view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FGFR2_chr10_121473332_121603444 | 121602994 | TGCCTCCC others(443): Show |
T | upstream_gene_variant | MODIFIER | HG02523.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0082 | 1 | 238 | 0.0042 | -450 | c.-56 others(11): Show |
FGFR2 | ENSG00000066468.24 | transcript | ENST00000358487.10 | protein_coding | 4551 | chr10 | TogoVar | |||||||
GALNT9_chr12_132191372_132334589 | 132241685 | ATACCCAT others(443): Show |
A | intron_variant | MODIFIER | NA18945.hp1 NA19056.hp1 NA19085.hp2 |
a0001 | a0001c0009 | a0001c0009t0002 | a0001c0009t0002g0168 a0001c0009t0002g0174 a0001c0009t0002g0177 |
3 | 182 | 0.0165 | -450 | c.107 others(19): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 6/10 | chr12 | TogoVar | |||||||
GALNT9_chr12_132191372_132334589 | 132242474 | CCCCTTCC others(443): Show |
C | intron_variant | MODIFIER | NA18961.hp2 | a0001 | a0001c0009 | a0001c0009t0002 | a0001c0009t0002g0175 | 1 | 143 | 0.0070 | -450 | c.107 others(19): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 6/10 | chr12 | TogoVar | |||||||
JAKMIP3_chr10_132060946_132189858 | 132160573 | TGGGGGGT others(443): Show |
T | intron_variant | MODIFIER | HG02615.hp1 | a0001 | a0001c0006 | a0001c0006t0003 | a0001c0006t0003g0151 | 1 | 114 | 0.0088 | -450 | c.222 others(19): Show |
JAKMIP3 | ENSG00000188385.13 | transcript | ENST00000684848.1 | protein_coding | 19/23 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
KLK4_chr19_50901351_50916395 | 50914030 | CTCTCTCT others(443): Show |
C | upstream_gene_variant | MODIFIER | HG01346.hp2 HG01361.hp2 HG02258.hp1 others(8): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0019 a0001c0001t0002g0059 a0001c0001t0003g0027 others(4): Show |
11 | 393 | 0.0280 | -450 | c.-31 others(11): Show |
KLK4 | ENSG00000167749.12 | transcript | ENST00000324041.6 | protein_coding | 2636 | chr19 | TogoVar | |||||||
NKD2_chr5_1003802_1043943 | 1023488 | TGTGGGCG others(443): Show |
T | intron_variant | MODIFIER | HG04228.hp1 | a0001 | a0001c0001 | a0001c0001t0014 | a0001c0001t0014g0145 | 1 | 206 | 0.0049 | -450 | c.142 others(17): Show |
NKD2 | ENSG00000145506.14 | transcript | ENST00000296849.10 | protein_coding | 3/9 | chr5 | TogoVar | |||||||
NKD2_chr5_1003802_1043943 | 1024554 | TGTGGGCG others(443): Show |
T | intron_variant | MODIFIER | HG01106.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0159 | 1 | 246 | 0.0041 | -450 | c.142 others(17): Show |
NKD2 | ENSG00000145506.14 | transcript | ENST00000296849.10 | protein_coding | 3/9 | chr5 | TogoVar | |||||||
PPP1R12B_chr1_202343699_202597702 | 202391570 | TTGAAGAT others(443): Show |
T | intron_variant | MODIFIER | NA18944.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0097 | 1 | 12 | 0.0833 | -450 | c.292 others(19): Show |
PPP1R12B | ENSG00000077157.23 | transcript | ENST00000608999.6 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RBFOX3_chr17_79084345_79616051 | 79512091 | AGTACAGC others(443): Show |
A | intron_variant | MODIFIER | HG00323.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0048 | 1 | 152 | 0.0066 | -450 | c.-31 others(21): Show |
RBFOX3 | ENSG00000167281.20 | transcript | ENST00000693108.1 | protein_coding | 1/14 | chr17 | TogoVar | |||||||
RNF223_chr1_1065967_1079306 | 1076743 | GCTACGGG others(443): Show |
G | upstream_gene_variant | MODIFIER | HG03486.hp1 | a0008 | a0008c0009 | a0008c0009t0001 | a0008c0009t0001g0045 | 1 | 307 | 0.0033 | -450 | c.-31 others(11): Show |
RNF223 | ENSG00000237330.3 | transcript | ENST00000453464.3 | protein_coding | 2438 | chr1 | TogoVar | |||||||
RPTOR_chr17_80539838_80971368 | 80743854 | GAGCCCTG others(443): Show |
G | intron_variant | MODIFIER | NA19057.hp2 | a0001 | a0001c0028 | a0001c0028t0019 | a0001c0028t0019g0024 | 1 | 116 | 0.0086 | -450 | c.655 others(18): Show |
RPTOR | ENSG00000141564.16 | transcript | ENST00000306801.8 | protein_coding | 5/33 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SARDH_chr9_133658560_133743352 | 133668415 | TCCCTCTC others(443): Show |
T | intron_variant | MODIFIER | HG02074.hp2 NA20752.hp2 |
a0001a0003 | a0001c0001a0003c0028 | a0001c0001t0001a0003c0028t0001 | a0001c0001t0001g0182 a0003c0028t0001g0111 |
2 | 255 | 0.0078 | -450 | c.249 others(19): Show |
SARDH | ENSG00000123453.19 | transcript | ENST00000439388.6 | protein_coding | 19/20 | chr9 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107710747 | CTATAAAA others(443): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00438.hp1 others(178): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(38): Show | a0001c0001t0001g0010 a0001c0001t0001g0052 a0001c0001t0001g0069 others(177): Show |
181 | 248 | 0.7298 | -450 | c.974 others(17): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 6/7 | chr6 | TogoVar | |||||||
SLC12A7_chr5_1045384_1117063 | 1061002 | AGGATCCC others(443): Show |
A | intron_variant | MODIFIER | HG00733.hp2 HG00741.hp2 HG01106.hp1 others(23): Show |
a0001a0002 | a0001c0005a0001c0009a0001c0013others(6): Show | a0001c0005t0002a0001c0009t0002a0001c0013t0003others(7): Show | a0001c0005t0002g0043 a0001c0005t0002g0044 a0001c0005t0002g0050 others(23): Show |
26 | 86 | 0.3023 | -450 | c.274 others(18): Show |
SLC12A7 | ENSG00000113504.21 | transcript | ENST00000264930.10 | protein_coding | 20/23 | chr5 | TogoVar | |||||||
SLC12A7_chr5_1045384_1117063 | 1071003 | CCCCCAGC others(443): Show |
C | intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0014 | 1 | 114 | 0.0088 | -450 | c.224 others(19): Show |
SLC12A7 | ENSG00000113504.21 | transcript | ENST00000264930.10 | protein_coding | 17/23 | chr5 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 617527 | AGGTAGCT others(443): Show |
A | intron_variant | MODIFIER | NA18962.hp1 | a0003 | a0003c0004 | a0003c0004t0006 | a0003c0004t0006g0016 | 1 | 230 | 0.0043 | -450 | c.111 others(19): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 11/21 | chr17 | TogoVar | |||||||
AFAP1L2_chr10_114289824_114409502 | 114305866 | GCAGGAGG others(442): Show |
G | intron_variant | MODIFIER | HG02895.hp2 | a0003 | a0003c0007 | a0003c0007t0006 | a0003c0007t0006g0207 | 1 | 260 | 0.0038 | -449 | c.107 others(18): Show |
AFAP1L2 | ENSG00000169129.16 | transcript | ENST00000304129.9 | protein_coding | 10/18 | chr10 | TogoVar | |||||||
AHRR_chr5_316714_443285 | 391488 | GGGCGCAG others(442): Show |
G | intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0148 | 1 | 265 | 0.0038 | -449 | c.351 others(19): Show |
AHRR | ENSG00000063438.20 | transcript | ENST00000684583.1 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
DIP2C_chr10_269201_694668 | 417746 | TCGGATAG others(442): Show |
T | intron_variant | MODIFIER | HG02280.hp1 | a0001 | a0001c0005 | a0001c0005t0002 | a0001c0005t0002g0006 | 1 | 80 | 0.0125 | -449 | c.739 others(16): Show |
DIP2C | ENSG00000151240.18 | transcript | ENST00000280886.12 | protein_coding | 6/36 | chr10 | TogoVar | |||||||
ERC1_chr12_986223_1500931 | 1090383 | TATTATTG others(442): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG01891.hp2 HG02615.hp1 others(7): Show |
a0001a0002a0007others(1): Show | a0001c0001a0002c0002a0007c0012others(1): Show | a0001c0001t0006a0001c0001t0009a0001c0001t0018others(7): Show | a0001c0001t0006g0120 a0001c0001t0009g0078 a0001c0001t0018g0080 others(7): Show |
10 | 160 | 0.0625 | -449 | c.108 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
MDFI_chr6_41633468_41659244 | 41651096 | ACTCCGGA others(442): Show |
A | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp2 HG00738.hp2 others(29): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0023 a0001c0001t0001g0029 a0001c0001t0001g0066 others(21): Show |
32 | 460 | 0.0696 | -449 | c.484 others(17): Show |
MDFI | ENSG00000112559.15 | transcript | ENST00000230321.11 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
MLPH_chr2_237482251_237560322 | 237542943 | GACAGTGG others(442): Show |
G | intron_variant | MODIFIER | HG00558.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0274 | 1 | 241 | 0.0041 | -449 | c.153 others(17): Show |
MLPH | ENSG00000115648.14 | transcript | ENST00000264605.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241806596 | TCCGCAGG others(442): Show |
T | upstream_gene_variant | MODIFIER | HG02572.hp2 | a0008 | a0008c0014 | a0008c0014t0003 | a0008c0014t0003g0189 | 1 | 318 | 0.0031 | -449 | c.-26 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2596 | chr2 | TogoVar | |||||||
OTUD7A_chr15_31470398_31875673 | 31510970 | AACATATG others(442): Show |
A | intron_variant | MODIFIER | HG02622.hp1 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0012 | 1 | 244 | 0.0041 | -449 | c.894 others(17): Show |
OTUD7A | ENSG00000169918.10 | transcript | ENST00000307050.6 | protein_coding | 8/12 | chr15 | TogoVar | |||||||
RASGRF1_chr15_78954906_79095780 | 78970478 | CATGGTCC others(442): Show |
C | intron_variant | MODIFIER | NA19006.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0132 | 1 | 312 | 0.0032 | -449 | c.368 others(18): Show |
RASGRF1 | ENSG00000058335.16 | transcript | ENST00000558480.7 | protein_coding | 26/26 | chr15 | TogoVar | |||||||
SDHA_chr5_213320_262082 | 261382 | GCCTCCCG others(442): Show |
G | downstream_gene_variant | MODIFIER | HG01243.hp1 HG01256.hp1 HG01517.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0007 a0001c0001t0002g0089 a0001c0001t0002g0090 |
4 | 264 | 0.0152 | -449 | c.*49 others(11): Show |
SDHA | ENSG00000073578.18 | transcript | ENST00000264932.11 | protein_coding | 4301 | chr5 | TogoVar | |||||||
SMYD3_chr1_245744347_246512279 | 246071835 | TCCTGTTA others(442): Show |
T | intron_variant | MODIFIER | HG02965.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0128 | 1 | 150 | 0.0067 | -449 | c.532 others(21): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | |||||||
TMEM132D_chr12_129066726_129909025 | 129856463 | GGAGTCCG others(442): Show |
G | intron_variant | MODIFIER | HG00741.hp2 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0077 | 1 | 76 | 0.0132 | -449 | c.79+ others(17): Show |
TMEM132D | ENSG00000151952.16 | transcript | ENST00000422113.7 | protein_coding | 1/8 | chr12 | TogoVar | |||||||
TSPAN14_chr10_80449310_80527631 | 80482350 | AATCTCAG others(442): Show |
A | intron_variant | MODIFIER | HG01433.hp1 HG02970.hp2 HG02976.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0019 | a0001c0001t0013g0087 a0001c0001t0013g0088 a0001c0001t0013g0089 others(4): Show |
7 | 250 | 0.0280 | -449 | c.-17 others(17): Show |
TSPAN14 | ENSG00000108219.16 | transcript | ENST00000429989.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
WDR20_chr14_102134897_102215527 | 102172218 | TGGGGGGT others(442): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG04115.hp1 NA21309.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0254 a0001c0002t0001g0255 a0001c0002t0001g0256 |
3 | 262 | 0.0115 | -449 | c.250 others(19): Show |
WDR20 | ENSG00000140153.18 | transcript | ENST00000342702.8 | protein_coding | 1/2 | chr14 | TogoVar | |||||||
ABR_chr17_998519_1184981 | 1131492 | CCTTTGCA others(441): Show |
C | intron_variant | MODIFIER | HG00642.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0063 | 1 | 332 | 0.0030 | -448 | c.62- others(15): Show |
ABR | ENSG00000159842.16 | transcript | ENST00000302538.10 | protein_coding | 1/22 | chr17 | TogoVar | |||||||
CTDP1_chr18_79674803_79759503 | 79745511 | CCCCGCGT others(441): Show |
C | intron_variant | MODIFIER | HG02080.hp2 NA18943.hp1 NA18950.hp2 others(3): Show |
a0001a0003a0016 | a0001c0003a0003c0005a0016c0034 | a0001c0003t0001a0003c0005t0002a0016c0034t0002 | a0001c0003t0001g0048 a0001c0003t0001g0049 a0003c0005t0002g0118 others(3): Show |
6 | 344 | 0.0174 | -448 | c.274 others(19): Show |
CTDP1 | ENSG00000060069.18 | transcript | ENST00000613122.5 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
DNHD1_chr11_6492280_6577020 | 6551833 | CGGGAGGC others(441): Show |
C | intron_variant | MODIFIER | HG01358.hp1 HG01943.hp2 HG02257.hp2 others(17): Show |
a0008a0012a0016others(7): Show | a0008c0103a0012c0006a0012c0071others(9): Show | a0008c0103t0001a0012c0006t0001a0012c0071t0001others(9): Show | a0008c0103t0001g0202 a0012c0006t0001g0322 a0012c0006t0001g0323 others(17): Show |
20 | 340 | 0.0588 | -448 | c.738 others(19): Show |
DNHD1 | ENSG00000179532.13 | transcript | ENST00000254579.11 | protein_coding | 24/42 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ITGB1BP1_chr2_9398475_9428528 | 9406031 | GTGTCACT others(441): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01192.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0019 | 1 | 152 | 0.0066 | -448 | c.*35 others(9): Show |
ITGB1BP1 | ENSG00000119185.13 | transcript | ENST00000355346.9 | protein_coding | 7/7 | 355 | chr2 | TogoVar | ||||||
LETMD1_chr12_51043327_51065424 | 51044307 | TGGCCTCC others(441): Show |
T | upstream_gene_variant | MODIFIER | HG00140.hp2 HG02698.hp1 |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0068 a0001c0001t0006g0069 |
2 | 414 | 0.0048 | -448 | c.-40 others(11): Show |
LETMD1 | ENSG00000050426.16 | transcript | ENST00000262055.9 | protein_coding | 4019 | chr12 | TogoVar | |||||||
LYRM4_chr6_5103419_5265950 | 5134973 | GCTCCCGG others(441): Show |
G | intron_variant | MODIFIER | HG00639.hp2 HG00642.hp2 HG01069.hp1 others(41): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0004a0002c0002t0004a0002c0002t0005others(2): Show | a0001c0001t0004g0036 a0001c0001t0004g0046 a0001c0001t0004g0047 others(41): Show |
44 | 283 | 0.1555 | -448 | c.208 others(19): Show |
LYRM4 | ENSG00000214113.11 | transcript | ENST00000330636.9 | protein_coding | 2/2 | chr6 | TogoVar | |||||||
LYRM4_chr6_5103419_5265950 | 5135057 | GCTCCCGG others(441): Show |
G | intron_variant | MODIFIER | HG00738.hp1 HG00738.hp2 HG01081.hp1 others(40): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0007others(9): Show | a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0038 others(40): Show |
43 | 259 | 0.1660 | -448 | c.208 others(19): Show |
LYRM4 | ENSG00000214113.11 | transcript | ENST00000330636.9 | protein_coding | 2/2 | chr6 | TogoVar | |||||||
MAD1L1_chr7_1810795_2237945 | 1991285 | ACCGCTGG others(441): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00642.hp2 HG02922.hp1 others(6): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0131 a0001c0001t0001g0184 a0001c0001t0001g0185 others(6): Show |
9 | 132 | 0.0682 | -448 | c.141 others(21): Show |
MAD1L1 | ENSG00000002822.16 | transcript | ENST00000265854.12 | protein_coding | 14/18 | chr7 | TogoVar | |||||||
P2RX5_chr17_3668227_3701155 | 3685658 | CCCAGCCT others(441): Show |
C | intron_variant | MODIFIER | NA18957.hp2 NA18978.hp2 NA19003.hp1 others(1): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0003t0001a0002c0002t0002 | a0001c0001t0001g0104 a0001c0001t0001g0306 a0001c0003t0001g0265 others(1): Show |
4 | 208 | 0.0192 | -448 | c.981 others(17): Show |
P2RX5 | ENSG00000083454.23 | transcript | ENST00000225328.10 | protein_coding | 9/11 | chr17 | TogoVar | |||||||
PCDH15_chr10_53797771_54806231 | 54133924 | ACATTTTG others(441): Show |
A | intron_variant | MODIFIER | HG00738.hp2 HG00741.hp1 HG01167.hp2 others(17): Show |
a0001a0004a0006others(7): Show | a0001c0001a0004c0004a0006c0006others(7): Show | a0001c0001t0003a0004c0004t0001a0004c0004t0002others(14): Show | a0001c0001t0003g0019 a0004c0004t0001g0045 a0004c0004t0001g0052 others(17): Show |
20 | 100 | 0.2000 | -448 | c.178 others(18): Show |
PCDH15 | ENSG00000150275.20 | transcript | ENST00000644397.2 | protein_coding | 14/37 | chr10 | TogoVar | |||||||
PCDH15_chr10_53816099_54806231 | 54133924 | ACATTTTG others(441): Show |
A | intron_variant | MODIFIER | HG00738.hp1 HG00741.hp1 HG01175.hp1 others(16): Show |
a0001a0004a0006others(5): Show | a0001c0001a0004c0004a0004c0043others(7): Show | a0001c0001t0001a0004c0004t0001a0004c0004t0005others(8): Show | a0001c0001t0001g0019 a0001c0001t0001g0021 a0004c0004t0001g0026 others(16): Show |
19 | 92 | 0.2065 | -448 | c.178 others(18): Show |
PCDH15 | ENSG00000150275.20 | transcript | ENST00000320301.11 | protein_coding | 14/32 | chr10 | TogoVar | |||||||
PLCXD1_chrX_276381_308356 | 277521 | TGGACACC others(441): Show |
T | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00423.hp2 HG00438.hp2 others(24): Show |
a0001 | a0001c0001a0001c0002a0001c0010 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(15): Show | a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0084 others(24): Show |
27 | 145 | 0.1862 | -448 | c.-41 others(11): Show |
PLCXD1 | ENSG00000182378.15 | transcript | ENST00000381657.8 | protein_coding | 3859 | chrX | TogoVar | |||||||
PPARA_chr22_46145526_46248755 | 46174203 | AGAGAGAG others(441): Show |
A | intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0065 | a0001c0001t0065g0030 | 1 | 198 | 0.0051 | -448 | c.-12 others(19): Show |
PPARA | ENSG00000186951.17 | transcript | ENST00000407236.6 | protein_coding | 2/8 | chr22 | TogoVar | |||||||
PRDM15_chr21_41793225_41884344 | 41806309 | ACCACCAC others(441): Show |
A | intron_variant | MODIFIER | HG02622.hp1 HG02647.hp2 HG03516.hp1 |
a0001 | a0001c0005 | a0001c0005t0009 | a0001c0005t0009g0001 a0001c0005t0009g0330 |
3 | 403 | 0.0074 | -448 | c.265 others(19): Show |
PRDM15 | ENSG00000141956.14 | transcript | ENST00000398548.6 | protein_coding | 21/23 | chr21 | TogoVar | |||||||
RAB40C_chr16_585066_634268 | 611628 | CAGGGACA others(441): Show |
C | intron_variant | MODIFIER | HG02622.hp1 HG03130.hp1 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0152 a0001c0001t0007g0153 a0001c0001t0007g0154 |
3 | 348 | 0.0086 | -448 | c.143 others(17): Show |
RAB40C | ENSG00000197562.10 | transcript | ENST00000248139.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
RNF223_chr1_1065967_1079306 | 1076227 | TGGCTGAG others(441): Show |
T | upstream_gene_variant | MODIFIER | HG02922.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0016 | 2 | 291 | 0.0069 | -448 | c.-26 others(11): Show |
RNF223 | ENSG00000237330.3 | transcript | ENST00000453464.3 | protein_coding | 1922 | chr1 | TogoVar | |||||||
SCUBE1_chr22_43192280_43348372 | 43280986 | TCAGTCAC others(441): Show |
T | intron_variant | MODIFIER | HG02071.hp2 NA21309.hp1 |
a0003a0011 | a0003c0001a0011c0058 | a0003c0001t0001a0011c0058t0005 | a0003c0001t0001g0225 a0011c0058t0005g0262 |
2 | 221 | 0.0090 | -448 | c.484 others(18): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4/21 | chr22 | TogoVar | |||||||
SDHA_chr5_213320_262082 | 260529 | CAGCATTA others(441): Show |
C | downstream_gene_variant | MODIFIER | HG01175.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0094 | 1 | 249 | 0.0040 | -448 | c.*41 others(11): Show |
SDHA | ENSG00000073578.18 | transcript | ENST00000264932.11 | protein_coding | 3448 | chr5 | TogoVar | |||||||
SDHA_chr5_213320_262082 | 260817 | GAGCATTA others(441): Show |
G | downstream_gene_variant | MODIFIER | NA18941.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0123 | 1 | 183 | 0.0055 | -448 | c.*43 others(11): Show |
SDHA | ENSG00000073578.18 | transcript | ENST00000264932.11 | protein_coding | 3736 | chr5 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23837363 | ATATATTT others(441): Show |
A | intron_variant | MODIFIER | NA19003.hp1 | a0001 | a0001c0001 | a0001c0001t0019 | a0001c0001t0019g0075 | 1 | 207 | 0.0048 | -448 | c.481 others(17): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar |