Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNTN1_chr12_40687439_41077415	40690769	ATTATTTT others(13): Show ATTATTTTATTTTATTTTATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00673.hp1 HG00733.hp2 others(25): Show HG00099.hp2 HG00673.hp1 HG00733.hp2 HG01074.hp2 HG01433.hp2 HG01496.hp2 HG01884.hp2 HG02004.hp2 HG02027.hp1 HG02083.hp2 HG02622.hp1 HG02886.hp1 HG02895.hp1 HG03098.hp1 HG03540.hp2 NA18747.hp2 NA18952.hp2 NA18957.hp1 NA18972.hp1 NA18977.hp1 NA18984.hp2 NA18988.hp2 NA18989.hp1 NA19011.hp2 NA19012.hp1 NA19065.hp2 NA19091.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0009 a0002c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0017 a0001c0002t0001 a0001c0002t0010 a0001c0003t0002 a0001c0004t0002 a0001c0005t0002 a0001c0009t0004 a0002c0007t0008	a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 others(25): Show a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0208 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0146 a0001c0001t0002g0159 a0001c0001t0004g0137 a0001c0001t0004g0216 a0001c0001t0005g0135 a0001c0001t0006g0138 a0001c0001t0006g0139 a0001c0001t0006g0140 a0001c0001t0013g0133 a0001c0001t0017g0187 a0001c0002t0001g0034 a0001c0002t0001g0109 a0001c0002t0001g0129 a0001c0002t0001g0132 a0001c0002t0001g0136 a0001c0002t0001g0142 a0001c0002t0010g0127 a0001c0003t0002g0128 a0001c0004t0002g0008 a0001c0005t0002g0173 a0001c0009t0004g0046 a0002c0007t0008g0009	28	230	0.1217	-20	c.-18 others(31): Show c.-1899_-1880delTTATTTTATTTTATTTTATT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding		1669		chr12	TogoVar
CNTN1_chr12_40687439_41077415	40707221	CTTTTTCT others(13): Show CTTTTTCTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18980.hp1 NA18980.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	230	0.0044	-20	c.-77 others(39): Show c.-77+14635_-77+14654delCTTTTTTTTTTTTTTTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40707227	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	230	0.0044	-20	c.-77 others(39): Show c.-77+14655_-77+14674delTTTTTTTTTTTTTTTTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40795301	ACACACAC others(13): Show ACACACACACACACACACATT	A A	intron_variant intron_variant	MODIFIER	HG01255.hp2 NA18984.hp1 HG01255.hp2 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0118 a0001c0002t0001g0035 a0001c0001t0001g0118 a0001c0002t0001g0035	2	230	0.0087	-20	c.-77 others(41): Show c.-77+102710_-77+102729delCACACACACACACACACATT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	40872208	TTGTTTGT others(13): Show TTGTTTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03130.hp1 HG03471.hp1 HG02109.hp2 HG03130.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0003 a0001c0001t0007	a0001c0001t0003g0222 a0001c0001t0003g0224 a0001c0001t0007g0055 a0001c0001t0003g0222 a0001c0001t0003g0224 a0001c0001t0007g0055	3	230	0.0130	-20	c.-76 others(39): Show c.-76-36145_-76-36126delTTGTGTGTGTGTGTGTGTGT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40961650	TAAGATTT others(13): Show TAAGATTTTCGTAGCCAGCAA	T T	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0012 a0001c0001t0012g0012	1	230	0.0044	-20	c.180 others(39): Show c.1804+2417_1804+2436delAAGATTTTCGTAGCCAGCAA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	15/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	40975178	TTATATAT others(13): Show TTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00438.hp2 HG00621.hp1 others(34): Show HG00099.hp1 HG00438.hp2 HG00621.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG01069.hp2 HG01074.hp1 HG01099.hp2 HG01109.hp1 HG01255.hp1 HG01496.hp2 HG02145.hp1 HG02148.hp1 HG02273.hp1 HG02273.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp2 HG03486.hp1 HG03654.hp1 HG03704.hp2 HG03927.hp2 NA18522.hp1 NA18747.hp2 NA18952.hp1 NA18961.hp2 NA18964.hp1 NA18972.hp1 NA18973.hp1 NA18977.hp1 NA18980.hp1 NA18989.hp2 NA19030.hp1 NA19043.hp2 NA19066.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 others(1): Show a0001c0001 a0001c0004 a0001c0006 a0001c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0024 a0001c0004t0003 a0001c0004t0007 a0001c0006t0006 a0001c0012t0021	a0001c0001t0001g0037 a0001c0001t0001g0076 a0001c0001t0001g0077 others(34): Show a0001c0001t0001g0037 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0107 a0001c0001t0001g0160 a0001c0001t0001g0201 a0001c0001t0001g0208 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0002g0059 a0001c0001t0004g0029 a0001c0001t0004g0086 a0001c0001t0004g0093 a0001c0001t0004g0115 a0001c0001t0004g0134 a0001c0001t0004g0137 a0001c0001t0004g0179 a0001c0001t0004g0216 a0001c0001t0005g0020 a0001c0001t0005g0135 a0001c0001t0006g0106 a0001c0001t0007g0006 a0001c0001t0007g0058 a0001c0001t0010g0202 a0001c0001t0024g0167 a0001c0004t0003g0168 a0001c0004t0003g0171 a0001c0004t0007g0057 a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 a0001c0006t0006g0021 a0001c0006t0006g0051 a0001c0006t0006g0119 a0001c0012t0021g0204	37	230	0.1609	-20	c.180 others(39): Show c.1805-5705_1805-5686delATATATATATATATATATAT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40982708	AAAACCTG others(13): Show AAAACCTGTCTTCAAGGAGCT	A A	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0021 a0001c0012t0021	a0001c0012t0021g0204 a0001c0012t0021g0204	1	230	0.0044	-20	c.196 others(39): Show c.1963+1642_1963+1661delAAACCTGTCTTCAAGGAGCT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	16/23			chr12	TogoVar
CNTN2_chr1_205038212_205083289	205080525	TACACACA others(13): Show TACACACACACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0059 a0002c0002t0002g0059	1	380	0.0026	-20	c.67 others(31): Show c.6761_*6780delACACACACACACACACACAC	CNTN2	ENSG00000184144.12	transcript	ENST00000331830.7	protein_coding		2237		chr1	TogoVar
CNTN3_chr3_74257568_74619659	74285790	GATATATA others(13): Show GATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01952.hp1 HG02129.hp2 others(4): Show HG01884.hp1 HG01952.hp1 HG02129.hp2 HG02922.hp2 HG03209.hp2 NA18981.hp1 NA19030.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0003 a0001c0001 a0001c0002 a0003c0003	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(2): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0002t0007 a0003c0003t0007	a0001c0001t0001g0099 a0001c0001t0001g0112 a0001c0001t0001g0118 others(4): Show a0001c0001t0001g0099 a0001c0001t0001g0112 a0001c0001t0001g0118 a0001c0001t0008g0003 a0001c0001t0009g0084 a0001c0002t0007g0018 a0003c0003t0007g0020	7	174	0.0402	-20	c.251 others(37): Show c.2518-319_2518-300delATATATATATATATATATAT	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	19/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74344397	GTTTTTTT others(13): Show GTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02486.hp1 HG02622.hp1 others(4): Show HG02280.hp2 HG02486.hp1 HG02622.hp1 HG02647.hp1 HG02895.hp2 HG02896.hp1 NA19043.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0004 a0002c0005 others(2): Show a0001c0002 a0002c0004 a0002c0005 a0002c0015 a0003c0003	a0001c0002t0019 a0002c0004t0028 a0002c0005t0002 others(3): Show a0001c0002t0019 a0002c0004t0028 a0002c0005t0002 a0002c0005t0023 a0002c0015t0013 a0003c0003t0024	a0001c0002t0019g0002 a0002c0004t0028g0137 a0002c0005t0002g0037 others(4): Show a0001c0002t0019g0002 a0002c0004t0028g0137 a0002c0005t0002g0037 a0002c0005t0002g0066 a0002c0005t0023g0032 a0002c0015t0013g0019 a0003c0003t0024g0075	7	174	0.0402	-20	c.136 others(39): Show c.1365-7759_1365-7740delAAAAAAAAAAAAAAAAAAAA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	11/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74460772	CATATATA others(13): Show CATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03225.hp2 HG03486.hp1 others(1): Show HG02257.hp1 HG03225.hp2 HG03486.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0003c0023 others(1): Show a0001c0001 a0001c0002 a0003c0023 a0004c0011	a0001c0001t0008 a0001c0002t0002 a0003c0023t0016 others(1): Show a0001c0001t0008 a0001c0002t0002 a0003c0023t0016 a0004c0011t0002	a0001c0001t0008g0001 a0001c0002t0002g0044 a0003c0023t0016g0096 others(1): Show a0001c0001t0008g0001 a0001c0002t0002g0044 a0003c0023t0016g0096 a0004c0011t0002g0045	4	174	0.0230	-20	c.358 others(39): Show c.358+25664_358+25683delATATATATATATATATATAT	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	4/22			chr3	TogoVar
CNTN4_chr3_2093866_3062959	2269902	GTTTGTTT others(13): Show GTTTGTTTGTTTGTTTATTTA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00738.hp1 others(8): Show HG00140.hp1 HG00639.hp2 HG00738.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01978.hp1 HG02165.hp2 HG02486.hp2 HG02523.hp2 HG03239.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0007 a0001c0003t0002 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0007c0018t0003	a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 others(8): Show a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 a0001c0002t0007g0112 a0001c0003t0002g0061 a0001c0003t0011g0113 a0001c0004t0001g0097 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0044 a0007c0018t0003g0062	11	116	0.0948	-20	c.-14 others(41): Show c.-144-69272_-144-69253delGTTTGTTTGTTTATTTATTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2269910	GTTTGTTT others(13): Show GTTTGTTTATTTATTTATTTA	G G	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0040 a0001c0003t0006g0040	1	116	0.0086	-20	c.-14 others(41): Show c.-144-69264_-144-69245delGTTTATTTATTTATTTATTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2708727	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0004 a0001c0006t0004	a0001c0006t0004g0004 a0001c0006t0004g0004	1	116	0.0086	-20	c.56- others(37): Show c.56-27466_56-27447delACACACACACACACACACAC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99063507	CATAAATA others(13): Show CATAAATAAATAAATAAATAA	C C	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02004.hp1 HG02258.hp1 others(6): Show HG01496.hp1 HG02004.hp1 HG02258.hp1 HG02723.hp1 HG02976.hp1 HG03041.hp1 HG03130.hp2 HG03471.hp2 NA18522.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0009 a0010	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0009c0012 a0010c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0002c0002t0021 a0003c0003t0007 a0009c0012t0008 a0010c0010t0011	a0001c0001t0001g0008 a0001c0001t0001g0054 a0001c0001t0004g0029 others(6): Show a0001c0001t0001g0008 a0001c0001t0001g0054 a0001c0001t0004g0029 a0001c0001t0006g0040 a0002c0002t0021g0055 a0003c0003t0007g0034 a0003c0003t0007g0057 a0009c0012t0008g0026 a0010c0010t0011g0009	9	66	0.1364	-20	c.-21 others(41): Show c.-210+42263_-210+42282delTAAATAAATAAATAAATAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99284600	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG03130.hp2 NA20300.hp1 HG03130.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0005 a0001c0001t0006	a0001c0001t0005g0048 a0001c0001t0006g0040 a0001c0001t0005g0048 a0001c0001t0006g0040	2	66	0.0303	-20	c.-20 others(41): Show c.-209-40704_-209-40685delTGTGTGTGTGTGTGTGTGTG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99383069	CTGGTCTT others(13): Show CTGGTCTTGAACTCCTGACCT	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02258.hp1 HG02886.hp1 others(1): Show HG01169.hp1 HG02258.hp1 HG02886.hp1 HG02976.hp1	a0001 a0003 a0010 a0001 a0003 a0010	a0001c0001 a0003c0003 a0010c0010 a0001c0001 a0003c0003 a0010c0010	a0001c0001t0009 a0003c0003t0002 a0003c0003t0007 others(1): Show a0001c0001t0009 a0003c0003t0002 a0003c0003t0007 a0010c0010t0011	a0001c0001t0009g0043 a0003c0003t0002g0027 a0003c0003t0007g0034 others(1): Show a0001c0001t0009g0043 a0003c0003t0002g0027 a0003c0003t0007g0034 a0010c0010t0011g0009	4	66	0.0606	-20	c.-71 others(39): Show c.-71+57588_-71+57607delGTCTTGAACTCCTGACCTTG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523644	TAGAATAG others(13): Show TAGAATAGAACAGAACAGATC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02723.hp1 HG02257.hp1 HG02723.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0011 a0001c0001 a0003c0011	a0001c0001t0001 a0003c0011t0019 a0001c0001t0001 a0003c0011t0019	a0001c0001t0001g0008 a0003c0011t0019g0059 a0001c0001t0001g0008 a0003c0011t0019g0059	2	66	0.0303	-20	c.-70 others(39): Show c.-70-32496_-70-32477delTAGAACAGAACAGATCAGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523649	TAGAACAG others(13): Show TAGAACAGAACAGATCAGAAC	T T	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0007 a0008c0008t0007	a0008c0008t0007g0038 a0008c0008t0007g0038	1	66	0.0152	-20	c.-70 others(39): Show c.-70-32482_-70-32463delTCAGAACAGAACAGAACAGA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523694	CAGAATAG others(13): Show CAGAATAGAACAGAATAGAAT	C C	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02895.hp2 NA18939.hp1 HG02735.hp1 HG02895.hp2 NA18939.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0003 a0004c0004 a0001c0001 a0003c0003 a0004c0004	a0001c0001t0006 a0003c0003t0017 a0004c0004t0013 a0001c0001t0006 a0003c0003t0017 a0004c0004t0013	a0001c0001t0006g0032 a0003c0003t0017g0065 a0004c0004t0013g0050 a0001c0001t0006g0032 a0003c0003t0017g0065 a0004c0004t0013g0050	3	66	0.0455	-20	c.-70 others(39): Show c.-70-32441_-70-32422delCAGAATAGAATAGAATAGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99556554	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0010 a0005c0005t0010	a0005c0005t0010g0006 a0005c0005t0010g0006	1	66	0.0152	-20	c.55+ others(33): Show c.55+306_55+325delATATATATATATATATATAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99732418	AACTCAGT others(13): Show AACTCAGTATAATAACTGAGT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01123.hp1 HG00733.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0009 a0001c0001t0003 a0001c0001t0009	a0001c0001t0003g0060 a0001c0001t0009g0063 a0001c0001t0003g0060 a0001c0001t0009g0063	2	66	0.0303	-20	c.56- others(37): Show c.56-87103_56-87084delTCAGTATAATAACTGAGTAC	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99934898	GTATATAT others(13): Show GTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01123.hp2 HG01169.hp2 others(2): Show HG01099.hp1 HG01123.hp2 HG01169.hp2 HG02004.hp1 HG02735.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0003 a0006c0006 a0001c0001 a0003c0003 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0003c0003t0002 others(1): Show a0001c0001t0001 a0001c0001t0004 a0003c0003t0002 a0006c0006t0001	a0001c0001t0001g0054 a0001c0001t0004g0010 a0003c0003t0002g0012 others(2): Show a0001c0001t0001g0054 a0001c0001t0004g0010 a0003c0003t0002g0012 a0003c0003t0002g0061 a0006c0006t0001g0005	5	66	0.0758	-20	c.673 others(39): Show c.673+18780_673+18799delTATATATATATATATATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99934929	TATATATA others(13): Show TATATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03041.hp1 HG02976.hp1 HG03041.hp1	a0003 a0009 a0003 a0009	a0003c0003 a0009c0012 a0003c0003 a0009c0012	a0003c0003t0007 a0009c0012t0008 a0003c0003t0007 a0009c0012t0008	a0003c0003t0007g0034 a0009c0012t0008g0026 a0003c0003t0007g0034 a0009c0012t0008g0026	2	66	0.0303	-20	c.673 others(39): Show c.673+18782_673+18801delTATATATATATATATATACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100094765	AAAGGAAG others(13): Show AAAGGAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0009 a0006c0006t0009	a0006c0006t0009g0042 a0006c0006t0009g0042	1	66	0.0152	-20	c.158 others(41): Show c.1580+20506_1580+20525delGGAAGGAAGGAAGGAAGGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100161830	TACACACA others(13): Show TACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0039 a0002c0002t0004g0039	1	66	0.0152	-20	c.158 others(41): Show c.1581-29272_1581-29253delCACACACACACACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100204295	CTAATATA others(13): Show CTAATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0012 a0003c0003t0002g0012	1	66	0.0152	-20	c.188 others(41): Show c.1884+10633_1884+10652delTAATATATATATATATATAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	15/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	100204297	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0011 a0011	a0011c0009 a0011c0009	a0011c0009t0005 a0011c0009t0005	a0011c0009t0005g0056 a0011c0009t0005g0056	1	66	0.0152	-20	c.188 others(41): Show c.1884+10662_1884+10681delTATATATATATATATATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	15/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1202543	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00733.hp2 HG00735.hp1 others(10): Show HG00140.hp1 HG00733.hp2 HG00735.hp1 HG00741.hp2 HG01071.hp1 HG01361.hp1 HG01496.hp1 HG01943.hp2 HG02717.hp1 HG03492.hp2 HG03834.hp2 HG04204.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0005 others(2): Show a0001c0002 a0001c0004 a0001c0005 a0001c0008 a0001c0010	a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 others(4): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0004t0001 a0001c0005t0002 a0001c0008t0001 a0001c0010t0001	a0001c0002t0001g0098 a0001c0002t0001g0116 a0001c0002t0001g0122 others(10): Show a0001c0002t0001g0098 a0001c0002t0001g0116 a0001c0002t0001g0122 a0001c0002t0001g0125 a0001c0002t0002g0021 a0001c0002t0005g0050 a0001c0004t0001g0055 a0001c0004t0001g0066 a0001c0004t0001g0123 a0001c0005t0002g0115 a0001c0008t0001g0167 a0001c0008t0001g0169 a0001c0010t0001g0056	13	232	0.0560	-20	c.56- others(37): Show c.56-18118_56-18099delAATAAATAAATAAATAAATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245262	TATATATA others(13): Show TATATATATATATACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0005 a0005	a0005c0026 a0005c0026	a0005c0026t0001 a0005c0026t0001	a0005c0026t0001g0091 a0005c0026t0001g0091	1	232	0.0043	-20	c.358 others(39): Show c.358+17281_358+17300delTACACACACATATATATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1300449	CAGGAAGG others(13): Show CAGGAAGGAAGGAAGGAAGGA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02109.hp2 HG02145.hp2 others(20): Show HG01884.hp1 HG02109.hp2 HG02145.hp2 HG02280.hp1 HG02451.hp1 HG02630.hp2 HG02647.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA19030.hp2 NA19043.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0002c0011	a0001c0001t0001 a0001c0002t0001 a0001c0002t0008 others(8): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0008 a0001c0003t0001 a0001c0005t0001 a0001c0005t0004 a0001c0006t0001 a0001c0006t0004 a0001c0007t0001 a0001c0008t0001 a0002c0011t0001	a0001c0001t0001g0190 a0001c0002t0001g0209 a0001c0002t0008g0221 others(20): Show a0001c0001t0001g0190 a0001c0002t0001g0209 a0001c0002t0008g0221 a0001c0003t0001g0042 a0001c0003t0001g0177 a0001c0005t0001g0159 a0001c0005t0001g0189 a0001c0005t0001g0193 a0001c0005t0001g0207 a0001c0005t0004g0194 a0001c0006t0001g0037 a0001c0006t0001g0111 a0001c0006t0001g0216 a0001c0006t0001g0229 a0001c0006t0004g0119 a0001c0007t0001g0133 a0001c0007t0001g0134 a0001c0007t0001g0135 a0001c0008t0001g0143 a0001c0008t0001g0197 a0001c0008t0001g0211 a0001c0008t0001g0218 a0002c0011t0001g0217	23	232	0.0991	-20	c.761 others(37): Show c.761+2484_761+2503delGGAAGGAAGGAAGGAAGGAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1300557	AAAAGAAA others(13): Show AAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0020 a0001c0020	a0001c0020t0001 a0001c0020t0001	a0001c0020t0001g0151 a0001c0020t0001g0151	1	232	0.0043	-20	c.761 others(37): Show c.761+2596_761+2615delAAGAAAGAAAGAAAGAAAGA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTNAP2_chr7_146111801_148425998	146151662	ATATATAT others(13): Show ATATATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0040 a0001c0002t0002g0040	1	40	0.0250	-20	c.97+ others(37): Show c.97+34705_97+34724delATATGTATATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146151678	ATATGTAT others(13): Show ATATGTATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0001 a0001c0015t0001	a0001c0015t0001g0011 a0001c0015t0001g0011	1	40	0.0250	-20	c.97+ others(37): Show c.97+34709_97+34728delGTATATATATATATATGTAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146285735	CCTCGCCT others(13): Show CCTCGCCTCCTCTCCGCTCCT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02886.hp1 HG01891.hp2 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0006 a0001c0003t0013 a0001c0001t0006 a0001c0003t0013	a0001c0001t0006g0009 a0001c0003t0013g0010 a0001c0001t0006g0009 a0001c0003t0013g0010	2	40	0.0500	-20	c.97+ others(39): Show c.97+168763_97+168782delCTCGCCTCCTCTCCGCTCCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23			chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146285886	TTCCCTTC others(13): Show TTCCCTTCCCCTCCCCTCCCC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0007 a0001c0002t0001g0007	1	40	0.0250	-20	c.97+ others(39): Show c.97+168954_97+168973delTCCCTTCCCCTCCCCTCCCC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146356052	TACACACA others(13): Show TACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02922.hp2 HG02976.hp1 others(2): Show HG02630.hp2 HG02922.hp2 HG02976.hp1 NA19030.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0004 a0001c0010 others(2): Show a0001c0002 a0001c0004 a0001c0010 a0001c0015 a0002c0016	a0001c0002t0002 a0001c0004t0005 a0001c0010t0002 others(2): Show a0001c0002t0002 a0001c0004t0005 a0001c0010t0002 a0001c0015t0001 a0002c0016t0004	a0001c0002t0002g0013 a0001c0004t0005g0004 a0001c0010t0002g0014 others(2): Show a0001c0002t0002g0013 a0001c0004t0005g0004 a0001c0010t0002g0014 a0001c0015t0001g0011 a0002c0016t0004g0024	5	40	0.1250	-20	c.97+ others(39): Show c.97+239102_97+239121delACACACACACACACACACAC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146457481	AATATATA others(13): Show AATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0013 a0001c0003t0013	a0001c0003t0013g0010 a0001c0003t0013g0010	1	40	0.0250	-20	c.98- others(39): Show c.98-316754_98-316735delTATATATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146761284	TGGAAGGA others(13): Show TGGAAGGAAGGAAGGAAGGAA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02717.hp2 HG02976.hp1 others(4): Show HG02451.hp2 HG02717.hp2 HG02976.hp1 HG03098.hp1 HG03139.hp1 HG03225.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0008 others(3): Show a0001c0001 a0001c0005 a0001c0008 a0001c0009 a0001c0013 a0001c0015	a0001c0001t0001 a0001c0001t0002 a0001c0005t0008 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0008 a0001c0008t0001 a0001c0009t0019 a0001c0013t0003 a0001c0015t0001	a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0005t0008g0005 others(4): Show a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0005t0008g0005 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0013t0003g0039 a0001c0015t0001g0011	7	40	0.1750	-20	c.98- others(37): Show c.98-12954_98-12935delGGAAGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146851650	CTGTGTGT others(13): Show CTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02630.hp2 HG02717.hp1 others(1): Show HG02486.hp2 HG02630.hp2 HG02717.hp1 HG03098.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0017 a0001c0002 a0001c0003 a0002c0017	a0001c0002t0001 a0001c0002t0002 a0001c0003t0011 others(1): Show a0001c0002t0001 a0001c0002t0002 a0001c0003t0011 a0002c0017t0015	a0001c0002t0001g0021 a0001c0002t0002g0013 a0001c0003t0011g0023 others(1): Show a0001c0002t0001g0021 a0001c0002t0002g0013 a0001c0003t0011g0023 a0002c0017t0015g0037	4	40	0.1000	-20	c.402 others(39): Show c.402+11778_402+11797delGTGTGTGTGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146855807	GTATATAT others(13): Show GTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02630.hp1 HG02886.hp1 others(2): Show HG02451.hp1 HG02630.hp1 HG02886.hp1 HG03098.hp2 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0010 others(1): Show a0001c0002 a0001c0003 a0001c0010 a0001c0012	a0001c0002t0001 a0001c0003t0013 a0001c0010t0002 others(1): Show a0001c0002t0001 a0001c0003t0013 a0001c0010t0002 a0001c0012t0004	a0001c0002t0001g0007 a0001c0002t0001g0021 a0001c0003t0013g0010 others(2): Show a0001c0002t0001g0007 a0001c0002t0001g0021 a0001c0003t0013g0010 a0001c0010t0002g0014 a0001c0012t0004g0026	5	40	0.1250	-20	c.402 others(39): Show c.402+15930_402+15949delTATATATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146856261	TATAGATA others(13): Show TATAGATAGATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03139.hp1 NA20129.hp2 HG02976.hp1 HG03139.hp1 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0008 a0001c0015 a0001c0003 a0001c0008 a0001c0015	a0001c0003t0023 a0001c0008t0001 a0001c0015t0001 a0001c0003t0023 a0001c0008t0001 a0001c0015t0001	a0001c0003t0023g0030 a0001c0008t0001g0025 a0001c0015t0001g0011 a0001c0003t0023g0030 a0001c0008t0001g0025 a0001c0015t0001g0011	3	40	0.0750	-20	c.402 others(39): Show c.402+16377_402+16396delGATAGATAGATAGATAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146885928	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0017 a0002c0017	a0002c0017t0015 a0002c0017t0015	a0002c0017t0015g0037 a0002c0017t0015g0037	1	40	0.0250	-20	c.402 others(39): Show c.402+46051_402+46070delGTGTGTGTGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147033160	GTATATAT others(13): Show GTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02897.hp1 HG02922.hp2 others(4): Show HG02717.hp2 HG02897.hp1 HG02922.hp2 HG03139.hp1 HG03225.hp1 HG03239.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0008 a0001c0009	a0001c0001t0007 a0001c0002t0001 a0001c0002t0002 others(4): Show a0001c0001t0007 a0001c0002t0001 a0001c0002t0002 a0001c0004t0005 a0001c0005t0008 a0001c0008t0001 a0001c0009t0019	a0001c0001t0007g0018 a0001c0002t0001g0008 a0001c0002t0002g0040 others(4): Show a0001c0001t0007g0018 a0001c0002t0001g0008 a0001c0002t0002g0040 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0008t0001g0025 a0001c0009t0019g0027	7	40	0.1750	-20	c.403 others(39): Show c.403-10723_403-10704delATATATATATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147066248	GTCGTCAG others(13): Show GTCGTCAGTTCTAAGGTTATT	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02922.hp2 HG03139.hp1 HG02717.hp1 HG02922.hp2 HG03139.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0001c0008 a0002c0017 a0001c0004 a0001c0008 a0002c0017	a0001c0004t0005 a0001c0008t0001 a0002c0017t0015 a0001c0004t0005 a0001c0008t0001 a0002c0017t0015	a0001c0004t0005g0004 a0001c0008t0001g0025 a0002c0017t0015g0037 a0001c0004t0005g0004 a0001c0008t0001g0025 a0002c0017t0015g0037	3	40	0.0750	-20	c.550 others(39): Show c.550+22206_550+22225delAAGGTTATTTCGTCAGTTCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147902794	GTGTGTGT others(13): Show GTGTGTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0001 a0001c0015t0001	a0001c0015t0001g0011 a0001c0015t0001g0011	1	40	0.0250	-20	c.209 others(37): Show c.2099-751_2099-732delATGTGTGTGTGTGTGTGTGT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148061954	TATAGATA others(13): Show TATAGATAGATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02896.hp1 NA18522.hp2 others(2): Show HG02451.hp1 HG02896.hp1 NA18522.hp2 NA19030.hp1 NA19030.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0002c0016 others(1): Show a0001c0001 a0001c0002 a0002c0016 a0005c0020	a0001c0001t0001 a0001c0001t0007 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0002t0001 a0002c0016t0004 a0005c0020t0005	a0001c0001t0001g0038 a0001c0001t0007g0018 a0001c0002t0001g0007 others(2): Show a0001c0001t0001g0038 a0001c0001t0007g0018 a0001c0002t0001g0007 a0002c0016t0004g0024 a0005c0020t0005g0016	5	40	0.1250	-20	c.238 others(41): Show c.2384-56129_2384-56110delAGATAGATAGATAGATAGAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148123633	CAGGAAGG others(13): Show CAGGAAGGAAGGAAGGAAGGA	C C	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0002 a0001c0002t0010g0002	1	40	0.0250	-20	c.255 others(39): Show c.2554+5379_2554+5398delGGAAGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148137669	AAAGGAAG others(13): Show AAAGGAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	40	0.0250	-20	c.255 others(39): Show c.2555-9773_2555-9754delAAGGAAGGAAGGAAGGAAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23		INFO_REALIGN_3_PRIME	chr7	TogoVar

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