regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EIF2B3_chr1_44845522_44991595 | 44951950 | GCTAATTT others(305): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00544.hp1 HG00735.hp1 others(74): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0127a0001c0001t0001g0128a0001c0001t0001g0129others(74): Show | 77 | 322 | 0.2391 | -312 | c.295 others(19): Show |
EIF2B3 | ENSG00000070785.17 | transcript | ENST00000360403.7 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
ERICH1_chr8_659200_736224 | 695857 | GCTCGCTC others(305): Show |
G | intron_variant | MODIFIER | NA18962.hp2 NA18970.hp1 NA18983.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0168a0001c0001t0001g0200a0001c0001t0001g0201 | 3 | 378 | 0.0079 | -312 | c.170 others(17): Show |
ERICH1 | ENSG00000104714.14 | transcript | ENST00000262109.8 | protein_coding | 2/5 | chr8 | TogoVar | ||||||
FOXN3_chr14_89151177_89422233 | 89362301 | CACCACCA others(305): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01975.hp2 HG02273.hp1 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0004a0001c0001t0019a0001c0001t0040others(2): Show | a0001c0001t0004g0127a0001c0001t0019g0004a0001c0001t0040g0184others(2): Show | 5 | 230 | 0.0217 | -312 | c.544 others(19): Show |
FOXN3 | ENSG00000053254.16 | transcript | ENST00000557258.6 | protein_coding | 2/5 | chr14 | TogoVar | ||||||
GAL3ST2_chr2_241771822_241809287 | 241807100 | CTCCCTCC others(305): Show |
C | downstream_gene_variant | MODIFIER | HG02056.hp2 HG02572.hp2 |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0002a0003c0003t0001 | a0001c0001t0002g0066a0003c0003t0001g0249 | 2 | 314 | 0.0064 | -312 | c.*29 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2814 | chr2 | TogoVar | ||||||
GGCT_chr7_30491621_30509829 | 30495984 | TTTTTTTT others(305): Show |
T | downstream_gene_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0033 | 1 | 444 | 0.0023 | -312 | c.*79 others(10): Show |
GGCT | ENSG00000006625.18 | transcript | ENST00000275428.9 | protein_coding | 636 | chr7 | TogoVar | ||||||
GNAL_chr18_11684264_11890685 | 11880054 | CAAGACCA others(305): Show |
C | intron_variant | MODIFIER | HG01074.hp2 HG02004.hp2 HG02083.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0023a0001c0001t0024a0001c0001t0025others(5): Show | a0001c0001t0023g0104a0001c0001t0023g0203a0001c0001t0024g0192others(8): Show | 11 | 248 | 0.0444 | -312 | c.123 others(17): Show |
GNAL | ENSG00000141404.17 | transcript | ENST00000334049.11 | protein_coding | 11/11 | chr18 | TogoVar | ||||||
GNAL_chr18_11747085_11890685 | 11880054 | CAAGACCA others(305): Show |
C | intron_variant | MODIFIER | HG00609.hp2 HG01074.hp1 HG02004.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0016a0001c0001t0017a0001c0001t0038others(8): Show | a0001c0001t0016g0001a0001c0001t0016g0011a0001c0001t0016g0164others(15): Show | 18 | 284 | 0.0634 | -312 | c.100 others(17): Show |
GNAL | ENSG00000141404.17 | transcript | ENST00000423027.8 | protein_coding | 11/11 | chr18 | TogoVar | ||||||
GON4L_chr1_155744659_155862214 | 155748960 | TTAAGTTT others(305): Show |
T | downstream_gene_variant | MODIFIER | HG03654.hp1 | a0002 | a0002c0002 | a0002c0002t0010 | a0002c0002t0010g0141 | 1 | 218 | 0.0046 | -312 | c.*13 others(11): Show |
GON4L | ENSG00000116580.20 | transcript | ENST00000368331.6 | protein_coding | 698 | chr1 | TogoVar | ||||||
HACE1_chr6_104723094_104864919 | 104774081 | TTTTTTTT others(305): Show |
T | intron_variant | MODIFIER | HG02257.hp2 HG02559.hp1 HG02615.hp1 others(7): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0076a0001c0002t0001g0077a0001c0002t0001g0078others(7): Show | 10 | 346 | 0.0289 | -312 | c.186 others(19): Show |
HACE1 | ENSG00000085382.12 | transcript | ENST00000262903.9 | protein_coding | 17/23 | chr6 | TogoVar | ||||||
IKBKB_chr8_42266302_42337460 | 42327797 | TAATTTTG others(305): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(151): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(10): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(147): Show | 154 | 278 | 0.5540 | -312 | c.211 others(19): Show |
