Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTPRG_chr3_61556571_62302609	61866582	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01071.hp1 HG02027.hp2 others(13): Show HG00735.hp1 HG01071.hp1 HG02027.hp2 HG02040.hp1 HG02258.hp1 HG02559.hp1 HG02647.hp2 HG02723.hp2 HG02896.hp2 HG02922.hp2 HG02965.hp1 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03453.hp2 NA18522.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0009	a0001c0001 a0001c0005 a0001c0008 others(4): Show a0001c0001 a0001c0005 a0001c0008 a0001c0016 a0002c0003 a0003c0004 a0009c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0005t0001 a0001c0005t0017 a0001c0008t0005 a0001c0016t0001 a0002c0003t0001 a0002c0003t0002 a0003c0004t0002 a0003c0004t0007 a0009c0018t0006	a0001c0001t0001g0001 a0001c0001t0001g0044 a0001c0001t0001g0072 others(13): Show a0001c0001t0001g0001 a0001c0001t0001g0044 a0001c0001t0001g0072 a0001c0001t0002g0062 a0001c0001t0002g0093 a0001c0001t0006g0037 a0001c0001t0007g0083 a0001c0005t0001g0014 a0001c0005t0017g0038 a0001c0008t0005g0030 a0001c0016t0001g0059 a0002c0003t0001g0067 a0002c0003t0002g0061 a0003c0004t0002g0071 a0003c0004t0007g0076 a0009c0018t0006g0039	16	94	0.1702	-22	c.190 others(43): Show c.190+117615_190+117636delTTTTTTTTTTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61887119	CATGCATA others(15): Show CATGCATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0008 a0003c0004t0003g0008	1	94	0.0106	-22	c.191 others(43): Show c.191-102503_191-102482delGCATATATATATATATATATAT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62092063	GACACACA others(15): Show GACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01071.hp1 HG01169.hp2 others(10): Show HG00639.hp1 HG01071.hp1 HG01169.hp2 HG02027.hp1 HG02040.hp2 HG02109.hp1 HG02559.hp1 HG02922.hp1 HG03130.hp1 HG03130.hp2 HG03831.hp1 HG04199.hp1 NA18522.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0008 a0009	a0001c0001 a0002c0003 a0003c0004 others(2): Show a0001c0001 a0002c0003 a0003c0004 a0008c0017 a0009c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0002c0003t0002 a0002c0003t0008 a0003c0004t0001 a0008c0017t0002 a0009c0018t0006	a0001c0001t0001g0009 a0001c0001t0001g0073 a0001c0001t0002g0050 others(10): Show a0001c0001t0001g0009 a0001c0001t0001g0073 a0001c0001t0002g0050 a0001c0001t0002g0062 a0001c0001t0002g0093 a0001c0001t0007g0083 a0002c0003t0002g0061 a0002c0003t0008g0016 a0003c0004t0001g0002 a0003c0004t0001g0048 a0003c0004t0001g0070 a0008c0017t0002g0013 a0009c0018t0006g0039	13	94	0.1383	-22	c.615 others(41): Show c.615+13851_615+13872delCACACACACACACACACACACA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	5/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRM_chr18_7562316_8411856	7948130	TACACACA others(15): Show TACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0004 a0001c0006t0004	a0001c0006t0004g0070 a0001c0006t0004g0070	1	80	0.0125	-22	c.664 others(39): Show c.664-1025_664-1004delCACACACACACACACACACACA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	5/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8125976	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0050 a0001c0002t0001g0050	1	80	0.0125	-22	c.216 others(43): Show c.2167+11180_2167+11201delATATATATATATATATATATAT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	13/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8240641	GAGAGAGA others(15): Show GAGAGAGAGAGAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02109.hp1 HG02109.hp2 others(13): Show HG01884.hp1 HG02109.hp1 HG02109.hp2 HG02280.hp1 HG02451.hp1 HG02630.hp1 HG02723.hp2 HG02965.hp2 HG03130.hp2 HG03225.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp1 NA18522.hp1 NA18522.hp2 NA18959.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0008 a0002c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 a0001c0004t0001 a0001c0004t0002 a0001c0005t0002 a0001c0008t0001 a0001c0008t0002 a0002c0007t0001	a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0002g0037 others(13): Show a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0002g0037 a0001c0001t0003g0077 a0001c0002t0001g0015 a0001c0002t0001g0050 a0001c0003t0001g0041 a0001c0003t0002g0022 a0001c0003t0002g0033 a0001c0004t0001g0055 a0001c0004t0002g0021 a0001c0005t0002g0043 a0001c0008t0001g0080 a0001c0008t0002g0025 a0002c0007t0001g0010 a0002c0007t0001g0054	16	80	0.2000	-22	c.230 others(41): Show c.2301-3413_2301-3392delGAGAGAGAGAAAGAAAGAAAGA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8240806	GAGAGAGA others(15): Show GAGAGAGAGAGAGAGAGAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02280.hp1 HG02965.hp2 others(6): Show HG01106.hp2 HG02280.hp1 HG02965.hp2 HG03130.hp2 HG03225.hp1 HG03453.hp2 HG03516.hp1 NA18522.hp2 NA18959.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008 a0001c0019 a0002c0007	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(5): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 a0001c0008t0001 a0001c0008t0002 a0001c0019t0001 a0002c0007t0001	a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0002t0001g0015 others(6): Show a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0002t0001g0015 a0001c0003t0001g0041 a0001c0003t0002g0033 a0001c0008t0001g0080 a0001c0008t0002g0025 a0001c0019t0001g0006 a0002c0007t0001g0010	9	80	0.1125	-22	c.230 others(41): Show c.2301-3248_2301-3227delGAGAGAGAGAGAGAGAGAAAGA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRO_chr12_15317508_15603331	15513136	GAAGGAAG others(15): Show GAAGGAAGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0065 a0001c0002t0002g0065	1	164	0.0061	-22	c.146 others(41): Show c.1465-2358_1465-2337delGAAGAAAGAAAGAAAGAAAAAG	PTPRO	ENSG00000151490.15	transcript	ENST00000281171.9	protein_coding	7/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRO_chr12_15317508_15603331	15513140	GAAGAAAG others(15): Show GAAGAAAGAAAGAAAGAAAAAGA	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0116 a0001c0002t0003g0116	1	164	0.0061	-22	c.146 others(41): Show c.1465-2339_1465-2318delAAGAAAGAAAGAAAGAAAGAAA	PTPRO	ENSG00000151490.15	transcript	ENST00000281171.9	protein_coding	7/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRQ_chr12_80439235_80685273	80552645	TTATATAT others(15): Show TTATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02559.hp2 HG02818.hp2 HG02280.hp2 HG02559.hp2 HG02818.hp2	a0044 a0063 a0067 a0044 a0063 a0067	a0044c0031 a0063c0057 a0067c0062 a0044c0031 a0063c0057 a0067c0062	a0044c0031t0004 a0063c0057t0005 a0067c0062t0004 a0044c0031t0004 a0063c0057t0005 a0067c0062t0004	a0044c0031t0004g0026 a0063c0057t0005g0134 a0067c0062t0004g0151 a0044c0031t0004g0026 a0063c0057t0005g0134 a0067c0062t0004g0151	3	178	0.0169	-22	c.428 others(41): Show c.4285+2939_4285+2960delATATATATATATATATATATAT	PTPRQ	ENSG00000139304.16	transcript	ENST00000644991.3	protein_coding	25/44		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRR_chr12_70633079_70925738	70729925	CTAATGTC others(15): Show CTAATGTCATTTGATATTTTTCA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00280.hp1 others(126): Show HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00735.hp1 HG00735.hp2 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01496.hp2 HG01884.hp1 HG01943.hp1 HG01943.hp2 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp1 HG02135.hp2 HG02451.hp2 HG02486.hp2 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02896.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03139.hp2 HG03225.hp2 HG03453.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03579.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18941.hp1 NA18941.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18957.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18968.hp2 NA18975.hp1 NA18975.hp2 NA18992.hp1 NA18992.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19030.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19078.hp1 NA19078.hp2 NA19085.hp1 NA19085.hp2 NA19088.hp1 NA19088.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0006 a0010 a0011 a0012 a0013 a0014 a0016	a0001c0001 a0001c0004 a0002c0002 others(10): Show a0001c0001 a0001c0004 a0002c0002 a0003c0003 a0004c0005 a0004c0022 a0006c0007 a0010c0020 a0011c0014 a0012c0019 a0013c0018 a0014c0017 a0016c0015	a0001c0001t0001 a0001c0001t0005 a0001c0004t0001 others(12): Show a0001c0001t0001 a0001c0001t0005 a0001c0004t0001 a0002c0002t0001 a0002c0002t0004 a0003c0003t0001 a0004c0005t0001 a0004c0022t0001 a0006c0007t0001 a0010c0020t0002 a0011c0014t0001 a0012c0019t0001 a0013c0018t0001 a0014c0017t0001 a0016c0015t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(126): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0036 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0101 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0005g0204 a0001c0004t0001g0042 a0001c0004t0001g0135 a0001c0004t0001g0169 a0001c0004t0001g0180 a0002c0002t0001g0028 a0002c0002t0001g0097 a0002c0002t0001g0142 a0002c0002t0001g0155 a0002c0002t0001g0175 a0002c0002t0001g0186 a0002c0002t0004g0203 a0003c0003t0001g0037 a0003c0003t0001g0038 a0003c0003t0001g0099 a0003c0003t0001g0138 a0003c0003t0001g0196 a0004c0005t0001g0013 a0004c0005t0001g0039 a0004c0005t0001g0092 a0004c0005t0001g0150 a0004c0005t0001g0166 a0004c0022t0001g0057 a0006c0007t0001g0074 a0006c0007t0001g0083 a0006c0007t0001g0084 a0006c0007t0001g0090 a0010c0020t0002g0137 a0011c0014t0001g0005 a0012c0019t0001g0021 a0013c0018t0001g0088 a0014c0017t0001g0052 a0016c0015t0001g0191	129	204	0.6324	-22	c.100 others(43): Show c.1007+15871_1007+15892delTGAAAAATATCAAATGACATTA	PTPRR	ENSG00000153233.13	transcript	ENST00000283228.7	protein_coding	6/13			chr12	TogoVar
PTPRT_chr20_42067756_43194906	42274536	AGTGTGTG others(15): Show AGTGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01496.hp1 HG01257.hp1 HG01496.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0003 a0002c0001t0002 a0002c0001t0003	a0002c0001t0002g0011 a0002c0001t0003g0008 a0002c0001t0002g0011 a0002c0001t0003g0008	2	62	0.0323	-22	c.217 others(41): Show c.2176+7931_2176+7952delACACACACACACACACACACAC	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	13/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42276496	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02965.hp2 HG03209.hp1 HG02897.hp2 HG02965.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0008 a0001c0026 a0002c0013 a0001c0008 a0001c0026 a0002c0013	a0001c0008t0005 a0001c0026t0007 a0002c0013t0001 a0001c0008t0005 a0001c0026t0007 a0002c0013t0001	a0001c0008t0005g0037 a0001c0026t0007g0059 a0002c0013t0001g0016 a0001c0008t0005g0037 a0001c0026t0007g0059 a0002c0013t0001g0016	3	62	0.0484	-22	c.217 others(41): Show c.2176+5971_2176+5992delATATATATATATATATATATAT	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	13/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42278073	CTATATAT others(15): Show CTATATATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0008 a0003c0006t0008	a0003c0006t0008g0054 a0003c0006t0008g0054	1	62	0.0161	-22	c.217 others(41): Show c.2176+4394_2176+4415delTATATATATATATATATATATA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	13/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42409481	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00438.hp2 others(13): Show HG00140.hp1 HG00438.hp1 HG00438.hp2 HG00738.hp1 HG01109.hp1 HG01496.hp1 HG01496.hp2 HG02155.hp2 HG02280.hp1 HG02622.hp1 HG02897.hp2 HG02922.hp1 HG03017.hp1 HG03017.hp2 HG03195.hp2 NA19030.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0003 a0001c0021 others(6): Show a0001c0002 a0001c0003 a0001c0021 a0001c0026 a0001c0031 a0002c0001 a0002c0004 a0002c0005 a0003c0006	a0001c0002t0003 a0001c0002t0014 a0001c0003t0004 others(13): Show a0001c0002t0003 a0001c0002t0014 a0001c0003t0004 a0001c0021t0001 a0001c0026t0007 a0001c0031t0001 a0002c0001t0003 a0002c0001t0010 a0002c0001t0019 a0002c0001t0026 a0002c0004t0002 a0002c0004t0004 a0002c0004t0010 a0002c0004t0024 a0002c0005t0012 a0003c0006t0009	a0001c0002t0003g0040 a0001c0002t0014g0052 a0001c0003t0004g0041 others(13): Show a0001c0002t0003g0040 a0001c0002t0014g0052 a0001c0003t0004g0041 a0001c0021t0001g0053 a0001c0026t0007g0059 a0001c0031t0001g0056 a0002c0001t0003g0008 a0002c0001t0010g0024 a0002c0001t0019g0023 a0002c0001t0026g0012 a0002c0004t0002g0007 a0002c0004t0004g0026 a0002c0004t0010g0027 a0002c0004t0024g0006 a0002c0005t0012g0010 a0003c0006t0009g0051	16	62	0.2581	-22	c.156 others(43): Show c.1560+38717_1560+38738delTTTTTTTTTTTTTTTTTTTTTT	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	9/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42489008	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0004 a0004	a0004c0020 a0004c0020	a0004c0020t0016 a0004c0020t0016	a0004c0020t0016g0029 a0004c0020t0016g0029	1	62	0.0161	-22	c.115 others(43): Show c.1154-16468_1154-16447delCACACACACACACACACACACA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	7/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42502405	AACACACA others(15): Show AACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0008 a0003c0006t0008	a0003c0006t0008g0054 a0003c0006t0008g0054	1	62	0.0161	-22	c.115 others(43): Show c.1154-29865_1154-29844delGTGTGTGTGTGTGTGTGTGTGT	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	7/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42686457	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02896.hp1 HG02976.hp2 others(1): Show HG00738.hp2 HG02896.hp1 HG02976.hp2 HG03209.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0008 a0001c0025 a0002c0011 others(1): Show a0001c0008 a0001c0025 a0002c0011 a0006c0019	a0001c0008t0005 a0001c0025t0015 a0002c0011t0006 others(1): Show a0001c0008t0005 a0001c0025t0015 a0002c0011t0006 a0006c0019t0008	a0001c0008t0005g0037 a0001c0025t0015g0028 a0002c0011t0006g0003 others(1): Show a0001c0008t0005g0037 a0001c0025t0015g0028 a0002c0011t0006g0003 a0006c0019t0008g0050	4	62	0.0645	-22	c.860 others(39): Show c.860-8320_860-8299delAAAAAAAAAAAAAAAAAAAAAA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	6/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42915045	CTAAGGAG others(15): Show CTAAGGAGGGAAAAAGATATAAT	C C	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03195.hp2 HG03471.hp1 others(1): Show HG02922.hp2 HG03195.hp2 HG03471.hp1 HG03540.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0002c0004 a0002c0009 others(1): Show a0001c0002 a0002c0004 a0002c0009 a0005c0028	a0001c0002t0003 a0002c0004t0002 a0002c0009t0001 others(1): Show a0001c0002t0003 a0002c0004t0002 a0002c0009t0001 a0005c0028t0027	a0001c0002t0003g0040 a0002c0004t0002g0005 a0002c0009t0001g0018 others(1): Show a0001c0002t0003g0040 a0002c0004t0002g0005 a0002c0009t0001g0018 a0005c0028t0027g0042	4	62	0.0645	-22	c.89- others(39): Show c.89-29135_89-29114delATTATATCTTTTTCCCTCCTTA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	43057292	GGGAGGGG others(15): Show GGGAGGGGGGAAGGAATGGAGGA	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02976.hp2 HG02896.hp2 HG02897.hp1 HG02976.hp2	a0002 a0006 a0002 a0006	a0002c0001 a0006c0019 a0002c0001 a0006c0019	a0002c0001t0011 a0006c0019t0008 a0002c0001t0011 a0006c0019t0008	a0002c0001t0011g0019 a0002c0001t0011g0020 a0006c0019t0008g0050 a0002c0001t0011g0019 a0002c0001t0011g0020 a0006c0019t0008g0050	3	62	0.0484	-22	c.88+ others(41): Show c.88+132332_88+132353delTCCTCCATTCCTTCCCCCCTCC	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	43140443	AGTGTGTG others(15): Show AGTGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 NA19240.hp1 HG01261.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0027 a0002c0004 a0001c0027 a0002c0004	a0001c0027t0028 a0002c0004t0002 a0001c0027t0028 a0002c0004t0002	a0001c0027t0028g0049 a0002c0004t0002g0001 a0001c0027t0028g0049 a0002c0004t0002g0001	2	62	0.0323	-22	c.88+ others(39): Show c.88+49181_88+49202delACACACACACACACACACACAC	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30			chr20	TogoVar
PTPRZ1_chr7_121868161_122067036	122040729	CGTGTGTG others(15): Show CGTGTGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02257.hp2 HG02280.hp1 others(3): Show HG00639.hp2 HG02257.hp2 HG02280.hp1 HG02622.hp1 HG02970.hp1 HG03579.hp1	a0001 a0004 a0007 others(2): Show a0001 a0004 a0007 a0016 a0021	a0001c0001 a0004c0008 a0007c0037 others(2): Show a0001c0001 a0004c0008 a0007c0037 a0016c0029 a0021c0017	a0001c0001t0005 a0004c0008t0004 a0007c0037t0006 others(2): Show a0001c0001t0005 a0004c0008t0004 a0007c0037t0006 a0016c0029t0002 a0021c0017t0003	a0001c0001t0005g0029 a0004c0008t0004g0009 a0004c0008t0004g0019 others(3): Show a0001c0001t0005g0029 a0004c0008t0004g0009 a0004c0008t0004g0019 a0007c0037t0006g0211 a0016c0029t0002g0091 a0021c0017t0003g0182	6	312	0.0192	-22	c.563 others(37): Show c.5638-54_5638-33delGTGTGTGTGTGTGTGTGTGTGT	PTPRZ1	ENSG00000106278.12	transcript	ENST00000393386.7	protein_coding	20/29		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTTG1IP2_chr7_90464639_90518397	90472279	AACACACA others(15): Show AACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG03516.hp1 HG02895.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0070 a0001c0001t0001g0071	2	384	0.0052	-22	c.145 others(39): Show c.145+2369_145+2390delACACACACACACACACACACAC	PTTG1IP2	ENSG00000251154.2	transcript	ENST00000509356.2	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr7	TogoVar
PUM1_chr1_30926506_31070717	30942191	TTATATAT others(15): Show TTATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01168.hp2 HG01928.hp2 others(10): Show HG00738.hp2 HG01168.hp2 HG01928.hp2 HG01952.hp1 HG01981.hp1 HG02004.hp2 HG02148.hp1 HG02273.hp2 NA18953.hp1 NA18961.hp2 NA18982.hp1 NA19060.hp1 NA19064.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0010 a0001c0001 a0002c0010	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0002c0010t0003	a0001c0001t0002g0017 a0001c0001t0003g0097 a0001c0001t0003g0099 others(10): Show a0001c0001t0002g0017 a0001c0001t0003g0097 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0146 a0001c0001t0003g0161 a0001c0001t0003g0163 a0001c0001t0003g0165 a0001c0001t0003g0167 a0001c0001t0003g0214 a0001c0001t0003g0217 a0001c0001t0008g0207 a0002c0010t0003g0216	13	334	0.0389	-22	c.299 others(37): Show c.2995-90_2995-69delTATATATATATATATATATATA	PUM1	ENSG00000134644.16	transcript	ENST00000426105.7	protein_coding	18/21			chr1	TogoVar
PUM3_chr9_2799152_2849095	2835730	AGTACATT others(15): Show AGTACATTTATCAGTGTGGGGGT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0074 a0001c0005t0001g0074	1	420	0.0024	-22	c.304 others(39): Show c.304+1428_304+1449delACCCCCACACTGATAAATGTAC	PUM3	ENSG00000080608.10	transcript	ENST00000397885.3	protein_coding	3/17			chr9	TogoVar
PUS3_chr11_125888485_125908206	125902748	AGCAATCG others(15): Show AGCAATCGTGGTCTGTATGTAAG	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0009 a0009	a0009c0013 a0009c0013	a0009c0013t0008 a0009c0013t0008	a0009c0013t0008g0061 a0009c0013t0008g0061	1	450	0.0022	-22	c.-47 others(37): Show c.-47+400_-47+421delCTTACATACAGACCACGATTGC	PUS3	ENSG00000110060.9	transcript	ENST00000227474.8	protein_coding	1/3			chr11	TogoVar
PUSL1_chr1_1303597_1316677	1315807	AGGGGCAG others(15): Show AGGGGCAGGGAGTGAGGGGGGCG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG01099.hp1 HG02258.hp1 others(10): Show HG00642.hp2 HG01099.hp1 HG02258.hp1 HG02717.hp1 HG02895.hp1 HG02965.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03225.hp1 NA18522.hp1 NA18522.hp2 NA19030.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0001 a0003c0003 a0008c0011 a0001c0001 a0003c0003 a0008c0011	a0001c0001t0001 a0003c0003t0001 a0008c0011t0001 a0001c0001t0001 a0003c0003t0001 a0008c0011t0001	a0001c0001t0001g0014 a0003c0003t0001g0006 a0003c0003t0001g0009 others(4): Show a0001c0001t0001g0014 a0003c0003t0001g0006 a0003c0003t0001g0009 a0003c0003t0001g0010 a0003c0003t0001g0032 a0003c0003t0001g0033 a0008c0011t0001g0019	13	352	0.0369	-22	c.44 others(33): Show c.4429_*4450delGGGGCAGGGAGTGAGGGGGGCG	PUSL1	ENSG00000169972.13	transcript	ENST00000379031.10	protein_coding		4131		chr1	TogoVar
PXDNL_chr8_51314577_51814445	51578000	AGGAAGGA others(15): Show AGGAAGGAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0037 a0004c0004t0001g0037	1	122	0.0082	-22	c.308 others(41): Show c.308+14605_308+14626delCCTTCCTTCCTTCCTTCCTTCC	PXDNL	ENSG00000147485.13	transcript	ENST00000356297.5	protein_coding	3/22			chr8	TogoVar
PXDNL_chr8_51314577_51814445	51644388	ATGTGTAT others(15): Show ATGTGTATATATATACACATGTG	A A	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02451.hp2 HG02922.hp1 others(4): Show HG02257.hp1 HG02451.hp2 HG02922.hp1 HG03130.hp2 HG03209.hp1 NA18956.hp2 NA19086.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0011 a0019	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0011c0017 a0019c0047	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 others(2): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0011c0017t0001 a0019c0047t0001	a0001c0001t0001g0025 a0001c0001t0001g0072 a0002c0002t0001g0028 others(4): Show a0001c0001t0001g0025 a0001c0001t0001g0072 a0002c0002t0001g0028 a0002c0002t0001g0071 a0003c0003t0001g0021 a0011c0017t0001g0075 a0019c0047t0001g0074	7	122	0.0574	-22	c.236 others(41): Show c.236+10279_236+10300delCACATGTGTATATATATACACA	PXDNL	ENSG00000147485.13	transcript	ENST00000356297.5	protein_coding	2/22			chr8	TogoVar
PXDN_chr2_1626887_1749515	1658027	GCTCTCTC others(15): Show GCTCTCTCTCTCTCTCTCTCTCT	G G	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03195.hp1 HG02109.hp2 HG03195.hp1	a0001 a0001	a0001c0007 a0001c0028 a0001c0007 a0001c0028	a0001c0007t0006 a0001c0028t0001 a0001c0007t0006 a0001c0028t0001	a0001c0007t0006g0321 a0001c0028t0001g0150 a0001c0007t0006g0321 a0001c0028t0001g0150	2	322	0.0062	-22	c.183 others(41): Show c.1837+2832_1837+2853delAGAGAGAGAGAGAGAGAGAGAG	PXDN	ENSG00000130508.11	transcript	ENST00000252804.9	protein_coding	14/22			chr2	TogoVar
PXDN_chr2_1626887_1749515	1703903	AGGGCAAC others(15): Show AGGGCAACTCCAGGTGAAGGTGG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01993.hp1 HG02647.hp1 others(4): Show HG01109.hp1 HG01993.hp1 HG02647.hp1 HG02717.hp2 HG02809.hp1 HG02965.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0014 a0001c0039	a0001c0001t0002 a0001c0002t0003 a0001c0004t0004 others(3): Show a0001c0001t0002 a0001c0002t0003 a0001c0004t0004 a0001c0006t0013 a0001c0014t0013 a0001c0039t0006	a0001c0001t0002g0211 a0001c0002t0003g0131 a0001c0004t0004g0312 others(4): Show a0001c0001t0002g0211 a0001c0002t0003g0131 a0001c0004t0004g0312 a0001c0006t0013g0310 a0001c0014t0013g0145 a0001c0014t0013g0248 a0001c0039t0006g0045	7	322	0.0217	-22	c.201 others(41): Show c.201-10791_201-10770delCCACCTTCACCTGGAGTTGCCC	PXDN	ENSG00000130508.11	transcript	ENST00000252804.9	protein_coding	1/22			chr2	TogoVar
PXDN_chr2_1626887_1749515	1704261	GGGGGGAC others(15): Show GGGGGGACAGCTCCAGGTGAAGC	G G	intron_variant intron_variant	MODIFIER	HG03491.hp1 HG03492.hp2 HG03491.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0069 a0001c0001t0001g0070	2	322	0.0062	-22	c.201 others(41): Show c.201-11149_201-11128delGCTTCACCTGGAGCTGTCCCCC	PXDN	ENSG00000130508.11	transcript	ENST00000252804.9	protein_coding	1/22			chr2	TogoVar
PXDN_chr2_1626887_1749515	1704367	AGGGGGGG others(15): Show AGGGGGGGCAACTCCAGGTGAAG	A A	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0132 a0001c0001t0005g0132	1	322	0.0031	-22	c.201 others(41): Show c.201-11255_201-11234delCTTCACCTGGAGTTGCCCCCCC	PXDN	ENSG00000130508.11	transcript	ENST00000252804.9	protein_coding	1/22			chr2	TogoVar
PXK_chr3_58327892_58431127	58336053	ATATATAT others(15): Show ATATATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01175.hp1 HG01943.hp1 others(3): Show HG00733.hp2 HG01175.hp1 HG01943.hp1 HG01975.hp1 HG01981.hp1 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0006 a0001c0001t0001g0128 a0001c0001t0001g0129 others(3): Show a0001c0001t0001g0006 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0011g0130	6	300	0.0200	-22	c.102 others(39): Show c.102+2965_102+2986delATATATATATATATATATTTTT	PXK	ENSG00000168297.16	transcript	ENST00000356151.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
PXK_chr3_58327892_58431127	58336055	ATATATAT others(15): Show ATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG04228.hp2 NA20300.hp1 NA20905.hp1 HG04228.hp2 NA20300.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0127 a0001c0001t0001g0001 a0001c0001t0001g0127	3	300	0.0100	-22	c.102 others(39): Show c.102+2967_102+2988delATATATATATATATATTTTTTT	PXK	ENSG00000168297.16	transcript	ENST00000356151.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
PXYLP1_chr3_141226825_141299924	141235492	GGCCACTT others(15): Show GGCCACTTCAGATTGCAGCCATT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp2 HG00438.hp1 others(101): Show HG00140.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00642.hp1 HG00673.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01123.hp1 HG01123.hp2 HG01192.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01891.hp2 HG01943.hp1 HG01952.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02055.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02451.hp1 HG02486.hp1 HG02572.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02717.hp2 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03195.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03491.hp1 HG03516.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18747.hp2 NA18906.hp2 NA18941.hp2 NA18943.hp1 NA18946.hp1 NA18947.hp1 NA18948.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18959.hp1 NA18960.hp2 NA18963.hp2 NA18970.hp1 NA18985.hp2 NA18999.hp2 NA19005.hp1 NA19007.hp2 NA19009.hp2 NA19011.hp1 NA19012.hp2 NA19030.hp2 NA19060.hp2 NA19065.hp2 NA19074.hp1 NA19081.hp2 NA19086.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA21309.hp1	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0013 a0003c0012 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0002t0002 a0001c0002t0018 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0004 a0001c0003t0008 a0001c0003t0012 a0001c0004t0002 a0001c0004t0003 a0001c0007t0002 a0001c0013t0002 a0003c0012t0003 a0006c0009t0002	a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0018 others(92): Show a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0239 a0001c0001t0001g0241 a0001c0001t0001g0247 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0262 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0296 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0301 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0328 a0001c0001t0001g0358 a0001c0001t0002g0020 a0001c0001t0002g0272 a0001c0001t0002g0285 a0001c0001t0002g0292 a0001c0001t0002g0293 a0001c0001t0002g0294 a0001c0001t0002g0297 a0001c0001t0002g0300 a0001c0001t0002g0325 a0001c0001t0002g0329 a0001c0001t0002g0330 a0001c0001t0003g0240 a0001c0001t0003g0260 a0001c0001t0003g0263 a0001c0001t0003g0264 a0001c0001t0003g0283 a0001c0001t0003g0295 a0001c0001t0003g0307 a0001c0001t0003g0314 a0001c0001t0003g0317 a0001c0001t0003g0324 a0001c0001t0003g0326 a0001c0001t0004g0320 a0001c0001t0005g0284 a0001c0001t0005g0318 a0001c0001t0006g0261 a0001c0001t0006g0271 a0001c0001t0006g0306 a0001c0001t0006g0321 a0001c0001t0006g0327 a0001c0001t0010g0313 a0001c0002t0002g0015 a0001c0002t0018g0290 a0001c0003t0001g0017 a0001c0003t0001g0275 a0001c0003t0001g0281 a0001c0003t0001g0288 a0001c0003t0002g0002 a0001c0003t0002g0248 a0001c0003t0002g0279 a0001c0003t0002g0280 a0001c0003t0002g0286 a0001c0003t0002g0287 a0001c0003t0002g0302 a0001c0003t0002g0303 a0001c0003t0002g0304 a0001c0003t0002g0310 a0001c0003t0002g0322 a0001c0003t0003g0249 a0001c0003t0003g0265 a0001c0003t0004g0278 a0001c0003t0008g0233 a0001c0003t0008g0277 a0001c0003t0012g0276 a0001c0004t0002g0305 a0001c0004t0003g0309 a0001c0004t0003g0323 a0001c0007t0002g0282 a0001c0013t0002g0270 a0003c0012t0003g0308 a0006c0009t0002g0235	104	384	0.2708	-22	c.-54 others(39): Show c.-54+3591_-54+3612delGATTGCAGCCATTGCCACTTCA	PXYLP1	ENSG00000155893.13	transcript	ENST00000286353.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
PXYLP1_chr3_141226825_141299924	141248634	TACACACG others(15): Show TACACACGTGTATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0325 a0001c0001t0002g0325	1	384	0.0026	-22	c.-53 others(41): Show c.-53-11488_-53-11467delACACACGTGTATATATACACAC	PXYLP1	ENSG00000155893.13	transcript	ENST00000286353.9	protein_coding	1/5			chr3	TogoVar
PXYLP1_chr3_141226825_141299924	141268188	AGAGAGAG others(15): Show AGAGAGAGAGAGAGAGAGAGTGT	A A	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp2 NA19030.hp1 HG02559.hp2 HG03130.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0237 a0001c0001t0003g0244 a0001c0001t0003g0245 a0001c0001t0003g0237 a0001c0001t0003g0244 a0001c0001t0003g0245	3	384	0.0078	-22	c.79+ others(37): Show c.79+7936_79+7957delAGAGAGAGAGAGAGAGAGTGTG	PXYLP1	ENSG00000155893.13	transcript	ENST00000286353.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
PYGO1_chr15_55533884_55593345	55548707	TAAAAAAA others(15): Show TAAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG03017.hp2 NA19030.hp2 HG02080.hp1 HG03017.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0019 a0001c0001t0022 a0001c0001t0002 a0001c0001t0019 a0001c0001t0022	a0001c0001t0002g0305 a0001c0001t0019g0316 a0001c0001t0022g0090 a0001c0001t0002g0305 a0001c0001t0019g0316 a0001c0001t0022g0090	3	412	0.0073	-22	c.135 others(37): Show c.135+181_135+202delTTTTTTTTTTTTTTTTTTTTTT	PYGO1	ENSG00000171016.13	transcript	ENST00000563719.4	protein_coding	2/2			chr15	TogoVar
PYHIN1_chr1_158926552_158982059	158976868	CTATATAT others(15): Show CTATATATATATATATATATATA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02055.hp1 HG02145.hp2 HG02647.hp1 others(5): Show HG02055.hp1 HG02145.hp2 HG02647.hp1 HG02809.hp1 HG02818.hp2 HG02970.hp1 HG03453.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0004 a0001c0001t0021 a0001c0007t0004 a0001c0001t0004 a0001c0001t0021 a0001c0007t0004	a0001c0001t0004g0022 a0001c0001t0004g0101 a0001c0001t0004g0254 others(5): Show a0001c0001t0004g0022 a0001c0001t0004g0101 a0001c0001t0004g0254 a0001c0001t0004g0273 a0001c0001t0004g0336 a0001c0001t0004g0337 a0001c0001t0021g0362 a0001c0007t0004g0359	8	398	0.0201	-22	c.20 others(31): Show c.200_*221delTATATATATATATATATATATA	PYHIN1	ENSG00000163564.15	transcript	ENST00000368140.6	protein_coding	9/9	3129	INFO_REALIGN_3_PRIME	chr1	TogoVar
QRICH2_chr17_76269049_76313276	76301872	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0031 a0031	a0031c0041 a0031c0041	a0031c0041t0002 a0031c0041t0002	a0031c0041t0002g0025 a0031c0041t0002g0025	1	364	0.0028	-22	c.705 others(39): Show c.705+2521_705+2542delCACACACACACACACACACACA	QRICH2	ENSG00000129646.16	transcript	ENST00000680821.2	protein_coding	3/18			chr17	TogoVar
QTRT2_chr3_114051737_114093422	114082204	CCACACAC others(15): Show CCACACACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01109.hp2 HG01123.hp2 others(10): Show HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01257.hp1 HG01496.hp2 HG01884.hp2 HG02109.hp1 HG03225.hp1 HG03704.hp2 HG04115.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0018 a0001c0001t0003 a0001c0001t0018	a0001c0001t0003g0012 a0001c0001t0003g0022 a0001c0001t0003g0056 others(7): Show a0001c0001t0003g0012 a0001c0001t0003g0022 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0003g0058 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0018g0059	13	430	0.0302	-22	c.899 others(37): Show c.899-445_899-424delACACACACACACACACACACAC	QTRT2	ENSG00000151576.10	transcript	ENST00000281273.8	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
R3HCC1_chr8_23283108_23301279	23293798	CCTCCATT others(15): Show CCTCCATTGTACAGCTGGAGAGA	C C	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0041	1	472	0.0021	-22	c.109 others(39): Show c.1096+428_1096+449delCCATTGTACAGCTGGAGAGACT	R3HCC1	ENSG00000104679.12	transcript	ENST00000265806.12	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
RAB10_chr2_26029084_26142454	26079310	AACACACA others(15): Show AACACACACACACAAACACACAC	A A	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0212 a0001c0001t0009g0212	1	212	0.0047	-22	c.128 others(41): Show c.128-19338_128-19317delAACACACACACACACACACACA	RAB10	ENSG00000084733.11	transcript	ENST00000264710.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
RAB10_chr2_26029084_26142454	26092261	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01070.hp2 HG01074.hp2 others(7): Show HG00741.hp1 HG01070.hp2 HG01074.hp2 HG02257.hp1 HG02559.hp2 HG02647.hp2 HG02809.hp2 HG02886.hp2 HG03139.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0019 a0001c0001t0001g0163 a0001c0001t0002g0113 others(7): Show a0001c0001t0001g0019 a0001c0001t0001g0163 a0001c0001t0002g0113 a0001c0001t0002g0118 a0001c0001t0002g0123 a0001c0001t0002g0153 a0001c0001t0002g0157 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204	10	212	0.0472	-22	c.128 others(39): Show c.128-6361_128-6340delGTGTGTGTGTGTGTGTGTGTGT	RAB10	ENSG00000084733.11	transcript	ENST00000264710.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
RAB11FIP1_chr8_37853618_37904497	37895239	ATATATAT others(15): Show ATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0115 a0003c0003t0001g0115	1	264	0.0038	-22	c.371 others(39): Show c.371+3810_371+3831delAATATATATATATATATATATA	RAB11FIP1	ENSG00000156675.16	transcript	ENST00000330843.9	protein_coding	1/5			chr8	TogoVar
RAB11FIP1_chr8_37853618_37904497	37895241	ATATATAT others(15): Show ATATATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01081.hp1 HG00741.hp1 HG01081.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0006 a0003c0003t0001 a0001c0001t0006 a0003c0003t0001	a0001c0001t0006g0131 a0003c0003t0001g0132 a0001c0001t0006g0131 a0003c0003t0001g0132	2	264	0.0076	-22	c.371 others(39): Show c.371+3808_371+3829delAAAATATATATATATATATATA	RAB11FIP1	ENSG00000156675.16	transcript	ENST00000330843.9	protein_coding	1/5			chr8	TogoVar
RAB11FIP3_chr16_420649_528011	467614	GTCAGGGA others(15): Show GTCAGGGAGGAGGTGCTGGGGCC	G G	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01516.hp1 others(9): Show HG01069.hp1 HG01071.hp2 HG01516.hp1 HG01891.hp1 HG02055.hp2 HG02145.hp1 HG02630.hp2 HG02647.hp2 HG02818.hp1 HG03139.hp1 HG03579.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0010 a0001c0001t0011 others(4): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0021 a0001c0001t0023 a0001c0006t0032	a0001c0001t0001g0162 a0001c0001t0001g0203 a0001c0001t0010g0032 others(8): Show a0001c0001t0001g0162 a0001c0001t0001g0203 a0001c0001t0010g0032 a0001c0001t0010g0046 a0001c0001t0011g0110 a0001c0001t0012g0030 a0001c0001t0012g0031 a0001c0001t0012g0104 a0001c0001t0021g0001 a0001c0001t0023g0103 a0001c0006t0032g0270	12	295	0.0407	-22	c.809 others(39): Show c.809-3643_809-3622delTGGGGCCTCAGGGAGGAGGTGC	RAB11FIP3	ENSG00000090565.17	transcript	ENST00000262305.9	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
RAB11FIP4_chr17_31386675_31543211	31445562	ATATATAT others(15): Show ATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0309 a0001c0001t0001g0309	1	310	0.0032	-22	c.336 others(41): Show c.336+11442_336+11463delATATATATATATATATTTTTTT	RAB11FIP4	ENSG00000131242.18	transcript	ENST00000621161.5	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr17	TogoVar
RAB11FIP4_chr17_31386675_31543211	31445564	ATATATAT others(15): Show ATATATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03471.hp1 HG02922.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0025 a0001c0001t0010 a0001c0001t0025	a0001c0001t0010g0161 a0001c0001t0025g0210 a0001c0001t0010g0161 a0001c0001t0025g0210	2	310	0.0065	-22	c.336 others(41): Show c.336+11444_336+11465delATATATATATATATTTTTTTTT	RAB11FIP4	ENSG00000131242.18	transcript	ENST00000621161.5	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr17	TogoVar

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