regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
YTHDC2_chr5_113508694_113600284 | 113587136 | CATATATA others(251): Show |
C | intron_variant | MODIFIER | NA20129.hp1 | a0002 | a0002c0012 | a0002c0012t0004 | a0002c0012t0004g0203 | 1 | 316 | 0.0032 | -258 | c.382 others(19): Show |
YTHDC2 | ENSG00000047188.16 | transcript | ENST00000161863.9 | protein_coding | 26/29 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
ZNF516_chr18_76352682_76500242 | 76393002 | GGGCAGGT others(251): Show |
G | intron_variant | MODIFIER | HG01175.hp2 HG01255.hp1 HG01928.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0002a0001c0001t0039a0001c0001t0066others(2): Show | a0001c0001t0002g0137a0001c0001t0039g0188a0001c0001t0066g0190others(2): Show | 5 | 346 | 0.0145 | -258 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar | ||||||
ZNF516_chr18_76352682_76500242 | 76393071 | AGGCAGGT others(251): Show |
A | intron_variant | MODIFIER | HG02055.hp2 HG02615.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0073a0001c0002t0090 | a0001c0001t0073g0020a0001c0002t0090g0119 | 2 | 346 | 0.0058 | -258 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar | ||||||
ZNF516_chr18_76352682_76500242 | 76393402 | AGGTGGTC others(251): Show |
A | intron_variant | MODIFIER | HG03942.hp2 NA19079.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0142 | a0001c0001t0004g0194a0001c0001t0142g0177 | 2 | 346 | 0.0058 | -258 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar | ||||||
ZNF516_chr18_76352682_76500242 | 76394399 | GGGCAGGT others(251): Show |
G | intron_variant | MODIFIER | NA19081.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0253 | 1 | 346 | 0.0029 | -258 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar | ||||||
ZNF662_chr3_42901142_42924334 | 42912486 | AATATATA others(251): Show |
A | intron_variant | MODIFIER | HG02630.hp2 HG02895.hp1 HG02896.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0022a0001c0001t0003g0022 | 4 | 382 | 0.0105 | -258 | c.152 others(15): Show |
ZNF662 | ENSG00000182983.15 | transcript | ENST00000440367.7 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
ZNF787_chr19_56082366_56126295 | 56104026 | ACCGCCGA others(251): Show |
A | intron_variant | MODIFIER | HG02818.hp2 | a0002 | a0002c0003 | a0002c0003t0060 | a0002c0003t0060g0294 | 1 | 410 | 0.0024 | -258 | c.-10 others(16): Show |
ZNF787 | ENSG00000142409.6 | transcript | ENST00000610935.2 | protein_coding | 1/2 | chr19 | TogoVar | ||||||
ADARB2_chr10_1172313_1742525 | 1327408 | CCCACTGC others(250): Show |
C | intron_variant | MODIFIER | HG02040.hp1 NA18982.hp2 NA18984.hp2 others(1): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0015 | a0001c0001t0003a0001c0001t0057a0002c0002t0007others(1): Show | a0001c0001t0003g0098a0001c0001t0057g0103a0002c0002t0007g0004others(1): Show | 4 | 106 | 0.0377 | -257 | c.107 others(21): Show |
ADARB2 | ENSG00000185736.16 | transcript | ENST00000381312.6 | protein_coding | 3/9 | chr10 | TogoVar | ||||||
ADARB2_chr10_1172313_1742525 | 1699615 | CCAATACA others(250): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00438.hp2 others(59): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(45): Show | a0001c0001t0001g0065a0001c0001t0003g0085a0001c0001t0003g0097others(59): Show | 62 | 106 | 0.5849 | -257 | c.100 others(19): Show |
ADARB2 | ENSG00000185736.16 | transcript | ENST00000381312.6 | protein_coding | 1/9 | chr10 | TogoVar | ||||||
CDK12_chr17_39456486_39539544 | 39498950 | TCTTTCTT others(250): Show |
T | intron_variant | MODIFIER | HG03195.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0078 | 1 | 260 | 0.0039 | -257 | c.242 others(19): Show |
CDK12 | ENSG00000167258.16 | transcript | ENST00000447079.6 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
