view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PSG6_chr19_42897086_42922894 | 42919317 | GTCACGAG others(3570): Show |
G | upstream_gene_variant | MODIFIER | HG02723.hp1 | a0006 | a0006c0020 | a0006c0020t0003 | a0006c0020t0003g0102 | 1 | 406 | 0.0025 | -3577 | c.-51 others(11): Show |
PSG6 | ENSG00000170848.16 | transcript | ENST00000187910.7 | protein_coding | 1424 | chr19 | TogoVar | |||||||
CSTPP1_chr11_46931761_47167247 | 46987838 | ATATAAGG others(3568): Show |
A | intron_variant | MODIFIER | NA18983.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0162 | 1 | 222 | 0.0045 | -3575 | c.149 others(16): Show |
CSTPP1 | ENSG00000149179.14 | transcript | ENST00000278460.12 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
STAT4_chr2_191024576_191155994 | 191130357 | GGACTACA others(3565): Show |
G | intron_variant | MODIFIER | HG01192.hp1 HG01981.hp2 HG02258.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0021 a0001c0001t0001g0116 a0001c0001t0001g0244 others(4): Show |
7 | 288 | 0.0243 | -3572 | c.273 others(19): Show |
STAT4 | ENSG00000138378.19 | transcript | ENST00000392320.7 | protein_coding | 3/23 | chr2 | TogoVar | |||||||
OR7G2_chr19_9095407_9112475 | 9105819 | CCTGGGTG others(3564): Show |
C | splice_donor_variant others(4): Show |
HIGH | HG01192.hp2 | a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0039 | 1 | 442 | 0.0023 | -3571 | c.-20 others(14): Show |
OR7G2 | ENSG00000170923.4 | transcript | ENST00000641081.1 | protein_coding | 1/2 | chr19 | TogoVar | |||||||
PPP3CA_chr4_101018418_101352526 | 101160048 | GGTGACAA others(3551): Show |
G | intron_variant | MODIFIER | HG02486.hp1 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0035 | 1 | 190 | 0.0053 | -3558 | c.259 others(19): Show |
PPP3CA | ENSG00000138814.17 | transcript | ENST00000394854.8 | protein_coding | 2/13 | chr4 | TogoVar | |||||||
SERF1B_chr5_70020251_70048113 | 70042283 | GTTTCACC others(3551): Show |
G | splice_region_variant | LOW | HG01167.hp1 HG02145.hp2 HG02258.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0034 a0001c0001t0003g0088 a0001c0001t0003g0135 others(10): Show |
13 | 218 | 0.0596 | -3558 | c.*54 others(10): Show |
SERF1B | ENSG00000205572.11 | transcript | ENST00000380750.8 | protein_coding | 3/3 | chr5 | TogoVar | |||||||
ZNF500_chr16_4743239_4772162 | 4756271 | ATCAGGAG others(3546): Show |
A | intron_variant | MODIFIER | NA18988.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0248 | 1 | 410 | 0.0024 | -3553 | c.760 others(16): Show |
ZNF500 | ENSG00000103199.14 | transcript | ENST00000219478.11 | protein_coding | 5/5 | chr16 | TogoVar | |||||||
EDAR_chr2_108889471_108994220 | 108944513 | CTGTTAAT others(3545): Show |
C | intron_variant | MODIFIER | HG03688.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0070 | 1 | 224 | 0.0045 | -3552 | c.-18 others(19): Show |
EDAR | ENSG00000135960.10 | transcript | ENST00000258443.7 | protein_coding | 1/11 | chr2 | TogoVar | |||||||
CCDC148_chr2_158166073_158461753 | 158302722 | TGCAGTGA others(3544): Show |
T | intron_variant | MODIFIER | HG02922.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0246 | 1 | 262 | 0.0038 | -3551 | c.111 others(19): Show |
CCDC148 | ENSG00000153237.19 | transcript | ENST00000283233.10 | protein_coding | 9/13 | chr2 | TogoVar | |||||||
DHRSX_chrX_2214506_2505976 | 2277277 | AGGGAGAG others(3540): Show |
A | intron_variant | MODIFIER | NA18747.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0039 | 1 | 48 | 0.0208 | -3547 | c.388 others(19): Show |
DHRSX | ENSG00000169084.15 | transcript | ENST00000334651.11 | protein_coding | 4/6 | chrX | TogoVar | |||||||
CPZ_chr4_8587765_8624752 | 8621207 | AGTTTACA others(3538): Show |
A | downstream_gene_variant | MODIFIER | HG01891.hp2 HG02615.hp1 HG02622.hp2 others(1): Show |
a0004 | a0004c0002a0004c0017 | a0004c0002t0002a0004c0017t0002 | a0004c0002t0002g0175 a0004c0002t0002g0177 a0004c0002t0002g0189 others(1): Show |
4 | 194 | 0.0206 | -3545 | c.*15 others(11): Show |
CPZ | ENSG00000109625.19 | transcript | ENST00000360986.9 | protein_coding | 1456 | chr4 | TogoVar | |||||||
CYB5A_chr18_74245846_74296963 | 74264889 | TCTCAGAG others(3537): Show |
T | intron_variant | MODIFIER | HG02015.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0301 | 1 | 394 | 0.0025 | -3544 | c.130 others(17): Show |
CYB5A | ENSG00000166347.19 | transcript | ENST00000340533.9 | protein_coding | 1/4 | chr18 | TogoVar | |||||||
KAZN_chr1_14593685_15123043 | 15013582 | CGTCTCTA others(3537): Show |
C | intron_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0125 | 1 | 146 | 0.0068 | -3544 | c.419 others(19): Show |
KAZN | ENSG00000189337.17 | transcript | ENST00000376030.7 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
PTDSS1_chr8_96256902_96341995 | 96336018 | TTTTCCCT others(3536): Show |
T | splice_region_variant | LOW | HG01070.hp1 HG02886.hp1 HG03130.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0050 a0001c0001t0009g0061 a0001c0001t0009g0062 others(1): Show |
4 | 260 | 0.0154 | -3543 | c.*24 others(11): Show |
PTDSS1 | ENSG00000156471.13 | transcript | ENST00000517309.6 | protein_coding | 13/13 | chr8 | TogoVar | |||||||
SHC4_chr15_48818741_48968919 | 48892129 | ACAGGCGT others(3536): Show |
A | intron_variant | MODIFIER | NA18939.hp2 NA18945.hp2 NA18946.hp1 others(8): Show |
a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0105 a0001c0002t0004g0218 a0001c0002t0004g0221 others(8): Show |
11 | 382 | 0.0288 | -3543 | c.657 others(17): Show |
SHC4 | ENSG00000185634.12 | transcript | ENST00000332408.9 | protein_coding | 2/11 | chr15 | TogoVar | |||||||
ACSM1_chr16_20618235_20702680 | 20698233 | ACCTCCAA others(3531): Show |
A | upstream_gene_variant | MODIFIER | HG03704.hp2 HG03927.hp1 |
a0001 | a0001c0008 | a0001c0008t0003 | a0001c0008t0003g0096 a0001c0008t0003g0257 |
2 | 316 | 0.0063 | -3538 | c.-41 others(10): Show |
ACSM1 | ENSG00000166743.10 | transcript | ENST00000520010.6 | protein_coding | 554 | chr16 | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110695373 | TCTGGTAC others(3531): Show |
T | intron_variant | MODIFIER | HG02145.hp1 HG06807.hp2 |
a0001 | a0001c0002 | a0001c0002t0006a0001c0002t0039 | a0001c0002t0006g0042 a0001c0002t0039g0041 |
2 | 170 | 0.0118 | -3538 | c.609 others(17): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 7/11 | chrX | TogoVar | |||||||
ASMT_chrX_1610059_1648081 | 1637229 | ACACAGCC others(3530): Show |
A | intron_variant | MODIFIER | HG01346.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0097 | 1 | 218 | 0.0046 | -3537 | c.910 others(16): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
ADAM12_chr10_126007391_126393477 | 126348596 | TACGTCCA others(3528): Show |
T | intron_variant | MODIFIER | HG03490.hp2 | a0001 | a0001c0008 | a0001c0008t0001 | a0001c0008t0001g0105 | 1 | 250 | 0.0040 | -3535 | c.89- others(17): Show |
ADAM12 | ENSG00000148848.15 | transcript | ENST00000448723.2 | protein_coding | 1/22 | chr10 | TogoVar | |||||||
LMNTD1_chr12_25471082_25558283 | 25481036 | AGTTATAC others(3520): Show |
A | intron_variant | MODIFIER | HG02109.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0142 | 1 | 386 | 0.0026 | -3527 | c.*23 others(17): Show |
LMNTD1 | ENSG00000152936.11 | transcript | ENST00000458174.7 | protein_coding | 9/9 | chr12 | TogoVar | |||||||
MBD3L5_chr19_7025578_7038011 | 7034485 | TATATATA others(3519): Show |
T | downstream_gene_variant | MODIFIER | NA19060.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 248 | 0.0040 | -3526 | c.*15 others(11): Show |
MBD3L5 | ENSG00000237247.6 | transcript | ENST00000329753.5 | protein_coding | 1475 | chr19 | TogoVar | |||||||
C7orf50_chr7_992006_1143247 | 1036677 | TAAAAAAA others(3512): Show |
T | intron_variant | MODIFIER | HG00741.hp1 HG01071.hp2 HG01074.hp2 others(13): Show |
a0001a0008 | a0001c0001a0008c0007 | a0001c0001t0007a0001c0001t0010a0008c0007t0008 | a0001c0001t0007g0126 a0001c0001t0007g0131 a0001c0001t0007g0143 others(13): Show |
16 | 323 | 0.0495 | -3519 | c.130 others(19): Show |
C7orf50 | ENSG00000146540.15 | transcript | ENST00000397098.8 | protein_coding | 2/4 | chr7 | TogoVar | |||||||
PSMA8_chr18_26128869_26198355 | 26167841 | TGGTATTT others(3510): Show |
T | intron_variant | MODIFIER | HG00544.hp2 HG00609.hp2 HG00673.hp2 others(140): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0018 others(130): Show |
143 | 266 | 0.5376 | -3517 | c.477 others(17): Show |
PSMA8 | ENSG00000154611.15 | transcript | ENST00000415576.7 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
FARS2_chr6_5256513_5776583 | 5606341 | GTCACCAT others(3507): Show |
G | intron_variant | MODIFIER | HG03704.hp2 HG04115.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0024 a0002c0002t0001g0047 |
2 | 168 | 0.0119 | -3514 | c.106 others(19): Show |
FARS2 | ENSG00000145982.13 | transcript | ENST00000274680.9 | protein_coding | 5/6 | chr6 | TogoVar | |||||||
ZMYM4_chr1_35263709_35427058 | 35373636 | ACCCACCT others(3507): Show |
A | intron_variant | MODIFIER | HG03834.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0168 | 1 | 296 | 0.0034 | -3514 | c.118 others(19): Show |
ZMYM4 | ENSG00000146463.12 | transcript | ENST00000314607.11 | protein_coding | 7/29 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
TRPC6_chr11_101446564_101589007 | 101509445 | TTGTATCT others(3506): Show |
T | intron_variant | MODIFIER | HG02895.hp2 HG02897.hp1 |
a0001 | a0001c0003 | a0001c0003t0012 | a0001c0003t0012g0003 | 2 | 250 | 0.0080 | -3513 | c.171 others(17): Show |
TRPC6 | ENSG00000137672.13 | transcript | ENST00000344327.8 | protein_coding | 1/12 | chr11 | TogoVar | |||||||