IKBKB | ENSG00000104365.16 | transcript | ENST00000520810.6 | protein_coding | 20/21 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
IPP_chr1_45693711_45755653 | 45741614 | TCTTATTT others(305): Show |
T | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00544.hp1 others(47): Show |
a0002a0003 | a0002c0002a0002c0004a0003c0003 | a0002c0002t0001a0002c0002t0007a0002c0002t0009others(2): Show | a0002c0002t0001g0082a0002c0002t0001g0083a0002c0002t0001g0084others(47): Show | 50 | 128 | 0.3906 | -312 | c.293 others(15): Show |
IPP | ENSG00000197429.11 | transcript | ENST00000396478.4 | protein_coding | 2/8 | chr1 | TogoVar | ||||||
LGR5_chr12_71434798_71591310 | 71563936 | ACACCGTG others(305): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00423.hp2 others(41): Show |
a0001a0005a0007 | a0001c0001a0005c0007a0007c0010 | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(4): Show | a0001c0001t0003g0025a0001c0001t0003g0026a0001c0001t0003g0061others(41): Show | 44 | 200 | 0.2200 | -312 | c.857 others(17): Show |
LGR5 | ENSG00000139292.13 | transcript | ENST00000266674.10 | protein_coding | 8/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LMLN_chr3_197955217_198048720 | 198004562 | CATCTATA others(305): Show |
C | intron_variant | MODIFIER | NA18945.hp2 NA18966.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0015 | a0001c0001t0001g0154a0001c0001t0015g0149 | 2 | 258 | 0.0078 | -312 | c.131 others(19): Show |
LMLN | ENSG00000185621.11 | transcript | ENST00000420910.7 | protein_coding | 12/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LMLN_chr3_197955217_198048720 | 198004713 | ACATCTAT others(305): Show |
A | intron_variant | MODIFIER | HG00609.hp1 HG00639.hp2 HG00738.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0033others(1): Show | a0001c0001t0001g0083a0001c0001t0001g0137a0001c0001t0001g0150others(18): Show | 21 | 258 | 0.0814 | -312 | c.131 others(19): Show |
LMLN | ENSG00000185621.11 | transcript | ENST00000420910.7 | protein_coding | 12/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
MAML1_chr5_179727822_179782283 | 179780889 | GAATCTTC others(305): Show |
G | downstream_gene_variant | MODIFIER | HG02523.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0095 | 1 | 360 | 0.0028 | -312 | c.*60 others(11): Show |
MAML1 | ENSG00000161021.13 | transcript | ENST00000292599.4 | protein_coding | 3607 | chr5 | TogoVar | ||||||
MDGA2_chr14_46835092_47680605 | 46964910 | ATATATTT others(305): Show |
A | intron_variant | MODIFIER | HG01192.hp1 HG01496.hp2 HG01891.hp1 others(16): Show |
a0002a0006 | a0002c0002a0002c0006a0002c0010others(1): Show | a0002c0002t0001a0002c0002t0004a0002c0002t0005others(7): Show | a0002c0002t0001g0053a0002c0002t0001g0081a0002c0002t0001g0114others(16): Show | 19 | 120 | 0.1583 | -312 | c.182 others(19): Show |
MDGA2 | ENSG00000139915.22 | transcript | ENST00000399232.8 | protein_coding | 8/16 | chr14 | TogoVar | ||||||
MGRN1_chr16_4619826_4695972 | 4622100 | TCTCAGCC others(305): Show |
T | upstream_gene_variant | MODIFIER | HG01175.hp2 HG01243.hp1 HG02055.hp1 others(25): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(11): Show | a0001c0001t0003g0009a0001c0001t0003g0013a0001c0001t0003g0097others(25): Show | 28 | 334 | 0.0838 | -312 | c.-28 others(11): Show |
MGRN1 | ENSG00000102858.13 | transcript | ENST00000262370.12 | protein_coding | 2725 | chr16 | TogoVar | ||||||
MPPE1_chr18_11877622_11913317 | 11880054 | CAAGACCA others(305): Show |
C | downstream_gene_variant | MODIFIER | HG00609.hp2 HG01074.hp2 HG01361.hp1 others(26): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0010a0001c0001t0020a0001c0001t0029others(11): Show | a0001c0001t0010g0273a0001c0001t0010g0312a0001c0001t0010g0352others(26): Show | 29 | 456 | 0.0636 | -312 | c.*40 others(11): Show |
MPPE1 | ENSG00000154889.17 | transcript | ENST00000588072.6 | protein_coding | 2567 | chr18 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241807100 | CTCCCTCC others(305): Show |
C | upstream_gene_variant | MODIFIER | HG02056.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0011 | 1 | 319 | 0.0031 | -312 | c.-21 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2092 | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241807615 | TCCCCCCT others(305): Show |
T | upstream_gene_variant | MODIFIER | HG02818.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0116 | 1 | 319 | 0.0031 | -312 | c.-16 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 1577 | chr2 | TogoVar | ||||||
NOTO_chr2_73197574_73217513 | 73203803 | TAAAAGAC others(305): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00609.hp1 others(80): Show |
a0001a0003a0006 | a0001c0001a0001c0003a0003c0004others(1): Show | a0001c0001t0003a0001c0001t0006a0001c0001t0007others(7): Show | a0001c0001t0003g0003a0001c0001t0003g0016a0001c0001t0003g0037others(32): Show | 83 | 380 | 0.2184 | -312 | c.382 others(16): Show |
NOTO | ENSG00000214513.4 | transcript | ENST00000398468.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
NRXN3_chr14_78165373_79873291 | 78879949 | TAAGAATT others(305): Show |
T | intron_variant | MODIFIER | HG03453.hp1 HG03516.hp2 |
a0001 | a0001c0002a0001c0010 | a0001c0002t0011a0001c0010t0001 | a0001c0002t0011g0016a0001c0010t0001g0012 | 2 | 24 | 0.0833 | -312 | c.227 others(21): Show |
NRXN3 | ENSG00000021645.20 | transcript | ENST00000335750.7 | protein_coding | 10/20 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
NTM_chr11_131365615_132341822 | 132069174 | CGTCACAC others(305): Show |
C | intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0043 | 1 | 86 | 0.0116 | -312 | c.168 others(19): Show |
NTM | ENSG00000182667.15 | transcript | ENST00000683400.1 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
OPRL1_chr20_64075082_64105633 | 64090734 | CCACTGAT others(305): Show |
C | intron_variant | MODIFIER | HG00741.hp2 HG01074.hp1 HG01106.hp1 others(29): Show |
a0001a0003 | a0001c0001a0001c0005a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0022others(25): Show | 32 | 66 | 0.4849 | -312 | c.-18 others(18): Show |
OPRL1 | ENSG00000125510.18 | transcript | ENST00000336866.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
P4HA1_chr10_73002217_73101866 | 73038613 | TTTTATTT others(305): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG00423.hp1 HG00438.hp2 others(91): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0005a0001c0001t0008others(4): Show | a0001c0001t0002g0001a0001c0001t0002g0002a0001c0001t0002g0003others(91): Show | 94 | 234 | 0.4017 | -312 | c.114 others(19): Show |
P4HA1 | ENSG00000122884.13 | transcript | ENST00000394890.7 | protein_coding | 9/14 | chr10 | TogoVar | ||||||
PADI6_chr1_17367196_17406699 | 17379101 | TGCCCAGT others(305): Show |
T | intron_variant | MODIFIER | HG01099.hp1 HG01106.hp1 HG01167.hp2 others(8): Show |
a0001a0002a0005 | a0001c0001a0002c0005a0005c0009 | a0001c0001t0002a0002c0005t0002a0002c0005t0009others(1): Show | a0001c0001t0002g0015a0001c0001t0002g0055a0001c0001t0002g0056others(7): Show | 11 | 412 | 0.0267 | -312 | c.368 others(15): Show |
PADI6 | ENSG00000276747.1 | transcript | ENST00000619609.1 | protein_coding | 3/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PAK5_chr20_9532370_9844076 | 9569689 | GAAGGTAG others(305): Show |
G | intron_variant | MODIFIER | NA18906.hp2 | a0001 | a0001c0002 | a0001c0002t0022 | a0001c0002t0022g0109 | 1 | 208 | 0.0048 | -312 | c.991 others(17): Show |
PAK5 | ENSG00000101349.17 | transcript | ENST00000353224.10 | protein_coding | 4/9 | chr20 | TogoVar | ||||||
PCSK5_chr9_75885673_76367975 | 76121810 | ATTGGTTT others(305): Show |
A | intron_variant | MODIFIER | HG00544.hp1 HG00544.hp2 HG00639.hp1 others(68): Show |
a0001a0002a0003others(30): Show | a0001c0001a0001c0004a0001c0013others(47): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(63): Show | a0001c0001t0002g0097a0001c0001t0002g0112a0001c0001t0003g0155others(68): Show | 71 | 166 | 0.4277 | -312 | c.120 others(21): Show |
PCSK5 | ENSG00000099139.14 | transcript | ENST00000674117.1 | protein_coding | 9/37 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
