Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
NBPF12_chr1_146933324_147001198	146954969	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00735.hp1 HG02896.hp1 others(3): Show HG00609.hp2 HG00735.hp1 HG02896.hp1 NA18947.hp1 NA19010.hp1 NA19056.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0016 a0001c0001 a0008c0016	a0001c0001t0002 a0001c0001t0008 a0008c0016t0021 a0001c0001t0002 a0001c0001t0008 a0008c0016t0021	a0001c0001t0002g0094 a0001c0001t0002g0103 a0001c0001t0002g0111 others(3): Show a0001c0001t0002g0094 a0001c0001t0002g0103 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0008g0113 a0008c0016t0021g0081	6	122	0.0492	-22	c.-18 others(41): Show c.-184+3504_-184+3525delTATATATATATATATATATATA	NBPF12	ENSG00000268043.9	transcript	ENST00000698835.1	protein_coding	5/36		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF12_chr1_146933324_147001198	146992456	CTCTCTCT others(15): Show CTCTCTCTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03453.hp2 HG02647.hp1 HG03453.hp2	a0007 a0007	a0007c0049 a0007c0050 a0007c0049 a0007c0050	a0007c0049t0009 a0007c0050t0017 a0007c0049t0009 a0007c0050t0017	a0007c0049t0009g0120 a0007c0050t0017g0119 a0007c0049t0009g0120 a0007c0050t0017g0119	2	122	0.0164	-22	c.384 others(39): Show c.3849-254_3849-233delCTCTCTGTGTGTGTGTGTGTGT	NBPF12	ENSG00000268043.9	transcript	ENST00000698835.1	protein_coding	34/36		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF12_chr1_146933324_147001198	146992458	CTCTCTGT others(15): Show CTCTCTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0014 a0014	a0014c0048 a0014c0048	a0014c0048t0009 a0014c0048t0009	a0014c0048t0009g0118 a0014c0048t0009g0118	1	122	0.0082	-22	c.384 others(39): Show c.3849-252_3849-231delCTCTGTGTGTGTGTGTGTGTGT	NBPF12	ENSG00000268043.9	transcript	ENST00000698835.1	protein_coding	34/36		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF12_chr1_146933324_147001198	146992460	CTCTGTGT others(15): Show CTCTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0005 a0002c0006t0005	a0002c0006t0005g0021 a0002c0006t0005g0021	1	122	0.0082	-22	c.384 others(39): Show c.3849-250_3849-229delCTGTGTGTGTGTGTGTGTGTGT	NBPF12	ENSG00000268043.9	transcript	ENST00000698835.1	protein_coding	34/36		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF14_chr1_148526385_148601011	148538229	CACACACA others(15): Show CACACACACACACACACACAGAG	C C	intron_variant intron_variant	MODIFIER	HG02622.hp2 NA18939.hp1 NA18964.hp1 HG02622.hp2 NA18939.hp1 NA18964.hp1	a0038 a0110 a0038 a0110	a0038c0018 a0110c0159 a0038c0018 a0110c0159	a0038c0018t0007 a0110c0159t0010 a0038c0018t0007 a0110c0159t0010	a0038c0018t0007g0090 a0038c0018t0007g0091 a0110c0159t0010g0220 a0038c0018t0007g0090 a0038c0018t0007g0091 a0110c0159t0010g0220	3	222	0.0135	-22	c.793 others(39): Show c.7935-245_7935-224delCTCTGTGTGTGTGTGTGTGTGT	NBPF14	ENSG00000270629.7	transcript	ENST00000619423.4	protein_coding	64/70			chr1	TogoVar
NBPF14_chr1_148526385_148601011	148574452	CACACACA others(15): Show CACACACACACACACACACACAG	C C	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01928.hp2 HG03927.hp1 HG01099.hp2 HG01928.hp2 HG03927.hp1	a0002 a0002	a0002c0101 a0002c0105 a0002c0106 a0002c0101 a0002c0105 a0002c0106	a0002c0101t0001 a0002c0105t0001 a0002c0106t0001 a0002c0101t0001 a0002c0105t0001 a0002c0106t0001	a0002c0101t0001g0145 a0002c0105t0001g0128 a0002c0106t0001g0130 a0002c0101t0001g0145 a0002c0105t0001g0128 a0002c0106t0001g0130	3	222	0.0135	-22	c.230 others(39): Show c.2304-249_2304-228delCTGTGTGTGTGTGTGTGTGTGT	NBPF14	ENSG00000270629.7	transcript	ENST00000619423.4	protein_coding	18/70			chr1	TogoVar
NBPF19_chr1_149470045_149561361	149495649	CTCTCTCT others(15): Show CTCTCTCTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02896.hp1 HG02897.hp1 others(1): Show HG02145.hp1 HG02896.hp1 HG02897.hp1 HG03130.hp2	a0015 a0173 a0015 a0173	a0015c0036 a0015c0192 a0173c0191 a0015c0036 a0015c0192 a0173c0191	a0015c0036t0006 a0015c0192t0006 a0173c0191t0006 a0015c0036t0006 a0015c0192t0006 a0173c0191t0006	a0015c0036t0006g0004 a0015c0192t0006g0270 a0173c0191t0006g0271 a0015c0036t0006g0004 a0015c0192t0006g0270 a0173c0191t0006g0271	4	276	0.0145	-22	c.222 others(39): Show c.2223-251_2223-230delCTCTCTGTGTGTGTGTGTGTGT	NBPF19	ENSG00000271383.9	transcript	ENST00000651566.2	protein_coding	19/93		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF19_chr1_149470045_149561361	149500404	CTCTCTCT others(15): Show CTCTCTCTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02080.hp2 NA18939.hp2 NA18983.hp1 HG02080.hp2 NA18939.hp2 NA18983.hp1	a0207 a0208 a0209 a0207 a0208 a0209	a0207c0046 a0208c0048 a0209c0047 a0207c0046 a0208c0048 a0209c0047	a0207c0046t0002 a0208c0048t0002 a0209c0047t0002 a0207c0046t0002 a0208c0048t0002 a0209c0047t0002	a0207c0046t0002g0241 a0208c0048t0002g0251 a0209c0047t0002g0242 a0207c0046t0002g0241 a0208c0048t0002g0251 a0209c0047t0002g0242	3	276	0.0109	-22	c.295 others(39): Show c.2955-251_2955-230delCTCTCTGTGTGTGTGTGTGTGT	NBPF19	ENSG00000271383.9	transcript	ENST00000651566.2	protein_coding	25/93		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF19_chr1_149470045_149561361	149533680	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0180 a0180	a0180c0072 a0180c0072	a0180c0072t0002 a0180c0072t0002	a0180c0072t0002g0218 a0180c0072t0002g0218	1	276	0.0036	-22	c.807 others(39): Show c.8079-219_8079-198delGTGTGTGTGTGTGTGTGTGTGT	NBPF19	ENSG00000271383.9	transcript	ENST00000651566.2	protein_coding	67/93		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF20_chr1_145285005_145430603	145347548	CACACAGA others(15): Show CACACAGACACACACACAGACAA	C C	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0001 a0004c0003t0001	a0004c0003t0001g0001 a0004c0003t0001g0001	1	6	0.1667	-22	c.807 others(39): Show c.8079-253_8079-232delTTGTCTGTGTGTGTGTCTGTGT	NBPF20	ENSG00000162825.18	transcript	ENST00000698833.1	protein_coding	72/142			chr1	TogoVar
NBPF3_chr1_21435137_21489900	21437024	GGGGTGCT others(15): Show GGGGTGCTTGGGCAGCTGGGGGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0011 a0011	a0011c0013 a0011c0013	a0011c0013t0008 a0011c0013t0008	a0011c0013t0008g0076 a0011c0013t0008g0076	1	394	0.0025	-22	c.-34 others(33): Show c.-3463_-3442delGGGTGCTTGGGCAGCTGGGGGT	NBPF3	ENSG00000142794.19	transcript	ENST00000318249.10	protein_coding		3112		chr1	TogoVar
NBPF4_chr1_108217464_108249076	108244901	GATATATA others(15): Show GATATATATATATATATATATAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02809.hp1 HG03942.hp2 HG02572.hp1 HG02809.hp1 HG03942.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0001 a0003c0002t0001 a0001c0001t0001 a0003c0002t0001	a0001c0001t0001g0010 a0003c0002t0001g0019 a0001c0001t0001g0010 a0003c0002t0001g0019	3	134	0.0224	-22	c.-10 others(33): Show c.-1060_-1039delATATATATATATATATATATAT	NBPF4	ENSG00000196427.14	transcript	ENST00000415641.8	protein_coding		826		chr1	TogoVar
NBPF4_chr1_108217464_108249076	108244931	TATATATA others(15): Show TATATATATATATATATACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp2 HG02055.hp1 HG02109.hp2 others(1): Show HG00597.hp2 HG02055.hp1 HG02109.hp2 NA19009.hp2	a0001 a0012 a0001 a0012	a0001c0001 a0001c0017 a0012c0018 a0001c0001 a0001c0017 a0012c0018	a0001c0001t0003 a0001c0017t0007 a0012c0018t0003 a0001c0001t0003 a0001c0017t0007 a0012c0018t0003	a0001c0001t0003g0011 a0001c0001t0003g0023 a0001c0017t0007g0027 others(1): Show a0001c0001t0003g0011 a0001c0001t0003g0023 a0001c0017t0007g0027 a0012c0018t0003g0024	4	134	0.0299	-22	c.-10 others(33): Show c.-1090_-1069delGTGTGTATATATATATATATAT	NBPF4	ENSG00000196427.14	transcript	ENST00000415641.8	protein_coding		856		chr1	TogoVar
NBPF8_chr1_120410035_120474676	120431337	TATTTATC others(15): Show TATTTATCATCTCCAAATAGGGA	T T	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0031 a0001c0002t0031	a0001c0002t0031g0065 a0001c0002t0031g0065	1	292	0.0034	-22	c.-29 others(41): Show c.-292+3493_-292+3514delTTATCATCTCCAAATAGGGAAT	NBPF8	ENSG00000270231.5	transcript	ENST00000698216.1	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF8_chr1_120410035_120474676	120461016	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0056 a0001c0002t0056	a0001c0002t0056g0048 a0001c0002t0056g0048	1	292	0.0034	-22	c.185 others(39): Show c.1854-210_1854-189delGTGTGTGTGTGTGTGTGTGTGT	NBPF8	ENSG00000270231.5	transcript	ENST00000698216.1	protein_coding	16/22		INFO_REALIGN_3_PRIME	chr1	TogoVar
NBPF9_chr1_149047186_149108551	149057704	GACACACA others(15): Show GACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG04228.hp2 HG03831.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0056 a0001c0001t0003 a0001c0001t0056	a0001c0001t0003g0034 a0001c0001t0056g0081 a0001c0001t0003g0034 a0001c0001t0056g0081	2	344	0.0058	-22	c.281 others(39): Show c.2811-219_2811-198delGTGTGTGTGTGTGTGTGTGTGT	NBPF9	ENSG00000269713.9	transcript	ENST00000698832.1	protein_coding	27/29			chr1	TogoVar
NCAM1_chr11_112956420_113283436	113055978	GATATATA others(15): Show GATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02451.hp1 HG03130.hp2 HG01884.hp1 HG02451.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0006 a0001c0001t0010 a0001c0005t0029 a0001c0001t0006 a0001c0001t0010 a0001c0005t0029	a0001c0001t0006g0206 a0001c0001t0010g0208 a0001c0005t0029g0202 a0001c0001t0006g0206 a0001c0001t0010g0208 a0001c0005t0029g0202	3	242	0.0124	-22	c.52+ others(39): Show c.52+94340_52+94361delTATATATATATATATATATATA	NCAM1	ENSG00000149294.18	transcript	ENST00000316851.12	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
NCAM1_chr11_112956420_113283436	113132604	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	242	0.0041	-22	c.53- others(39): Show c.53-69749_53-69728delGTGTGTGTGTGTGTGTGTGTGT	NCAM1	ENSG00000149294.18	transcript	ENST00000316851.12	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
NCAM1_chr11_112956420_113283436	113193639	CAAAAAAA others(15): Show CAAAAAAAGAAAGGAAGAAAAAG	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02886.hp1 HG02451.hp1 HG02886.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0029 a0001c0005t0044 a0001c0005t0029 a0001c0005t0044	a0001c0005t0029g0202 a0001c0005t0044g0234 a0001c0005t0029g0202 a0001c0005t0044g0234	2	242	0.0083	-22	c.53- others(37): Show c.53-8727_53-8706delGAAGAAAAAGAAAAAAAGAAAG	NCAM1	ENSG00000149294.18	transcript	ENST00000316851.12	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
NCAM2_chr21_20993409_21548329	21210967	AACACACA others(15): Show AACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0017 a0002c0003t0017	a0002c0003t0017g0038 a0002c0003t0017g0038	1	132	0.0076	-22	c.56- others(39): Show c.56-69576_56-69555delACACACACACACACACACACAC	NCAM2	ENSG00000154654.15	transcript	ENST00000400546.6	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
NCAM2_chr21_20993409_21548329	21452966	ATATATTA others(15): Show ATATATTATTATATATTATATAT	A A	intron_variant intron_variant	MODIFIER	HG02293.hp2 HG02559.hp2 HG03130.hp1 others(2): Show HG02293.hp2 HG02559.hp2 HG03130.hp1 HG03540.hp1 HG03927.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 others(1): Show a0001c0001 a0001c0004 a0002c0002 a0002c0003	a0001c0001t0030 a0001c0004t0002 a0002c0002t0009 others(2): Show a0001c0001t0030 a0001c0004t0002 a0002c0002t0009 a0002c0002t0035 a0002c0003t0013	a0001c0001t0030g0112 a0001c0004t0002g0026 a0002c0002t0009g0002 others(2): Show a0001c0001t0030g0112 a0001c0004t0002g0026 a0002c0002t0009g0002 a0002c0002t0035g0052 a0002c0003t0013g0118	5	132	0.0379	-22	c.165 others(43): Show c.1655-13631_1655-13610delTATATATTATATATTATATTAT	NCAM2	ENSG00000154654.15	transcript	ENST00000400546.6	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
NCAPD2_chr12_6489102_6536955	6520379	ACCACAGG others(15): Show ACCACAGGCACACACCATTACAC	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00408.hp2 others(97): Show HG00280.hp1 HG00323.hp2 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00673.hp1 HG00735.hp2 HG01070.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01168.hp1 HG01169.hp1 HG01257.hp1 HG01261.hp2 HG01361.hp1 HG01891.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01975.hp2 HG01993.hp2 HG02027.hp1 HG02040.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02717.hp2 HG02738.hp1 HG02738.hp2 HG03490.hp1 HG03540.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG04228.hp1 NA18612.hp2 NA18944.hp2 NA18946.hp1 NA18948.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp2 NA18982.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp2 NA18988.hp1 NA18995.hp1 NA18999.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp1 NA19054.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp1 NA19066.hp1 NA19067.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp2 NA20805.hp2 NA21309.hp2	a0003 a0005 a0006 others(1): Show a0003 a0005 a0006 a0010	a0003c0003 a0003c0010 a0003c0015 others(3): Show a0003c0003 a0003c0010 a0003c0015 a0005c0006 a0006c0008 a0010c0017	a0003c0003t0003 a0003c0003t0013 a0003c0003t0014 others(6): Show a0003c0003t0003 a0003c0003t0013 a0003c0003t0014 a0003c0010t0001 a0003c0010t0003 a0003c0015t0003 a0005c0006t0003 a0006c0008t0003 a0010c0017t0003	a0003c0003t0003g0001 a0003c0003t0003g0007 a0003c0003t0003g0008 others(91): Show a0003c0003t0003g0001 a0003c0003t0003g0007 a0003c0003t0003g0008 a0003c0003t0003g0023 a0003c0003t0003g0024 a0003c0003t0003g0025 a0003c0003t0003g0026 a0003c0003t0003g0027 a0003c0003t0003g0028 a0003c0003t0003g0029 a0003c0003t0003g0030 a0003c0003t0003g0031 a0003c0003t0003g0032 a0003c0003t0003g0033 a0003c0003t0003g0034 a0003c0003t0003g0035 a0003c0003t0003g0036 a0003c0003t0003g0037 a0003c0003t0003g0038 a0003c0003t0003g0039 a0003c0003t0003g0041 a0003c0003t0003g0043 a0003c0003t0003g0044 a0003c0003t0003g0045 a0003c0003t0003g0046 a0003c0003t0003g0048 a0003c0003t0003g0049 a0003c0003t0003g0050 a0003c0003t0003g0052 a0003c0003t0003g0053 a0003c0003t0003g0054 a0003c0003t0003g0055 a0003c0003t0003g0057 a0003c0003t0003g0058 a0003c0003t0003g0059 a0003c0003t0003g0061 a0003c0003t0003g0063 a0003c0003t0003g0064 a0003c0003t0003g0065 a0003c0003t0003g0066 a0003c0003t0003g0067 a0003c0003t0003g0068 a0003c0003t0003g0070 a0003c0003t0003g0071 a0003c0003t0003g0072 a0003c0003t0003g0076 a0003c0003t0003g0077 a0003c0003t0003g0078 a0003c0003t0003g0079 a0003c0003t0003g0081 a0003c0003t0003g0082 a0003c0003t0003g0083 a0003c0003t0003g0086 a0003c0003t0003g0090 a0003c0003t0003g0091 a0003c0003t0003g0092 a0003c0003t0003g0093 a0003c0003t0003g0094 a0003c0003t0003g0095 a0003c0003t0003g0096 a0003c0003t0003g0098 a0003c0003t0003g0099 a0003c0003t0013g0080 a0003c0003t0013g0097 a0003c0003t0014g0075 a0003c0003t0014g0089 a0003c0010t0001g0047 a0003c0010t0001g0073 a0003c0010t0001g0074 a0003c0010t0001g0087 a0003c0010t0001g0088 a0003c0010t0003g0217 a0003c0015t0003g0084 a0003c0015t0003g0085 a0005c0006t0003g0112 a0005c0006t0003g0120 a0005c0006t0003g0121 a0005c0006t0003g0123 a0005c0006t0003g0124 a0005c0006t0003g0125 a0005c0006t0003g0130 a0005c0006t0003g0132 a0005c0006t0003g0141 a0005c0006t0003g0150 a0005c0006t0003g0151 a0005c0006t0003g0183 a0006c0008t0003g0002 a0006c0008t0003g0040 a0006c0008t0003g0042 a0006c0008t0003g0051 a0006c0008t0003g0060 a0006c0008t0003g0069 a0010c0017t0003g0056 a0010c0017t0003g0062	100	432	0.2315	-22	c.159 others(39): Show c.1590-589_1590-568delTACACCCACAGGCACACACCAT	NCAPD2	ENSG00000010292.13	transcript	ENST00000315579.10	protein_coding	13/31		INFO_REALIGN_3_PRIME	chr12	TogoVar
NCAPG2_chr7_158626169_158709804	158672280	GTGTGTGT others(15): Show GTGTGTGTGTGTGTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00438.hp1 HG00621.hp1 others(29): Show HG00099.hp1 HG00438.hp1 HG00621.hp1 HG01123.hp1 HG01358.hp2 HG01433.hp1 HG01516.hp1 HG01943.hp1 HG01952.hp2 HG02040.hp2 HG02071.hp2 HG02148.hp2 HG02683.hp2 HG02698.hp2 HG02738.hp1 HG03225.hp1 HG03239.hp2 HG03491.hp1 HG03492.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 NA18954.hp2 NA18968.hp2 NA18969.hp1 NA18985.hp1 NA18999.hp1 NA19056.hp2 NA19063.hp1 NA19066.hp2 NA19085.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0001c0001t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0001g0240 a0001c0001t0001g0245 a0001c0001t0001g0259 others(29): Show a0001c0001t0001g0240 a0001c0001t0001g0245 a0001c0001t0001g0259 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0302 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0352 a0001c0001t0001g0358 a0001c0001t0001g0363 a0001c0001t0001g0364 a0001c0001t0001g0365 a0001c0001t0001g0366 a0001c0001t0001g0367 a0001c0001t0001g0370 a0001c0001t0002g0305 a0002c0002t0001g0150	32	378	0.0847	-22	c.132 others(39): Show c.1327-636_1327-615delTATATATATACACACACACACA	NCAPG2	ENSG00000146918.20	transcript	ENST00000356309.8	protein_coding	12/27			chr7	TogoVar
NCAPG2_chr7_158626169_158709804	158672286	GTGTGTGT others(15): Show GTGTGTGTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0339 a0001c0001t0001g0339	1	378	0.0027	-22	c.132 others(39): Show c.1327-642_1327-621delTATATATATATATATACACACA	NCAPG2	ENSG00000146918.20	transcript	ENST00000356309.8	protein_coding	12/27			chr7	TogoVar
NCAPH_chr2_96330766_96382091	96361763	TATATACA others(15): Show TATATACATATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0065 a0002c0002t0001g0065	1	356	0.0028	-22	c.158 others(41): Show c.1587+1059_1587+1080delCATATATATATATACACATATA	NCAPH	ENSG00000121152.10	transcript	ENST00000240423.9	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCK1_chr3_136857208_136956606	136862644	CCGCCCGT others(15): Show CCGCCCGTGCGAGCCTGGGAGGT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(137): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00423.hp2 HG00544.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01169.hp1 HG01243.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01517.hp2 HG01891.hp2 HG01978.hp1 HG02015.hp2 HG02055.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03195.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03669.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18952.hp1 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18963.hp1 NA18964.hp1 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18994.hp1 NA19000.hp2 NA19011.hp1 NA19012.hp2 NA19030.hp1 NA19054.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19070.hp1 NA19079.hp2 NA19088.hp2 NA19090.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0004 a0003c0003 others(1): Show a0001c0001 a0001c0004 a0003c0003 a0004c0005	a0001c0001t0001 a0001c0001t0004 a0001c0001t0010 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0004t0001 a0003c0003t0001 a0004c0005t0008	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(135): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0229 a0001c0001t0004g0016 a0001c0001t0004g0017 a0001c0001t0004g0018 a0001c0001t0004g0025 a0001c0001t0010g0113 a0001c0001t0011g0055 a0001c0001t0012g0085 a0001c0001t0013g0131 a0001c0001t0014g0020 a0001c0001t0015g0019 a0001c0001t0016g0004 a0001c0004t0001g0115 a0003c0003t0001g0021 a0003c0003t0001g0022 a0003c0003t0001g0023 a0004c0005t0008g0127	140	232	0.6035	-22	c.-19 others(37): Show c.-19+294_-19+315delCCCGTGCGAGCCTGGGAGGTCG	NCK1	ENSG00000158092.7	transcript	ENST00000481752.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
NCK2_chr2_105739912_105899272	105864828	TACACACA others(15): Show TACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0054 a0001c0001t0006g0054	1	334	0.0030	-22	c.226 others(39): Show c.226+9564_226+9585delACACACACACACACACACACAC	NCK2	ENSG00000071051.14	transcript	ENST00000233154.9	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCKAP5_chr2_132666788_133573463	132794251	TATATATA others(15): Show TATATATATATATAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0002 a0005c0007t0002	a0005c0007t0002g0051 a0005c0007t0002g0051	1	70	0.0143	-22	c.909 others(39): Show c.909+2355_909+2376delCTCTCTCTCTATATATATATAT	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	12/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	132920767	GTATGTAT others(15): Show GTATGTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0034	1	70	0.0143	-22	c.580 others(41): Show c.580-41873_580-41852delTATATATATATATATATACATA	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	8/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	132920771	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02896.hp2 HG03471.hp1 others(2): Show HG01109.hp2 HG02896.hp2 HG03471.hp1 HG06807.hp1 NA19043.hp1	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0017	a0001c0001 a0001c0024 a0004c0003 others(2): Show a0001c0001 a0001c0024 a0004c0003 a0005c0007 a0017c0016	a0001c0001t0001 a0001c0024t0001 a0004c0003t0001 others(2): Show a0001c0001t0001 a0001c0024t0001 a0004c0003t0001 a0005c0007t0001 a0017c0016t0001	a0001c0001t0001g0022 a0001c0024t0001g0013 a0004c0003t0001g0014 others(2): Show a0001c0001t0001g0022 a0001c0024t0001g0013 a0004c0003t0001g0014 a0005c0007t0001g0012 a0017c0016t0001g0052	5	70	0.0714	-22	c.580 others(41): Show c.580-41877_580-41856delTATATATATATATATATATATA	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	8/19			chr2	TogoVar
NCKAP5_chr2_132666788_133573463	133115775	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02630.hp2 HG02976.hp2 others(4): Show HG01109.hp2 HG02630.hp2 HG02976.hp2 HG03130.hp1 HG03453.hp1 NA18906.hp2 NA21309.hp2	a0001 a0002 a0005 others(3): Show a0001 a0002 a0005 a0007 a0008 a0014	a0001c0009 a0002c0002 a0005c0007 others(4): Show a0001c0009 a0002c0002 a0005c0007 a0005c0018 a0007c0005 a0008c0008 a0014c0027	a0001c0009t0001 a0002c0002t0002 a0005c0007t0001 others(4): Show a0001c0009t0001 a0002c0002t0002 a0005c0007t0001 a0005c0018t0002 a0007c0005t0001 a0008c0008t0002 a0014c0027t0001	a0001c0009t0001g0042 a0002c0002t0002g0028 a0005c0007t0001g0012 others(4): Show a0001c0009t0001g0042 a0002c0002t0002g0028 a0005c0007t0001g0012 a0005c0018t0002g0063 a0007c0005t0001g0029 a0008c0008t0002g0025 a0014c0027t0001g0044	7	70	0.1000	-22	c.341 others(41): Show c.341+14181_341+14202delTATATATATATATATATATATA	NCKAP5	ENSG00000176771.18	transcript	ENST00000409261.6	protein_coding	6/19			chr2	TogoVar
NCMAP_chr1_24551087_24614328	24604573	TAAAAAAA others(15): Show TAAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02976.hp2 HG03139.hp2 HG02647.hp2 HG02976.hp2 HG03139.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0030 a0002c0002t0004g0031 a0002c0002t0004g0057 a0002c0002t0004g0030 a0002c0002t0004g0031 a0002c0002t0004g0057	3	402	0.0075	-22	c.168 others(39): Show c.168-1021_168-1000delAAAAAAAAAAAAAAAAAAAAAA	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCMAP_chr1_24551087_24614328	24604599	AAAAAAAA others(15): Show AAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02280.hp1 HG02027.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0019 a0001c0001t0003 a0001c0001t0019	a0001c0001t0003g0277 a0001c0001t0019g0347 a0001c0001t0003g0277 a0001c0001t0019g0347	2	402	0.0050	-22	c.168 others(38): Show c.168-1005_168-984delAAAAAATATATATATATATATA	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCMAP_chr1_24551087_24614328	24604603	AAAATATA others(15): Show AAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02559.hp2 HG03139.hp1 others(6): Show HG02080.hp1 HG02559.hp2 HG03139.hp1 HG03471.hp1 HG03486.hp1 NA18947.hp1 NA18952.hp1 NA18969.hp2 NA18994.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0218 a0001c0001t0002g0247 a0001c0001t0002g0344 others(6): Show a0001c0001t0002g0218 a0001c0001t0002g0247 a0001c0001t0002g0344 a0001c0001t0003g0326 a0001c0001t0003g0329 a0001c0001t0003g0330 a0001c0001t0003g0387 a0001c0001t0003g0392 a0001c0001t0003g0394	9	402	0.0224	-22	c.168 others(38): Show c.168-1001_168-980delAATATATATATATATATATATA	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCMAP_chr1_24551087_24614328	24604605	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0365 a0001c0001t0003g0365	1	402	0.0025	-22	c.168 others(37): Show c.168-974_168-953delATATATATATATATATATATAT	NCMAP	ENSG00000184454.7	transcript	ENST00000374392.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
NCOA1_chr2_24486254_24775702	24552339	ATATATAT others(15): Show ATATATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0055 a0001c0002t0003g0055	1	314	0.0032	-22	c.-39 others(43): Show c.-395-11954_-395-11933delATATATATATATATTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552341	ATATATAT others(15): Show ATATATATATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 NA18946.hp1 NA18952.hp1 others(2): Show HG01261.hp2 NA18946.hp1 NA18952.hp1 NA18957.hp2 NA19058.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0036 a0001c0002t0003g0037 a0001c0002t0003g0046 others(2): Show a0001c0002t0003g0036 a0001c0002t0003g0037 a0001c0002t0003g0046 a0001c0002t0003g0049 a0001c0002t0003g0054	5	314	0.0159	-22	c.-39 others(43): Show c.-395-11952_-395-11931delATATATATATATTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24552343	ATATATAT others(15): Show ATATATATATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18966.hp1 NA18988.hp1 others(1): Show NA18944.hp1 NA18966.hp1 NA18988.hp1 NA19065.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0001 a0001c0002t0003	a0001c0002t0001g0066 a0001c0002t0003g0035 a0001c0002t0003g0057 others(1): Show a0001c0002t0001g0066 a0001c0002t0003g0035 a0001c0002t0003g0057 a0001c0002t0003g0059	4	314	0.0127	-22	c.-39 others(43): Show c.-395-11950_-395-11929delATATATATATTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24576149	GTTTTTTT others(15): Show GTTTTTTTTTTTTTGTTTTTTGT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00621.hp1 HG00673.hp2 others(38): Show HG00438.hp1 HG00621.hp1 HG00673.hp2 HG02004.hp2 HG02027.hp2 HG02074.hp2 HG02080.hp2 HG02132.hp2 HG02300.hp1 HG03669.hp2 NA18612.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp2 NA18945.hp1 NA18948.hp1 NA18959.hp2 NA18960.hp2 NA18963.hp2 NA18966.hp2 NA18973.hp1 NA18975.hp1 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp2 NA18986.hp1 NA18994.hp2 NA18998.hp1 NA19001.hp2 NA19003.hp1 NA19005.hp2 NA19006.hp1 NA19011.hp2 NA19043.hp2 NA19057.hp1 NA19058.hp2 NA19083.hp2 NA19085.hp2 NA19088.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0014 a0003c0009 others(1): Show a0001c0001 a0001c0014 a0003c0009 a0004c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0014t0001 a0003c0009t0001 a0004c0010t0001	a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 others(38): Show a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0174 a0001c0001t0004g0169 a0001c0001t0005g0141 a0001c0001t0005g0148 a0001c0001t0005g0152 a0001c0014t0001g0173 a0003c0009t0001g0149 a0004c0010t0001g0145	41	314	0.1306	-22	c.-25 others(41): Show c.-259-8313_-259-8292delGTTTTTTGTTTTTTTTTTTTTT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24589648	TGTGTGTG others(15): Show TGTGTGTGTGTGTGTGTATGAAA	T T	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03579.hp1 HG03453.hp2 HG03579.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0012 a0001c0005t0012	a0001c0005t0012g0081 a0001c0005t0012g0082 a0001c0005t0012g0081 a0001c0005t0012g0082	2	314	0.0064	-22	c.-17 others(41): Show c.-175+5101_-175+5122delGTGTATGAAAGTGTGTGTGTGT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24639912	GTGTGTAT others(15): Show GTGTGTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00621.hp1 HG00673.hp2 others(42): Show HG00438.hp1 HG00621.hp1 HG00673.hp2 HG01261.hp1 HG02004.hp2 HG02027.hp2 HG02074.hp2 HG02080.hp2 HG02132.hp2 HG02300.hp1 HG02818.hp2 HG02886.hp2 HG03654.hp2 HG03669.hp2 HG04184.hp1 NA18612.hp1 NA18940.hp1 NA18942.hp2 NA18945.hp1 NA18948.hp1 NA18950.hp2 NA18959.hp2 NA18960.hp2 NA18963.hp2 NA18966.hp2 NA18973.hp1 NA18975.hp1 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp2 NA18986.hp1 NA18991.hp2 NA18994.hp2 NA18998.hp1 NA19001.hp2 NA19003.hp1 NA19005.hp2 NA19006.hp1 NA19011.hp2 NA19057.hp1 NA19058.hp2 NA19085.hp2 NA19088.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0014 a0003c0009 others(1): Show a0001c0001 a0001c0014 a0003c0009 a0004c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0014t0001 a0003c0009t0001 a0004c0010t0001	a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 others(42): Show a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0174 a0001c0001t0004g0210 a0001c0001t0005g0141 a0001c0001t0005g0148 a0001c0001t0005g0152 a0001c0001t0007g0001 a0001c0001t0007g0002 a0001c0001t0007g0003 a0001c0014t0001g0173 a0003c0009t0001g0149 a0004c0010t0001g0145	45	314	0.1433	-22	c.-17 others(41): Show c.-174-4052_-174-4031delGTGTATATATATATATATATAT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24639916	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0087 a0001c0001t0002g0087	1	314	0.0032	-22	c.-17 others(41): Show c.-174-4016_-174-3995delATATATATATATATATATATAT	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA1_chr2_24486254_24775702	24725714	CGTGTGTG others(15): Show CGTGTGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01081.hp2 HG01257.hp2 others(53): Show HG00408.hp1 HG01081.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01884.hp1 HG01891.hp1 HG01952.hp1 HG02040.hp2 HG02074.hp1 HG02451.hp1 HG02451.hp2 HG02615.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02735.hp2 HG02886.hp1 HG03017.hp1 HG03098.hp2 HG03239.hp2 HG03453.hp1 HG03486.hp2 HG03710.hp2 HG04228.hp1 NA18944.hp1 NA18946.hp1 NA18952.hp1 NA18955.hp2 NA18957.hp2 NA18966.hp1 NA18973.hp2 NA18977.hp1 NA18979.hp2 NA18982.hp1 NA18988.hp1 NA18990.hp2 NA18991.hp1 NA18993.hp1 NA18998.hp2 NA19002.hp1 NA19005.hp1 NA19011.hp1 NA19030.hp2 NA19043.hp1 NA19058.hp1 NA19063.hp1 NA19065.hp1 NA19078.hp2 NA19079.hp2 NA19088.hp2 NA19091.hp1 NA20129.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0006 others(5): Show a0001c0002t0001 a0001c0002t0003 a0001c0002t0006 a0001c0002t0009 a0001c0002t0010 a0001c0002t0019 a0001c0002t0023 a0001c0002t0024	a0001c0002t0001g0029 a0001c0002t0001g0060 a0001c0002t0001g0062 others(53): Show a0001c0002t0001g0029 a0001c0002t0001g0060 a0001c0002t0001g0062 a0001c0002t0001g0064 a0001c0002t0001g0066 a0001c0002t0003g0030 a0001c0002t0003g0031 a0001c0002t0003g0032 a0001c0002t0003g0033 a0001c0002t0003g0034 a0001c0002t0003g0035 a0001c0002t0003g0036 a0001c0002t0003g0037 a0001c0002t0003g0038 a0001c0002t0003g0039 a0001c0002t0003g0040 a0001c0002t0003g0041 a0001c0002t0003g0042 a0001c0002t0003g0043 a0001c0002t0003g0044 a0001c0002t0003g0045 a0001c0002t0003g0046 a0001c0002t0003g0047 a0001c0002t0003g0048 a0001c0002t0003g0049 a0001c0002t0003g0050 a0001c0002t0003g0051 a0001c0002t0003g0053 a0001c0002t0003g0054 a0001c0002t0003g0055 a0001c0002t0003g0056 a0001c0002t0003g0057 a0001c0002t0003g0059 a0001c0002t0003g0061 a0001c0002t0003g0063 a0001c0002t0003g0065 a0001c0002t0003g0067 a0001c0002t0003g0068 a0001c0002t0003g0314 a0001c0002t0006g0115 a0001c0002t0006g0116 a0001c0002t0006g0117 a0001c0002t0006g0118 a0001c0002t0006g0119 a0001c0002t0006g0120 a0001c0002t0006g0121 a0001c0002t0006g0123 a0001c0002t0009g0084 a0001c0002t0009g0085 a0001c0002t0009g0086 a0001c0002t0010g0213 a0001c0002t0010g0214 a0001c0002t0010g0215 a0001c0002t0019g0058 a0001c0002t0023g0052 a0001c0002t0024g0122	56	314	0.1783	-22	c.260 others(39): Show c.2600-859_2600-838delTGTGTGTGTGTGTGTGTGTGTG	NCOA1	ENSG00000084676.16	transcript	ENST00000348332.8	protein_coding	14/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
NCOA2_chr8_70104782_70408808	70212066	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0009 a0009	a0009c0011 a0009c0011	a0009c0011t0001 a0009c0011t0001	a0009c0011t0001g0071 a0009c0011t0001g0071	1	322	0.0031	-22	c.259 others(39): Show c.259+1815_259+1836delATATATATATATATATATATAT	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	4/22			chr8	TogoVar
NCOA2_chr8_70104782_70408808	70373093	GTGGACAT others(15): Show GTGGACATGTGCTTACATTCCTA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02886.hp1 HG03195.hp1 others(3): Show HG01109.hp1 HG02886.hp1 HG03195.hp1 NA18522.hp2 NA18906.hp1 NA19043.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0007 a0001c0004t0007g0043 a0001c0004t0007g0044 others(3): Show a0001c0004t0007g0007 a0001c0004t0007g0043 a0001c0004t0007g0044 a0001c0004t0007g0045 a0001c0004t0007g0046 a0001c0004t0007g0047	6	322	0.0186	-22	c.-77 others(41): Show c.-77+30585_-77+30606delTAGGAATGTAAGCACATGTCCA	NCOA2	ENSG00000140396.13	transcript	ENST00000452400.7	protein_coding	1/22			chr8	TogoVar
NCOA4_chr10_46000088_46035623	46012066	GAAAGAAA others(15): Show GAAAGAAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03688.hp2 NA19007.hp2 HG02922.hp2 HG03688.hp2 NA19007.hp2	a0002 a0009 a0002 a0009	a0002c0004 a0009c0010 a0002c0004 a0009c0010	a0002c0004t0005 a0009c0010t0011 a0002c0004t0005 a0009c0010t0011	a0002c0004t0005g0112 a0002c0004t0005g0113 a0009c0010t0011g0115 a0002c0004t0005g0112 a0002c0004t0005g0113 a0009c0010t0011g0115	3	412	0.0073	-22	c.714 others(37): Show c.714+795_714+816delTTTTTTTTTTTTTTTTTTCTTT	NCOA4	ENSG00000266412.6	transcript	ENST00000581486.6	protein_coding	7/9			chr10	TogoVar
NCOA7_chr6_125785960_125937034	125840868	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0014 a0002c0002t0014	a0002c0002t0014g0014 a0002c0002t0014g0014	1	270	0.0037	-22	c.51- others(39): Show c.51-14131_51-14110delTTTTTTTTTTTTTTTTTTTTTT	NCOA7	ENSG00000111912.20	transcript	ENST00000392477.7	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr6	TogoVar
NCOR2_chr12_124319415_124572612	124439514	GAGAGAGA others(15): Show GAGAGAGACGGAGACAGAGACCC	G G	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02965.hp2 HG02572.hp1 HG02965.hp2	a0016 a0023 a0016 a0023	a0016c0155 a0023c0157 a0016c0155 a0023c0157	a0016c0155t0001 a0023c0157t0001 a0016c0155t0001 a0023c0157t0001	a0016c0155t0001g0135 a0023c0157t0001g0131 a0016c0155t0001g0135 a0023c0157t0001g0131	2	234	0.0086	-22	c.816 others(39): Show c.816-1540_816-1519delGGGTCTCTGTCTCCGTCTCTCT	NCOR2	ENSG00000196498.15	transcript	ENST00000405201.6	protein_coding	9/48			chr12	TogoVar
NCOR2_chr12_124319415_124572612	124541794	GTGGATAT others(15): Show GTGGATATGGAGGGGGATGGGGA	G G	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0029 a0004c0010t0029	a0004c0010t0029g0087 a0004c0010t0029g0087	1	234	0.0043	-22	c.-16 others(41): Show c.-164-6205_-164-6184delTCCCCATCCCCCTCCATATCCA	NCOR2	ENSG00000196498.15	transcript	ENST00000405201.6	protein_coding	1/48			chr12	TogoVar
NCR1_chr19_54901148_54918073	54903350	GCATATAT others(15): Show GCATATATACATACATGTATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02280.hp2 others(8): Show HG01243.hp2 HG02055.hp2 HG02280.hp2 HG02451.hp1 HG02809.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03098.hp2 HG03579.hp1 NA18522.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0005 a0001c0003t0007 a0001c0003t0004 a0001c0003t0005 a0001c0003t0007	a0001c0003t0004g0036 a0001c0003t0004g0119 a0001c0003t0004g0120 others(4): Show a0001c0003t0004g0036 a0001c0003t0004g0119 a0001c0003t0004g0120 a0001c0003t0005g0208 a0001c0003t0007g0035 a0001c0003t0007g0205 a0001c0003t0007g0206	11	457	0.0241	-22	c.-28 others(33): Show c.-2837_-2816delCATATATACATACATGTATATA	NCR1	ENSG00000189430.13	transcript	ENST00000291890.9	protein_coding		2797		chr19	TogoVar

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