PHLDB1_chr11_118602615_118663028 | 118617382 | CCACTGTC others(3502): Show |
C | intron_variant | MODIFIER | HG00558.hp2 | a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0198 | 1 | 354 | 0.0028 | -3509 | c.355 others(17): Show |
PHLDB1 | ENSG00000019144.20 | transcript | ENST00000600882.6 | protein_coding | 4/22 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SIRT4_chr12_120297321_120318249 | 120307815 | ACCATTGC others(3490): Show |
A | intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0089 | 1 | 378 | 0.0026 | -3497 | c.497 others(17): Show |
SIRT4 | ENSG00000089163.4 | transcript | ENST00000202967.4 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SPATA31C2_chr9_88124305_88143475 | 88137247 | GGTTCAAT others(3487): Show |
G | exon_loss_variant others(1): Show |
HIGH | HG01346.hp1 HG02004.hp1 |
a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0001 a0002c0001t0001g0033 |
2 | 442 | 0.0045 | -3494 | c.-22 others(14): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | |||||||
NEK1_chr4_169387809_169617583 | 169441694 | CTGCTAGT others(3486): Show |
C | intron_variant | MODIFIER | HG01192.hp2 HG01981.hp1 |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0085 a0002c0002t0003g0091 |
2 | 258 | 0.0078 | -3493 | c.258 others(19): Show |
NEK1 | ENSG00000137601.18 | transcript | ENST00000507142.6 | protein_coding | 27/35 | chr4 | TogoVar | |||||||
BRSK2_chr11_1384934_1467689 | 1429523 | GCTGTGCC others(3485): Show |
G | intron_variant | MODIFIER | HG01433.hp2 | a0002 | a0002c0016 | a0002c0016t0052 | a0002c0016t0052g0010 | 1 | 279 | 0.0036 | -3492 | c.92- others(15): Show |
BRSK2 | ENSG00000174672.16 | transcript | ENST00000528841.6 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPATA31C2_chr9_88124305_88143475 | 88135895 | AATTTTAT others(3485): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG01192.hp2 NA19002.hp2 |
a0002 | a0002c0001 | a0002c0001t0001a0002c0001t0005 | a0002c0001t0001g0007 a0002c0001t0005g0126 |
2 | 382 | 0.0052 | -3492 | c.-94 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | |||||||
SPATA31C2_chr9_88124305_88143475 | 88134448 | ACAGAGAC others(3483): Show |
A | intron_variant | MODIFIER | HG00544.hp1 HG01516.hp1 HG02145.hp2 others(2): Show |
a0002a0004 | a0002c0001a0004c0005 | a0002c0001t0001a0004c0005t0001 | a0002c0001t0001g0057 a0002c0001t0001g0101 a0002c0001t0001g0130 others(1): Show |
5 | 358 | 0.0140 | -3490 | c.189 others(15): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/3 | chr9 | TogoVar | |||||||
SPATA31C2_chr9_88124305_88143475 | 88135166 | TTCCTTCG others(3483): Show |
T | exon_loss_variant others(1): Show |
HIGH | HG02738.hp2 NA18955.hp1 |
a0002a0029 | a0002c0001a0029c0055 | a0002c0001t0001a0029c0055t0001 | a0002c0001t0001g0007 a0029c0055t0001g0115 |
2 | 137 | 0.0146 | -3490 | c.-21 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | |||||||
SPATA31C2_chr9_88124305_88143475 | 88135258 | ATTGGAGT others(3483): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00099.hp2 HG01070.hp1 HG01123.hp2 others(8): Show |
a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0001 a0002c0001t0001g0007 a0002c0001t0001g0033 others(2): Show |
11 | 403 | 0.0273 | -3490 | c.-30 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | |||||||
SPATA31C2_chr9_88124305_88143475 | 88135870 | TAAAATTC others(3483): Show |
T | exon_loss_variant others(1): Show |
HIGH | NA18945.hp2 NA18951.hp1 NA18953.hp1 others(1): Show |
a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0007 a0002c0001t0001g0114 |
4 | 243 | 0.0165 | -3490 | c.-91 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | |||||||
SPATA31C2_chr9_88124305_88143475 | 88136010 | TGCAACCT others(3483): Show |
T | exon_loss_variant others(1): Show |
HIGH | HG00423.hp2 HG01106.hp2 HG01928.hp1 others(12): Show |
a0006a0022 | a0006c0008a0006c0013a0022c0032 | a0006c0008t0001a0006c0008t0006a0006c0013t0001others(1): Show | a0006c0008t0001g0011 a0006c0008t0006g0011 a0006c0013t0001g0018 others(2): Show |
15 | 145 | 0.1034 | -3490 | c.-10 others(14): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | |||||||
SPATA31C2_chr9_88124305_88143475 | 88135330 | TATGTACC others(3482): Show |
T | exon_loss_variant others(1): Show |
HIGH | HG00639.hp2 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0001 | 1 | 444 | 0.0023 | -3489 | c.-37 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | |||||||
PSME4_chr2_53859069_53975993 | 53950570 | AGTGGCTC others(3481): Show |
A | intron_variant | MODIFIER | NA18973.hp2 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0194 | 1 | 382 | 0.0026 | -3488 | c.243 others(17): Show |
PSME4 | ENSG00000068878.15 | transcript | ENST00000404125.6 | protein_coding | 1/46 | chr2 | TogoVar | |||||||
KCNT1_chr9_135697185_135800502 | 135796621 | AGGAAGAG others(3480): Show |
A | downstream_gene_variant | MODIFIER | HG02280.hp2 HG02922.hp2 NA18522.hp2 |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0008a0001c0003t0008a0001c0004t0008 | a0001c0001t0008g0008 a0001c0003t0008g0043 a0001c0004t0008g0203 |
3 | 270 | 0.0111 | -3487 | c.*44 others(11): Show |
KCNT1 | ENSG00000107147.14 | transcript | ENST00000371757.7 | protein_coding | 1120 | chr9 | TogoVar | |||||||
GAS6_chr13_113815549_113869076 | 113842203 | CAGTTTCC others(3479): Show |
C | intron_variant | MODIFIER | HG00639.hp1 HG02922.hp1 HG03098.hp1 others(2): Show |
a0001 | a0001c0001a0001c0007a0001c0016 | a0001c0001t0004a0001c0007t0001a0001c0016t0001 | a0001c0001t0004g0141 a0001c0001t0004g0142 a0001c0007t0001g0127 others(2): Show |
5 | 142 | 0.0352 | -3486 | c.343 others(16): Show |
GAS6 | ENSG00000183087.15 | transcript | ENST00000327773.7 | protein_coding | 4/14 | chr13 | TogoVar | |||||||
ARHGEF4_chr2_130831914_131052253 | 130857798 | TTTTATTT others(3478): Show |
T | intron_variant | MODIFIER | HG02647.hp2 HG02922.hp2 HG02970.hp1 |
a0001 | a0001c0012a0001c0018 | a0001c0012t0002a0001c0018t0002a0001c0018t0005 | a0001c0012t0002g0075 a0001c0018t0002g0105 a0001c0018t0005g0106 |
3 | 142 | 0.0211 | -3485 | c.39+ others(17): Show |
ARHGEF4 | ENSG00000136002.21 | transcript | ENST00000409359.7 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
KDELR2_chr7_6456089_6489152 | 6456510 | ACACACAT others(3477): Show |
A | downstream_gene_variant | MODIFIER | NA18968.hp1 NA18973.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0084 |
2 | 418 | 0.0048 | -3484 | c.*31 others(11): Show |
KDELR2 | ENSG00000136240.10 | transcript | ENST00000258739.9 | protein_coding | 4578 | chr7 | TogoVar | |||||||
RFPL4A_chr19_55754097_55768421 | 55764937 | TTTTTGTT others(3477): Show |
T | downstream_gene_variant | MODIFIER | HG00323.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 451 | 0.0022 | -3484 | c.*17 others(11): Show |
RFPL4A | ENSG00000223638.4 | transcript | ENST00000434937.3 | protein_coding | 1517 | chr19 | TogoVar | |||||||
AP2A2_chr11_920870_1017240 | 921426 | CCTCCCAA others(3476): Show |
C | upstream_gene_variant | MODIFIER | HG01106.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0088 | 1 | 266 | 0.0038 | -3483 | c.-45 others(11): Show |
AP2A2 | ENSG00000183020.15 | transcript | ENST00000448903.7 | protein_coding | 4443 | chr11 | TogoVar | |||||||
ARHGEF4_chr2_130831914_131052253 | 130857535 | TAAAAAAA others(3474): Show |
T | intron_variant | MODIFIER | HG01243.hp2 HG01257.hp2 HG01258.hp1 others(13): Show |
a0001a0004a0006others(1): Show | a0001c0007a0004c0006a0004c0008others(2): Show | a0001c0007t0004a0004c0006t0001a0004c0006t0002others(4): Show | a0001c0007t0004g0089 a0001c0007t0004g0090 a0001c0007t0004g0091 others(13): Show |
16 | 72 | 0.2222 | -3481 | c.39+ others(17): Show |
ARHGEF4 | ENSG00000136002.21 | transcript | ENST00000409359.7 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ARHGEF4_chr2_130831914_131052253 | 130857213 | CAGAGCGA others(3473): Show |
C | intron_variant | MODIFIER | HG03453.hp1 | a0002 | a0002c0027 | a0002c0027t0001 | a0002c0027t0001g0073 | 1 | 142 | 0.0070 | -3480 | c.39+ others(17): Show |
ARHGEF4 | ENSG00000136002.21 | transcript | ENST00000409359.7 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ARHGEF4_chr2_130831914_131052253 | 130857535 | TAAAAAAA others(3472): Show |
T | intron_variant | MODIFIER | HG01884.hp2 HG02258.hp2 HG02280.hp1 others(6): Show |
a0001a0002a0003others(2): Show | a0001c0045a0002c0011a0003c0003others(3): Show | a0001c0045t0001a0002c0011t0001a0003c0003t0003others(3): Show | a0001c0045t0001g0085 a0002c0011t0001g0132 a0002c0011t0001g0133 others(6): Show |
9 | 65 | 0.1385 | -3479 | c.39+ others(17): Show |
ARHGEF4 | ENSG00000136002.21 | transcript | ENST00000409359.7 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ARHGEF4_chr2_130831914_131052253 | 130859387 | CAAAAAAA others(3470): Show |
C | intron_variant | MODIFIER | HG02615.hp2 HG02897.hp1 |
a0001a0003 | a0001c0015a0003c0029 | a0001c0015t0001a0003c0029t0004 | a0001c0015t0001g0079 a0003c0029t0004g0022 |
2 | 114 | 0.0175 | -3477 | c.39+ others(17): Show |
ARHGEF4 | ENSG00000136002.21 | transcript | ENST00000409359.7 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ARHGEF4_chr2_130831914_131052253 | 130859388 | AAAAAAAA others(3469): Show |
A | intron_variant | MODIFIER | HG00642.hp2 HG00735.hp1 HG01081.hp2 others(49): Show |
a0001a0002a0003others(14): Show | a0001c0001a0001c0002a0001c0015others(26): Show | a0001c0001t0001a0001c0002t0001a0001c0015t0001others(28): Show | a0001c0001t0001g0025 a0001c0001t0001g0046 a0001c0001t0001g0077 others(49): Show |
52 | 142 | 0.3662 | -3476 | c.39+ others(17): Show |
ARHGEF4 | ENSG00000136002.21 | transcript | ENST00000409359.7 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |