010c0013 others(3): Show a0001c0001 a0002c0002 a0010c0013 a0011c0012 a0012c0011 a0033c0017	a0001c0001t0001 a0002c0002t0001 a0010c0013t0001 others(3): Show a0001c0001t0001 a0002c0002t0001 a0010c0013t0001 a0011c0012t0001 a0012c0011t0001 a0033c0017t0001	a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 others(39): Show a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0098 a0001c0001t0001g0120 a0001c0001t0001g0151 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0163 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0235 a0001c0001t0001g0264 a0002c0002t0001g0253 a0010c0013t0001g0123 a0011c0012t0001g0121 a0011c0012t0001g0122 a0012c0011t0001g0073 a0033c0017t0001g0267	42	270	0.1556	-20	c.116 others(39): Show c.1162+3992_1162+4011delTATATATATATATATATATA	C2CD6	ENSG00000155754.15	transcript	ENST00000439140.6	protein_coding	11/15			chr2	TogoVar
C2CD6_chr2_201482421_201624178	201581477	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0001 a0004c0005t0001	a0004c0005t0001g0178 a0004c0005t0001g0178	1	270	0.0037	-20	c.639 others(35): Show c.639+598_639+617delATATATATATATATATATAT	C2CD6	ENSG00000155754.15	transcript	ENST00000439140.6	protein_coding	5/15			chr2	TogoVar
C2orf15_chr2_99136707_99156669	99136798	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp2 HG01081.hp2 HG01258.hp2 others(3): Show HG01071.hp2 HG01081.hp2 HG01258.hp2 HG01361.hp2 HG02738.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0153 a0001c0001t0002g0001 a0001c0001t0002g0153	6	414	0.0145	-20	c.-54 others(31): Show c.-5424_-5405delAAAAAAAAAAAAAAAAAAAA	C2orf15	ENSG00000273045.7	transcript	ENST00000650052.2	protein_coding		4908		chr2	TogoVar
C2orf68_chr2_85600254_85617066	85614979	AGTGTGGT others(13): Show AGTGTGGTGTGGTGTGGTGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01106.hp2 HG01515.hp2 others(1): Show HG00738.hp1 HG01106.hp2 HG01515.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0001 a0001c0001t0003g0003 a0001c0001t0003g0012 a0001c0001t0001g0001 a0001c0001t0003g0003 a0001c0001t0003g0012	4	376	0.0106	-20	c.-30 others(31): Show c.-3015_-2996delCACACCACACCACACCACAC	C2orf68	ENSG00000168887.11	transcript	ENST00000306336.6	protein_coding		2914		chr2	TogoVar
C2orf72_chr2_231032523_231054719	231037435	CGGGGGCC others(13): Show CGGGGGCCCGGGGGTCCGGCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0001	a0002c0007t0001g0111 a0002c0007t0001g0111	1	460	0.0022	-20	c.-13 others(29): Show c.-130_-111delGGGGGCCCGGGGGTCCGGCT	C2orf72	ENSG00000204128.6	transcript	ENST00000373640.5	protein_coding		87		chr2	TogoVar
C2orf81_chr2_74409177_74426619	74425900	AATGGTTG others(13): Show AATGGTTGATGTGGGAGTCAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0003 a0002c0003t0001g0003	1	402	0.0025	-20	c.-43 others(31): Show c.-4360_-4341delGTGACTCCCACATCAACCAT	C2orf81	ENSG00000284308.2	transcript	ENST00000684111.1	protein_coding		4282		chr2	TogoVar
C2orf88_chr2_190175863_190208484	190192452	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02486.hp2 HG02559.hp1 others(2): Show HG01884.hp2 HG02486.hp2 HG02559.hp1 HG02976.hp1 HG03139.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0016 a0003c0003t0001 a0001c0001t0001 a0002c0002t0016 a0003c0003t0001	a0001c0001t0001g0024 a0001c0001t0001g0300 a0002c0002t0016g0299 others(1): Show a0001c0001t0001g0024 a0001c0001t0001g0300 a0002c0002t0016g0299 a0003c0003t0001g0024	5	420	0.0119	-20	c.-16 others(39): Show c.-164-7225_-164-7206delGTGTGTGTGTGTGTGTGTGT	C2orf88	ENSG00000187699.10	transcript	ENST00000340623.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
