Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
GMPR_chr6_16233587_16300549	16263591	ATGCAGAG others(14): Show ATGCAGAGATAAGAGGTCGGGT	A A	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	344	0.0029	-21	c.465 others(38): Show c.465+8877_465+8897delTTGCAGAGATAAGAGGTCGGG		GMPR	ENSG00000137198.10	transcript	ENST00000259727.5	protein_coding	4/8					INFO_REALIGN_3_PRIME	chr6	TogoVar
GNA13_chr17_65004289_65061740	65018092	TAAAAAAA others(14): Show TAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01884.hp1 HG02109.hp1 others(15): Show HG01099.hp1 HG01884.hp1 HG02109.hp1 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG03139.hp2 HG03225.hp2 HG03453.hp2 HG03471.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0018 a0001c0001t0023 a0001c0001t0024	a0001c0001t0001g0064 a0001c0001t0003g0001 a0001c0001t0003g0126 others(13): Show a0001c0001t0001g0064 a0001c0001t0003g0001 a0001c0001t0003g0126 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0003g0130 a0001c0001t0003g0131 a0001c0001t0003g0132 a0001c0001t0003g0133 a0001c0001t0003g0136 a0001c0001t0003g0159 a0001c0001t0003g0160 a0001c0001t0009g0154 a0001c0001t0018g0135 a0001c0001t0023g0129 a0001c0001t0024g0134	18	180	0.1000	-21	c.561 others(36): Show c.561+140_561+160delTTTTTTTTTTTTTTTTTTTTT		GNA13	ENSG00000120063.10	transcript	ENST00000439174.7	protein_coding	3/3						chr17	TogoVar
GNA14_chr9_77418079_77653322	77567813	GCCAAGAT others(14): Show GCCAAGATTGCACCACTGTACT	G G	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01169.hp2 HG02109.hp2 others(17): Show HG01074.hp1 HG01169.hp2 HG02109.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02965.hp2 HG02970.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2 HG03579.hp1 HG06807.hp1 HG06807.hp2 NA19030.hp2 NA19043.hp1 NA21309.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0005 others(5): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0008 a0001c0010 a0001c0015 a0005c0013	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(10): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0001t0013 a0001c0002t0001 a0001c0002t0002 a0001c0005t0011 a0001c0005t0014 a0001c0006t0001 a0001c0008t0001 a0001c0010t0001 a0001c0015t0010 a0005c0013t0001	a0001c0001t0001g0029 a0001c0001t0001g0069 a0001c0001t0001g0126 others(17): Show a0001c0001t0001g0029 a0001c0001t0001g0069 a0001c0001t0001g0126 a0001c0001t0001g0130 a0001c0001t0008g0190 a0001c0001t0009g0154 a0001c0001t0013g0138 a0001c0002t0001g0124 a0001c0002t0001g0135 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0002t0002g0221 a0001c0005t0011g0160 a0001c0005t0014g0238 a0001c0006t0001g0144 a0001c0008t0001g0132 a0001c0008t0001g0133 a0001c0010t0001g0026 a0001c0015t0010g0139 a0005c0013t0001g0085	20	240	0.0833	-21	c.125 others(40): Show c.125-38581_125-38561delAGTACAGTGGTGCAATCTTGG		GNA14	ENSG00000156049.7	transcript	ENST00000341700.7	protein_coding	1/6						chr9	TogoVar
GNA14_chr9_77418079_77653322	77623216	CAAAAAAA others(14): Show CAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03579.hp2 NA19043.hp1 HG02809.hp2 HG03579.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0002 a0001c0002t0001 a0001c0005t0015 a0001c0001t0002 a0001c0002t0001 a0001c0005t0015	a0001c0001t0002g0233 a0001c0002t0001g0124 a0001c0005t0015g0141 a0001c0001t0002g0233 a0001c0002t0001g0124 a0001c0005t0015g0141	3	240	0.0125	-21	c.124 others(40): Show c.124+24433_124+24453delTTTTTTTTTTTTTTTTTTTTT		GNA14	ENSG00000156049.7	transcript	ENST00000341700.7	protein_coding	1/6						chr9	TogoVar
GNA15_chr19_3131033_3168749	3135844	ATATATAT others(14): Show ATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0010 a0001c0007t0010	a0001c0007t0010g0385 a0001c0007t0010g0385	1	450	0.0022	-21	c.-60 others(30): Show c.-606_-586delTATATATATATATATATATAT		GNA15	ENSG00000060558.4	transcript	ENST00000262958.4	protein_coding					188		chr19	TogoVar
GNAI1_chr7_80129831_80231181	80159901	AGATATAT others(14): Show AGATATATGTTAAGTGTATTGG	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00438.hp1 others(90): Show HG00140.hp1 HG00280.hp1 HG00438.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01081.hp2 HG01109.hp2 HG01243.hp1 HG01255.hp2 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01891.hp2 HG01993.hp1 HG02055.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02135.hp2 HG02145.hp1 HG02155.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG04184.hp1 HG04204.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18955.hp1 NA18963.hp1 NA18992.hp1 NA18992.hp2 NA18995.hp2 NA19002.hp2 NA19043.hp1 NA19043.hp2 NA19077.hp2 NA19086.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0009	a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 others(52): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0018 a0001c0001t0032 a0001c0001t0036 a0001c0001t0039 a0001c0001t0040 a0001c0001t0046 a0001c0001t0061 a0001c0001t0063 a0001c0001t0064 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0001t0083 a0001c0001t0085 a0001c0001t0093 a0001c0001t0097 a0001c0001t0109 a0001c0001t0110 a0001c0001t0113 a0001c0001t0116 a0001c0001t0121 a0001c0001t0122 a0001c0001t0123 a0001c0001t0126 a0001c0001t0132 a0001c0002t0137 a0001c0003t0004 a0001c0003t0025 a0001c0003t0026 a0001c0003t0115 a0001c0003t0117 a0001c0003t0118 a0001c0003t0119 a0001c0003t0120 a0001c0003t0125 a0001c0004t0012 a0001c0004t0013 a0001c0004t0041 a0001c0004t0124 a0001c0004t0128 a0001c0005t0042 a0001c0005t0043 a0001c0005t0107 a0001c0005t0130 a0001c0005t0131 a0001c0005t0133 a0001c0005t0134 a0001c0007t0004 a0001c0009t0001	a0001c0001t0001g0286 a0001c0001t0006g0032 a0001c0001t0006g0221 others(89): Show a0001c0001t0001g0286 a0001c0001t0006g0032 a0001c0001t0006g0221 a0001c0001t0006g0289 a0001c0001t0006g0295 a0001c0001t0009g0257 a0001c0001t0010g0298 a0001c0001t0010g0299 a0001c0001t0010g0301 a0001c0001t0010g0302 a0001c0001t0010g0303 a0001c0001t0010g0304 a0001c0001t0011g0141 a0001c0001t0012g0256 a0001c0001t0012g0268 a0001c0001t0012g0269 a0001c0001t0018g0075 a0001c0001t0018g0132 a0001c0001t0018g0188 a0001c0001t0032g0124 a0001c0001t0032g0131 a0001c0001t0036g0307 a0001c0001t0039g0290 a0001c0001t0039g0291 a0001c0001t0040g0002 a0001c0001t0040g0237 a0001c0001t0046g0143 a0001c0001t0046g0270 a0001c0001t0061g0204 a0001c0001t0063g0128 a0001c0001t0064g0190 a0001c0001t0071g0100 a0001c0001t0072g0096 a0001c0001t0073g0095 a0001c0001t0083g0306 a0001c0001t0085g0267 a0001c0001t0093g0234 a0001c0001t0097g0002 a0001c0001t0109g0137 a0001c0001t0110g0008 a0001c0001t0113g0146 a0001c0001t0116g0140 a0001c0001t0121g0292 a0001c0001t0122g0084 a0001c0001t0123g0085 a0001c0001t0126g0285 a0001c0001t0132g0260 a0001c0002t0137g0078 a0001c0003t0004g0051 a0001c0003t0004g0150 a0001c0003t0004g0232 a0001c0003t0004g0233 a0001c0003t0004g0236 a0001c0003t0004g0238 a0001c0003t0004g0271 a0001c0003t0004g0272 a0001c0003t0004g0273 a0001c0003t0004g0274 a0001c0003t0025g0004 a0001c0003t0025g0262 a0001c0003t0026g0261 a0001c0003t0026g0263 a0001c0003t0026g0264 a0001c0003t0115g0294 a0001c0003t0117g0293 a0001c0003t0118g0215 a0001c0003t0119g0235 a0001c0003t0120g0280 a0001c0003t0125g0222 a0001c0004t0012g0142 a0001c0004t0012g0225 a0001c0004t0013g0138 a0001c0004t0013g0223 a0001c0004t0013g0228 a0001c0004t0013g0229 a0001c0004t0041g0139 a0001c0004t0041g0224 a0001c0004t0124g0144 a0001c0004t0128g0227 a0001c0005t0042g0127 a0001c0005t0042g0278 a0001c0005t0043g0136 a0001c0005t0043g0217 a0001c0005t0107g0213 a0001c0005t0130g0258 a0001c0005t0131g0181 a0001c0005t0133g0212 a0001c0005t0134g0216 a0001c0007t0004g0086 a0001c0007t0004g0087 a0001c0007t0004g0231 a0001c0009t0001g0149	93	312	0.2981	-21	c.118 others(40): Show c.118+24646_118+24666delATATATGTTAAGTGTATTGGG		GNAI1	ENSG00000127955.17	transcript	ENST00000649796.2	protein_coding	1/7					INFO_REALIGN_3_PRIME	chr7	TogoVar
GNAI2_chr3_50231204_50264362	50253196	GAGGGGCT others(14): Show GAGGGGCTGGGCAGGGCAGGGC	G G	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0115 a0001c0001t0001g0115	1	330	0.0030	-21	c.464 others(34): Show c.464+23_464+43delCAGGGCAGGGCAGGGGCTGGG		GNAI2	ENSG00000114353.17	transcript	ENST00000313601.11	protein_coding	4/8					INFO_REALIGN_3_PRIME	chr3	TogoVar
GNB5_chr15_52110100_52196392	52119425	AGGAGGAG others(14): Show AGGAGGAGGAGATGGGAGGGAG	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0111 a0001c0001t0111	a0001c0001t0111g0052 a0001c0001t0111g0052	1	366	0.0027	-21	c.33 others(32): Show c.3311_*3331delCTCCCTCCCATCTCCTCCTCC		GNB5	ENSG00000069966.19	transcript	ENST00000261837.12	protein_coding	13/13				3311		chr15	TogoVar
GNB5_chr15_52110100_52196392	52190778	TAAAAAAA others(14): Show TAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02004.hp2 NA18969.hp2 HG02004.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0150 a0001c0001t0001 a0001c0002t0150	a0001c0001t0001g0263 a0001c0002t0150g0264 a0001c0001t0001g0263 a0001c0002t0150g0264	2	366	0.0055	-21	c.-19 others(36): Show c.-19+523_-19+543delTTTTTTTTTTTTTTTTTTTTT		GNB5	ENSG00000069966.19	transcript	ENST00000261837.12	protein_coding	1/12						chr15	TogoVar
GNG7_chr19_2506219_2707694	2553528	CATGTAAC others(14): Show CATGTAACATCACATTACATAT	C C	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0057 a0001c0001t0057	a0001c0001t0057g0171 a0001c0001t0057g0171	1	206	0.0049	-21	c.-38 others(38): Show c.-38+1600_-38+1620delATATGTAATGTGATGTTACAT		GNG7	ENSG00000176533.13	transcript	ENST00000382159.8	protein_coding	3/4						chr19	TogoVar
GNG7_chr19_2506219_2707694	2657350	AAAAAAAA others(14): Show AAAAAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0086 a0001c0001t0086	a0001c0001t0086g0005 a0001c0001t0086g0005	1	206	0.0049	-21	c.-13 others(42): Show c.-134-11091_-134-11071delATATATATATTTTTTTTTTTT		GNG7	ENSG00000176533.13	transcript	ENST00000382159.8	protein_coding	1/4						chr19	TogoVar
GNG7_chr19_2506219_2707694	2657352	AAAAAAAA others(14): Show AAAAAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03209.hp1 HG01243.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0024 a0001c0001t0018 a0001c0001t0024	a0001c0001t0018g0158 a0001c0001t0024g0056 a0001c0001t0018g0158 a0001c0001t0024g0056	2	206	0.0097	-21	c.-13 others(42): Show c.-134-11093_-134-11073delATATATATATATTTTTTTTTT		GNG7	ENSG00000176533.13	transcript	ENST00000382159.8	protein_coding	1/4						chr19	TogoVar
GNG7_chr19_2506219_2707694	2657362	ATATATAT others(14): Show ATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0068 a0001c0001t0068	a0001c0001t0068g0143 a0001c0001t0068g0143	1	206	0.0049	-21	c.-13 others(42): Show c.-134-11103_-134-11083delATATATATATATATATATATA		GNG7	ENSG00000176533.13	transcript	ENST00000382159.8	protein_coding	1/4						chr19	TogoVar
GNG7_chr19_2506219_2707694	2696339	AAAGAAAG others(14): Show AAAGAAAGAAAAGAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0087 a0001c0001t0087	a0001c0001t0087g0007 a0001c0001t0087g0007	1	206	0.0049	-21	c.-13 others(40): Show c.-135+6286_-135+6306delCTTTTCTTTCTTTTCTTTCTT		GNG7	ENSG00000176533.13	transcript	ENST00000382159.8	protein_coding	1/4						chr19	TogoVar
GNL2_chr1_37561816_37600937	37595132	ATTGTCAA others(14): Show ATTGTCAAAAATTCTAAACCAT	A A	intron_variant intron_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0045	1	376	0.0027	-21	c.64+ others(34): Show c.64+606_64+626delATGGTTTAGAATTTTTGACAA		GNL2	ENSG00000134697.13	transcript	ENST00000373062.8	protein_coding	1/15						chr1	TogoVar
GOLGA3_chr12_132763914_132833869	132781909	TCAACTAA others(14): Show TCAACTAAGCAGGTCTGCCCCC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02886.hp1 HG03471.hp1 others(2): Show HG01884.hp1 HG02886.hp1 HG03471.hp1 NA18975.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0006 a0001c0003t0048 a0001c0001t0001 a0001c0003t0006 a0001c0003t0048	a0001c0001t0001g0077 a0001c0003t0006g0290 a0001c0003t0006g0291 others(2): Show a0001c0001t0001g0077 a0001c0003t0006g0290 a0001c0003t0006g0291 a0001c0003t0006g0298 a0001c0003t0048g0289	5	308	0.0162	-21	c.346 others(38): Show c.3465+366_3465+386delGGGGGCAGACCTGCTTAGTTG		GOLGA3	ENSG00000090615.16	transcript	ENST00000450791.8	protein_coding	17/23						chr12	TogoVar
GOLGA3_chr12_132763914_132833869	132807781	GGCCCCAC others(14): Show GGCCCCACCCACCTCTGCTACC	G G	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00673.hp1 HG01167.hp2 others(14): Show HG00642.hp1 HG00673.hp1 HG01167.hp2 HG01257.hp2 HG02015.hp1 HG02155.hp1 HG02293.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18939.hp2 NA18948.hp1 NA18960.hp1 NA18970.hp1 NA18975.hp2 NA18980.hp2 NA19012.hp1	a0001 a0002 a0023 a0001 a0002 a0023	a0001c0003 a0001c0009 a0002c0002 others(1): Show a0001c0003 a0001c0009 a0002c0002 a0023c0040	a0001c0003t0002 a0001c0009t0002 a0002c0002t0002 others(5): Show a0001c0003t0002 a0001c0009t0002 a0002c0002t0002 a0002c0002t0007 a0002c0002t0050 a0002c0002t0051 a0002c0002t0056 a0023c0040t0002	a0001c0003t0002g0196 a0001c0009t0002g0232 a0002c0002t0002g0002 others(14): Show a0001c0003t0002g0196 a0001c0009t0002g0232 a0002c0002t0002g0002 a0002c0002t0002g0175 a0002c0002t0002g0176 a0002c0002t0002g0177 a0002c0002t0002g0189 a0002c0002t0002g0193 a0002c0002t0002g0205 a0002c0002t0002g0207 a0002c0002t0002g0218 a0002c0002t0002g0301 a0002c0002t0007g0236 a0002c0002t0050g0237 a0002c0002t0051g0238 a0002c0002t0056g0195 a0023c0040t0002g0234	17	308	0.0552	-21	c.117 others(37): Show c.1178+89_1178+109delGGTAGCAGAGGTGGGTGGGGC		GOLGA3	ENSG00000090615.16	transcript	ENST00000450791.8	protein_coding	5/23						chr12	TogoVar
GOLGA3_chr12_132763914_132833869	132821841	GAGACTCC others(14): Show GAGACTCCGTCTCAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA19010.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0135	1	308	0.0033	-21	c.133 others(36): Show c.133+134_133+154delTTTTTTTTTGAGACGGAGTCT		GOLGA3	ENSG00000090615.16	transcript	ENST00000450791.8	protein_coding	2/23						chr12	TogoVar
GOLGA6A_chr15_74064857_74087550	74074580	TAGCCTCT others(14): Show TAGCCTCTCCTCCTTCTTCCAC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02559.hp2 HG02559.hp2	a0022 a0022	a0022c0031 a0022c0031	a0022c0031t0001 a0022c0031t0001	a0022c0031t0001g0117 a0022c0031t0001g0117	1	137	0.0073	-21	c.124 others(30): Show c.1248_1268delGTGGAAGAAGGAGGAGAGGCT	p.Trp others(13): Show p.Trp417_Leu423del	GOLGA6A	ENSG00000159289.6	transcript	ENST00000290438.3	protein_coding	11/18	1309/3176	1248/2082	416/693			chr15	TogoVar
GOLGA6L10_chr15_82334993_82354475	82344984	CAGCCTCT others(14): Show CAGCCTCTCCTCCTGTTCACAT	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	NA18522.hp2 NA18522.hp2	a0026 a0026	a0026c0028 a0026c0028	a0026c0028t0047 a0026c0028t0047	a0026c0028t0047g0045 a0026c0028t0047g0045	1	301	0.0033	-21	c.855 others(28): Show c.855_875delATGTGAACAGGAGGAGAGGCT	p.Cys others(13): Show p.Cys286_Leu292del	GOLGA6L10	ENSG00000278662.6	transcript	ENST00000610657.2	protein_coding	6/9	975/4452	855/1569	285/522			chr15	TogoVar
GOLGA6L10_chr15_82334993_82354475	82345004	ATAGCCTC others(14): Show ATAGCCTCTCCTCCTGTTCACG	A A	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG00741.hp1 HG01074.hp2 HG00741.hp1 HG01074.hp2	a0018 a0018	a0018c0021 a0018c0021	a0018c0021t0004 a0018c0021t0004	a0018c0021t0004g0022 a0018c0021t0004g0022	2	301	0.0066	-21	c.835 others(28): Show c.835_855delCGTGAACAGGAGGAGAGGCTA	p.Arg others(13): Show p.Arg279_Leu285del	GOLGA6L10	ENSG00000278662.6	transcript	ENST00000610657.2	protein_coding	6/9	955/4452	835/1569	279/522			chr15	TogoVar
GOLGA6L10_chr15_82334993_82354475	82345047	TAGCCTCT others(14): Show TAGCCTCTCCTCCTGTTCACAC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	NA18972.hp2 NA18972.hp2	a0052 a0052	a0052c0046 a0052c0046	a0052c0046t0044 a0052c0046t0044	a0052c0046t0044g0055 a0052c0046t0044g0055	1	301	0.0033	-21	c.792 others(28): Show c.792_812delGTGTGAACAGGAGGAGAGGCT	p.Cys others(13): Show p.Cys265_Leu271del	GOLGA6L10	ENSG00000278662.6	transcript	ENST00000610657.2	protein_coding	6/9	912/4452	792/1569	264/522			chr15	TogoVar
GOLGA6L10_chr15_82334993_82354475	82345131	TAGCCTCT others(14): Show TAGCCTCTCCTCCTGTTCACAC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	NA18522.hp2 NA18522.hp2	a0026 a0026	a0026c0028 a0026c0028	a0026c0028t0047 a0026c0028t0047	a0026c0028t0047g0045 a0026c0028t0047g0045	1	301	0.0033	-21	c.708 others(28): Show c.708_728delGTGTGAACAGGAGGAGAGGCT	p.Cys others(13): Show p.Cys237_Leu243del	GOLGA6L10	ENSG00000278662.6	transcript	ENST00000610657.2	protein_coding	6/9	828/4452	708/1569	236/522			chr15	TogoVar
GOLGA6L1_chr15_23122066_23141822	23129575	TTCCTGCT others(14): Show TTCCTGCTCACACATCTTCTCC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG03239.hp2 HG03239.hp2	a0053 a0053	a0053c0042 a0053c0042	a0053c0042t0001 a0053c0042t0001	a0053c0042t0001g0077 a0053c0042t0001g0077	1	204	0.0049	-21	c.185 others(30): Show c.1857_1877delGGAGAAGATGTGTGAGCAGGA	p.Glu others(13): Show p.Glu620_Glu626del	GOLGA6L1	ENSG00000273976.2	transcript	ENST00000614055.2	protein_coding	8/9	1968/3822	1857/2007	619/668			chr15	TogoVar
GOLGA6L1_chr15_23122066_23141822	23129668	CCATATCT others(14): Show CCATATCTTCTCCTCCTGCTCT	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02970.hp2 HG02970.hp2	a0048 a0048	a0048c0035 a0048c0035	a0048c0035t0003 a0048c0035t0003	a0048c0035t0003g0055 a0048c0035t0003g0055	1	204	0.0049	-21	c.176 others(30): Show c.1764_1784delAGAGCAGGAGGAGAAGATATG	p.Glu others(13): Show p.Glu589_Trp595del	GOLGA6L1	ENSG00000273976.2	transcript	ENST00000614055.2	protein_coding	8/9	1875/3822	1764/2007	588/668			chr15	TogoVar
GOLGA6L1_chr15_23122066_23141822	23129689	TCGTATCT others(14): Show TCGTATCTTCTCCTTCTGCTCC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02135.hp2 HG02135.hp2	a0029 a0029	a0029c0068 a0029c0068	a0029c0068t0001 a0029c0068t0001	a0029c0068t0001g0119 a0029c0068t0001g0119	1	204	0.0049	-21	c.174 others(30): Show c.1743_1763delGGAGCAGAAGGAGAAGATACG	p.Glu others(13): Show p.Glu582_Arg588del	GOLGA6L1	ENSG00000273976.2	transcript	ENST00000614055.2	protein_coding	8/9	1854/3822	1743/2007	581/668			chr15	TogoVar
GOLGA6L1_chr15_23122066_23141822	23129819	ATCTCCTC others(14): Show ATCTCCTCCTGCTCTCGTATCT	A A	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00621.hp2 HG00621.hp2	a0052 a0052	a0052c0040 a0052c0040	a0052c0040t0003 a0052c0040t0003	a0052c0040t0003g0064 a0052c0040t0003g0064	1	204	0.0049	-21	c.161 others(30): Show c.1613_1633delAGATACGAGAGCAGGAGGAGA	p.Lys others(13): Show p.Lys538_Glu544del	GOLGA6L1	ENSG00000273976.2	transcript	ENST00000614055.2	protein_coding	8/9	1724/3822	1613/2007	538/668			chr15	TogoVar
GOLGA6L22_chr15_22453903_22474226	22465822	GGCAGGAG others(14): Show GGCAGGAGGAGAAGATACGGGA	G G	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00738.hp1 HG01891.hp2 HG03453.hp2 HG00738.hp1 HG01891.hp2 HG03453.hp2	a0016 a0048 a0049 a0016 a0048 a0049	a0016c0068 a0048c0062 a0049c0063 a0016c0068 a0048c0062 a0049c0063	a0016c0068t0011 a0048c0062t0004 a0049c0063t0003 a0016c0068t0011 a0048c0062t0004 a0049c0063t0003	a0016c0068t0011g0056 a0048c0062t0004g0057 a0049c0063t0003g0053 a0016c0068t0011g0056 a0048c0062t0004g0057 a0049c0063t0003g0053	3	226	0.0133	-21	c.159 others(30): Show c.1595_1615delAGATACGGGAGCAGGAGGAGA	p.Lys others(13): Show p.Lys532_Glu538del	GOLGA6L22	ENSG00000277865.6	transcript	ENST00000622895.2	protein_coding	8/9	1686/4401	1595/2565	532/854		INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA6L22_chr15_22453903_22474226	22465939	AGCAGGAG others(14): Show AGCAGGAGGATAAGATGTGGAG	A A	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00408.hp1 HG00558.hp1 HG00558.hp2 others(48): Show HG00408.hp1 HG00558.hp1 HG00558.hp2 HG01361.hp1 HG01978.hp1 HG02083.hp2 HG02132.hp2 HG02273.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG03017.hp1 HG03491.hp1 HG04228.hp1 NA18522.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18953.hp1 NA18953.hp2 NA18956.hp2 NA18959.hp2 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18969.hp1 NA18973.hp1 NA18983.hp1 NA18990.hp2 NA18994.hp2 NA18997.hp2 NA19003.hp1 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp2 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19072.hp2 NA19082.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA20905.hp1	a0003 a0004 a0010 others(8): Show a0003 a0004 a0010 a0013 a0019 a0023 a0033 a0034 a0035 a0045 a0046	a0003c0003 a0003c0020 a0004c0004 others(9): Show a0003c0003 a0003c0020 a0004c0004 a0010c0015 a0013c0017 a0019c0040 a0023c0036 a0033c0045 a0034c0046 a0035c0047 a0045c0056 a0046c0060	a0003c0003t0001 a0003c0003t0005 a0003c0020t0001 others(10): Show a0003c0003t0001 a0003c0003t0005 a0003c0020t0001 a0004c0004t0001 a0010c0015t0004 a0013c0017t0001 a0019c0040t0001 a0023c0036t0001 a0033c0045t0001 a0034c0046t0001 a0035c0047t0001 a0045c0056t0012 a0046c0060t0001	a0003c0003t0001g0001 a0003c0003t0001g0003 a0003c0003t0001g0005 others(25): Show a0003c0003t0001g0001 a0003c0003t0001g0003 a0003c0003t0001g0005 a0003c0003t0001g0007 a0003c0003t0001g0027 a0003c0003t0001g0062 a0003c0003t0001g0064 a0003c0003t0005g0005 a0003c0020t0001g0001 a0003c0020t0001g0029 a0004c0004t0001g0001 a0004c0004t0001g0004 a0004c0004t0001g0008 a0004c0004t0001g0031 a0004c0004t0001g0033 a0004c0004t0001g0036 a0004c0004t0001g0039 a0010c0015t0004g0015 a0010c0015t0004g0060 a0013c0017t0001g0001 a0013c0017t0001g0045 a0019c0040t0001g0001 a0023c0036t0001g0001 a0033c0045t0001g0001 a0034c0046t0001g0008 a0035c0047t0001g0028 a0045c0056t0012g0024 a0046c0060t0001g0001	51	226	0.2257	-21	c.168 others(30): Show c.1689_1709delTAAGATGTGGAGGCAGGAGGA	p.Asp others(13): Show p.Asp563_Glu569del	GOLGA6L22	ENSG00000277865.6	transcript	ENST00000622895.2	protein_coding	8/9	1780/4401	1689/2565	563/854		INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA6L22_chr15_22453903_22474226	22466082	AGGGAGCA others(14): Show AGGGAGCAGGAGGAGAAGATAC	A A	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02155.hp2 HG02886.hp1 HG02886.hp2 others(1): Show HG02155.hp2 HG02886.hp1 HG02886.hp2 HG03041.hp2	a0000 a0041 a0051 others(1): Show a0000 a0041 a0051 a0052	a0000c0066 a0041c0054 a0051c0065 others(1): Show a0000c0066 a0041c0054 a0051c0065 a0052c0067	a0000c0066t0003 a0041c0054t0003 a0051c0065t0004 others(1): Show a0000c0066t0003 a0041c0054t0003 a0051c0065t0004 a0052c0067t0003	a0000c0066t0003g0055 a0041c0054t0003g0058 a0051c0065t0004g0054 others(1): Show a0000c0066t0003g0055 a0041c0054t0003g0058 a0051c0065t0004g0054 a0052c0067t0003g0061	4	226	0.0177	-21	c.186 others(30): Show c.1866_1886delGGAGCAGGAGGAGAAGATACG	p.Glu others(13): Show p.Glu623_Arg629del	GOLGA6L22	ENSG00000277865.6	transcript	ENST00000622895.2	protein_coding	8/9	1957/4401	1866/2565	622/854		INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA6L22_chr15_22453903_22474226	22466616	AAGAAGAT others(14): Show AAGAAGATACGGGAGCAGGAGG	A A	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02886.hp1 HG03453.hp2 HG02886.hp1 HG03453.hp2	a0048 a0051 a0048 a0051	a0048c0062 a0051c0065 a0048c0062 a0051c0065	a0048c0062t0004 a0051c0065t0004 a0048c0062t0004 a0051c0065t0004	a0048c0062t0004g0057 a0051c0065t0004g0054 a0048c0062t0004g0057 a0051c0065t0004g0054	2	226	0.0089	-21	c.236 others(30): Show c.2367_2387delGGAGCAGGAGGAGAAGATACG	p.Glu others(13): Show p.Glu790_Arg796del	GOLGA6L22	ENSG00000277865.6	transcript	ENST00000622895.2	protein_coding	8/9	2458/4401	2367/2565	789/854		INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA6L24_chr15_28342851_28363084	28350524	TTCCTGCT others(14): Show TTCCTGCTCACACATCTTCCCC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	NA18950.hp2 NA18954.hp2 NA18950.hp2 NA18954.hp2	a0029 a0030 a0029 a0030	a0029c0036 a0030c0038 a0029c0036 a0030c0038	a0029c0036t0007 a0030c0038t0007 a0029c0036t0007 a0030c0038t0007	a0029c0036t0007g0064 a0030c0038t0007g0066 a0029c0036t0007g0064 a0030c0038t0007g0066	2	200	0.0100	-21	c.220 others(30): Show c.2205_2225delGGGGAAGATGTGTGAGCAGGA	p.Gly others(13): Show p.Gly736_Glu742del	GOLGA6L24	ENSG00000237850.8	transcript	ENST00000568624.2	protein_coding	8/9	2286/4304	2205/2499	735/832			chr15	TogoVar
GOLGA6L26_chr15_23319535_23339196	23327133	CCATATCT others(14): Show CCATATCTTCTCCTCCTGCTCT	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG01517.hp1 HG01517.hp1	a0031 a0031	a0031c0035 a0031c0035	a0031c0035t0002 a0031c0035t0002	a0031c0035t0002g0043 a0031c0035t0002g0043	1	182	0.0055	-21	c.170 others(30): Show c.1707_1727delAGAGCAGGAGGAGAAGATATG	p.Glu others(13): Show p.Glu570_Trp576del	GOLGA6L26	ENSG00000273756.5	transcript	ENST00000618455.5	protein_coding	8/9	1788/3731	1707/1950	569/649			chr15	TogoVar
GOLGA6L26_chr15_23319535_23339196	23327298	TCGTATCT others(14): Show TCGTATCTTCTCCTCCTGCTCC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00408.hp1 HG01109.hp1 HG01169.hp2 others(34): Show HG00408.hp1 HG01109.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01257.hp1 HG01517.hp1 HG01943.hp1 HG02004.hp1 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02630.hp1 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG02965.hp1 HG02976.hp1 HG03041.hp2 HG03225.hp1 HG03579.hp1 HG03831.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 NA18522.hp1 NA18954.hp1 NA18963.hp1 NA19067.hp1 NA19079.hp1 NA20805.hp1 NA20805.hp2 NA21309.hp1	a0003 a0007 a0008 others(19): Show a0003 a0007 a0008 a0009 a0012 a0016 a0017 a0019 a0022 a0024 a0026 a0028 a0029 a0031 a0035 a0038 a0039 a0040 a0042 a0053 a0054 a0055	a0003c0003 a0007c0011 a0008c0013 others(20): Show a0003c0003 a0007c0011 a0008c0013 a0008c0028 a0009c0008 a0012c0012 a0016c0017 a0017c0020 a0019c0019 a0022c0024 a0024c0026 a0026c0032 a0028c0031 a0029c0029 a0031c0035 a0035c0038 a0038c0041 a0039c0040 a0040c0043 a0042c0044 a0053c0058 a0054c0057 a0055c0059	a0003c0003t0005 a0007c0011t0002 a0008c0013t0002 others(23): Show a0003c0003t0005 a0007c0011t0002 a0008c0013t0002 a0008c0028t0002 a0009c0008t0002 a0009c0008t0004 a0012c0012t0002 a0012c0012t0004 a0016c0017t0006 a0017c0020t0002 a0019c0019t0001 a0019c0019t0003 a0022c0024t0002 a0024c0026t0003 a0026c0032t0002 a0028c0031t0002 a0029c0029t0002 a0031c0035t0002 a0035c0038t0005 a0038c0041t0002 a0039c0040t0005 a0040c0043t0002 a0042c0044t0005 a0053c0058t0005 a0054c0057t0004 a0055c0059t0002	a0003c0003t0005g0013 a0003c0003t0005g0062 a0003c0003t0005g0063 others(31): Show a0003c0003t0005g0013 a0003c0003t0005g0062 a0003c0003t0005g0063 a0003c0003t0005g0064 a0003c0003t0005g0066 a0007c0011t0002g0021 a0007c0011t0002g0126 a0008c0013t0002g0031 a0008c0013t0002g0033 a0008c0028t0002g0032 a0009c0008t0002g0034 a0009c0008t0002g0038 a0009c0008t0004g0040 a0012c0012t0002g0027 a0012c0012t0004g0030 a0016c0017t0006g0067 a0016c0017t0006g0068 a0017c0020t0002g0015 a0019c0019t0001g0103 a0019c0019t0003g0077 a0022c0024t0002g0025 a0024c0026t0003g0029 a0026c0032t0002g0036 a0028c0031t0002g0035 a0029c0029t0002g0039 a0031c0035t0002g0043 a0035c0038t0005g0049 a0038c0041t0002g0056 a0039c0040t0005g0055 a0040c0043t0002g0058 a0042c0044t0005g0065 a0053c0058t0005g0117 a0054c0057t0004g0121 a0055c0059t0002g0115	37	182	0.2033	-21	c.154 others(30): Show c.1542_1562delGGAGCAGGAGGAGAAGATACG	p.Glu others(13): Show p.Glu515_Arg521del	GOLGA6L26	ENSG00000273756.5	transcript	ENST00000618455.5	protein_coding	8/9	1623/3731	1542/1950	514/649			chr15	TogoVar
GOLGA6L2_chr15_23434038_23452243	23441523	TCCGCATC others(14): Show TCCGCATCTTCTCCTCCTGCTC	T T	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG02258.hp2 HG02615.hp1 HG02717.hp2 others(15): Show HG02258.hp2 HG02615.hp1 HG02717.hp2 HG02809.hp1 HG02818.hp2 HG02970.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03516.hp1 HG03927.hp2 HG04115.hp2 HG06807.hp2 NA19240.hp1	a0002 a0009 a0026 others(1): Show a0002 a0009 a0026 a0027	a0002c0008 a0002c0011 a0002c0041 others(3): Show a0002c0008 a0002c0011 a0002c0041 a0009c0021 a0026c0040 a0027c0039	a0002c0008t0007 a0002c0008t0013 a0002c0008t0021 others(6): Show a0002c0008t0007 a0002c0008t0013 a0002c0008t0021 a0002c0008t0024 a0002c0011t0008 a0002c0041t0007 a0009c0021t0014 a0026c0040t0022 a0027c0039t0007	a0002c0008t0007g0016 a0002c0008t0013g0043 a0002c0008t0021g0127 others(8): Show a0002c0008t0007g0016 a0002c0008t0013g0043 a0002c0008t0021g0127 a0002c0008t0024g0128 a0002c0011t0008g0018 a0002c0011t0008g0138 a0002c0041t0007g0126 a0009c0021t0014g0056 a0009c0021t0014g0057 a0026c0040t0022g0125 a0027c0039t0007g0124	18	396	0.0455	-21	c.931 others(28): Show c.931_951delGAGCAGGAGGAGAAGATGCGG	p.Glu others(13): Show p.Glu311_Arg317del	GOLGA6L2	ENSG00000174450.13	transcript	ENST00000567107.6	protein_coding	8/8	1013/3499	931/2730	311/909			chr15	TogoVar
GOLGA6L4_chr15_84230773_84250358	84240569	CGAGGTGG others(14): Show CGAGGTGGAGGAGCTCCTGGAT	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG03927.hp1 HG03927.hp1	a0053 a0053	a0053c0068 a0053c0068	a0053c0068t0001 a0053c0068t0001	a0053c0068t0001g0069 a0053c0068t0001g0069	1	251	0.0040	-21	c.123 others(30): Show c.1236_1256delTGAGGTGGAGGAGCTCCTGGA	p.Asp others(13): Show p.Asp412_Leu418del	GOLGA6L4	ENSG00000184206.13	transcript	ENST00000510439.7	protein_coding	6/9	1298/4553	1236/1725	412/574		INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA6L6_chr15_20526856_20546800	20534590	ATCTCCTC others(14): Show ATCTCCTCCTGCTCTCGTATCT	A A	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02486.hp2 HG02486.hp2	a0033 a0033	a0033c0050 a0033c0050	a0033c0050t0002 a0033c0050t0002	a0033c0050t0002g0104 a0033c0050t0002g0104	1	214	0.0047	-21	c.182 others(30): Show c.1823_1843delAGATACGAGAGCAGGAGGAGA	p.Lys others(13): Show p.Lys608_Glu614del	GOLGA6L6	ENSG00000277322.1	transcript	ENST00000619213.1	protein_coding	8/9	1934/4013	1823/2175	608/724			chr15	TogoVar
GOLGA6L7_chr15_28836832_28853644	28838788	AATTCTGG others(14): Show AATTCTGGAGACCTGGGTGTGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0040 a0040	a0040c0027 a0040c0027	a0040c0027t0002 a0040c0027t0002	a0040c0027t0002g0076 a0040c0027t0002g0076	1	422	0.0024	-21	c.34 others(32): Show c.3426_*3446delCCACACCCAGGTCTCCAGAAT		GOLGA6L7	ENSG00000261649.7	transcript	ENST00000567390.7	protein_coding					3043		chr15	TogoVar
GOLGA6L7_chr15_28836832_28853644	28842669	CCATCTGC others(14): Show CCATCTGCTCCTCCTGCTTCCT	C C	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	NA20905.hp2 NA20905.hp2	a0041 a0041	a0041c0029 a0041c0029	a0041c0029t0002 a0041c0029t0002	a0041c0029t0002g0084 a0041c0029t0002g0084	1	422	0.0024	-21	c.141 others(30): Show c.1414_1434delAGGAAGCAGGAGGAGCAGATG	p.Arg others(13): Show p.Arg472_Met478del	GOLGA6L7	ENSG00000261649.7	transcript	ENST00000567390.7	protein_coding	9/9	1529/2367	1414/1869	472/622			chr15	TogoVar
GOLGA6L7_chr15_28836832_28853644	28842750	CCCCCATC others(14): Show CCCCCATCTGCTCCTCCTGCTT	C C	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG02109.hp1 HG02486.hp2 HG02622.hp1 others(3): Show HG02109.hp1 HG02486.hp2 HG02622.hp1 HG03225.hp2 HG03453.hp1 HG03579.hp1	a0020 a0033 a0036 others(2): Show a0020 a0033 a0036 a0037 a0051	a0020c0016 a0033c0046 a0036c0042 others(2): Show a0020c0016 a0033c0046 a0036c0042 a0037c0041 a0051c0023	a0020c0016t0002 a0033c0046t0002 a0036c0042t0002 others(2): Show a0020c0016t0002 a0033c0046t0002 a0036c0042t0002 a0037c0041t0002 a0051c0023t0002	a0020c0016t0002g0069 a0020c0016t0002g0070 a0033c0046t0002g0145 others(3): Show a0020c0016t0002g0069 a0020c0016t0002g0070 a0033c0046t0002g0145 a0036c0042t0002g0097 a0037c0041t0002g0098 a0051c0023t0002g0074	6	422	0.0142	-21	c.133 others(30): Show c.1333_1353delAAGCAGGAGGAGCAGATGGGG	p.Lys others(13): Show p.Lys445_Gly451del	GOLGA6L7	ENSG00000261649.7	transcript	ENST00000567390.7	protein_coding	9/9	1448/2367	1333/1869	445/622			chr15	TogoVar
GOLGA6L7_chr15_28836832_28853644	28843098	CCCCCATC others(14): Show CCCCCATCTGCTCCTCCTGCTT	C C	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG00099.hp1 HG00280.hp2 HG00408.hp2 others(112): Show HG00099.hp1 HG00280.hp2 HG00408.hp2 HG00558.hp1 HG00597.hp1 HG00673.hp1 HG00741.hp2 HG01069.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01167.hp1 HG01169.hp2 HG01256.hp1 HG01257.hp1 HG01261.hp1 HG01361.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01978.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02080.hp2 HG02083.hp1 HG02148.hp1 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02523.hp1 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02717.hp2 HG02735.hp1 HG02809.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp2 HG03209.hp2 HG03471.hp2 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03688.hp1 HG03704.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18947.hp1 NA18948.hp2 NA18950.hp1 NA18953.hp2 NA18954.hp1 NA18957.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18968.hp1 NA18969.hp1 NA18971.hp1 NA18975.hp1 NA18978.hp1 NA18986.hp1 NA18990.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA19002.hp1 NA19004.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19055.hp1 NA19060.hp1 NA19060.hp2 NA19064.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp2 NA19076.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19086.hp1 NA19088.hp2 NA20300.hp2 NA20905.hp2	a0002 a0003 a0006 others(13): Show a0002 a0003 a0006 a0007 a0009 a0014 a0019 a0024 a0035 a0039 a0040 a0041 a0042 a0043 a0044 a0045	a0002c0002 a0003c0003 a0006c0007 others(13): Show a0002c0002 a0003c0003 a0006c0007 a0007c0008 a0009c0010 a0014c0013 a0019c0018 a0024c0054 a0035c0040 a0039c0033 a0040c0027 a0041c0029 a0042c0028 a0043c0022 a0044c0032 a0045c0030	a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 others(23): Show a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 a0002c0002t0008 a0002c0002t0014 a0003c0003t0002 a0003c0003t0005 a0003c0003t0006 a0006c0007t0001 a0006c0007t0003 a0007c0008t0002 a0007c0008t0006 a0009c0010t0001 a0014c0013t0001 a0014c0013t0015 a0014c0013t0016 a0019c0018t0007 a0024c0054t0002 a0035c0040t0005 a0039c0033t0001 a0040c0027t0002 a0041c0029t0002 a0042c0028t0001 a0043c0022t0005 a0044c0032t0003 a0045c0030t0003	a0002c0002t0001g0023 a0002c0002t0001g0052 a0002c0002t0001g0057 others(47): Show a0002c0002t0001g0023 a0002c0002t0001g0052 a0002c0002t0001g0057 a0002c0002t0003g0006 a0002c0002t0003g0009 a0002c0002t0003g0016 a0002c0002t0003g0020 a0002c0002t0003g0021 a0002c0002t0003g0022 a0002c0002t0003g0051 a0002c0002t0003g0059 a0002c0002t0003g0060 a0002c0002t0003g0062 a0002c0002t0003g0065 a0002c0002t0005g0061 a0002c0002t0008g0032 a0002c0002t0014g0053 a0003c0003t0002g0002 a0003c0003t0002g0024 a0003c0003t0002g0034 a0003c0003t0002g0055 a0003c0003t0002g0073 a0003c0003t0002g0085 a0003c0003t0002g0086 a0003c0003t0005g0017 a0003c0003t0006g0077 a0003c0003t0006g0079 a0006c0007t0001g0045 a0006c0007t0003g0042 a0006c0007t0003g0131 a0006c0007t0003g0136 a0007c0008t0002g0025 a0007c0008t0002g0144 a0007c0008t0006g0081 a0009c0010t0001g0033 a0009c0010t0001g0067 a0009c0010t0001g0068 a0014c0013t0001g0091 a0014c0013t0015g0147 a0014c0013t0016g0148 a0019c0018t0007g0031 a0024c0054t0002g0128 a0035c0040t0005g0092 a0039c0033t0001g0083 a0040c0027t0002g0076 a0041c0029t0002g0084 a0042c0028t0001g0056 a0043c0022t0005g0071 a0044c0032t0003g0058 a0045c0030t0003g0063	115	422	0.2725	-21	c.985 others(29): Show c.985_1005delAAGCAGGAGGAGCAGATGGGG	p.Lys others(13): Show p.Lys329_Gly335del	GOLGA6L7	ENSG00000261649.7	transcript	ENST00000567390.7	protein_coding	9/9	1100/2367	985/1869	329/622			chr15	TogoVar
GOLGA6L7_chr15_28836832_28853644	28843122	CCATCTGC others(14): Show CCATCTGCTCCTCCTGCTTCCG	C C	conservative_inframe_deletion conservative_inframe_deletion	MODERATE	HG00735.hp1 NA18978.hp2 HG00735.hp1 NA18978.hp2	a0017 a0017	a0017c0019 a0017c0019	a0017c0019t0001 a0017c0019t0001	a0017c0019t0001g0114 a0017c0019t0001g0124 a0017c0019t0001g0114 a0017c0019t0001g0124	2	422	0.0047	-21	c.961 others(28): Show c.961_981delCGGAAGCAGGAGGAGCAGATG	p.Arg others(13): Show p.Arg321_Met327del	GOLGA6L7	ENSG00000261649.7	transcript	ENST00000567390.7	protein_coding	9/9	1076/2367	961/1869	321/622			chr15	TogoVar
GOLGA6L9_chr15_82424816_82444153	82434225	CGTGAACA others(14): Show CGTGAACAGGAGGAGAGGCTGT	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG01496.hp2 HG01496.hp2	a0028 a0028	a0028c0031 a0028c0031	a0028c0031t0001 a0028c0031t0001	a0028c0031t0001g0002 a0028c0031t0001g0002	1	455	0.0022	-21	c.666 others(28): Show c.666_686delGTGTGAACAGGAGGAGAGGCT	p.Cys others(13): Show p.Cys223_Leu229del	GOLGA6L9	ENSG00000197978.10	transcript	ENST00000618348.2	protein_coding	6/9	930/4305	666/1299	222/432		INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA8F_chr15_28373664_28397021	28385289	GAGGAGAG others(14): Show GAGGAGAGGCTTCAGGAGCAGC	G G	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00741.hp1 HG01361.hp1 HG01361.hp2 others(10): Show HG00741.hp1 HG01361.hp1 HG01361.hp2 HG01981.hp1 HG02615.hp1 HG02922.hp2 HG03017.hp2 HG03654.hp2 HG03688.hp1 HG03704.hp2 HG03942.hp1 HG03942.hp2 NA18946.hp1	a0005 a0017 a0005 a0017	a0005c0005 a0005c0032 a0005c0034 others(1): Show a0005c0005 a0005c0032 a0005c0034 a0017c0033	a0005c0005t0001 a0005c0005t0002 a0005c0005t0005 others(6): Show a0005c0005t0001 a0005c0005t0002 a0005c0005t0005 a0005c0005t0018 a0005c0005t0019 a0005c0005t0046 a0005c0032t0038 a0005c0034t0002 a0017c0033t0049	a0005c0005t0001g0027 a0005c0005t0002g0027 a0005c0005t0005g0005 others(9): Show a0005c0005t0001g0027 a0005c0005t0002g0027 a0005c0005t0005g0005 a0005c0005t0005g0094 a0005c0005t0005g0096 a0005c0005t0005g0097 a0005c0005t0018g0005 a0005c0005t0019g0005 a0005c0005t0046g0005 a0005c0032t0038g0099 a0005c0034t0002g0098 a0017c0033t0049g0095	13	270	0.0482	-21	c.105 others(30): Show c.1055_1075delAGGAGCAGCAGGAGAGGCTTC	p.Gln others(13): Show p.Gln352_Leu358del	GOLGA8F	ENSG00000153684.16	transcript	ENST00000526619.7	protein_coding	12/19	1153/4967	1055/1911	352/636		INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA8G_chr15_28514611_28537971	28526313	GGAAGCCT others(14): Show GGAAGCCTCTCCTGCTGCTCCT	G G	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02109.hp2 HG02109.hp2	a0012 a0012	a0012c0022 a0012c0022	a0012c0022t0002 a0012c0022t0002	a0012c0022t0002g0050 a0012c0022t0002g0050	1	100	0.0100	-21	c.109 others(30): Show c.1091_1111delAGGAGCAGCAGGAGAGGCTTC	p.Gln others(13): Show p.Gln364_Leu370del	GOLGA8G	ENSG00000183629.14	transcript	ENST00000525590.3	protein_coding	12/19	1173/4971	1091/1947	364/648			chr15	TogoVar
GOLGA8J_chr15_30077955_30101690	30091288	ACCTATCA others(14): Show ACCTATCAGCAGCAGGTGGCCG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01261.hp1 HG02258.hp1 others(8): Show HG01243.hp2 HG01261.hp1 HG02258.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG03209.hp2 HG03239.hp2 HG03486.hp2 HG06807.hp1 NA18971.hp1	a0010 a0021 a0042 others(3): Show a0010 a0021 a0042 a0043 a0045 a0055	a0010c0009 a0021c0021 a0042c0052 others(3): Show a0010c0009 a0021c0021 a0042c0052 a0043c0051 a0045c0053 a0055c0028	a0010c0009t0002 a0021c0021t0018 a0042c0052t0021 others(3): Show a0010c0009t0002 a0021c0021t0018 a0042c0052t0021 a0043c0051t0021 a0045c0053t0019 a0055c0028t0019	a0010c0009t0002g0024 a0010c0009t0002g0181 a0010c0009t0002g0182 others(6): Show a0010c0009t0002g0024 a0010c0009t0002g0181 a0010c0009t0002g0182 a0021c0021t0018g0183 a0021c0021t0018g0184 a0042c0052t0021g0066 a0043c0051t0021g0173 a0045c0053t0019g0149 a0055c0028t0019g0081	11	345	0.0319	-21	c.120 others(38): Show c.1201-234_1201-214delAGGTGGCCGCCTATCAGCAGC		GOLGA8J	ENSG00000179938.13	transcript	ENST00000567927.2	protein_coding	13/18					INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA8N_chr15_32588456_32612237	32601766	ACCTATCA others(14): Show ACCTATCAGCAGCAGGTGGCCG	A A	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0039 a0039	a0039c0059 a0039c0059	a0039c0059t0005 a0039c0059t0005	a0039c0059t0005g0065 a0039c0059t0005g0065	1	286	0.0035	-21	c.120 others(38): Show c.1201-234_1201-214delAGGTGGCCGCCTATCAGCAGC		GOLGA8N	ENSG00000232653.9	transcript	ENST00000448387.7	protein_coding	13/18					INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA8O_chr15_32436914_32460634	32447285	AGCTGCTG others(14): Show AGCTGCTGATAGGCGGCCACCT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02055.hp1 HG02647.hp2 others(1): Show HG00639.hp2 HG02055.hp1 HG02647.hp2 HG03540.hp2	a0012 a0017 a0012 a0017	a0012c0014 a0017c0017 a0012c0014 a0017c0017	a0012c0014t0018 a0017c0017t0004 a0012c0014t0018 a0017c0017t0004	a0012c0014t0018g0127 a0012c0014t0018g0138 a0012c0014t0018g0146 others(1): Show a0012c0014t0018g0127 a0012c0014t0018g0138 a0012c0014t0018g0146 a0017c0017t0004g0097	4	214	0.0187	-21	c.120 others(38): Show c.1201-234_1201-214delAGGTGGCCGCCTATCAGCAGC		GOLGA8O	ENSG00000206127.11	transcript	ENST00000509311.7	protein_coding	13/18						chr15	TogoVar
GOLGA8Q_chr15_30547050_30570684	30560282	CGTGGCCA others(14): Show CGTGGCCACCTATCAGCAGCAG	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp1 HG02723.hp2 HG02809.hp1	a0007 a0007	a0007c0010 a0007c0010	a0007c0010t0006 a0007c0010t0006	a0007c0010t0006g0024 a0007c0010t0006g0025 a0007c0010t0006g0024 a0007c0010t0006g0025	2	126	0.0159	-21	c.120 others(38): Show c.1201-247_1201-227delACCTATCAGCAGCAGGTGGCC		GOLGA8Q	ENSG00000178115.12	transcript	ENST00000562783.2	protein_coding	13/18					INFO_REALIGN_3_PRIME	chr15	TogoVar
GOLGA8S_chr15_23349748_23373341	23361149	CTTTTCTT others(14): Show CTTTTCTTTTCTTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp1 HG00639.hp1 others(6): Show HG00280.hp2 HG00621.hp1 HG00639.hp1 HG02109.hp1 HG02683.hp2 HG03669.hp1 HG03831.hp2 HG03834.hp1 NA20752.hp1	a0001 a0009 a0047 others(1): Show a0001 a0009 a0047 a0083	a0001c0056 a0009c0016 a0009c0032 others(2): Show a0001c0056 a0009c0016 a0009c0032 a0047c0043 a0083c0057	a0001c0056t0001 a0009c0016t0001 a0009c0032t0001 others(2): Show a0001c0056t0001 a0009c0016t0001 a0009c0032t0001 a0047c0043t0001 a0083c0057t0002	a0001c0056t0001g0136 a0009c0016t0001g0032 a0009c0016t0001g0113 others(4): Show a0001c0056t0001g0136 a0009c0016t0001g0032 a0009c0016t0001g0113 a0009c0016t0001g0137 a0009c0032t0001g0033 a0047c0043t0001g0127 a0083c0057t0002g0140	9	430	0.0209	-21	c.914 others(34): Show c.914-67_914-47delCTTTTCTTTTCTTTTCTTTTT		GOLGA8S	ENSG00000261739.3	transcript	ENST00000562295.3	protein_coding	11/18					INFO_REALIGN_3_PRIME	chr15	TogoVar

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