CNTN1_chr12_40687439_41077415 | 40749547 | AGGTCATA others(250): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp2 others(45): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0037a0001c0001t0001g0038a0001c0001t0001g0042others(45): Show | 48 | 230 | 0.2087 | -257 | c.-77 others(19): Show |
CNTN1 | ENSG00000018236.15 | transcript | ENST00000551295.7 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CPNE7_chr16_89570758_89602246 | 89587785 | CCGTGTCA others(250): Show |
C | intron_variant | MODIFIER | HG01952.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0131 | 1 | 348 | 0.0029 | -257 | c.927 others(15): Show |
CPNE7 | ENSG00000178773.15 | transcript | ENST00000319518.13 | protein_coding | 9/14 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
DCDC2C_chr2_3698575_3853008 | 3800605 | TAAGTGCT others(250): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00408.hp1 others(53): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0025a0001c0001t0001g0026a0001c0001t0001g0036others(53): Show | 56 | 324 | 0.1728 | -257 | c.106 others(21): Show |
DCDC2C | ENSG00000214866.9 | transcript | ENST00000399143.9 | protein_coding | 10/10 | chr2 | TogoVar | ||||||
ERC1_chr12_986223_1500931 | 1085964 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG02280.hp1 HG03225.hp2 HG04199.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0086a0001c0001t0110others(1): Show | a0001c0001t0004g0078a0001c0001t0086g0060a0001c0001t0110g0013others(1): Show | 4 | 162 | 0.0247 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1086549 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG00741.hp2 | a0001 | a0001c0001 | a0001c0001t0109 | a0001c0001t0109g0014 | 1 | 162 | 0.0062 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1087007 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG00544.hp2 HG00741.hp2 HG01175.hp1 others(22): Show |
a0001a0002a0007 | a0001c0001a0001c0003a0001c0013others(2): Show | a0001c0001t0001a0001c0001t0009a0001c0001t0012others(20): Show | a0001c0001t0001g0076a0001c0001t0009g0007a0001c0001t0012g0018others(22): Show | 25 | 162 | 0.1543 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1087072 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG02451.hp1 | a0002 | a0002c0002 | a0002c0002t0131 | a0002c0002t0131g0065 | 1 | 162 | 0.0062 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1088050 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG00741.hp2 NA19090.hp1 |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0109 | a0001c0001t0012g0022a0001c0001t0109g0014 | 2 | 162 | 0.0124 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1088115 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG01891.hp2 HG02809.hp1 HG02970.hp1 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0004a0002c0002t0048a0002c0002t0064others(2): Show | a0001c0001t0004g0075a0002c0002t0048g0070a0002c0002t0064g0069others(2): Show | 5 | 162 | 0.0309 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1088428 | ATTATTAT others(250): Show |
A | intron_variant | MODIFIER | HG02922.hp1 | a0002 | a0002c0002 | a0002c0002t0054 | a0002c0002t0054g0135 | 1 | 162 | 0.0062 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1088493 | ATTATTAT others(250): Show |
A | intron_variant | MODIFIER | HG01891.hp1 HG02280.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0074a0002c0002t0060 | a0001c0001t0074g0039a0002c0002t0060g0040 | 2 | 162 | 0.0124 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1088765 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG00738.hp2 HG01106.hp1 HG01192.hp2 others(13): Show |
a0001a0002a0003 | a0001c0001a0001c0013a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0011others(12): Show | a0001c0001t0001g0076a0001c0001t0007g0044a0001c0001t0007g0048others(13): Show | 16 | 162 | 0.0988 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1089158 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG00738.hp1 HG00738.hp2 HG01106.hp1 others(18): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0013others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(17): Show | a0001c0001t0001g0076a0001c0001t0003g0029a0001c0001t0007g0044others(18): Show | 21 | 162 | 0.1296 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1089341 | ATTATTAT others(250): Show |
A | intron_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0001 | a0001c0001t0045 | a0001c0001t0045g0066 | 1 | 162 | 0.0062 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ERC1_chr12_986223_1500931 | 1089808 | GTTGTTGT others(250): Show |
G | intron_variant | MODIFIER | HG00323.hp1 HG00738.hp1 HG02965.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0093a0001c0001t0118 | a0001c0001t0003g0029a0001c0001t0093g0008a0001c0001t0118g0026 | 3 | 162 | 0.0185 | -257 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
GAL3ST2_chr2_241771822_241809287 | 241806501 | TCCCCCCT others(250): Show |
T | downstream_gene_variant | MODIFIER | NA20129.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0198 | 1 | 314 | 0.0032 | -257 | c.*23 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2215 | chr2 | TogoVar | ||||||
GAL3ST2_chr2_241771822_241809287 | 241806536 | TCCCCCCT others(250): Show |
T | downstream_gene_variant | MODIFIER | HG01243.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0120 | 1 | 314 | 0.0032 | -257 | c.*23 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2250 | chr2 | TogoVar | ||||||
GAL3ST2_chr2_241771822_241809287 | 241806763 | CCCCCCTC others(250): Show |
C | downstream_gene_variant | MODIFIER | HG00408.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0105 | 1 | 314 | 0.0032 | -257 | c.*25 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2477 | chr2 | TogoVar | ||||||
GALR1_chr18_77244848_77282900 | 77258929 | CATGGTGG others(250): Show |
C | intron_variant | MODIFIER | HG02630.hp1 | a0001 | a0001c0004 | a0001c0004t0028 | a0001c0004t0028g0321 | 1 | 366 | 0.0027 | -257 | c.732 others(17): Show |
GALR1 | ENSG00000166573.6 | transcript | ENST00000299727.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LRBA_chr4_150259435_151020284 | 150420387 | GTATATAT others(250): Show |
G | intron_variant | MODIFIER | HG00597.hp1 HG01099.hp2 HG01167.hp1 others(22): Show |
a0001a0002a0019 | a0001c0001a0001c0005a0001c0032others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0005t0001others(6): Show | a0001c0001t0001g0014a0001c0001t0001g0024a0001c0001t0001g0070others(22): Show | 25 | 180 | 0.1389 | -257 | c.704 others(19): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 46/56 | chr4 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150420419 | GTATATAT others(250): Show |
G | intron_variant | MODIFIER | HG03041.hp1 NA19004.hp1 NA19060.hp2 others(2): Show |
a0001a0015 | a0001c0001a0015c0029 | a0001c0001t0002a0001c0001t0004a0015c0029t0001 | a0001c0001t0002g0022a0001c0001t0002g0057a0001c0001t0002g0107others(2): Show | 5 | 180 | 0.0278 | -257 | c.704 others(19): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 46/56 | chr4 | TogoVar | ||||||
LRP1_chr12_57123483_57218361 | 57207123 | GTCCCAGC others(250): Show |
G | intron_variant | MODIFIER | HG02056.hp2 | a0001 | a0001c0003 | a0001c0003t0016 | a0001c0003t0016g0060 | 1 | 276 | 0.0036 | -257 | c.118 others(19): Show |
LRP1 | ENSG00000123384.14 | transcript | ENST00000243077.8 | protein_coding | 76/88 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
MLPH_chr2_237482251_237560322 | 237543095 | GGGACAGT others(250): Show |
G | intron_variant | MODIFIER | HG02165.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0199 | 1 | 286 | 0.0035 | -257 | c.153 others(17): Show |
MLPH | ENSG00000115648.14 | transcript | ENST00000264605.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
NEU4_chr2_241804193_241822413 | 241806501 | TCCCCCCT others(250): Show |
T | upstream_gene_variant | MODIFIER | HG02897.hp1 NA20129.hp1 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0003a0001c0004t0001 | a0001c0001t0003g0010a0001c0004t0001g0112 | 2 | 319 | 0.0063 | -257 | c.-27 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2691 | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241806536 | TCCCCCCT others(250): Show |
T | upstream_gene_variant | MODIFIER | HG01243.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0010 | 1 | 319 | 0.0031 | -257 | c.-27 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2656 | chr2 | TogoVar | ||||||
PLPPR5_chr1_98885245_99009861 | 98990624 | ATTAAACA others(250): Show |
A | intron_variant | MODIFIER | HG02055.hp2 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0009 | a0001c0001t0005g0171a0001c0001t0009g0172 | 2 | 280 | 0.0071 | -257 | c.237 others(19): Show |
PLPPR5 | ENSG00000117598.14 | transcript | ENST00000263177.5 | protein_coding | 1/5 | chr1 | TogoVar | ||||||
PTPRH_chr19_55176247_55214501 | 55208422 | TCTGGACT others(250): Show |
T | intron_variant | MODIFIER | HG03704.hp1 | a0001 | a0001c0041 | a0001c0041t0001 | a0001c0041t0001g0126 | 1 | 378 | 0.0027 | -257 | c.51+ others(13): Show |
PTPRH | ENSG00000080031.10 | transcript | ENST00000376350.8 | protein_coding | 1/19 | chr19 | TogoVar | ||||||
PTPRH_chr19_55176247_55214501 | 55208652 | TGGGTCTG others(250): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG01243.hp2 HG02895.hp1 others(7): Show |
a0001a0002a0003others(4): Show | a0001c0014a0002c0005a0003c0007others(4): Show | a0001c0014t0001a0002c0005t0002a0003c0007t0003others(4): Show | a0001c0014t0001g0044a0001c0014t0001g0049a0002c0005t0002g0013others(6): Show | 10 | 378 | 0.0265 | -257 | c.51+ others(13): Show |
PTPRH | ENSG00000080031.10 | transcript | ENST00000376350.8 | protein_coding | 1/19 | chr19 | TogoVar | ||||||
RASGEF1C_chr5_180095795_180214211 | 180096119 | TTGCTGTC others(250): Show |
T | downstream_gene_variant | MODIFIER | HG01884.hp2 HG02055.hp2 HG02109.hp2 others(8): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0083a0001c0002t0013a0001c0002t0023others(3): Show | a0001c0001t0083g0369a0001c0002t0013g0197a0001c0002t0013g0286others(8): Show | 11 | 370 | 0.0297 | -257 | c.*51 others(11): Show |
RASGEF1C | ENSG00000146090.16 | transcript | ENST00000361132.9 | protein_coding | 4675 | chr5 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289715 | CCCTGCTC others(250): Show |
C | intron_variant | MODIFIER | HG00642.hp1 | a0012 | a0012c0022 | a0012c0022t0006 | a0012c0022t0006g0132 | 1 | 290 | 0.0035 | -257 | c.166 others(17): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | chr1 | TogoVar | ||||||
SDHA_chr5_213320_262082 | 261582 | CCAGAGCA others(250): Show |
C | downstream_gene_variant | MODIFIER | NA18973.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0004 | 1 | 266 | 0.0038 | -257 | c.*51 others(11): Show |
SDHA | ENSG00000073578.18 | transcript | ENST00000264932.11 | protein_coding | 4501 | chr5 | TogoVar | ||||||
SDHA_chr5_213320_262082 | 261649 | GAGCATTA others(250): Show |
G | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00597.hp1 HG00621.hp2 others(45): Show |
a0001 | a0001c0001a0001c0009a0001c0010others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(3): Show | a0001c0001t0002g0001a0001c0001t0002g0004a0001c0001t0002g0006others(35): Show | 48 | 266 | 0.1805 | -257 | c.*52 others(11): Show |
SDHA | ENSG00000073578.18 | transcript | ENST00000264932.11 | protein_coding | 4568 | chr5 | TogoVar | ||||||
SKI_chr1_2223319_2315213 | 2281383 | GGACGCCC others(250): Show |
G | intron_variant | MODIFIER | NA21309.hp2 | a0001 | a0001c0001 | a0001c0001t0028 | a0001c0001t0028g0055 | 1 | 330 | 0.0030 | -257 | c.970 others(19): Show |
SKI | ENSG00000157933.11 | transcript | ENST00000378536.5 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SORCS2_chr4_7187538_7747827 | 7724674 | GGTAGTGG others(250): Show |
G | intron_variant | MODIFIER | HG01884.hp1 HG02109.hp1 NA19240.hp2 |
a0001a0009a0013 | a0001c0001a0009c0025a0013c0032 | a0001c0001t0020a0009c0025t0031a0013c0032t0030 | a0001c0001t0020g0052a0009c0025t0031g0025a0013c0032t0030g0149 | 3 | 168 | 0.0179 | -257 | c.261 others(17): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 19/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
STRC_chr15_43594563_43623800 | 43622808 | AGCTGGGA others(250): Show |
A | upstream_gene_variant | MODIFIER | HG02738.hp2 HG03688.hp2 HG04115.hp2 |
a0002 | a0002c0002a0002c0015 | a0002c0002t0001a0002c0015t0001 | a0002c0002t0001g0068a0002c0002t0001g0069a0002c0015t0001g0070 | 3 | 374 | 0.0080 | -257 | c.-43 others(11): Show |
STRC | ENSG00000242866.10 | transcript | ENST00000450892.7 | protein_coding | 4009 | chr15 | TogoVar | ||||||
THOP1_chr19_2780503_2820807 | 2818222 | ACAGAGCA others(250): Show |
A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp2 others(105): Show |
a0001a0004a0007others(1): Show | a0001c0001a0004c0004a0007c0012others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0222a0001c0001t0002g0002a0001c0001t0002g0004others(72): Show | 108 | 370 | 0.2919 | -257 | c.*49 others(11): Show |
THOP1 | ENSG00000172009.15 | transcript | ENST00000307741.11 | protein_coding | 2416 | chr19 | TogoVar | ||||||
TNK2_chr3_195858364_195913551 | 195880832 | ATGCCCCT others(250): Show |
A | intron_variant | MODIFIER | HG03579.hp1 NA18939.hp2 NA18993.hp1 |
a0001 | a0001c0001a0001c0002a0001c0013 | a0001c0001t0001a0001c0002t0001a0001c0013t0001 | a0001c0001t0001g0165a0001c0002t0001g0225a0001c0013t0001g0145 | 3 | 372 | 0.0081 | -257 | c.887 others(16): Show |
TNK2 | ENSG00000061938.21 | transcript | ENST00000672887.2 | protein_coding | 6/15 | chr3 | TogoVar | ||||||
TTLL8_chr22_50013575_50063298 | 50029062 | CCCCACAC others(250): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG01891.hp1 HG03139.hp1 others(1): Show |
a0004a0009 | a0004c0004a0009c0009 | a0004c0004t0001a0009c0009t0001 | a0004c0004t0001g0024a0004c0004t0001g0129a0009c0009t0001g0058others(1): Show | 4 | 224 | 0.0179 | -257 | c.225 others(19): Show |
TTLL8 | ENSG00000138892.12 | transcript | ENST00000433387.2 | protein_coding | 13/13 | chr22 | TogoVar | ||||||
ZNF554_chr19_2814868_2841735 | 2818222 | ACAGAGCA others(250): Show |
A | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp2 others(109): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0004a0001c0006others(8): Show | a0001c0001t0003a0001c0004t0003a0001c0004t0017others(19): Show | a0001c0001t0003g0299a0001c0004t0003g0020a0001c0004t0003g0021others(97): Show | 112 | 410 | 0.2732 | -257 | c.-18 others(11): Show |
ZNF554 | ENSG00000172006.12 | transcript | ENST00000317243.10 | protein_coding | 1645 | chr19 | TogoVar | ||||||
ARHGAP24_chr4_85470150_86007666 | 85875008 | ATAAGTTA others(249): Show |
A | intron_variant | MODIFIER | HG02080.hp2 | a0005 | a0005c0009 | a0005c0009t0002 | a0005c0009t0002g0064 | 1 | 108 | 0.0093 | -256 | c.269 others(19): Show |
ARHGAP24 | ENSG00000138639.18 | transcript | ENST00000395184.6 | protein_coding | 3/9 | chr4 | TogoVar |