C2orf92_chr2_97664713_97708066	97665725	CTCTCTCT others(13): Show CTCTCTCTCTCTCTATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	310	0.0032	-20	c.-40 others(31): Show c.-4063_-4044delTCTCTCTCTCTCTATATATA	C2orf92	ENSG00000228486.11	transcript	ENST00000627399.4	protein_coding		3987		chr2	TogoVar
C2orf92_chr2_97664713_97708066	97665727	CTCTCTCT others(13): Show CTCTCTCTCTCTATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0006 a0006	a0006c0010 a0006c0010	a0006c0010t0001 a0006c0010t0001	a0006c0010t0001g0079 a0006c0010t0001g0079	1	310	0.0032	-20	c.-40 others(31): Show c.-4061_-4042delTCTCTCTCTCTATATATATA	C2orf92	ENSG00000228486.11	transcript	ENST00000627399.4	protein_coding		3985		chr2	TogoVar
C2orf92_chr2_97664713_97708066	97665729	CTCTCTCT others(13): Show CTCTCTCTCTATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp1 HG03486.hp1 HG03209.hp1 HG03486.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0004c0004t0001 a0001c0001t0001 a0004c0004t0001	a0001c0001t0001g0106 a0004c0004t0001g0086 a0001c0001t0001g0106 a0004c0004t0001g0086	2	310	0.0065	-20	c.-40 others(31): Show c.-4059_-4040delTCTCTCTCTATATATATATA	C2orf92	ENSG00000228486.11	transcript	ENST00000627399.4	protein_coding		3983		chr2	TogoVar
C2orf92_chr2_97664713_97708066	97665731	CTCTCTCT others(13): Show CTCTCTCTATATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG03130.hp1 others(3): Show HG02895.hp2 HG02897.hp1 HG03130.hp1 HG03453.hp1 HG03579.hp1 NA20129.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0018 a0004c0004t0001g0080 a0004c0004t0001g0085 others(2): Show a0004c0004t0001g0018 a0004c0004t0001g0080 a0004c0004t0001g0085 a0004c0004t0001g0087 a0004c0004t0001g0088	6	310	0.0194	-20	c.-40 others(31): Show c.-4057_-4038delTCTCTCTATATATATATATA	C2orf92	ENSG00000228486.11	transcript	ENST00000627399.4	protein_coding		3981		chr2	TogoVar
C2orf92_chr2_97664713_97708066	97665733	CTCTCTAT others(13): Show CTCTCTATATATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp1 HG02970.hp2 HG01261.hp1 HG02970.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0004c0004t0001 a0001c0001t0001 a0004c0004t0001	a0001c0001t0001g0089 a0004c0004t0001g0083 a0001c0001t0001g0089 a0004c0004t0001g0083	2	310	0.0065	-20	c.-40 others(31): Show c.-4055_-4036delTCTCTATATATATATATATA	C2orf92	ENSG00000228486.11	transcript	ENST00000627399.4	protein_coding		3979		chr2	TogoVar
C3_chr19_6672704_6725650	6691989	AACACACA others(13): Show AACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02071.hp2 HG02647.hp1 others(9): Show HG00673.hp2 HG02071.hp2 HG02647.hp1 HG03927.hp1 NA18951.hp2 NA18952.hp1 NA18955.hp2 NA18975.hp1 NA18979.hp2 NA18980.hp2 NA19005.hp1 NA19010.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0007 a0001c0014 others(2): Show a0001c0001 a0001c0007 a0001c0014 a0001c0032 a0003c0036	a0001c0001t0001 a0001c0007t0002 a0001c0014t0001 others(2): Show a0001c0001t0001 a0001c0007t0002 a0001c0014t0001 a0001c0032t0001 a0003c0036t0001	a0001c0001t0001g0007 a0001c0001t0001g0141 a0001c0001t0001g0325 others(8): Show a0001c0001t0001g0007 a0001c0001t0001g0141 a0001c0001t0001g0325 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0007t0002g0083 a0001c0007t0002g0326 a0001c0007t0002g0328 a0001c0014t0001g0104 a0001c0032t0001g0198 a0003c0036t0001g0168	12	370	0.0324	-20	c.339 others(37): Show c.3390+915_3390+934delGTGTGTGTGTGTGTGTGTGT	C3	ENSG00000125730.18	transcript	ENST00000245907.11	protein_coding	26/40			chr19	TogoVar
C3orf18_chr3_50553025_50572747	50556555	AGTGTGTG others(13): Show AGTGTGTGTGTGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01243.hp1 HG02559.hp2 others(12): Show HG01109.hp1 HG01243.hp1 HG02559.hp2 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG03239.hp2 HG03540.hp2 HG03579.hp1 NA18967.hp2 NA18981.hp2 NA18990.hp1 NA19089.hp1 NA19240.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0017 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0017 a0002c0002t0001 a0002c0002t0006	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0017g0056 a0002c0002t0001g0004 a0002c0002t0006g0020	15	382	0.0393	-20	c.30 others(31): Show c.3082_*3101delACACACACACACACACACAC	C3orf18	ENSG00000088543.15	transcript	ENST00000357203.8	protein_coding		1469		chr3	TogoVar
C3orf20_chr3_14670141_14778036	14707445	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02486.hp1 HG02818.hp2 others(2): Show HG02055.hp1 HG02486.hp1 HG02818.hp2 HG03209.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0254 others(2): Show a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0254 a0001c0001t0001g0358 a0001c0001t0001g0360	5	380	0.0132	-20	c.116 others(39): Show c.1160+2855_1160+2874delGTGTGTGTGTGTGTGTGTGT	C3orf20	ENSG00000131379.10	transcript	ENST00000253697.8	protein_coding	7/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
C3orf20_chr3_14670141_14778036	14723777	GTTTTATT others(13): Show GTTTTATTTTATTTTATTTTA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp2 HG00609.hp2 others(82): Show HG00140.hp2 HG00544.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01069.hp2 HG01071.hp1 HG01109.hp2 HG01123.hp1 HG01192.hp1 HG01891.hp1 HG01981.hp2 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02717.hp1 HG02896.hp1 HG03017.hp2 HG03209.hp2 HG03225.hp1 HG03491.hp1 HG03492.hp2 HG03516.hp2 HG03654.hp2 HG03710.hp1 HG03834.hp2 HG03942.hp1 HG04204.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18939.hp1 NA18943.hp2 NA18944.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18954.hp2 NA18957.hp2 NA18959.hp1 NA18960.hp2 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18968.hp1 NA18970.hp1 NA18973.hp1 NA18974.hp1 NA18977.hp1 NA18980.hp1 NA18986.hp1 NA18990.hp2 NA18992.hp2 NA18999.hp1 NA19002.hp1 NA19003.hp1 NA19005.hp2 NA19010.hp2 NA19011.hp2 NA19054.hp1 NA19055.hp2 NA19064.hp2 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19090.hp1 NA20129.hp1 NA20905.hp1	a0001 a0002 a0004 others(8): Show a0001 a0002 a0004 a0005 a0009 a0015 a0017 a0019 a0020 a0021 a0027	a0001c0001 a0001c0024 a0002c0002 others(9): Show a0001c0001 a0001c0024 a0002c0002 a0004c0005 a0005c0004 a0009c0011 a0015c0032 a0017c0027 a0019c0029 a0020c0030 a0021c0033 a0027c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0024t0002 a0002c0002t0001 a0004c0005t0001 a0004c0005t0002 a0005c0004t0001 a0009c0011t0001 a0009c0011t0002 a0015c0032t0001 a0017c0027t0001 a0019c0029t0001 a0020c0030t0001 a0021c0033t0002 a0027c0013t0001	a0001c0001t0001g0007 a0001c0001t0001g0027 a0001c0001t0001g0113 others(81): Show a0001c0001t0001g0007 a0001c0001t0001g0027 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0255 a0001c0001t0001g0258 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0289 a0001c0001t0001g0294 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0306 a0001c0001t0001g0309 a0001c0001t0001g0316 a0001c0001t0001g0321 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0328 a0001c0001t0001g0331 a0001c0001t0001g0344 a0001c0001t0001g0348 a0001c0001t0001g0350 a0001c0001t0001g0351 a0001c0001t0001g0352 a0001c0001t0001g0355 a0001c0001t0001g0359 a0001c0001t0001g0362 a0001c0001t0001g0367 a0001c0001t0002g0036 a0001c0001t0002g0038 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0090 a0001c0001t0005g0117 a0001c0001t0006g0005 a0001c0001t0006g0280 a0001c0001t0006g0354 a0001c0024t0002g0037 a0002c0002t0001g0259 a0002c0002t0001g0269 a0002c0002t0001g0330 a0004c0005t0001g0004 a0004c0005t0001g0241 a0004c0005t0001g0296 a0004c0005t0002g0035 a0005c0004t0001g0182 a0005c0004t0001g0214 a0005c0004t0001g0216 a0009c0011t0001g0304 a0009c0011t0002g0034 a0015c0032t0001g0004 a0017c0027t0001g0366 a0019c0029t0001g0054 a0020c0030t0001g0349 a0021c0033t0002g0026 a0027c0013t0001g0248	85	380	0.2237	-20	c.156 others(39): Show c.1566+2041_1566+2060delTTATTTTATTTTATTTTATT	C3orf20	ENSG00000131379.10	transcript	ENST00000253697.8	protein_coding	10/16		INFO_REALIGN_3_PRIME	chr3	TogoVar
C3orf62_chr3_49263596_49282232	49281489	TATACACA others(13): Show TATACACACACACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02809.hp2 NA19043.hp1 HG02258.hp1 HG02809.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0001 a0001c0001t0013	a0001c0001t0001g0009 a0001c0001t0001g0041 a0001c0001t0013g0106 a0001c0001t0001g0009 a0001c0001t0001g0041 a0001c0001t0013g0106	3	326	0.0092	-20	c.-46 others(31): Show c.-4637_-4618delGTGTGTGTGTGTGTGTGTAT	C3orf62	ENSG00000188315.8	transcript	ENST00000343010.8	protein_coding		4258		chr3	TogoVar
C3orf70_chr3_185071838_185158060	185091947	ATATATAT others(13): Show ATATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0231	1	388	0.0026	-20	c.197 others(37): Show c.197-8404_197-8385delAAAATATATATATATATATA	C3orf70	ENSG00000187068.3	transcript	ENST00000335012.3	protein_coding	1/1			chr3	TogoVar
C3orf85_chr3_109131719_109156401	109145065	CTTCCTCA others(13): Show CTTCCTCAAATCAATCCTGTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02572.hp1 HG02615.hp2 others(3): Show HG01884.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02895.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0011 a0001c0001t0004g0011	6	370	0.0162	-20	c.50- others(35): Show c.50-3183_50-3164delTCAAATCAATCCTGTTTTCC	C3orf85	ENSG00000241224.8	transcript	ENST00000622536.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
C4BPA_chr1_207099233_207149972	207100053	CATGTGTG others(13): Show CATGTGTGTGTGTGTGTGTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0028 a0001c0006t0001g0028	1	342	0.0029	-20	c.-44 others(31): Show c.-4402_-4383delATGTGTGTGTGTGTGTGTGT	C4BPA	ENSG00000123838.11	transcript	ENST00000367070.8	protein_coding		4179		chr1	TogoVar
C4BPB_chr1_207083860_207104993	207100053	CATGTGTG others(13): Show CATGTGTGTGTGTGTGTGTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0036 a0001c0002t0001g0036	1	388	0.0026	-20	c.12 others(29): Show c.125_*144delATGTGTGTGTGTGTGTGTGT	C4BPB	ENSG00000123843.13	transcript	ENST00000367078.8	protein_coding		61		chr1	TogoVar
C4orf36_chr4_86871205_86897422	86893864	TTTTATTT others(13): Show TTTTATTTATTTATTTATTTA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG01891.hp1 HG02145.hp1 others(12): Show HG01109.hp1 HG01891.hp1 HG02145.hp1 HG02258.hp1 HG02451.hp2 HG02622.hp2 HG02630.hp1 HG02809.hp1 HG02922.hp1 HG02976.hp2 HG03130.hp2 HG03471.hp1 HG03486.hp1 HG03579.hp2 NA18522.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0003 a0004c0004t0008 a0004c0004t0003 a0004c0004t0008	a0004c0004t0003g0006 a0004c0004t0003g0043 a0004c0004t0003g0161 others(4): Show a0004c0004t0003g0006 a0004c0004t0003g0043 a0004c0004t0003g0161 a0004c0004t0003g0162 a0004c0004t0003g0163 a0004c0004t0003g0164 a0004c0004t0008g0064	15	386	0.0389	-20	c.-17 others(31): Show c.-1775_-1756delTAAATAAATAAATAAATAAA	C4orf36	ENSG00000163633.12	transcript	ENST00000295898.8	protein_coding		1443		chr4	TogoVar
C4orf45_chr4_158888134_159040229	159010686	TTTCTGGA others(13): Show TTTCTGGAACACAGCTCTCTG	T T	intron_variant intron_variant	MODIFIER	NA18998.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0097	1	264	0.0038	-20	c.64+ others(37): Show c.64+24327_64+24346delCAGAGAGCTGTGTTCCAGAA	C4orf45	ENSG00000164123.7	transcript	ENST00000434826.3	protein_coding	1/4			chr4	TogoVar
C4orf45_chr4_158888134_159040229	159023028	CAATAAAA others(13): Show CAATAAAATAAAATAAAATAA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG00558.hp1 others(67): Show HG00423.hp1 HG00438.hp1 HG00558.hp1 HG00639.hp2 HG00642.hp1 HG00738.hp1 HG01069.hp2 HG01081.hp2 HG01167.hp1 HG01169.hp1 HG01192.hp2 HG01257.hp1 HG01346.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01943.hp1 HG01981.hp1 HG02055.hp2 HG02080.hp1 HG02145.hp1 HG02258.hp2 HG02280.hp1 HG02300.hp2 HG02486.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp2 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02896.hp1 HG02976.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG03491.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp2 HG03942.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18522.hp1 NA18951.hp1 NA18957.hp1 NA18960.hp2 NA18965.hp2 NA18967.hp1 NA18989.hp2 NA18998.hp1 NA19003.hp1 NA19004.hp1 NA19004.hp2 NA19009.hp2 NA19058.hp1 NA19062.hp1 NA19068.hp1 NA19074.hp1 NA19087.hp1 NA19240.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0001 a0001c0002 a0002c0003 others(2): Show a0001c0001 a0001c0002 a0002c0003 a0004c0005 a0007c0009	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0002c0003t0001 a0004c0005t0001 a0007c0009t0001	a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 others(67): Show a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0042 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0159 a0001c0001t0001g0183 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0239 a0001c0001t0003g0088 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0005g0203 a0001c0002t0001g0024 a0002c0003t0001g0217 a0004c0005t0001g0053 a0004c0005t0001g0054 a0004c0005t0001g0063 a0004c0005t0001g0076 a0004c0005t0001g0083 a0007c0009t0001g0209 a0007c0009t0001g0210	70	264	0.2652	-20	c.64+ others(37): Show c.64+11985_64+12004delTTATTTTATTTTATTTTATT	C4orf45	ENSG00000164123.7	transcript	ENST00000434826.3	protein_coding	1/4			chr4	TogoVar
C4orf47_chr4_185421254_185454826	185426879	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0317 a0001c0001t0003g0317	1	358	0.0028	-20	c.-79 others(35): Show c.-79+500_-79+519delAAAAAAAAAAAAAAAAAAAA	C4orf47	ENSG00000205129.9	transcript	ENST00000378850.5	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
C4orf47_chr4_185421254_185454826	185443921	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01884.hp2 HG02040.hp1 others(34): Show HG00544.hp1 HG01884.hp2 HG02040.hp1 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02155.hp2 HG02258.hp1 HG02523.hp1 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02895.hp1 HG02970.hp1 HG03139.hp1 HG03195.hp1 HG03453.hp1 HG03654.hp1 HG03834.hp1 HG04204.hp1 HG04228.hp2 NA18942.hp1 NA18945.hp1 NA18964.hp2 NA19004.hp1 NA19009.hp1 NA19056.hp2 NA19079.hp1 NA20752.hp1 NA21309.hp1 NA21309.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0003 a0006c0011 a0001c0001 a0003c0003 a0006c0011	a0001c0001t0001 a0001c0001t0002 a0003c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0003c0003t0001 a0006c0011t0001	a0001c0001t0001g0005 a0001c0001t0001g0265 a0001c0001t0001g0268 others(29): Show a0001c0001t0001g0005 a0001c0001t0001g0265 a0001c0001t0001g0268 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0312 a0001c0001t0001g0315 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0077 a0001c0001t0002g0080 a0001c0001t0002g0120 a0001c0001t0002g0225 a0001c0001t0002g0255 a0001c0001t0002g0257 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0264 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0304 a0001c0001t0002g0311 a0003c0003t0001g0016 a0006c0011t0001g0305	37	358	0.1034	-20	c.715 others(37): Show c.715-1019_715-1000delTTTTTTTTTTTTTTTTTTTT	C4orf47	ENSG00000205129.9	transcript	ENST00000378850.5	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
C4orf50_chr4_5954375_6023431	5974393	AGCTACCA others(13): Show AGCTACCACGTCTGCAGGGGC	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0084 a0084	a0084c0098 a0084c0098	a0084c0098t0000 a0084c0098t0000	a0084c0098t0000g0286 a0084c0098t0000g0286	1	346	0.0029	-20	c.392 others(37): Show c.3922-572_3922-553delGCCCCTGCAGACGTGGTAGC	C4orf50	ENSG00000181215.17	transcript	ENST00000711657.1	protein_coding	8/11			chr4	TogoVar
C4orf54_chr4_99631529_99662828	99643739	AACACACA others(13): Show AACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0216 a0002c0002t0003g0216	1	392	0.0026	-20	c.37 others(37): Show c.37-2563_*37-2544delGTGTGTGTGTGTGTGTGTGT	C4orf54	ENSG00000248713.2	transcript	ENST00000511828.2	protein_coding	2/2			chr4	TogoVar
C5AR2_chr19_47327175_47352329	47335783	AAAAAAAA others(13): Show AAAAAAAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0083 a0004c0006t0083	a0004c0006t0083g0187 a0004c0006t0083g0187	1	406	0.0025	-20	c.-16 others(37): Show c.-16+3438_-16+3457delAAAAAAAAAAAAAAAAGAAA	C5AR2	ENSG00000134830.6	transcript	ENST00000595464.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr19	TogoVar
C5AR2_chr19_47327175_47352329	47336421	TTTCTTTC others(13): Show TTTCTTTCTTTCTTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01099.hp2 HG01123.hp2 others(36): Show HG00280.hp1 HG01099.hp2 HG01123.hp2 HG01175.hp2 HG01433.hp2 HG01884.hp1 HG01934.hp2 HG02015.hp2 HG02040.hp2 HG02109.hp1 HG02486.hp1 HG02738.hp1 HG02738.hp2 HG02922.hp1 HG03017.hp1 HG03139.hp2 HG03209.hp2 HG03471.hp1 HG03831.hp2 HG04115.hp2 HG04228.hp2 NA18747.hp1 NA18944.hp1 NA18951.hp2 NA18952.hp2 NA18964.hp2 NA18968.hp2 NA18970.hp2 NA18973.hp2 NA18979.hp2 NA19000.hp2 NA19001.hp2 NA19002.hp1 NA19006.hp2 NA19085.hp2 NA20129.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(18): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0017 a0001c0001t0023 a0001c0001t0028 a0001c0001t0029 a0001c0001t0033 a0001c0001t0034 a0001c0001t0041 a0001c0001t0055 a0001c0001t0058 a0001c0001t0063 a0001c0001t0070 a0001c0001t0071 a0001c0010t0026	a0001c0001t0001g0027 a0001c0001t0001g0034 a0001c0001t0001g0159 others(33): Show a0001c0001t0001g0027 a0001c0001t0001g0034 a0001c0001t0001g0159 a0001c0001t0003g0013 a0001c0001t0003g0016 a0001c0001t0003g0160 a0001c0001t0003g0220 a0001c0001t0004g0028 a0001c0001t0004g0104 a0001c0001t0004g0105 a0001c0001t0004g0155 a0001c0001t0004g0157 a0001c0001t0006g0123 a0001c0001t0006g0154 a0001c0001t0008g0048 a0001c0001t0008g0232 a0001c0001t0009g0122 a0001c0001t0012g0013 a0001c0001t0012g0016 a0001c0001t0012g0211 a0001c0001t0013g0034 a0001c0001t0017g0217 a0001c0001t0023g0106 a0001c0001t0023g0107 a0001c0001t0028g0013 a0001c0001t0028g0016 a0001c0001t0029g0196 a0001c0001t0033g0156 a0001c0001t0034g0048 a0001c0001t0041g0282 a0001c0001t0055g0072 a0001c0001t0058g0224 a0001c0001t0063g0013 a0001c0001t0070g0158 a0001c0001t0071g0179 a0001c0010t0026g0234	39	406	0.0961	-20	c.-16 others(37): Show c.-16+4076_-16+4095delTTTCTTTCTTTCCTTCCTTC	C5AR2	ENSG00000134830.6	transcript	ENST00000595464.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr19	TogoVar
C5_chr9_120947335_121055275	121002244	GTATATAT others(13): Show GTATATATATGTATATATGTA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01074.hp2 HG02015.hp1 others(6): Show HG00438.hp2 HG01074.hp2 HG02015.hp1 HG02040.hp2 HG02135.hp2 HG02148.hp1 HG03540.hp2 NA18981.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0015 others(1): Show a0001 a0003 a0015 a0019	a0001c0018 a0003c0003 a0003c0004 others(2): Show a0001c0018 a0003c0003 a0003c0004 a0015c0020 a0019c0021	a0001c0018t0001 a0003c0003t0001 a0003c0004t0001 others(2): Show a0001c0018t0001 a0003c0003t0001 a0003c0004t0001 a0015c0020t0001 a0019c0021t0001	a0001c0018t0001g0244 a0001c0018t0001g0248 a0003c0003t0001g0026 others(6): Show a0001c0018t0001g0244 a0001c0018t0001g0248 a0003c0003t0001g0026 a0003c0003t0001g0048 a0003c0004t0001g0018 a0003c0004t0001g0031 a0003c0004t0001g0032 a0015c0020t0001g0021 a0019c0021t0001g0245	9	276	0.0326	-20	c.256 others(39): Show c.2562+3655_2562+3674delTACATATATACATATATATA	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	20/40			chr9	TogoVar
C5_chr9_120947335_121055275	121018738	AAGGAAAG others(13): Show AAGGAAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0001 a0004c0005t0001	a0004c0005t0001g0217 a0004c0005t0001g0217	1	276	0.0036	-20	c.150 others(37): Show c.1507-906_1507-887delCCTTCCTTCCTTCCTTTCCT	C5	ENSG00000106804.10	transcript	ENST00000223642.3	protein_coding	12/40			chr9	TogoVar
C5orf34_chr5_43481709_43520148	43501347	AACACAAG others(13): Show AACACAAGACTGTGAACTCTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(154): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00733.hp1 HG00738.hp1 HG00741.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01517.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02074.hp1 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02300.hp2 HG02602.hp2 HG02698.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03195.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03492.hp2 HG03669.hp2 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG04184.hp1 HG04204.hp1 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18947.hp2 NA18950.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18955.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18978.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19006.hp2 NA19009.hp1 NA19043.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19065.hp2 NA19072.hp1 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19082.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp2 NA19086.hp1 NA19091.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0001c0008	a0001c0001t0001 a0001c0001t0005 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0003t0001 a0001c0004t0001 a0001c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0010 others(78): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0005g0116 a0001c0001t0005g0130 a0001c0001t0005g0138 a0001c0001t0005g0161 a0001c0001t0005g0178 a0001c0003t0001g0003 a0001c0003t0001g0012 a0001c0003t0001g0119 a0001c0003t0001g0129 a0001c0003t0001g0167 a0001c0004t0001g0006 a0001c0004t0001g0117 a0001c0004t0001g0118 a0001c0004t0001g0123 a0001c0004t0001g0156 a0001c0004t0001g0157 a0001c0004t0001g0172 a0001c0004t0001g0176 a0001c0004t0001g0177 a0001c0008t0001g0125	157	340	0.4618	-20	c.115 others(39): Show c.1152+1005_1152+1024delAAGAGTTCACAGTCTTGTGT	C5orf34	ENSG00000172244.9	transcript	ENST00000306862.7	protein_coding	6/12			chr5	TogoVar
C5orf34_chr5_43481709_43520148	43512760	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01517.hp1 HG02109.hp2 HG02145.hp1 others(14): Show HG01517.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02630.hp2 HG02976.hp2 HG03017.hp2 HG03130.hp2 HG03453.hp1 HG03516.hp2 HG06807.hp1 NA18906.hp1 NA18992.hp2 NA19058.hp1 NA19075.hp1 NA19076.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 a0001c0002t0009 a0001c0004t0001	a0001c0001t0001g0033 a0001c0001t0001g0173 a0001c0001t0001g0174 others(13): Show a0001c0001t0001g0033 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0004g0042 a0001c0002t0002g0105 a0001c0002t0002g0106 a0001c0002t0002g0107 a0001c0002t0002g0109 a0001c0002t0009g0108 a0001c0004t0001g0172 a0001c0004t0001g0176 a0001c0004t0001g0177	17	340	0.0500	-20	c.-37 others(37): Show c.-37+2026_-37+2045delAAAAAAAAAAAAAAAAAAAA	C5orf34	ENSG00000172244.9	transcript	ENST00000306862.7	protein_coding	1/12			chr5	TogoVar
C5orf46_chr5_147887722_147911538	147911208	GTCTATTC others(13): Show GTCTATTCTATTCTATTCTAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00621.hp2 HG02523.hp2 others(14): Show HG00408.hp2 HG00621.hp2 HG02523.hp2 NA18951.hp1 NA18968.hp1 NA18972.hp2 NA18980.hp2 NA18989.hp1 NA18992.hp2 NA18993.hp1 NA18997.hp2 NA19055.hp1 NA19057.hp2 NA19072.hp2 NA19088.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0003 a0002c0004 others(1): Show a0001c0001 a0002c0003 a0002c0004 a0003c0002	a0001c0001t0001 a0002c0003t0001 a0002c0003t0002 others(2): Show a0001c0001t0001 a0002c0003t0001 a0002c0003t0002 a0002c0004t0001 a0003c0002t0001	a0001c0001t0001g0104 a0002c0003t0001g0006 a0002c0003t0002g0012 others(4): Show a0001c0001t0001g0104 a0002c0003t0001g0006 a0002c0003t0002g0012 a0002c0004t0001g0032 a0002c0004t0001g0062 a0003c0002t0001g0002 a0003c0002t0001g0015	17	452	0.0376	-20	c.-47 others(31): Show c.-4727_-4708delATAGAATAGAATAGAATAGA	C5orf46	ENSG00000178776.5	transcript	ENST00000318315.5	protein_coding		4671		chr5	TogoVar
C6orf120_chr6_169697126_169711360	169706727	TACACACA others(13): Show TACACACACACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02300.hp1 NA19088.hp1 HG02300.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0000 a0001c0001t0004g0000 a0001c0001t0002g0000 a0001c0001t0004g0000	2	416	0.0048	-20	c.36 others(31): Show c.3693_*3712delACACACACACACACACACAC	C6orf120	ENSG00000185127.7	transcript	ENST00000332290.4	protein_coding		368		chr6	TogoVar
C6orf132_chr6_42096119_42147620	42123583	AAAGAAGA others(13): Show AAAGAAGAAGAAGAAAGAAGG	A A	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03471.hp2 HG03453.hp2 HG03471.hp2	a0002 a0005 a0002 a0005	a0002c0040 a0005c0028 a0002c0040 a0005c0028	a0002c0040t0002 a0005c0028t0062 a0002c0040t0002 a0005c0028t0062	a0002c0040t0002g0095 a0005c0028t0062g0355 a0002c0040t0002g0095 a0005c0028t0062g0355	2	364	0.0055	-20	c.252 others(37): Show c.252+5069_252+5088delCCTTCTTTCTTCTTCTTCTT	C6orf132	ENSG00000188112.10	transcript	ENST00000341865.9	protein_coding	2/4			chr6	TogoVar
C6orf141_chr6_49545668_49557095	49549869	TATAAATA others(13): Show TATAAATAAATAAATAAATAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02257.hp1 HG02258.hp2 others(7): Show HG02145.hp1 HG02257.hp1 HG02258.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp2 HG02717.hp2 HG03453.hp1 HG03453.hp2 HG06807.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0002 a0002c0003t0003 a0001c0001t0001 a0002c0003t0002 a0002c0003t0003	a0001c0001t0001g0000 a0002c0003t0002g0000 a0002c0003t0003g0000 a0001c0001t0001g0000 a0002c0003t0002g0000 a0002c0003t0003g0000	10	414	0.0242	-20	c.-92 others(29): Show c.-923_-904delATAAATAAATAAATAAATAA	C6orf141	ENSG00000197261.12	transcript	ENST00000529246.4	protein_coding		798		chr6	TogoVar

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