PLSCR4_chr3_146187335_146256105 | 146214111 | ATCTTCCT others(305): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00423.hp1 others(265): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0007a0002c0002others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(53): Show | a0001c0001t0001g0007a0001c0001t0001g0010a0001c0001t0001g0011others(220): Show | 268 | 380 | 0.7053 | -312 | c.118 others(17): Show |
PLSCR4 | ENSG00000114698.15 | transcript | ENST00000354952.7 | protein_coding | 3/8 | chr3 | TogoVar | ||||||
POLE_chr12_132618762_132692342 | 132688318 | ACGGGTGA others(305): Show |
A | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00438.hp2 HG00642.hp1 others(86): Show |
a0001a0005a0009others(4): Show | a0001c0002a0001c0005a0001c0033others(7): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0009others(11): Show | a0001c0002t0001g0193a0001c0002t0002g0002a0001c0002t0002g0004others(80): Show | 89 | 292 | 0.3048 | -312 | c.-13 others(11): Show |
POLE | ENSG00000177084.19 | transcript | ENST00000320574.10 | protein_coding | 977 | chr12 | TogoVar | ||||||
PRDM16_chr1_3064203_3443621 | 3165500 | GACAGGGA others(305): Show |
G | intron_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0175 | 1 | 210 | 0.0048 | -312 | c.38- others(17): Show |
PRDM16 | ENSG00000142611.17 | transcript | ENST00000270722.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PRIM2_chr6_57312630_57651850 | 57598932 | ACTGAGCT others(305): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(222): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0002a0001c0001t0001g0040a0001c0001t0001g0041others(222): Show | 225 | 300 | 0.7500 | -312 | c.102 others(19): Show |
PRIM2 | ENSG00000146143.19 | transcript | ENST00000615550.5 | protein_coding | 10/13 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
PRSS38_chr1_227810675_227851470 | 227836392 | TAATAAAA others(305): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(335): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0005a0001c0007others(24): Show | a0001c0001t0001a0001c0001t0002a0001c0005t0002others(26): Show | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(201): Show | 338 | 450 | 0.7511 | -312 | c.584 others(17): Show |
PRSS38 | ENSG00000185888.6 | transcript | ENST00000366757.4 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PTBP2_chr1_96716784_96820049 | 96762265 | GTGGCCGG others(305): Show |
G | intron_variant | MODIFIER | HG03209.hp2 NA19240.hp1 |
a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0002 | 2 | 364 | 0.0055 | -312 | c.116 others(17): Show |
PTBP2 | ENSG00000117569.20 | transcript | ENST00000674951.1 | protein_coding | 3/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PXMP2_chr12_132682587_132709985 | 132688318 | ACGGGTGA others(305): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp1 HG00642.hp1 others(92): Show |
a0001a0003a0004 | a0001c0002a0001c0005a0003c0009others(1): Show | a0001c0002t0002a0001c0002t0006a0001c0005t0005others(2): Show | a0001c0002t0002g0002a0001c0002t0002g0004a0001c0002t0002g0006others(39): Show | 95 | 350 | 0.2714 | -312 | c.122 others(15): Show |
PXMP2 | ENSG00000176894.10 | transcript | ENST00000317479.8 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PXMP2_chr12_132682587_132709985 | 132688903 | ACGGGTGA others(305): Show |
A | intron_variant | MODIFIER | HG02273.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0089 | 1 | 350 | 0.0029 | -312 | c.122 others(17): Show |
PXMP2 | ENSG00000176894.10 | transcript | ENST00000317479.8 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
RAD21L1_chr20_1221044_1260876 | 1258659 | TTCCCTCT others(305): Show |
T | downstream_gene_variant | MODIFIER | HG03688.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0136 | 1 | 364 | 0.0028 | -312 | c.*42 others(11): Show |
RAD21L1 | ENSG00000244588.6 | transcript | ENST00000683101.1 | protein_coding | 2784 | chr20 | TogoVar | ||||||
RIMBP2_chr12_130391133_130721299 | 130646142 | ACCACCTG others(305): Show |
A | intron_variant | MODIFIER | HG00741.hp2 HG02129.hp1 HG03834.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0002t0002others(1): Show | a0001c0001t0001g0113a0001c0001t0002g0037a0001c0002t0002g0034others(1): Show | 4 | 180 | 0.0222 | -312 | c.-35 others(21): Show |
RIMBP2 | ENSG00000060709.17 | transcript | ENST00000690449.1 | protein_coding | 1/22 | chr12 | TogoVar | ||||||
RORA_chr15_60483284_61234302 | 60816082 | GTATACTG others(305): Show |
G | intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0103 | 1 | 118 | 0.0085 | -312 | c.167 others(21): Show |
RORA | ENSG00000069667.16 | transcript | ENST00000335670.11 | protein_coding | 1/10 | chr15 | TogoVar | ||||||
RPN2_chr20_37174330_37246619 | 37187206 | TAAGATCA others(305): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(207): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0004a0002c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(7): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0007others(169): Show | 210 | 346 | 0.6069 | -312 | c.207 others(17): Show |
RPN2 | ENSG00000118705.18 | transcript | ENST00000237530.11 | protein_coding | 2/16 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
S1PR4_chr19_3173769_3185332 | 3177664 | AGGCTCTC others(305): Show |
A | upstream_gene_variant | MODIFIER | HG02145.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 418 | 0.0024 | -312 | c.-11 others(10): Show |
S1PR4 | ENSG00000125910.6 | transcript | ENST00000246115.5 | protein_coding | 1104 | chr19 | TogoVar | ||||||
S1PR4_chr19_3173769_3185332 | 3177778 | ATCGGGCT others(305): Show |
A | upstream_gene_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 418 | 0.0024 | -312 | c.-10 others(10): Show |
S1PR4 | ENSG00000125910.6 | transcript | ENST00000246115.5 | protein_coding | 990 | chr19 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168560598 | GCCCTGAG others(305): Show |
G | intron_variant | MODIFIER | NA19085.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0111 | 1 | 180 | 0.0056 | -312 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168560676 | ATTCTTGG others(305): Show |
A | intron_variant | MODIFIER | HG00609.hp1 HG02922.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0080a0001c0002t0002g0037 | 2 | 180 | 0.0111 | -312 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168561898 | GCCCTGAG others(305): Show |
G | intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0036 | 1 | 180 | 0.0056 | -312 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168561929 | TGGAGGAG others(305): Show |
T | intron_variant | MODIFIER | HG00423.hp1 HG00558.hp1 HG01243.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0006a0001c0002t0002others(1): Show | a0001c0001t0001g0075a0001c0001t0001g0078a0001c0001t0001g0081others(8): Show | 11 | 180 | 0.0611 | -312 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168614346 | GACCTCTT others(305): Show |
G | intron_variant | MODIFIER | HG03516.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0077 | 1 | 180 | 0.0056 | -312 | c.907 others(17): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 9/12 | chr6 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168615086 | GGCCTCTT others(305): Show |
G | intron_variant | MODIFIER | NA18951.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0011 | 1 | 180 | 0.0056 | -312 | c.907 others(17): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMYD3_chr1_245744347_246512279 | 245974465 | TAAAGCCA others(305): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG01496.hp2 HG01934.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0012others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0002others(3): Show | a0001c0001t0001g0055a0001c0001t0002g0004a0001c0001t0002g0081others(6): Show | 9 | 150 | 0.0600 | -312 | c.532 others(19): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | ||||||
SMYD3_chr1_245744347_246512279 | 245974701 | CAGGGAAA others(305): Show |
C | intron_variant | MODIFIER | HG02015.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 1 | 150 | 0.0067 | -312 | c.532 others(19): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar |