regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
STAT3_chr17_42308324_42393442 | 42338201 | GGACCTGA others(313): Show |
G | intron_variant | MODIFIER | HG01175.hp1 HG02257.hp1 HG02738.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0019others(2): Show | a0001c0001t0001g0152a0001c0001t0006g0214a0001c0001t0019g0230others(2): Show | 5 | 302 | 0.0166 | -320 | c.550 others(15): Show |
STAT3 | ENSG00000168610.17 | transcript | ENST00000264657.10 | protein_coding | 6/23 | chr17 | TogoVar | ||||||
STK39_chr2_167949022_168252595 | 168039296 | GAAAAAAG others(313): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00438.hp2 others(131): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0005others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(28): Show | a0001c0001t0001g0157a0001c0001t0001g0159a0001c0001t0001g0162others(131): Show | 134 | 270 | 0.4963 | -320 | c.137 others(21): Show |
STK39 | ENSG00000198648.12 | transcript | ENST00000355999.5 | protein_coding | 14/17 | chr2 | TogoVar | ||||||
THEG_chr19_356747_381026 | 361464 | GTTTGACT others(313): Show |
G | splice_region_variant | LOW | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(49): Show |
a0001a0002a0006others(3): Show | a0001c0001a0001c0003a0001c0009others(6): Show | a0001c0001t0003a0001c0001t0006a0001c0003t0003others(7): Show | a0001c0001t0003g0010a0001c0001t0003g0151a0001c0001t0003g0158others(46): Show | 52 | 370 | 0.1405 | -320 | c.*41 others(9): Show |
THEG | ENSG00000105549.11 | transcript | ENST00000342640.9 | protein_coding | 8/8 | chr19 | TogoVar | ||||||
TMEM170B_chr6_11532749_11588524 | 11555858 | TAAAGACT others(313): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(334): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(47): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0006others(205): Show | 337 | 352 | 0.9574 | -320 | c.98- others(15): Show |
TMEM170B | ENSG00000205269.6 | transcript | ENST00000379426.2 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
TMEM240_chr1_1529778_1545624 | 1530546 | ATGGCCGG others(313): Show |
A | downstream_gene_variant | MODIFIER | NA19075.hp1 | a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0074 | 1 | 428 | 0.0023 | -320 | c.*44 others(11): Show |
TMEM240 | ENSG00000205090.10 | transcript | ENST00000378733.9 | protein_coding | 4231 | chr1 | TogoVar | ||||||
TMEM63C_chr14_77176798_77264495 | 77220905 | GCCTCCCA others(313): Show |
G | intron_variant | MODIFIER | HG01175.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0210 | 1 | 322 | 0.0031 | -320 | c.312 others(16): Show |
TMEM63C | ENSG00000165548.11 | transcript | ENST00000298351.5 | protein_coding | 5/23 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
TPD52L2_chr20_63860270_63896538 | 63879560 | TTTCCCCA others(313): Show |
T | intron_variant | MODIFIER | HG04184.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0235 | 1 | 368 | 0.0027 | -320 | c.375 others(17): Show |
TPD52L2 | ENSG00000101150.18 | transcript | ENST00000346249.9 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TUBGCP2_chr10_133273635_133313872 | 133291236 | GCCCTCCG others(313): Show |
G | intron_variant | MODIFIER | HG02965.hp2 | a0005 | a0005c0013 | a0005c0013t0001 | a0005c0013t0001g0031 | 1 | 284 | 0.0035 | -320 | c.121 others(18): Show |
TUBGCP2 | ENSG00000130640.15 | transcript | ENST00000252936.8 | protein_coding | 8/17 | chr10 | TogoVar | ||||||
UGT2A3_chr4_68923463_68956804 | 68925137 | CAAAAGAT others(313): Show |
C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(286): Show |
a0001a0003a0004others(3): Show | a0001c0002a0001c0003a0001c0010others(6): Show | a0001c0002t0003a0001c0002t0004a0001c0002t0014others(15): Show | a0001c0002t0003g0009a0001c0002t0003g0018a0001c0002t0003g0019others(208): Show | 289 | 459 | 0.6296 | -320 | c.*43 others(11): Show |
UGT2A3 | ENSG00000135220.11 | transcript | ENST00000251566.9 | protein_coding | 3325 | chr4 | TogoVar | ||||||
YTHDC2_chr5_113508694_113600284 | 113545719 | TTGATCTC others(313): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00408.hp1 others(148): Show |
a0001a0002a0003others(8): Show | a0001c0017a0002c0002a0002c0006others(16): Show | a0001c0017t0001a0002c0002t0003a0002c0002t0004others(23): Show | a0001c0017t0001g0155a0002c0002t0003g0009a0002c0002t0003g0204others(142): Show | 151 | 316 | 0.4779 | -320 | c.149 others(19): Show |
YTHDC2 | ENSG00000047188.16 | transcript | ENST00000161863.9 | protein_coding | 10/29 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
ZFPM2_chr8_105313438_105809539 | 105658290 | TAGAAATC others(313): Show |
T | intron_variant | MODIFIER | HG00558.hp2 HG00735.hp2 HG00738.hp2 others(43): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0016a0002c0002others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(14): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(43): Show | 46 | 92 | 0.5000 | -320 | c.532 others(19): Show |
ZFPM2 | ENSG00000169946.14 | transcript | ENST00000407775.7 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
ZNF835_chr19_56656980_56676757 | 56669497 | AGGGGCCT others(313): Show |
A | intron_variant | MODIFIER | HG00621.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0128 | 1 | 450 | 0.0022 | -320 | c.-48 others(17): Show |
ZNF835 | ENSG00000127903.14 | transcript | ENST00000537055.4 | protein_coding | 1/1 | chr19 | TogoVar | ||||||
ZNF835_chr19_56656980_56676757 | 56669706 | TCAGGAGT others(313): Show |
T | intron_variant | MODIFIER | HG02258.hp1 HG02572.hp1 NA21309.hp1 |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0004a0003c0003t0004 | a0001c0001t0004g0099a0003c0003t0004g0037 | 3 | 450 | 0.0067 | -320 | c.-48 others(17): Show |
ZNF835 | ENSG00000127903.14 | transcript | ENST00000537055.4 | protein_coding | 1/1 | chr19 | TogoVar | ||||||
ADCY10_chr1_167804386_167919134 | 167897705 | TATCAACA others(312): Show |
T | intron_variant | MODIFIER | HG02647.hp2 HG02723.hp2 HG02895.hp1 others(7): Show |
a0002a0003a0004 | a0002c0001a0003c0009a0004c0011others(1): Show | a0002c0001t0001a0002c0001t0003a0003c0009t0003others(3): Show | a0002c0001t0001g0298a0002c0001t0003g0012a0003c0009t0003g0297others(7): Show | 10 | 326 | 0.0307 | -319 | c.643 others(17): Show |
ADCY10 | ENSG00000143199.18 | transcript | ENST00000367851.9 | protein_coding | 6/32 | chr1 | TogoVar | ||||||
ADGRD1_chr12_130948907_131146469 | 131037345 | CCTCACTC others(312): Show |
C | intron_variant | MODIFIER | HG01516.hp1 HG02280.hp2 HG02572.hp1 others(1): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0028a0001c0003t0029a0001c0004t0015others(1): Show | a0001c0001t0028g0205a0001c0003t0029g0214a0001c0004t0015g0093others(1): Show | 4 | 242 | 0.0165 | -319 | c.147 others(21): Show |
ADGRD1 | ENSG00000111452.13 | transcript | ENST00000261654.10 | protein_coding | 13/24 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
AP3D1_chr19_2095988_2156566 | 2128704 | GCCCCCGC others(312): Show |
G | intron_variant | MODIFIER | NA18966.hp2 NA18970.hp2 NA18977.hp2 others(1): Show |
a0001a0002 | a0001c0004a0001c0020a0002c0009 | a0001c0004t0002a0001c0020t0002a0002c0009t0002 | a0001c0004t0002g0240a0001c0004t0002g0248a0001c0020t0002g0232others(1): Show | 4 | 406 | 0.0099 | -319 | c.806 others(14): Show |
AP3D1 | ENSG00000065000.20 | transcript | ENST00000643116.3 | protein_coding | 8/31 | chr19 | TogoVar | ||||||
ARSB_chr5_78772209_78990310 | 78981903 | TAGATATG others(312): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(172): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0005others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(85): Show | a0001c0001t0001g0134a0001c0001t0001g0135a0001c0001t0001g0144others(171): Show | 175 | 360 | 0.4861 | -319 | c.312 others(17): Show |
ARSB | ENSG00000113273.17 | transcript | ENST00000264914.10 | protein_coding | 1/7 | chr5 | TogoVar | ||||||
ATAD3A_chr1_1507162_1539685 | 1530531 | TAAAAACT others(312): Show |
T | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00438.hp1 others(142): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0003a0001c0004others(15): Show | a0001c0001t0001a0001c0003t0001a0001c0004t0001others(18): Show | a0001c0001t0001g0152a0001c0001t0001g0157a0001c0001t0001g0158others(130): Show | 145 | 420 | 0.3452 | -319 | c.161 others(19): Show |
ATAD3A | ENSG00000197785.14 | transcript | ENST00000378756.8 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
ATP11A_chr13_112685038_112892168 | 112766866 | AGGGTGTG others(312): Show |
A | intron_variant | MODIFIER | HG02132.hp2 | a0003 | a0003c0047 | a0003c0047t0001 | a0003c0047t0001g0038 | 1 | 254 | 0.0039 | -319 | c.40- others(17): Show |
ATP11A | ENSG00000068650.19 | transcript | ENST00000375645.8 | protein_coding | 1/29 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
ATRNL1_chr10_115088365_115953999 | 115246540 | AATCTCTC others(312): Show |
A | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp2 HG00738.hp2 others(55): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(38): Show | a0001c0001t0001g0120a0001c0001t0002g0015a0001c0001t0002g0077others(55): Show | 58 | 128 | 0.4531 | -319 | c.168 others(19): Show |
ATRNL1 | ENSG00000107518.18 | transcript | ENST00000355044.8 | protein_coding | 10/28 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
BRSK2_chr11_1384934_1467689 | 1435232 | AGCGGAGG others(312): Show |
A | intron_variant | MODIFIER | HG01346.hp2 HG02717.hp1 |
a0002 | a0002c0005 | a0002c0005t0034 | a0002c0005t0034g0055a0002c0005t0034g0056 | 2 | 360 | 0.0056 | -319 | c.92- others(13): Show |
BRSK2 | ENSG00000174672.16 | transcript | ENST00000528841.6 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
C2CD4C_chr19_400445_414147 | 404481 | GGGGCACG others(312): Show |
G | downstream_gene_variant | MODIFIER | HG02080.hp2 NA19085.hp1 |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0060 | a0001c0002t0003g0002a0001c0002t0060g0124 | 2 | 322 | 0.0062 | -319 | c.*22 others(11): Show |
C2CD4C | ENSG00000183186.8 | transcript | ENST00000332235.8 | protein_coding | 963 | chr19 | TogoVar | ||||||
CACNA2D3_chr3_54117552_55079557 | 54809298 | TCCTTCCT others(312): Show |
T | intron_variant | MODIFIER | HG02109.hp2 HG02258.hp2 HG02280.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0007t0001others(1): Show | a0001c0001t0001g0024a0001c0001t0001g0035a0001c0001t0001g0045others(5): Show | 8 | 118 | 0.0678 | -319 | c.138 others(19): Show |
CACNA2D3 | ENSG00000157445.16 | transcript | ENST00000474759.6 | protein_coding | 13/37 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CACNG7_chr19_53904278_53948950 | 53919937 | TATTGGTG others(312): Show |
T | intron_variant | MODIFIER | HG03209.hp1 HG06807.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0021a0001c0001t0001g0355 | 2 | 364 | 0.0055 | -319 | c.424 others(17): Show |
CACNG7 | ENSG00000105605.8 | transcript | ENST00000391767.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CCSER1_chr4_90122394_91610295 | 90461048 | AGGCTATT others(312): Show |
A | intron_variant | MODIFIER | HG01192.hp1 HG01884.hp1 HG01884.hp2 others(10): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0008others(4): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(10): Show | a0001c0001t0003g0034a0001c0001t0004g0022a0001c0001t0005g0017others(10): Show | 13 | 38 | 0.3421 | -319 | c.160 others(19): Show |
CCSER1 | ENSG00000184305.16 | transcript | ENST00000509176.6 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
CKAP2_chr13_52450478_52481627 | 52469567 | ATGAAATA others(312): Show |
A | intron_variant | MODIFIER | HG02970.hp2 HG06807.hp1 NA18522.hp2 others(1): Show |
a0001 | a0001c0001a0001c0013 | a0001c0001t0005a0001c0013t0008 | a0001c0001t0005g0035a0001c0001t0005g0154a0001c0013t0008g0155 | 4 | 406 | 0.0099 | -319 | c.154 others(19): Show |
CKAP2 | ENSG00000136108.15 | transcript | ENST00000258607.10 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
CLPTM1L_chr5_1312752_1350099 | 1327465 | TCCAGCTC others(312): Show |
T | intron_variant | MODIFIER | HG01099.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0346 | 1 | 370 | 0.0027 | -319 | c.108 others(19): Show |
CLPTM1L | ENSG00000049656.14 | transcript | ENST00000320895.10 | protein_coding | 9/16 | chr5 | TogoVar | ||||||
CLPTM1L_chr5_1312752_1350099 | 1328386 | GACATTTC others(312): Show |
G | intron_variant | MODIFIER | HG02922.hp2 NA19240.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0316a0001c0001t0001g0317 | 2 | 370 | 0.0054 | -319 | c.108 others(19): Show |
CLPTM1L | ENSG00000049656.14 | transcript | ENST00000320895.10 | protein_coding | 9/16 | chr5 | TogoVar | ||||||
CNTLN_chr9_17130040_17508923 | 17178946 | CAGAAGTG others(312): Show |
C | intron_variant | MODIFIER | HG01109.hp1 HG02109.hp1 HG02258.hp1 |
a0001a0013 | a0001c0055a0013c0019 | a0001c0055t0001a0013c0019t0002 | a0001c0055t0001g0021a0013c0019t0002g0119a0013c0019t0002g0120 | 3 | 218 | 0.0138 | -319 | c.449 others(19): Show |
CNTLN | ENSG00000044459.15 | transcript | ENST00000380647.8 | protein_coding | 2/25 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COX7A2_chr6_75232787_75248801 | 75248067 | TCCACATC others(312): Show |
T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(351): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(46): Show | 354 | 382 | 0.9267 | -319 | c.-46 others(11): Show |
COX7A2 | ENSG00000112695.13 | transcript | ENST00000684430.2 | protein_coding | 4267 | chr6 | TogoVar | ||||||
CRYBG1_chr6_106355717_106577017 | 106535747 | AAGCCACT others(312): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00408.hp2 others(250): Show |
a0001a0002a0003others(61): Show | a0001c0001a0001c0009a0001c0022others(72): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(96): Show | a0001c0001t0001g0001a0001c0001t0001g0012a0001c0001t0001g0016others(250): Show | 253 | 272 | 0.9302 | -319 | c.471 others(19): Show |
CRYBG1 | ENSG00000112297.18 | transcript | ENST00000633556.3 | protein_coding | 8/21 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
DISP1_chr1_222810039_223010995 | 222887478 | TTGTTTTT others(312): Show |
T | intron_variant | MODIFIER | HG00621.hp1 HG00741.hp2 HG01106.hp2 others(23): Show |
a0001a0004a0005others(3): Show | a0001c0001a0001c0002a0001c0005others(7): Show | a0001c0001t0001a0001c0002t0001a0001c0005t0001others(7): Show | a0001c0001t0001g0064a0001c0001t0001g0065a0001c0001t0001g0066others(23): Show | 26 | 348 | 0.0747 | -319 | c.-15 others(21): Show |
DISP1 | ENSG00000154309.9 | transcript | ENST00000675850.1 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
DLGAP2_chr8_732628_1713476 | 1013799 | CTGCGTGT others(312): Show |
C | intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0003 | a0001c0003t0024 | a0001c0003t0024g0003 | 1 | 40 | 0.0250 | -319 | c.73+ others(19): Show |
DLGAP2 | ENSG00000198010.13 | transcript | ENST00000637795.2 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
DSE_chr6_116365947_116449861 | 116429650 | TAGAAATA others(312): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(229): Show |
a0001a0002a0004others(6): Show | a0001c0001a0002c0002a0004c0005others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(35): Show | a0001c0001t0001g0009a0001c0001t0001g0011a0001c0001t0001g0028others(214): Show | 232 | 366 | 0.6339 | -319 | c.671 others(16): Show |
DSE | ENSG00000111817.19 | transcript | ENST00000644252.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
ENAH_chr1_225481829_225658123 | 225574612 | AAAAAAAA others(312): Show |
A | intron_variant | MODIFIER | HG01074.hp2 HG01255.hp1 HG01358.hp2 others(27): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0003a0001c0001t0005a0001c0001t0037others(9): Show | a0001c0001t0003g0010a0001c0001t0003g0011a0001c0001t0003g0069others(27): Show | 30 | 308 | 0.0974 | -319 | c.6-7 others(13): Show |
ENAH | ENSG00000154380.19 | transcript | ENST00000366843.7 | protein_coding | 1/13 | chr1 | TogoVar | ||||||
FAM168B_chr2_131042876_131098460 | 131086781 | AAAGGCCG others(312): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00544.hp2 others(69): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(11): Show | a0001c0001t0002g0003a0001c0001t0002g0005a0001c0001t0002g0019others(52): Show | 72 | 260 | 0.2769 | -319 | c.-11 others(17): Show |
FAM168B | ENSG00000152102.18 | transcript | ENST00000389915.4 | protein_coding | 1/6 | chr2 | TogoVar | ||||||
FAM83G_chr17_18963789_19009764 | 19006218 | TAGATTTC others(312): Show |
T | upstream_gene_variant | MODIFIER | HG04199.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0086 | 1 | 378 | 0.0027 | -319 | c.-19 others(11): Show |
FAM83G | ENSG00000188522.16 | transcript | ENST00000388995.11 | protein_coding | 1455 | chr17 | TogoVar | ||||||
FRMD4A_chr10_13638706_14335924 | 14014954 | CCTTCCTT others(312): Show |
C | intron_variant | MODIFIER | HG02559.hp2 HG03041.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0017 | a0001c0001t0003g0079a0001c0002t0017g0131 | 2 | 134 | 0.0149 | -319 | c.46- others(19): Show |
FRMD4A | ENSG00000151474.23 | transcript | ENST00000357447.7 | protein_coding | 2/24 | chr10 | TogoVar | ||||||
FSTL5_chr4_161378897_162169000 | 162141093 | CCCTCCCT others(312): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00621.hp1 others(32): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(14): Show | a0001c0001t0001g0086a0001c0001t0001g0090a0001c0001t0001g0091others(32): Show | 35 | 142 | 0.2465 | -319 | c.-17 others(19): Show |
FSTL5 | ENSG00000168843.14 | transcript | ENST00000306100.10 | protein_coding | 1/15 | chr4 | TogoVar | ||||||
GAL3ST2_chr2_241771822_241809287 | 241807331 | ACCTTCCC others(312): Show |
A | downstream_gene_variant | MODIFIER | NA18969.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0016 | 1 | 314 | 0.0032 | -319 | c.*31 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 3045 | chr2 | TogoVar | ||||||
GPC5_chr13_91393621_92872237 | 92352965 | TGAAATGT others(312): Show |
T | intron_variant | MODIFIER | HG06807.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0042 | 1 | 42 | 0.0238 | -319 | c.156 others(23): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GRIA4_chr11_105605073_105987090 | 105894779 | TTATTGCT others(312): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00609.hp1 others(40): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0002c0005others(1): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0010others(17): Show | a0001c0001t0004g0038a0001c0001t0004g0040a0001c0001t0004g0073others(40): Show | 43 | 184 | 0.2337 | -319 | c.727 others(17): Show |
GRIA4 | ENSG00000152578.15 | transcript | ENST00000282499.10 | protein_coding | 6/16 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
GRTP1_chr13_113319163_113369130 | 113330080 | CGTGCATG others(312): Show |
C | intron_variant | MODIFIER | HG02647.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0159 | 1 | 288 | 0.0035 | -319 | c.563 others(17): Show |
GRTP1 | ENSG00000139835.14 | transcript | ENST00000375431.9 | protein_coding | 5/7 | chr13 | TogoVar | ||||||
GSTT2B_chr22_23952414_23966195 | 23961682 | TAGAGTTT others(312): Show |
T | upstream_gene_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0038 | 1 | 119 | 0.0084 | -319 | c.-87 others(9): Show |
GSTT2B | ENSG00000133433.11 | transcript | ENST00000290765.9 | protein_coding | 488 | chr22 | TogoVar | ||||||
GUCA2A_chr1_42157690_42169745 | 42166805 | GTGTGTGT others(312): Show |
G | upstream_gene_variant | MODIFIER | HG00544.hp1 HG00597.hp1 HG00597.hp2 others(102): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0004a0002c0002t0001 | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0005others(6): Show | 105 | 436 | 0.2408 | -319 | c.-24 others(11): Show |
GUCA2A | ENSG00000197273.4 | transcript | ENST00000357001.3 | protein_coding | 2061 | chr1 | TogoVar | ||||||
HLA-DRB1_chr6_32573775_32594848 | 32579821 | AGGCCGGG others(312): Show |
A | intron_variant | MODIFIER | HG01257.hp2 HG01258.hp2 HG02895.hp2 others(2): Show |
a0013 | a0013c0014 | a0013c0014t0013 | a0013c0014t0013g0011 | 5 | 208 | 0.0240 | -319 | c.787 others(15): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 5/5 | chr6 | TogoVar | ||||||
HLA-DRB1_chr6_32573775_32594848 | 32579825 | CGGGCGCG others(312): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(128): Show |
a0002a0003a0005others(20): Show | a0002c0003a0003c0002a0005c0008others(21): Show | a0002c0003t0002a0003c0002t0005a0005c0008t0006others(22): Show | a0002c0003t0002g0008a0002c0003t0002g0020a0002c0003t0002g0021others(76): Show | 131 | 208 | 0.6298 | -319 | c.787 others(15): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 5/5 | chr6 | TogoVar | ||||||
ITGB5_chr3_124756948_124892365 | 124789758 | TCAGAACC others(312): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG00735.hp1 HG01074.hp1 others(6): Show |
a0001a0004 | a0001c0001a0004c0005a0004c0017 | a0001c0001t0002a0004c0005t0008a0004c0017t0008 | a0001c0001t0002g0070a0001c0001t0002g0241a0004c0005t0008g0303others(6): Show | 9 | 352 | 0.0256 | -319 | c.169 others(19): Show |
ITGB5 | ENSG00000082781.12 | transcript | ENST00000296181.9 | protein_coding | 10/14 | chr3 | TogoVar | ||||||
ITGB5_chr3_124756948_124892365 | 124789932 | TCAGAACC others(312): Show |
T | intron_variant | MODIFIER | NA18946.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0197 | 1 | 352 | 0.0028 | -319 | c.169 others(19): Show |
ITGB5 | ENSG00000082781.12 | transcript | ENST00000296181.9 | protein_coding | 10/14 | chr3 | TogoVar | ||||||
KCNMA1_chr10_76879882_77642808 | 77041144 | GCTAATTC others(312): Show |
G | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00597.hp1 others(94): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(32): Show | a0001c0001t0001g0022a0001c0001t0001g0023a0001c0001t0001g0027others(94): Show | 97 | 106 | 0.9151 | -319 | c.175 others(19): Show |
KCNMA1 | ENSG00000156113.25 | transcript | ENST00000286628.14 | protein_coding | 14/27 | chr10 | TogoVar |