regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SORCS2_chr4_7187538_7747827 | 7255938 | CGGGGCTG others(14): Show |
C | intron_variant | MODIFIER | HG01192.hp1 HG02040.hp1 HG02293.hp2 others(4): Show |
a0001a0003a0008 | a0001c0002a0001c0006a0001c0031others(3): Show | a0001c0002t0002a0001c0002t0067a0001c0006t0066others(4): Show | a0001c0002t0002g0062a0001c0002t0067g0115a0001c0006t0066g0084others(4): Show | 7 | 168 | 0.0417 | -21 | c.480 others(40): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SORCS2_chr4_7187538_7747827 | 7356990 | TGAGCAGA others(14): Show |
T | intron_variant | MODIFIER | HG04204.hp1 | a0002 | a0002c0050 | a0002c0050t0045 | a0002c0050t0045g0132 | 1 | 168 | 0.0060 | -21 | c.481 others(40): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7522879 | TTCCCTCC others(14): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00639.hp1 HG00642.hp2 others(59): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0002a0001c0003others(31): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0010others(56): Show | a0001c0001t0003g0048a0001c0001t0003g0053a0001c0001t0004g0097others(59): Show | 62 | 168 | 0.3691 | -21 | c.549 others(38): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SORCS2_chr4_7187538_7747827 | 7565991 | AATGGTGA others(14): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(154): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0002a0001c0003others(49): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(127): Show | a0001c0001t0002g0089a0001c0001t0003g0048a0001c0001t0003g0053others(154): Show | 157 | 168 | 0.9345 | -21 | c.648 others(40): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SORCS2_chr4_7187538_7747827 | 7566037 | GTGATGAT others(14): Show |
G | intron_variant | MODIFIER | HG02970.hp1 HG06807.hp1 |
a0001 | a0001c0001a0001c0010 | a0001c0001t0068a0001c0010t0027 | a0001c0001t0068g0007a0001c0010t0027g0105 | 2 | 168 | 0.0119 | -21 | c.648 others(40): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SORCS2_chr4_7187538_7747827 | 7724262 | ATGGTGAT others(14): Show |
A | intron_variant | MODIFIER | HG02572.hp2 | a0005 | a0005c0008 | a0005c0008t0001 | a0005c0008t0001g0029 | 1 | 168 | 0.0060 | -21 | c.261 others(38): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 19/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SORCS2_chr4_7187538_7747827 | 7733991 | TGGCAGGG others(14): Show |
T | intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0036 | a0001c0036t0044 | a0001c0036t0044g0022 | 1 | 168 | 0.0060 | -21 | c.320 others(38): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 24/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SORL1_chr11_121447314_121638763 | 121586868 | TGATTTAA others(14): Show |
T | intron_variant | MODIFIER | NA18941.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0103 | 1 | 272 | 0.0037 | -21 | c.381 others(38): Show |
SORL1 | ENSG00000137642.13 | transcript | ENST00000260197.12 | protein_coding | 27/47 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
SOS2_chr14_50112130_50236578 | 50160379 | CTTTTTTT others(14): Show |
C | intron_variant | MODIFIER | NA19078.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0039 | 1 | 382 | 0.0026 | -21 | c.119 others(38): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 9/22 | chr14 | TogoVar | ||||||
SOWAHB_chr4_76889152_76903144 | 76900846 | AAAAAACA others(14): Show |
A | upstream_gene_variant | MODIFIER | HG00673.hp2 HG01109.hp1 HG01891.hp1 others(25): Show |
a0002a0003a0004 | a0002c0002a0003c0003a0004c0004others(1): Show | a0002c0002t0003a0002c0002t0008a0002c0002t0016others(4): Show | a0002c0002t0003g0000a0002c0002t0008g0000a0002c0002t0016g0000others(4): Show | 28 | 438 | 0.0639 | -21 | c.-30 others(32): Show |
SOWAHB | ENSG00000186212.4 | transcript | ENST00000334306.4 | protein_coding | 2703 | chr4 | TogoVar | ||||||
SOX11_chr2_5687384_5706385 | 5706305 | GGGGTAGA others(14): Show |
G | downstream_gene_variant | MODIFIER | NA18950.hp2 | a0001 | a0001c0001 | a0001c0001t0139 | a0001c0001t0139g0000 | 1 | 434 | 0.0023 | -21 | c.*12 others(34): Show |
SOX11 | ENSG00000176887.7 | transcript | ENST00000322002.5 | protein_coding | 4921 | chr2 | TogoVar | ||||||
SOX11_chr2_5687384_5706385 | 5706316 | GCAGGGAG others(14): Show |
G | downstream_gene_variant | MODIFIER | NA19059.hp1 | a0001 | a0001c0001 | a0001c0001t0138 | a0001c0001t0138g0000 | 1 | 434 | 0.0023 | -21 | c.*12 others(34): Show |
SOX11 | ENSG00000176887.7 | transcript | ENST00000322002.5 | protein_coding | 4932 | chr2 | TogoVar | ||||||
SOX18_chr20_64042582_64054639 | 64042791 | CGGGGTCG others(14): Show |
C | downstream_gene_variant | MODIFIER | HG00609.hp2 NA21309.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 352 | 0.0057 | -21 | c.*53 others(32): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4790 | chr20 | TogoVar | ||||||
SOX18_chr20_64042582_64054639 | 64042810 | ACGGGGGT others(14): Show |
A | downstream_gene_variant | MODIFIER | HG01168.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0004 | 1 | 352 | 0.0028 | -21 | c.*53 others(32): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4771 | chr20 | TogoVar | ||||||
SOX18_chr20_64042582_64054639 | 64042831 | GCGGGGGT others(14): Show |
G | downstream_gene_variant | MODIFIER | HG00673.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 352 | 0.0028 | -21 | c.*53 others(32): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4750 | chr20 | TogoVar | ||||||
SOX18_chr20_64042582_64054639 | 64042852 | ACGGGGGT others(14): Show |
A | downstream_gene_variant | MODIFIER | HG02056.hp1 HG02132.hp1 HG03139.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002 | 10 | 352 | 0.0284 | -21 | c.*52 others(32): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4729 | chr20 | TogoVar | ||||||
SOX18_chr20_64042582_64054639 | 64042894 | GCGGGGGT others(14): Show |
G | downstream_gene_variant | MODIFIER | HG04184.hp2 NA18948.hp2 NA18978.hp1 others(1): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0002c0004t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0002c0004t0001g0013 | 4 | 352 | 0.0114 | -21 | c.*52 others(32): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4687 | chr20 | TogoVar | ||||||
SOX18_chr20_64042582_64054639 | 64042915 | ACGGGGGT others(14): Show |
A | downstream_gene_variant | MODIFIER | NA18985.hp1 NA19060.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 352 | 0.0057 | -21 | c.*52 others(32): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4666 | chr20 | TogoVar | ||||||
SOX21_chr13_94704622_94717545 | 94711564 | GGCGGCGG others(14): Show |
G | disruptive_inframe_deletion | MODERATE | HG02056.hp2 | a0002 | a0002c0006 | a0002c0006t0002 | a0002c0006t0002g0000 | 1 | 436 | 0.0023 | -21 | c.465 others(28): Show |
p.Ala others(13): Show |
SOX21 | ENSG00000125285.6 | transcript | ENST00000376945.4 | protein_coding | 1/1 | 981/2924 | 465/831 | 155/276 | chr13 | TogoVar | ||
SOX2_chr3_181706925_181719436 | 181715433 | GTTTTTTT others(14): Show |
G | downstream_gene_variant | MODIFIER | HG00642.hp1 HG02895.hp1 HG02897.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0000a0001c0001t0004g0000 | 4 | 412 | 0.0097 | -21 | c.*21 others(32): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 998 | chr3 | TogoVar | ||||||
SOX3_chrX_140497985_140510069 | 140504329 | TGCGGCCG others(14): Show |
T | disruptive_inframe_deletion | MODERATE | HG02071.hp1 | a0007 | a0007c0008 | a0007c0008t0001 | a0007c0008t0001g0000 | 1 | 339 | 0.0030 | -21 | c.711 others(28): Show |
p.Ala others(13): Show |
SOX3 | ENSG00000134595.9 | transcript | ENST00000370536.5 | protein_coding | 1/1 | 740/2085 | 711/1341 | 237/446 | chrX | TogoVar | ||
SOX5_chr12_23524504_23954670 | 23570921 | AAAAAAAA others(14): Show |
A | intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0002 | a0001c0002t0051 | a0001c0002t0051g0070 | 1 | 212 | 0.0047 | -21 | c.134 others(40): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
SOX5_chr12_23524504_23954670 | 23570923 | AAAAAAAA others(14): Show |
A | intron_variant | MODIFIER | HG02622.hp2 HG02818.hp2 HG02895.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0121a0001c0001t0003g0153a0001c0001t0004g0209 | 3 | 212 | 0.0142 | -21 | c.134 others(40): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
SOX5_chr12_23524504_23954670 | 23570925 | AAAAAAAT others(14): Show |
A | intron_variant | MODIFIER | NA18944.hp2 NA19088.hp1 |
a0001 | a0001c0002 | a0001c0002t0006 | a0001c0002t0006g0019a0001c0002t0006g0061 | 2 | 212 | 0.0094 | -21 | c.134 others(40): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
SOX5_chr12_23524504_23954670 | 23570927 | AAAAATAT others(14): Show |
A | intron_variant | MODIFIER | HG04115.hp1 | a0001 | a0001c0002 | a0001c0002t0050 | a0001c0002t0050g0212 | 1 | 212 | 0.0047 | -21 | c.134 others(40): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
SOX5_chr12_23524504_23954670 | 23570929 | AAATATAT others(14): Show |
A | intron_variant | MODIFIER | HG01106.hp2 HG02723.hp2 HG02886.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0077a0001c0001t0093others(1): Show | a0001c0001t0013g0177a0001c0001t0077g0052a0001c0001t0093g0192others(1): Show | 4 | 212 | 0.0189 | -21 | c.134 others(40): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
SOX5_chr12_23524504_23954670 | 23570931 | ATATATAT others(14): Show |
A | intron_variant | MODIFIER | HG00735.hp1 HG01261.hp1 HG02976.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0015a0001c0001t0026a0001c0001t0031others(6): Show | a0001c0001t0015g0091a0001c0001t0026g0012a0001c0001t0031g0031others(6): Show | 9 | 212 | 0.0425 | -21 | c.134 others(40): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
SOX5_chr12_23524504_23954670 | 23837230 | ATATATTT others(14): Show |
A | intron_variant | MODIFIER | HG00597.hp1 HG01243.hp2 HG01496.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0009a0001c0001t0017others(2): Show | a0001c0001t0001g0150a0001c0001t0009g0053a0001c0001t0017g0151others(2): Show | 5 | 212 | 0.0236 | -21 | c.481 others(38): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | ||||||
SOX6_chr11_15961449_16361546 | 16132394 | GAAAGAAA others(14): Show |
G | intron_variant | MODIFIER | HG02083.hp1 HG02083.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0001 | a0001c0001t0002g0076a0001c0002t0001g0150 | 2 | 218 | 0.0092 | -21 | c.778 others(40): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | ||||||
SOX6_chr11_15961449_16361546 | 16132398 | GAAAAAAG others(14): Show |
G | intron_variant | MODIFIER | NA18968.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0082 | 1 | 218 | 0.0046 | -21 | c.778 others(40): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | ||||||
SOX6_chr11_15961449_16361546 | 16146908 | CTGTAAAC others(14): Show |
C | intron_variant | MODIFIER | NA18968.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0082 | 1 | 218 | 0.0046 | -21 | c.778 others(40): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | ||||||
SOX6_chr11_15961449_16361546 | 16198025 | CTGTTGTT others(14): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00544.hp1 HG00597.hp1 others(140): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0167a0001c0001t0001g0168a0001c0001t0002g0051others(140): Show | 143 | 218 | 0.6560 | -21 | c.536 others(40): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 4/15 | chr11 | TogoVar | ||||||
SOX6_chr11_15961449_16361546 | 16226314 | GTGTTTTT others(14): Show |
G | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00544.hp2 others(102): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(31): Show | a0001c0001t0001g0043a0001c0001t0001g0176a0001c0001t0001g0204others(102): Show | 105 | 218 | 0.4817 | -21 | c.535 others(38): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 4/15 | chr11 | TogoVar | ||||||
SOX8_chr16_976770_991979 | 977430 | GCCCAGCC others(14): Show |
G | upstream_gene_variant | MODIFIER | NA19057.hp1 | a0006 | a0006c0020 | a0006c0020t0001 | a0006c0020t0001g0001 | 1 | 434 | 0.0023 | -21 | c.-44 others(32): Show |
SOX8 | ENSG00000005513.11 | transcript | ENST00000293894.4 | protein_coding | 4339 | chr16 | TogoVar | ||||||
SOX9_chr17_72116020_72131416 | 72123958 | ACAGCAGC others(14): Show |
A | disruptive_inframe_deletion | MODERATE | HG01981.hp2 HG02004.hp1 |
a0002 | a0002c0007 | a0002c0007t0001 | a0002c0007t0001g0002 | 2 | 402 | 0.0050 | -21 | c.111 others(30): Show |
p.Ala others(13): Show |
SOX9 | ENSG00000125398.8 | transcript | ENST00000245479.3 | protein_coding | 3/3 | 1482/3931 | 1110/1530 | 370/509 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
SP100_chr2_230411201_230550606 | 230460592 | CTTTTTTT others(14): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00558.hp1 others(23): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0002c0005others(3): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0015others(6): Show | a0001c0001t0002g0147a0001c0001t0004g0097a0001c0001t0015g0148others(23): Show | 26 | 290 | 0.0897 | -21 | c.821 others(36): Show |
SP100 | ENSG00000067066.17 | transcript | ENST00000340126.9 | protein_coding | 8/28 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SP100_chr2_230411201_230550606 | 230510473 | CTTTTTTT others(14): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00408.hp1 others(38): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0009others(4): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0010others(11): Show | a0001c0001t0002g0007a0001c0001t0002g0008a0001c0001t0002g0025others(38): Show | 41 | 290 | 0.1414 | -21 | c.205 others(38): Show |
SP100 | ENSG00000067066.17 | transcript | ENST00000340126.9 | protein_coding | 23/28 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SP140L_chr2_230322193_230408732 | 230349406 | ATTTGGAA others(14): Show |
A | intron_variant | MODIFIER | NA18970.hp2 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0219 | 1 | 336 | 0.0030 | -21 | c.108 others(38): Show |
SP140L | ENSG00000185404.17 | transcript | ENST00000415673.7 | protein_coding | 2/18 | chr2 | TogoVar | ||||||
SP4_chr7_21423083_21519822 | 21440868 | ACAACAAC others(14): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(338): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0009others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(57): Show | a0001c0001t0001g0007a0001c0001t0001g0008a0001c0001t0001g0009others(325): Show | 341 | 426 | 0.8005 | -21 | c.167 others(42): Show |
SP4 | ENSG00000105866.15 | transcript | ENST00000222584.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
SP8_chr7_20777279_20791886 | 20790841 | CAAAAAAA others(14): Show |
C | upstream_gene_variant | MODIFIER | HG02895.hp1 NA18963.hp2 NA18986.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0035 | 5 | 416 | 0.0120 | -21 | c.-40 others(32): Show |
SP8 | ENSG00000164651.18 | transcript | ENST00000418710.3 | protein_coding | 3956 | chr7 | TogoVar | ||||||
SP8_chr7_20777279_20791886 | 20790861 | AAAAAAAA others(14): Show |
A | upstream_gene_variant | MODIFIER | NA18955.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0002 | 1 | 416 | 0.0024 | -21 | c.-40 others(32): Show |
SP8 | ENSG00000164651.18 | transcript | ENST00000418710.3 | protein_coding | 3976 | chr7 | TogoVar | ||||||
SP8_chr7_20777279_20791886 | 20790863 | AAAAAAAA others(14): Show |
A | upstream_gene_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00544.hp1 others(51): Show |
a0001 | a0001c0002a0001c0005 | a0001c0002t0002a0001c0002t0004a0001c0002t0005others(4): Show | a0001c0002t0002g0002a0001c0002t0004g0005a0001c0002t0005g0006others(4): Show | 54 | 416 | 0.1298 | -21 | c.-40 others(32): Show |
SP8 | ENSG00000164651.18 | transcript | ENST00000418710.3 | protein_coding | 3978 | chr7 | TogoVar | ||||||
SPACA4_chr19_48601742_48612714 | 48602705 | ATATATAT others(14): Show |
A | upstream_gene_variant | MODIFIER | HG01261.hp1 HG01346.hp1 HG02572.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 3 | 392 | 0.0077 | -21 | c.-42 others(32): Show |
SPACA4 | ENSG00000177202.3 | transcript | ENST00000321762.3 | protein_coding | 4036 | chr19 | TogoVar | ||||||
SPACA7_chr13_112371355_112439689 | 112383115 | GAAAAGAA others(14): Show |
G | intron_variant | MODIFIER | NA19076.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0146 | 1 | 391 | 0.0026 | -21 | c.94+ others(36): Show |
SPACA7 | ENSG00000153498.12 | transcript | ENST00000283550.8 | protein_coding | 1/6 | chr13 | TogoVar | ||||||
SPACA7_chr13_112371355_112439689 | 112383116 | AAAAGAAA others(14): Show |
A | intron_variant | MODIFIER | HG00597.hp2 HG00609.hp2 HG01069.hp1 others(26): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0098a0001c0001t0001g0102a0001c0001t0001g0103others(26): Show | 29 | 391 | 0.0742 | -21 | c.94+ others(36): Show |
SPACA7 | ENSG00000153498.12 | transcript | ENST00000283550.8 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SPAG16_chr2_213279464_214415501 | 213342327 | GTGTATAT others(14): Show |
G | intron_variant | MODIFIER | HG00735.hp2 HG01496.hp1 HG02109.hp2 others(15): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(3): Show | a0001c0001t0001g0016a0001c0001t0001g0025a0001c0001t0001g0027others(15): Show | 18 | 86 | 0.2093 | -21 | c.644 others(38): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPAG16_chr2_213279464_214415501 | 213859178 | CAAAAAAA others(14): Show |
C | intron_variant | MODIFIER | HG02717.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 1 | 86 | 0.0116 | -21 | c.107 others(40): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPAG16_chr2_213279464_214415501 | 214126039 | CTTCCTTC others(14): Show |
C | intron_variant | MODIFIER | HG01496.hp2 NA18522.hp2 NA19086.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0001 | a0001c0001t0001g0040a0001c0001t0002g0009a0002c0002t0001g0053 | 3 | 86 | 0.0349 | -21 | c.159 others(42): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 14/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPAG1_chr8_100153587_100246904 | 100206017 | CAAAAAAA others(14): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00408.hp1 others(157): Show |
a0001a0002a0005others(3): Show | a0001c0002a0001c0003a0001c0008others(11): Show | a0001c0002t0001a0001c0002t0007a0001c0003t0001others(16): Show | a0001c0002t0001g0001a0001c0002t0001g0002a0001c0002t0001g0083others(153): Show | 160 | 366 | 0.4372 | -21 | c.109 others(40): Show |
SPAG1 | ENSG00000104450.13 | transcript | ENST00000388798.7 | protein_coding | 10/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
SPARCL1_chr4_87468335_87534376 | 87486888 | CTTTTTTT others(14): Show |
C | intron_variant | MODIFIER | NA21309.hp1 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0068 | 1 | 390 | 0.0026 | -21 | c.153 others(40): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 7/10 | chr4 | TogoVar |