regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FAM227A_chr22_38573118_38661392 | 38648357 | AAGCACTT others(358): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00735.hp2 HG01069.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0033a0001c0001t0034 | a0001c0001t0014g0163a0001c0001t0014g0164a0001c0001t0014g0165others(4): Show | 7 | 328 | 0.0213 | -365 | c.142 others(17): Show |
FAM227A | ENSG00000184949.18 | transcript | ENST00000535113.7 | protein_coding | 2/16 | chr22 | TogoVar | ||||||
IBA57_chr1_228160804_228187257 | 228174129 | CTGTGGGC others(358): Show |
C | intron_variant | MODIFIER | HG00609.hp2 HG00673.hp1 NA19066.hp2 |
a0001 | a0001c0001 | a0001c0001t0157a0001c0001t0158a0001c0001t0159 | a0001c0001t0157g0036a0001c0001t0158g0036a0001c0001t0159g0036 | 3 | 416 | 0.0072 | -365 | c.342 others(15): Show |
IBA57 | ENSG00000181873.13 | transcript | ENST00000366711.4 | protein_coding | 1/2 | chr1 | TogoVar | ||||||
LHPP_chr10_124456823_124619141 | 124506963 | GGCGGGTA others(358): Show |
G | intron_variant | MODIFIER | HG01257.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0091 | 1 | 260 | 0.0039 | -365 | c.624 others(17): Show |
LHPP | ENSG00000107902.14 | transcript | ENST00000368842.10 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LHPP_chr10_124456823_124619141 | 124506965 | CGGGTAGA others(358): Show |
C | intron_variant | MODIFIER | NA18965.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0236 | 1 | 260 | 0.0039 | -365 | c.624 others(17): Show |
LHPP | ENSG00000107902.14 | transcript | ENST00000368842.10 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LRRC27_chr10_132327193_132386508 | 132358670 | GTGGAGCA others(358): Show |
G | intron_variant | MODIFIER | NA18990.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0070 | 1 | 290 | 0.0035 | -365 | c.117 others(19): Show |
LRRC27 | ENSG00000148814.18 | transcript | ENST00000368614.8 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LUC7L2_chr7_139354894_139428454 | 139424841 | GCCAGGCT others(358): Show |
G | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00408.hp2 others(155): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(4): Show | a0001c0001t0002g0001a0001c0001t0002g0004a0001c0001t0002g0005others(142): Show | 158 | 276 | 0.5725 | -365 | c.*25 others(11): Show |
LUC7L2 | ENSG00000146963.18 | transcript | ENST00000354926.9 | protein_coding | 1388 | chr7 | TogoVar | ||||||
LYRM4_chr6_5103419_5265950 | 5135062 | CGGGACTG others(358): Show |
C | intron_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0167 | 1 | 286 | 0.0035 | -365 | c.208 others(19): Show |
LYRM4 | ENSG00000214113.11 | transcript | ENST00000330636.9 | protein_coding | 2/2 | chr6 | TogoVar | ||||||
MYOM2_chr8_2040046_2150456 | 2085574 | TGTTGTGA others(358): Show |
T | intron_variant | MODIFIER | HG01168.hp2 HG01169.hp1 |
a0012 | a0012c0011 | a0012c0011t0001 | a0012c0011t0001g0003 | 2 | 403 | 0.0050 | -365 | c.164 others(17): Show |
MYOM2 | ENSG00000036448.10 | transcript | ENST00000262113.9 | protein_coding | 14/36 | chr8 | TogoVar | ||||||
NHERF2_chr16_2021902_2044026 | 2034364 | ACTCCTGT others(358): Show |
A | intron_variant | MODIFIER | HG02738.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0136 | 1 | 422 | 0.0024 | -365 | c.415 others(17): Show |
NHERF2 | ENSG00000065054.14 | transcript | ENST00000424542.7 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
OTUD7A_chr15_31470398_31875673 | 31510584 | TACATATG others(358): Show |
T | intron_variant | MODIFIER | HG00423.hp1 HG01175.hp1 |
a0001a0002 | a0001c0001a0002c0008 | a0001c0001t0061a0002c0008t0017 | a0001c0001t0061g0183a0002c0008t0017g0090 | 2 | 244 | 0.0082 | -365 | c.894 others(17): Show |
OTUD7A | ENSG00000169918.10 | transcript | ENST00000307050.6 | protein_coding | 8/12 | chr15 | TogoVar | ||||||
PID1_chr2_229018973_229276287 | 229184404 | ATATATCT others(358): Show |
A | intron_variant | MODIFIER | HG01106.hp1 HG01884.hp1 HG02055.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0129a0001c0001t0002g0135a0001c0001t0003g0026others(7): Show | 10 | 256 | 0.0391 | -365 | c.31- others(17): Show |
PID1 | ENSG00000153823.19 | transcript | ENST00000392055.8 | protein_coding | 1/2 | chr2 | TogoVar | ||||||
PTPRH_chr19_55176247_55214501 | 55208057 | CCTGGACT others(358): Show |
C | intron_variant | MODIFIER | HG02559.hp2 HG02818.hp1 HG02970.hp2 others(3): Show |
a0001a0002a0004others(1): Show | a0001c0014a0002c0013a0002c0036others(2): Show | a0001c0014t0001a0002c0013t0001a0002c0036t0002others(2): Show | a0001c0014t0001g0315a0002c0013t0001g0030a0002c0036t0002g0314others(2): Show | 6 | 378 | 0.0159 | -365 | c.51+ others(13): Show |
PTPRH | ENSG00000080031.10 | transcript | ENST00000376350.8 | protein_coding | 1/19 | chr19 | TogoVar | ||||||
PXDN_chr2_1626887_1749515 | 1703246 | GGGGCAAC others(358): Show |
G | intron_variant | MODIFIER | HG03491.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0181 | 1 | 322 | 0.0031 | -365 | c.201 others(19): Show |
PXDN | ENSG00000130508.11 | transcript | ENST00000252804.9 | protein_coding | 1/22 | chr2 | TogoVar | ||||||
RNF17_chr13_24759169_24884921 | 24878729 | CCACATAG others(358): Show |
C | intron_variant | MODIFIER | HG02145.hp1 | a0003 | a0003c0006 | a0003c0006t0001 | a0003c0006t0001g0155 | 1 | 426 | 0.0024 | -365 | c.477 others(16): Show |
RNF17 | ENSG00000132972.19 | transcript | ENST00000255324.10 | protein_coding | 34/35 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
TCERG1L_chr10_131087391_131316721 | 131289536 | TGTGTATG others(358): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(227): Show |
a0001a0004a0006others(3): Show | a0001c0001a0001c0002a0001c0009others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0020a0001c0001t0001g0021a0001c0001t0001g0025others(227): Show | 230 | 324 | 0.7099 | -365 | c.670 others(19): Show |
TCERG1L | ENSG00000176769.9 | transcript | ENST00000368642.4 | protein_coding | 3/11 | chr10 | TogoVar | ||||||
TRIM46_chr1_155168849_155189970 | 155188853 | GGCGGTGG others(358): Show |
G | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00423.hp1 others(81): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(23): Show | 84 | 348 | 0.2414 | -365 | c.*46 others(11): Show |
TRIM46 | ENSG00000163462.19 | transcript | ENST00000334634.9 | protein_coding | 3884 | chr1 | TogoVar | ||||||
TRUB1_chr10_114933195_114982676 | 114935326 | CGAGGGGT others(358): Show |
C | upstream_gene_variant | MODIFIER | HG00639.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0153 | 1 | 238 | 0.0042 | -365 | c.-29 others(11): Show |
TRUB1 | ENSG00000165832.6 | transcript | ENST00000298746.5 | protein_coding | 2868 | chr10 | TogoVar | ||||||
VGLL4_chr3_11551069_11648915 | 11604406 | GCAGCCTC others(358): Show |
G | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp2 HG02723.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0008others(4): Show | a0001c0001t0002g0303a0001c0001t0002g0304a0001c0001t0004g0281others(7): Show | 10 | 388 | 0.0258 | -365 | c.83- others(15): Show |
VGLL4 | ENSG00000144560.16 | transcript | ENST00000430365.7 | protein_coding | 1/4 | chr3 | TogoVar | ||||||
ZNF516_chr18_76352682_76500242 | 76392982 | CAGGTGGT others(358): Show |
C | intron_variant | MODIFIER | NA19056.hp2 | a0001 | a0001c0001 | a0001c0001t0040 | a0001c0001t0040g0341 | 1 | 346 | 0.0029 | -365 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar | ||||||
ABCG1_chr21_42214140_42302244 | 42283783 | AACCCAGA others(357): Show |
A | intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0001 | a0001c0001t0018 | a0001c0001t0018g0065 | 1 | 354 | 0.0028 | -364 | c.735 others(15): Show |
ABCG1 | ENSG00000160179.19 | transcript | ENST00000398449.8 | protein_coding | 6/14 | chr21 | TogoVar | ||||||
ABCG1_chr21_42214140_42302244 | 42283800 | ACCCCCCC others(357): Show |
A | intron_variant | MODIFIER | HG02809.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0098 | 1 | 354 | 0.0028 | -364 | c.735 others(15): Show |
ABCG1 | ENSG00000160179.19 | transcript | ENST00000398449.8 | protein_coding | 6/14 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
ADARB2_chr10_1172313_1742525 | 1238895 | CCCTGCAT others(357): Show |
C | intron_variant | MODIFIER | NA18988.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0094 | 1 | 106 | 0.0094 | -364 | c.136 others(19): Show |
ADARB2 | ENSG00000185736.16 | transcript | ENST00000381312.6 | protein_coding | 5/9 | chr10 | TogoVar | ||||||
AK4_chr1_65143203_65237145 | 65216547 | TGCTTTTC others(357): Show |
T | intron_variant | MODIFIER | HG00642.hp2 HG00738.hp1 HG01069.hp2 others(44): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0009others(2): Show | a0001c0001t0004a0001c0001t0009a0001c0001t0014others(26): Show | a0001c0001t0004g0264a0001c0001t0004g0265a0001c0001t0009g0267others(44): Show | 47 | 300 | 0.1567 | -364 | c.266 others(17): Show |
AK4 | ENSG00000162433.15 | transcript | ENST00000327299.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
C1QTNF8_chr16_1083226_1101244 | 1092866 | TGCACACA others(357): Show |
T | intron_variant | MODIFIER | HG02622.hp2 HG02647.hp1 NA18906.hp2 |
a0001 | a0001c0003 | a0001c0003t0013 | a0001c0003t0013g0161a0001c0003t0013g0162a0001c0003t0013g0163 | 3 | 396 | 0.0076 | -364 | c.*4+ others(13): Show |
C1QTNF8 | ENSG00000184471.10 | transcript | ENST00000328449.6 | protein_coding | 4/4 | chr16 | TogoVar | ||||||
CSF2RA_chrX_1263814_1314935 | 1302828 | CGATTACA others(357): Show |
C | intron_variant | MODIFIER | HG02572.hp2 HG03516.hp2 |
a0002a0004 | a0002c0003a0004c0010 | a0002c0003t0002a0004c0010t0003 | a0002c0003t0002g0140a0004c0010t0003g0158 | 2 | 159 | 0.0126 | -364 | c.947 others(16): Show |
CSF2RA | ENSG00000198223.18 | transcript | ENST00000381529.9 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
CTDP1_chr18_79674803_79759503 | 79745318 | TGCGTCCC others(357): Show |
T | intron_variant | MODIFIER | HG00639.hp2 HG01081.hp1 HG01081.hp2 others(4): Show |
a0001a0002a0005 | a0001c0001a0001c0028a0001c0035others(2): Show | a0001c0001t0002a0001c0028t0001a0001c0035t0002others(2): Show | a0001c0001t0002g0002a0001c0028t0001g0202a0001c0035t0002g0002others(4): Show | 7 | 378 | 0.0185 | -364 | c.274 others(19): Show |
CTDP1 | ENSG00000060069.18 | transcript | ENST00000613122.5 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
CTDP1_chr18_79674803_79759503 | 79745371 | GCCCGCGT others(357): Show |
G | intron_variant | MODIFIER | HG01258.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0152 | 1 | 378 | 0.0027 | -364 | c.274 others(19): Show |
CTDP1 | ENSG00000060069.18 | transcript | ENST00000613122.5 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
CTDP1_chr18_79674803_79759503 | 79745567 | CCCCGCGT others(357): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00735.hp2 HG01257.hp2 others(9): Show |
a0001a0002 | a0001c0003a0001c0042a0002c0006 | a0001c0003t0001a0001c0003t0010a0001c0042t0001others(1): Show | a0001c0003t0001g0003a0001c0003t0001g0035a0001c0003t0001g0040others(8): Show | 12 | 378 | 0.0318 | -364 | c.274 others(19): Show |
CTDP1 | ENSG00000060069.18 | transcript | ENST00000613122.5 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
CTDP1_chr18_79674803_79759503 | 79745735 | GCCCGCGT others(357): Show |
G | intron_variant | MODIFIER | HG04228.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0062 | 1 | 378 | 0.0027 | -364 | c.274 others(19): Show |
CTDP1 | ENSG00000060069.18 | transcript | ENST00000613122.5 | protein_coding | 12/12 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
DBNDD1_chr16_89999871_90024456 | 90023595 | GGAGGGAT others(357): Show |
G | upstream_gene_variant | MODIFIER | HG00323.hp1 HG02257.hp1 HG02300.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0049a0001c0001t0003g0019a0001c0001t0003g0048 | 4 | 412 | 0.0097 | -364 | c.-46 others(11): Show |
DBNDD1 | ENSG00000003249.15 | transcript | ENST00000002501.11 | protein_coding | 4140 | chr16 | TogoVar | ||||||
DUSP16_chr12_12468282_12567863 | 12515900 | TGAGTAGC others(357): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0034a0001c0001t0035 | a0001c0001t0034g0254a0001c0001t0035g0255 | 2 | 352 | 0.0057 | -364 | c.367 others(17): Show |
DUSP16 | ENSG00000111266.9 | transcript | ENST00000298573.9 | protein_coding | 3/6 | chr12 | TogoVar | ||||||
ELL2_chr5_95880098_95966851 | 95927389 | ATATATAG others(357): Show |
A | intron_variant | MODIFIER | HG00609.hp1 NA18941.hp1 NA18985.hp2 others(1): Show |
a0001 | a0001c0006 | a0001c0006t0004a0001c0006t0011 | a0001c0006t0004g0042a0001c0006t0004g0047a0001c0006t0011g0027others(1): Show | 4 | 314 | 0.0127 | -364 | c.196 others(17): Show |
ELL2 | ENSG00000118985.16 | transcript | ENST00000237853.9 | protein_coding | 2/11 | chr5 | TogoVar | ||||||
EXOC3L4_chr14_103089725_103115559 | 103109192 | GCCACCCT others(357): Show |
G | intron_variant | MODIFIER | NA18959.hp1 | a0002 | a0002c0006 | a0002c0006t0002 | a0002c0006t0002g0317 | 1 | 404 | 0.0025 | -364 | c.197 others(17): Show |
EXOC3L4 | ENSG00000205436.8 | transcript | ENST00000688303.1 | protein_coding | 11/11 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
GAL3ST2_chr2_241771822_241809287 | 241805676 | CCCCTCAG others(357): Show |
C | downstream_gene_variant | MODIFIER | HG03130.hp2 HG03710.hp2 homoSapiens_chm13v2.hp1 |
a0001a0002a0007 | a0001c0001a0002c0002a0007c0008 | a0001c0001t0001a0002c0002t0002a0007c0008t0001 | a0001c0001t0001g0027a0002c0002t0002g0129a0007c0008t0001g0068 | 3 | 314 | 0.0096 | -364 | c.*15 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1390 | chr2 | TogoVar | ||||||
GAS8_chr16_90017680_90049960 | 90023595 | GGAGGGAT others(357): Show |
G | intron_variant | MODIFIER | HG00323.hp2 HG02257.hp1 HG02300.hp2 others(1): Show |
a0001 | a0001c0003 | a0001c0003t0010 | a0001c0003t0010g0128a0001c0003t0010g0129a0001c0003t0010g0130others(1): Show | 4 | 390 | 0.0103 | -364 | c.3+8 others(12): Show |
GAS8 | ENSG00000141013.17 | transcript | ENST00000268699.9 | protein_coding | 1/10 | chr16 | TogoVar | ||||||
GLT6D1_chr9_135618648_135644540 | 135619859 | TCTCCCCC others(357): Show |
T | downstream_gene_variant | MODIFIER | NA18989.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0160 | 1 | 436 | 0.0023 | -364 | c.*38 others(11): Show |
GLT6D1 | ENSG00000204007.8 | transcript | ENST00000371763.6 | protein_coding | 3788 | chr9 | TogoVar | ||||||
IDI1_chr10_1034419_1054119 | 1046466 | GCTACACC others(357): Show |
G | intron_variant | MODIFIER | HG01928.hp1 HG01934.hp1 HG03834.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0017 | 5 | 438 | 0.0114 | -364 | c.140 others(17): Show |
IDI1 | ENSG00000067064.13 | transcript | ENST00000381344.8 | protein_coding | 1/4 | chr10 | TogoVar | ||||||
JARID2_chr6_15241069_15527042 | 15283149 | TTTGTATT others(357): Show |
T | intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0002 | a0001c0002t0006 | a0001c0002t0006g0139 | 1 | 284 | 0.0035 | -364 | c.45+ others(17): Show |
JARID2 | ENSG00000008083.14 | transcript | ENST00000341776.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
JARID2_chr6_15241069_15527042 | 15283172 | GTTTCACC others(357): Show |
G | intron_variant | MODIFIER | HG02145.hp1 HG02895.hp1 HG02897.hp1 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0011a0001c0004t0002 | a0001c0001t0001g0146a0001c0001t0011g0026a0001c0001t0011g0027others(2): Show | 5 | 284 | 0.0176 | -364 | c.45+ others(17): Show |
JARID2 | ENSG00000008083.14 | transcript | ENST00000341776.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
JAZF1_chr7_27825577_28185795 | 28174681 | AACAGTGA others(357): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00642.hp1 others(20): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(2): Show | a0001c0001t0001g0120a0001c0001t0001g0121a0001c0001t0001g0123others(20): Show | 23 | 206 | 0.1117 | -364 | c.115 others(17): Show |
JAZF1 | ENSG00000153814.13 | transcript | ENST00000283928.10 | protein_coding | 1/4 | chr7 | TogoVar | ||||||
LMLN_chr3_197955217_198048720 | 198004562 | CATCTATA others(357): Show |
C | intron_variant | MODIFIER | NA19007.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0175 | 1 | 258 | 0.0039 | -364 | c.131 others(19): Show |
LMLN | ENSG00000185621.11 | transcript | ENST00000420910.7 | protein_coding | 12/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LMLN_chr3_197955217_198048720 | 198004661 | ACATCTAT others(357): Show |
A | intron_variant | MODIFIER | HG00558.hp1 HG00621.hp1 HG01243.hp2 others(16): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0001t0013a0001c0001t0015others(3): Show | a0001c0001t0001g0138a0001c0001t0001g0156a0001c0001t0001g0160others(16): Show | 19 | 258 | 0.0736 | -364 | c.131 others(19): Show |
LMLN | ENSG00000185621.11 | transcript | ENST00000420910.7 | protein_coding | 12/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LOC102723971_chr9_135609183_135624893 | 135619859 | TCTCCCCC others(357): Show |
T | splice_region_variant | LOW | NA18989.hp2 | a0001 | a0001c0001 | a0001c0001t0025 | a0001c0001t0025g0023 | 1 | 450 | 0.0022 | -364 | c.*90 others(10): Show |
LOC102723971 | ENSG00000236543.3 | transcript | ENST00000430816.3 | protein_coding | 6/6 | chr9 | TogoVar | ||||||
LOX_chr5_122058195_122083259 | 122061092 | GTTTAGCT others(357): Show |
G | downstream_gene_variant | MODIFIER | HG01433.hp1 HG02132.hp1 HG02165.hp2 others(14): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0003 | a0001c0001t0003a0002c0002t0018a0002c0003t0003 | a0001c0001t0003g0026a0002c0002t0018g0048a0002c0003t0003g0007others(2): Show | 17 | 324 | 0.0525 | -364 | c.*52 others(11): Show |
LOX | ENSG00000113083.15 | transcript | ENST00000231004.5 | protein_coding | 2102 | chr5 | TogoVar | ||||||
LSG1_chr3_194635791_194677191 | 194663356 | CCCTTTCC others(357): Show |
C | intron_variant | MODIFIER | HG00673.hp1 HG00735.hp1 HG01074.hp1 others(87): Show |
a0002a0003a0004others(3): Show | a0002c0002a0002c0020a0003c0004others(5): Show | a0002c0002t0004a0002c0002t0006a0002c0002t0010others(42): Show | a0002c0002t0004g0355a0002c0002t0004g0371a0002c0002t0004g0372others(79): Show | 90 | 408 | 0.2206 | -364 | c.521 others(17): Show |
LSG1 | ENSG00000041802.11 | transcript | ENST00000265245.10 | protein_coding | 5/13 | chr3 | TogoVar | ||||||
LSG1_chr3_194635791_194677191 | 194663427 | CGCCTCAG others(357): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG03225.hp1 HG03540.hp1 others(1): Show |
a0002 | a0002c0006 | a0002c0006t0061a0002c0006t0063a0002c0006t0077others(1): Show | a0002c0006t0061g0067a0002c0006t0063g0065a0002c0006t0077g0066others(1): Show | 4 | 408 | 0.0098 | -364 | c.521 others(17): Show |
LSG1 | ENSG00000041802.11 | transcript | ENST00000265245.10 | protein_coding | 5/13 | chr3 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241805638 | TCCCCCCT others(357): Show |
T | upstream_gene_variant | MODIFIER | HG02004.hp2 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0019 | 1 | 319 | 0.0031 | -364 | c.-36 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 3554 | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241805676 | CCCCTCAG others(357): Show |
C | upstream_gene_variant | MODIFIER | homoSapiens_chm13v2.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0002 | 1 | 319 | 0.0031 | -364 | c.-36 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 3516 | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241805898 | CTCCCTCC others(357): Show |
C | upstream_gene_variant | MODIFIER | NA19066.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0123 | 1 | 319 | 0.0031 | -364 | c.-33 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 3294 | chr2 | TogoVar | ||||||
OR6B3_chr2_240039571_240058521 | 240042299 | GGAAGGGC others(357): Show |
G | downstream_gene_variant | MODIFIER | HG02965.hp2 HG03486.hp2 |
a0004 | a0004c0009 | a0004c0009t0001 | a0004c0009t0001g0096a0004c0009t0001g0127 | 2 | 444 | 0.0045 | -364 | c.*24 others(11): Show |
OR6B3 | ENSG00000178586.7 | transcript | ENST00000641019.2 | protein_coding | 2271 | chr2 | TogoVar |