Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
SGCZ_chr8_14079845_15243431	14325747	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01257.hp1 HG02004.hp1 others(13): Show HG01109.hp2 HG01257.hp1 HG02004.hp1 HG02109.hp2 HG02132.hp1 HG02280.hp1 HG02451.hp1 HG02809.hp1 HG02809.hp2 HG02922.hp2 HG03139.hp2 HG03942.hp2 HG04204.hp2 NA18959.hp2 NA19043.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0026 others(13): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0026 a0001c0001t0027 a0001c0001t0031 a0001c0001t0038 a0001c0001t0041 a0001c0001t0048 a0001c0001t0049 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0057 a0001c0001t0058 a0001c0001t0072 a0001c0001t0077	a0001c0001t0001g0076 a0001c0001t0006g0083 a0001c0001t0026g0035 others(13): Show a0001c0001t0001g0076 a0001c0001t0006g0083 a0001c0001t0026g0035 a0001c0001t0027g0010 a0001c0001t0031g0013 a0001c0001t0038g0023 a0001c0001t0041g0009 a0001c0001t0048g0051 a0001c0001t0049g0046 a0001c0001t0053g0056 a0001c0001t0054g0058 a0001c0001t0055g0100 a0001c0001t0057g0087 a0001c0001t0058g0097 a0001c0001t0072g0066 a0001c0001t0077g0065	16	102	0.1569	-22	c.235 others(39): Show c.235-1565_235-1544delATATATATATATATATATATAT	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	2/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	14479740	TTTTTTTT others(15): Show TTTTTTTTTTTTTTTTTTTTTTA	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01074.hp1 HG01081.hp1 others(8): Show HG00642.hp1 HG01074.hp1 HG01081.hp1 HG01257.hp2 HG01258.hp2 HG01978.hp1 HG01978.hp2 HG02004.hp2 HG02135.hp2 HG03704.hp1 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0026 a0001c0001t0032 others(7): Show a0001c0001t0003 a0001c0001t0026 a0001c0001t0032 a0001c0001t0035 a0001c0001t0044 a0001c0001t0047 a0001c0001t0051 a0001c0001t0056 a0001c0001t0068 a0001c0001t0076	a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0026g0035 others(8): Show a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0026g0035 a0001c0001t0032g0018 a0001c0001t0035g0014 a0001c0001t0044g0033 a0001c0001t0047g0043 a0001c0001t0051g0074 a0001c0001t0056g0062 a0001c0001t0068g0064 a0001c0001t0076g0073	11	102	0.1078	-22	c.234 others(41): Show c.234+74970_234+74991delTAAAAAAAAAAAAAAAAAAAAA	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	2/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	14831794	ACACATAC others(15): Show ACACATACATGTATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01257.hp1 HG02630.hp2 others(2): Show HG00642.hp2 HG01257.hp1 HG02630.hp2 HG02886.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0033 a0001c0001t0050 others(2): Show a0001c0001t0011 a0001c0001t0033 a0001c0001t0050 a0001c0001t0053 a0001c0001t0077	a0001c0001t0011g0042 a0001c0001t0033g0003 a0001c0001t0050g0045 others(2): Show a0001c0001t0011g0042 a0001c0001t0033g0003 a0001c0001t0050g0045 a0001c0001t0053g0056 a0001c0001t0077g0065	5	102	0.0490	-22	c.40- others(41): Show c.40-276890_40-276869delCACACATATATACATGTATGTG	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	1/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	14862535	GATATATA others(15): Show GATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0083 a0001c0001t0083	a0001c0001t0083g0057 a0001c0001t0083g0057	1	102	0.0098	-22	c.40- others(41): Show c.40-307631_40-307610delATATATATATATATATATATAT	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	1/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	14885985	TTATATAT others(15): Show TTATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03486.hp2 HG02809.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0045 a0001c0001t0027 a0001c0001t0045	a0001c0001t0027g0010 a0001c0001t0045g0008 a0001c0001t0027g0010 a0001c0001t0045g0008	2	102	0.0196	-22	c.40- others(41): Show c.40-331081_40-331060delTATATATATATATATATATATA	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	1/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	15097815	CGTGTGTG others(15): Show CGTGTGTGTATATATATATACGT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00642.hp1 HG01074.hp1 others(26): Show HG00438.hp1 HG00642.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01192.hp1 HG01243.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02135.hp2 HG02630.hp1 HG02886.hp2 HG03139.hp2 HG03540.hp1 HG03942.hp1 HG03942.hp2 HG04204.hp1 NA18612.hp2 NA18906.hp1 NA18951.hp2 NA19000.hp1 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 a0001c0001t0019 a0001c0001t0025 a0001c0001t0032 a0001c0001t0035 a0001c0001t0037 a0001c0001t0046 a0001c0001t0047 a0001c0001t0050 a0001c0001t0051 a0001c0001t0054 a0001c0001t0061 a0001c0001t0067 a0001c0001t0068 a0001c0001t0071 a0001c0001t0072 a0001c0001t0077 a0001c0001t0084 a0001c0001t0088 a0001c0001t0090	a0001c0001t0001g0076 a0001c0001t0001g0089 a0001c0001t0002g0079 others(26): Show a0001c0001t0001g0076 a0001c0001t0001g0089 a0001c0001t0002g0079 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0005g0072 a0001c0001t0006g0092 a0001c0001t0010g0002 a0001c0001t0012g0004 a0001c0001t0017g0011 a0001c0001t0019g0028 a0001c0001t0025g0022 a0001c0001t0032g0018 a0001c0001t0035g0014 a0001c0001t0037g0032 a0001c0001t0046g0019 a0001c0001t0047g0043 a0001c0001t0050g0045 a0001c0001t0051g0074 a0001c0001t0054g0058 a0001c0001t0061g0049 a0001c0001t0067g0068 a0001c0001t0068g0064 a0001c0001t0071g0067 a0001c0001t0072g0066 a0001c0001t0077g0065 a0001c0001t0084g0101 a0001c0001t0088g0054 a0001c0001t0090g0084	29	102	0.2843	-22	c.39+ others(41): Show c.39+139748_39+139769delACGTATATATATATACACACAC	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	1/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	15097894	ATATATAT others(15): Show ATATATATATATATATACGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 HG01074.hp2 others(12): Show HG00738.hp1 HG00738.hp2 HG01074.hp2 HG01109.hp1 HG01109.hp2 HG01258.hp1 HG01346.hp1 HG01993.hp1 HG02280.hp2 HG02451.hp2 HG02717.hp1 HG02809.hp1 NA18906.hp2 NA19056.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0024 a0001c0001t0030 others(11): Show a0001c0001t0002 a0001c0001t0024 a0001c0001t0030 a0001c0001t0031 a0001c0001t0034 a0001c0001t0036 a0001c0001t0039 a0001c0001t0040 a0001c0001t0049 a0001c0001t0052 a0001c0001t0059 a0001c0001t0066 a0001c0001t0082 a0001c0001t0086	a0001c0001t0002g0086 a0001c0001t0002g0095 a0001c0001t0024g0031 others(12): Show a0001c0001t0002g0086 a0001c0001t0002g0095 a0001c0001t0024g0031 a0001c0001t0030g0034 a0001c0001t0031g0013 a0001c0001t0034g0030 a0001c0001t0036g0012 a0001c0001t0039g0036 a0001c0001t0040g0038 a0001c0001t0049g0046 a0001c0001t0052g0077 a0001c0001t0059g0055 a0001c0001t0066g0099 a0001c0001t0082g0063 a0001c0001t0086g0078	15	102	0.1471	-22	c.39+ others(41): Show c.39+139669_39+139690delCACACGTATATATATATATATA	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	1/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	15186262	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01074.hp1 HG01081.hp2 others(20): Show HG00642.hp1 HG01074.hp1 HG01081.hp2 HG01109.hp2 HG01243.hp2 HG01346.hp2 HG02004.hp1 HG02004.hp2 HG02109.hp1 HG02132.hp2 HG02135.hp2 HG02717.hp1 HG02886.hp1 HG02922.hp1 HG03195.hp2 HG03209.hp1 HG03704.hp1 HG03942.hp2 NA18612.hp2 NA19000.hp1 NA19240.hp2 NA20129.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0013 a0001c0001t0014 a0001c0001t0018 a0001c0001t0020 a0001c0001t0022 a0001c0001t0031 a0001c0001t0035 a0001c0001t0039 a0001c0001t0051 a0001c0001t0052 a0001c0001t0056 a0001c0001t0064 a0001c0001t0067 a0001c0001t0068 a0001c0001t0070 a0001c0001t0071 a0001c0001t0072 a0001c0001t0076 a0002c0002t0004 a0002c0002t0007	a0001c0001t0001g0076 a0001c0001t0002g0079 a0001c0001t0010g0002 others(20): Show a0001c0001t0001g0076 a0001c0001t0002g0079 a0001c0001t0010g0002 a0001c0001t0013g0026 a0001c0001t0014g0024 a0001c0001t0018g0037 a0001c0001t0020g0025 a0001c0001t0022g0007 a0001c0001t0031g0013 a0001c0001t0035g0014 a0001c0001t0039g0036 a0001c0001t0051g0074 a0001c0001t0052g0077 a0001c0001t0056g0062 a0001c0001t0064g0069 a0001c0001t0067g0068 a0001c0001t0068g0064 a0001c0001t0070g0081 a0001c0001t0071g0067 a0001c0001t0072g0066 a0001c0001t0076g0073 a0002c0002t0004g0027 a0002c0002t0007g0070	23	102	0.2255	-22	c.39+ others(39): Show c.39+51301_39+51322delTTTTTTTTTTTTTTTTTTTTTT	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	1/7		chr8	TogoVar
SGCZ_chr8_14079845_15243431	15186281	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAAAAGTT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 HG00738.hp1 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0082 a0001c0001t0030 a0001c0001t0082	a0001c0001t0030g0034 a0001c0001t0082g0063 a0001c0001t0030g0034 a0001c0001t0082g0063	2	102	0.0196	-22	c.39+ others(39): Show c.39+51282_39+51303delAACTTTTTTTTTTTTTTTTTTT	SGCZ	ENSG00000185053.14	transcript	ENST00000382080.6	protein_coding	1/7		chr8	TogoVar
SGIP1_chr1_66529153_66756139	66589163	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00733.hp1 HG01167.hp2 others(14): Show HG00642.hp1 HG00733.hp1 HG01167.hp2 HG01261.hp2 HG02257.hp2 HG02602.hp2 HG02622.hp2 HG02683.hp2 HG02809.hp2 HG02922.hp1 HG03139.hp1 HG03490.hp1 HG03492.hp2 HG03688.hp2 HG04228.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0002c0003 others(1): Show a0001c0001 a0002c0002 a0002c0003 a0005c0010	a0001c0001t0011 a0001c0001t0026 a0002c0002t0001 others(5): Show a0001c0001t0011 a0001c0001t0026 a0002c0002t0001 a0002c0002t0003 a0002c0002t0004 a0002c0002t0013 a0002c0003t0004 a0005c0010t0013	a0001c0001t0011g0255 a0001c0001t0026g0207 a0002c0002t0001g0116 others(14): Show a0001c0001t0011g0255 a0001c0001t0026g0207 a0002c0002t0001g0116 a0002c0002t0003g0239 a0002c0002t0003g0244 a0002c0002t0003g0245 a0002c0002t0003g0246 a0002c0002t0003g0248 a0002c0002t0004g0108 a0002c0002t0004g0120 a0002c0002t0004g0121 a0002c0002t0004g0199 a0002c0002t0013g0241 a0002c0002t0013g0247 a0002c0003t0004g0155 a0005c0010t0013g0242 a0005c0010t0013g0243	17	302	0.0563	-22	c.11- others(39): Show c.11-36651_11-36630delATATATATATATATATATATAT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66631667	TTCTCTCT others(15): Show TTCTCTCTCTCTCTTTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0004 a0001c0007t0004	a0001c0007t0004g0114 a0001c0007t0004g0114	1	302	0.0033	-22	c.75- others(37): Show c.75-1389_75-1368delTTCTCTCTCTCTCTCTCTCTCT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66631681	TTCTCTCT others(15): Show TTCTCTCTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00438.hp2 others(41): Show HG00099.hp1 HG00140.hp1 HG00438.hp2 HG00609.hp1 HG01074.hp2 HG01168.hp2 HG01192.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp2 HG02055.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02451.hp2 HG02615.hp1 HG02647.hp2 HG02896.hp2 HG03017.hp2 HG03098.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03654.hp2 HG03688.hp1 HG03942.hp2 NA18522.hp1 NA18906.hp1 NA18948.hp2 NA18950.hp1 NA18952.hp2 NA18957.hp1 NA18969.hp1 NA18970.hp1 NA18972.hp2 NA18984.hp1 NA18991.hp1 NA19011.hp1 NA19058.hp2 NA19064.hp1 NA19074.hp2 NA19087.hp1 NA20129.hp1 NA20905.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0004 a0001c0013 others(1): Show a0001c0001 a0001c0004 a0001c0013 a0007c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0011 a0001c0001t0012 a0001c0001t0023 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0032 a0001c0001t0052 a0001c0001t0056 a0001c0001t0059 a0001c0004t0001 a0001c0004t0025 a0001c0013t0004 a0007c0015t0001	a0001c0001t0001g0070 a0001c0001t0001g0085 a0001c0001t0001g0089 others(41): Show a0001c0001t0001g0070 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0138 a0001c0001t0001g0163 a0001c0001t0001g0172 a0001c0001t0001g0203 a0001c0001t0001g0263 a0001c0001t0001g0271 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0002g0096 a0001c0001t0002g0206 a0001c0001t0002g0264 a0001c0001t0002g0298 a0001c0001t0004g0002 a0001c0001t0004g0205 a0001c0001t0011g0255 a0001c0001t0012g0101 a0001c0001t0012g0102 a0001c0001t0012g0104 a0001c0001t0012g0105 a0001c0001t0012g0106 a0001c0001t0023g0113 a0001c0001t0026g0207 a0001c0001t0027g0090 a0001c0001t0027g0091 a0001c0001t0028g0258 a0001c0001t0028g0302 a0001c0001t0032g0098 a0001c0001t0052g0201 a0001c0001t0056g0267 a0001c0001t0059g0103 a0001c0004t0001g0009 a0001c0004t0001g0014 a0001c0004t0001g0088 a0001c0004t0001g0092 a0001c0004t0001g0093 a0001c0004t0001g0261 a0001c0004t0025g0086 a0001c0013t0004g0099 a0007c0015t0001g0110	44	302	0.1457	-22	c.75- others(37): Show c.75-1363_75-1342delCTCTCTCTCTCTCTCTCTCTCT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66632712	GAGCCAGC others(15): Show GAGCCAGCTAGAGTGGGACAGTT	G G	intron_variant intron_variant	MODIFIER	NA18950.hp2 NA19006.hp2 NA18950.hp2 NA19006.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0045 a0001c0001t0002 a0001c0001t0045	a0001c0001t0002g0005 a0001c0001t0045g0006 a0001c0001t0002g0005 a0001c0001t0045g0006	2	302	0.0066	-22	c.75- others(35): Show c.75-340_75-319delCAGTTAGCCAGCTAGAGTGGGA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66637440	CGTGTGTG others(15): Show CGTGTGTGTGTGTGTTTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00558.hp2 others(64): Show HG00408.hp1 HG00423.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00642.hp2 HG00735.hp1 HG00741.hp2 HG01069.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01943.hp2 HG01978.hp2 HG02015.hp2 HG02027.hp1 HG02056.hp2 HG02083.hp1 HG02135.hp2 HG02148.hp1 HG02155.hp2 HG02165.hp2 HG02523.hp1 HG02523.hp2 HG02735.hp1 HG02895.hp1 HG03017.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03942.hp1 HG04199.hp1 HG04228.hp1 NA18945.hp1 NA18948.hp1 NA18949.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp2 NA18956.hp2 NA18959.hp1 NA18961.hp1 NA18969.hp2 NA18970.hp2 NA18972.hp1 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp2 NA19056.hp1 NA19058.hp1 NA19065.hp2 NA19074.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp2 NA19087.hp2 NA19091.hp1 NA20752.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0008 a0001c0001 a0001c0004 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0016 a0001c0001t0017 a0001c0001t0021 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0045 a0001c0001t0046 a0001c0001t0047 a0001c0004t0001 a0001c0008t0002	a0001c0001t0001g0032 a0001c0001t0001g0080 a0001c0001t0001g0132 others(64): Show a0001c0001t0001g0032 a0001c0001t0001g0080 a0001c0001t0001g0132 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0049 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0067 a0001c0001t0002g0075 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0128 a0001c0001t0002g0134 a0001c0001t0002g0143 a0001c0001t0002g0278 a0001c0001t0002g0291 a0001c0001t0003g0025 a0001c0001t0003g0037 a0001c0001t0003g0068 a0001c0001t0003g0074 a0001c0001t0003g0197 a0001c0001t0004g0019 a0001c0001t0007g0051 a0001c0001t0007g0056 a0001c0001t0010g0023 a0001c0001t0010g0024 a0001c0001t0010g0028 a0001c0001t0010g0047 a0001c0001t0010g0050 a0001c0001t0016g0038 a0001c0001t0017g0033 a0001c0001t0017g0034 a0001c0001t0017g0052 a0001c0001t0021g0048 a0001c0001t0039g0073 a0001c0001t0040g0041 a0001c0001t0041g0297 a0001c0001t0042g0007 a0001c0001t0043g0194 a0001c0001t0045g0006 a0001c0001t0046g0072 a0001c0001t0047g0039 a0001c0004t0001g0058 a0001c0004t0001g0062 a0001c0008t0002g0195 a0001c0008t0002g0196	67	302	0.2219	-22	c.171 others(39): Show c.171+1440_171+1461delTTGTGTGTGTGTGTGTGTGTGT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	4/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66642717	TTCTATAT others(15): Show TTCTATATCCTTAAATAGAAGAC	T T	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG03669.hp1 HG04115.hp2 others(2): Show HG02015.hp1 HG03669.hp1 HG04115.hp2 HG04199.hp2 HG04204.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0033 a0002c0003t0034 a0002c0003t0005 a0002c0003t0033 a0002c0003t0034	a0002c0003t0005g0129 a0002c0003t0005g0130 a0002c0003t0005g0136 others(2): Show a0002c0003t0005g0129 a0002c0003t0005g0130 a0002c0003t0005g0136 a0002c0003t0033g0262 a0002c0003t0034g0156	5	302	0.0166	-22	c.229 others(35): Show c.229-88_229-67delTATCCTTAAATAGAAGACTCTA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	5/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66659940	AAAAGAAA others(15): Show AAAAGAAAGAAAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0001 a0001c0001t0024g0001	1	302	0.0033	-22	c.460 others(37): Show c.460-561_460-540delAAGAAAGAAAGAAAGAAAGAAA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGIP1_chr1_66529153_66756139	66660136	GAAAGAAG others(15): Show GAAAGAAGAGAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01070.hp2 HG01071.hp2 others(8): Show HG00597.hp2 HG01070.hp2 HG01071.hp2 HG01496.hp2 HG02717.hp2 NA18961.hp2 NA18974.hp1 NA18978.hp1 NA19002.hp1 NA19085.hp1 NA19088.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0009 a0002c0002t0026 a0002c0002t0003 a0002c0002t0009 a0002c0002t0026	a0002c0002t0003g0015 a0002c0002t0003g0166 a0002c0002t0003g0260 others(8): Show a0002c0002t0003g0015 a0002c0002t0003g0166 a0002c0002t0003g0260 a0002c0002t0003g0273 a0002c0002t0003g0274 a0002c0002t0003g0293 a0002c0002t0003g0300 a0002c0002t0009g0012 a0002c0002t0009g0013 a0002c0002t0009g0135 a0002c0002t0026g0249	11	302	0.0364	-22	c.460 others(37): Show c.460-376_460-355delAAAGAAGAGAGAAAGAAAGAAA	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	7/24		chr1	TogoVar
SGIP1_chr1_66529153_66756139	66736405	ATATGTGA others(15): Show ATATGTGAATATAATATATTGCG	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00558.hp2 HG00597.hp1 others(78): Show HG00423.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00642.hp2 HG00741.hp2 HG01069.hp2 HG01081.hp2 HG01192.hp1 HG01358.hp2 HG01361.hp1 HG01496.hp2 HG01943.hp2 HG01978.hp2 HG02015.hp2 HG02027.hp1 HG02055.hp2 HG02056.hp2 HG02135.hp2 HG02148.hp1 HG02155.hp2 HG02257.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02723.hp1 HG02735.hp1 HG03017.hp1 HG03098.hp1 HG03195.hp1 HG03225.hp1 HG03654.hp1 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03942.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18906.hp2 NA18944.hp2 NA18945.hp1 NA18948.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp2 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18969.hp1 NA18970.hp2 NA18972.hp1 NA18974.hp1 NA18974.hp2 NA18978.hp1 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA19002.hp1 NA19002.hp2 NA19006.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp2 NA19056.hp1 NA19058.hp1 NA19064.hp1 NA19065.hp1 NA19074.hp1 NA19079.hp1 NA19083.hp1 NA19087.hp2 NA19088.hp2 NA19091.hp2 NA20129.hp1 NA20752.hp1 NA20905.hp2	a0001 a0002 a0008 others(1): Show a0001 a0002 a0008 a0009	a0001c0001 a0001c0008 a0002c0002 others(2): Show a0001c0001 a0001c0008 a0002c0002 a0008c0011 a0009c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0016 a0001c0001t0021 a0001c0001t0026 a0001c0001t0028 a0001c0001t0039 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0045 a0001c0001t0046 a0001c0001t0047 a0001c0008t0002 a0002c0002t0003 a0002c0002t0009 a0002c0002t0011 a0008c0011t0035 a0009c0017t0002	a0001c0001t0001g0032 a0001c0001t0001g0085 a0001c0001t0001g0109 others(78): Show a0001c0001t0001g0032 a0001c0001t0001g0085 a0001c0001t0001g0109 a0001c0001t0001g0235 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0049 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0057 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0067 a0001c0001t0002g0075 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0096 a0001c0001t0002g0128 a0001c0001t0002g0134 a0001c0001t0002g0143 a0001c0001t0002g0191 a0001c0001t0002g0264 a0001c0001t0002g0278 a0001c0001t0002g0291 a0001c0001t0003g0074 a0001c0001t0007g0051 a0001c0001t0007g0056 a0001c0001t0007g0182 a0001c0001t0008g0159 a0001c0001t0008g0160 a0001c0001t0008g0161 a0001c0001t0008g0162 a0001c0001t0010g0023 a0001c0001t0010g0024 a0001c0001t0010g0028 a0001c0001t0010g0047 a0001c0001t0010g0050 a0001c0001t0011g0165 a0001c0001t0011g0255 a0001c0001t0016g0038 a0001c0001t0021g0048 a0001c0001t0026g0207 a0001c0001t0028g0302 a0001c0001t0039g0073 a0001c0001t0041g0297 a0001c0001t0042g0007 a0001c0001t0043g0194 a0001c0001t0045g0006 a0001c0001t0046g0072 a0001c0001t0047g0039 a0001c0008t0002g0195 a0001c0008t0002g0196 a0002c0002t0003g0015 a0002c0002t0003g0016 a0002c0002t0003g0166 a0002c0002t0003g0244 a0002c0002t0009g0011 a0002c0002t0009g0012 a0002c0002t0009g0013 a0002c0002t0009g0017 a0002c0002t0009g0135 a0002c0002t0009g0259 a0002c0002t0011g0250 a0002c0002t0011g0253 a0002c0002t0011g0256 a0008c0011t0035g0149 a0009c0017t0002g0010	81	302	0.2682	-22	c.203 others(41): Show c.2031+2529_2031+2550delGTGAATATAATATATTGCGTAT	SGIP1	ENSG00000118473.23	transcript	ENST00000371037.9	protein_coding	21/24	INFO_REALIGN_3_PRIME	chr1	TogoVar
SGK1_chr6_134164256_134323112	134204948	CCTCCTTT others(15): Show CCTCCTTTTCTTTCTTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03209.hp1 HG02818.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0207 a0001c0001t0001g0061 a0001c0001t0001g0207	2	250	0.0080	-22	c.361 others(39): Show c.361+2386_361+2407delAGAAAGAAAGAAAGAAAAGGAG	SGK1	ENSG00000118515.12	transcript	ENST00000367858.10	protein_coding	3/13		chr6	TogoVar
SGK3_chr8_66707781_66867022	66717215	AAAACAAA others(15): Show AAAACAAAAAAAACAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02647.hp1 HG02809.hp1 others(5): Show HG02622.hp2 HG02647.hp1 HG02809.hp1 HG02895.hp1 HG03195.hp2 HG03471.hp2 NA18906.hp1 NA19043.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0004 a0001c0002t0013 a0001c0002t0002 a0001c0002t0004 a0001c0002t0013	a0001c0002t0002g0024 a0001c0002t0002g0056 a0001c0002t0002g0057 others(5): Show a0001c0002t0002g0024 a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0058 a0001c0002t0002g0059 a0001c0002t0004g0016 a0001c0002t0004g0017 a0001c0002t0013g0025	8	142	0.0563	-22	c.-12 others(41): Show c.-122+4386_-122+4407delCAAAAAAAACAAAAAAAACAAA	SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	1/16	INFO_REALIGN_3_PRIME	chr8	TogoVar
SGK3_chr8_66707781_66867022	66744483	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0126	1	142	0.0070	-22	c.-12 others(43): Show c.-122+31666_-122+31687delATATATATATATATATATATAT	SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	1/16	INFO_REALIGN_3_PRIME	chr8	TogoVar
SGK3_chr8_66707781_66867022	66839498	GATATATA others(15): Show GATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0086 a0001c0001t0001g0086	1	142	0.0070	-22	c.742 others(37): Show c.742-466_742-445delATATATATATATATATATATAT	SGK3	ENSG00000104205.16	transcript	ENST00000521198.7	protein_coding	10/16	INFO_REALIGN_3_PRIME	chr8	TogoVar
SGMS1_chr10_50300600_50628956	50400396	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00741.hp1 HG00099.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0219 a0001c0001t0005g0223 a0001c0001t0005g0219 a0001c0001t0005g0223	2	312	0.0064	-22	c.-23 others(43): Show c.-232+33058_-232+33079delATATATATATATATATATATAT	SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	6/10		chr10	TogoVar
SGMS1_chr10_50300600_50628956	50550399	ATGAAGCT others(15): Show ATGAAGCTGCGGACTAGCTATCC	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02809.hp2 HG03471.hp1 others(2): Show HG02451.hp1 HG02809.hp2 HG03471.hp1 HG03516.hp1 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0006 a0001c0002t0001 a0001c0002t0006	a0001c0002t0001g0245 a0001c0002t0006g0002 a0001c0002t0006g0003 others(2): Show a0001c0002t0001g0245 a0001c0002t0006g0002 a0001c0002t0006g0003 a0001c0002t0006g0004 a0001c0002t0006g0005	5	312	0.0160	-22	c.-58 others(43): Show c.-588-30500_-588-30479delGGATAGCTAGTCCGCAGCTTCA	SGMS1	ENSG00000198964.14	transcript	ENST00000361781.7	protein_coding	2/10		chr10	TogoVar
SGPP1_chr14_63679216_63733065	63719002	ATATATAT others(15): Show ATATATATATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0035 a0001c0002t0008g0035	1	288	0.0035	-22	c.684 others(39): Show c.684+8237_684+8258delAAAAAAAAAATATATATATATA	SGPP1	ENSG00000126821.8	transcript	ENST00000247225.7	protein_coding	1/2		chr14	TogoVar
SGPP2_chr2_222419543_222567621	222467950	GAAAAAAA others(15): Show GAAAAAAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0025 a0001c0002t0025	a0001c0002t0025g0041 a0001c0002t0025g0041	1	272	0.0037	-22	c.220 others(39): Show c.220-6601_220-6580delAAAAAAAAAAAAAAAAAAAAAA	SGPP2	ENSG00000163082.10	transcript	ENST00000321276.8	protein_coding	1/4	INFO_REALIGN_3_PRIME	chr2	TogoVar
SGTA_chr19_2749715_2788273	2770091	CTCGGACA others(15): Show CTCGGACACCCTCCTGGTTCCCT	C C	intron_variant intron_variant	MODIFIER	NA18948.hp2 NA18948.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0122 a0001c0002t0002g0122	1	396	0.0025	-22	c.-23 others(39): Show c.-23-1022_-23-1001delAGGGAACCAGGAGGGTGTCCGA	SGTA	ENSG00000104969.11	transcript	ENST00000221566.7	protein_coding	1/11		chr19	TogoVar
SH2B2_chr7_102281868_102326711	102301536	TCGTGTGT others(15): Show TCGTGTGTGTGTGTGTGTGTGTC	T T	intron_variant intron_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0209 a0001c0001t0001g0209	1	406	0.0025	-22	c.729 others(37): Show c.729+279_729+300delCCGTGTGTGTGTGTGTGTGTGT	SH2B2	ENSG00000160999.11	transcript	ENST00000444095.3	protein_coding	2/8	INFO_REALIGN_3_PRIME	chr7	TogoVar
SH2D1B_chr1_162390268_162417136	162403503	AAAAAAAA others(15): Show AAAAAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00741.hp1 HG01361.hp2 others(17): Show HG00609.hp2 HG00741.hp1 HG01361.hp2 HG02109.hp1 HG02257.hp1 HG02559.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02886.hp1 HG02922.hp1 HG03041.hp1 HG03130.hp2 HG03704.hp1 HG06807.hp1 NA18906.hp1 NA18906.hp2 NA18967.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0002t0017 a0001c0001t0001 a0001c0002t0002 a0001c0002t0017	a0001c0001t0001g0147 a0001c0002t0002g0005 a0001c0002t0002g0031 others(9): Show a0001c0001t0001g0147 a0001c0002t0002g0005 a0001c0002t0002g0031 a0001c0002t0002g0035 a0001c0002t0002g0036 a0001c0002t0002g0117 a0001c0002t0002g0118 a0001c0002t0002g0144 a0001c0002t0002g0146 a0001c0002t0002g0148 a0001c0002t0002g0179 a0001c0002t0017g0149	20	424	0.0472	-22	c.135 others(37): Show c.135-723_135-702delATATATATATATATTTTTTTTT	SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding	1/3		chr1	TogoVar
SH2D1B_chr1_162390268_162417136	162403505	AAAAAAAA others(15): Show AAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00323.hp2 others(82): Show HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01515.hp1 HG01928.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01993.hp1 HG02004.hp1 HG02132.hp1 HG02165.hp1 HG02258.hp1 HG02258.hp2 HG02293.hp1 HG02683.hp2 HG02717.hp1 HG02896.hp2 HG02976.hp2 HG03017.hp1 HG03453.hp2 HG03490.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03710.hp2 HG03834.hp2 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18939.hp1 NA18939.hp2 NA18943.hp1 NA18949.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18954.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp2 NA18960.hp2 NA18961.hp2 NA18964.hp1 NA18969.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp1 NA18987.hp1 NA18988.hp2 NA18992.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19003.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19054.hp1 NA19056.hp1 NA19057.hp2 NA19064.hp2 NA19068.hp2 NA19070.hp1 NA19081.hp2 NA19087.hp1 NA19088.hp1 NA19091.hp1	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0001c0002 a0005c0006 others(1): Show a0001c0001 a0001c0002 a0005c0006 a0006c0008	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0002t0014 a0001c0002t0015 a0005c0006t0004 a0006c0008t0002	a0001c0001t0001g0123 a0001c0002t0001g0115 a0001c0002t0002g0001 others(30): Show a0001c0001t0001g0123 a0001c0002t0001g0115 a0001c0002t0002g0001 a0001c0002t0002g0015 a0001c0002t0002g0016 a0001c0002t0002g0030 a0001c0002t0002g0032 a0001c0002t0002g0034 a0001c0002t0002g0037 a0001c0002t0002g0106 a0001c0002t0002g0108 a0001c0002t0002g0110 a0001c0002t0002g0111 a0001c0002t0002g0112 a0001c0002t0002g0113 a0001c0002t0002g0116 a0001c0002t0002g0122 a0001c0002t0002g0124 a0001c0002t0002g0125 a0001c0002t0002g0128 a0001c0002t0002g0132 a0001c0002t0002g0133 a0001c0002t0002g0134 a0001c0002t0002g0135 a0001c0002t0002g0136 a0001c0002t0002g0137 a0001c0002t0002g0143 a0001c0002t0002g0178 a0001c0002t0002g0182 a0001c0002t0014g0101 a0001c0002t0015g0126 a0005c0006t0004g0127 a0006c0008t0002g0277	85	424	0.2005	-22	c.135 others(37): Show c.135-725_135-704delATATATATATATATATTTTTTT	SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding	1/3		chr1	TogoVar
SH2D1B_chr1_162390268_162417136	162403507	AAAAAATA others(15): Show AAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18947.hp1 NA18947.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0114 a0001c0002t0002g0114	1	424	0.0024	-22	c.135 others(37): Show c.135-727_135-706delATATATATATATATATATTTTT	SH2D1B	ENSG00000198574.6	transcript	ENST00000367929.3	protein_coding	1/3		chr1	TogoVar
SH2D4B_chr10_80532902_80651560	80572966	ATATATAT others(15): Show ATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	322	0.0031	-22	c.495 others(39): Show c.495+1390_495+1411delATATATATATATATATATATTT	SH2D4B	ENSG00000178217.15	transcript	ENST00000646907.2	protein_coding	3/7	INFO_REALIGN_3_PRIME	chr10	TogoVar
SH2D4B_chr10_80532902_80651560	80572970	ATATATAT others(15): Show ATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA19063.hp2 HG00558.hp1 NA19063.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0065 a0003c0003t0001g0098 a0001c0001t0001g0065 a0003c0003t0001g0098	2	322	0.0062	-22	c.495 others(39): Show c.495+1394_495+1415delATATATATATATATATTTTTTT	SH2D4B	ENSG00000178217.15	transcript	ENST00000646907.2	protein_coding	3/7	INFO_REALIGN_3_PRIME	chr10	TogoVar
SH2D4B_chr10_80532902_80651560	80572972	ATATATAT others(15): Show ATATATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18969.hp1 NA19004.hp2 others(1): Show NA18943.hp1 NA18969.hp1 NA19004.hp2 NA19074.hp1	a0003 a0004 a0003 a0004	a0003c0003 a0004c0004 a0003c0003 a0004c0004	a0003c0003t0001 a0003c0003t0002 a0004c0004t0001 others(1): Show a0003c0003t0001 a0003c0003t0002 a0004c0004t0001 a0004c0004t0013	a0003c0003t0001g0061 a0003c0003t0002g0058 a0004c0004t0001g0075 others(1): Show a0003c0003t0001g0061 a0003c0003t0002g0058 a0004c0004t0001g0075 a0004c0004t0013g0056	4	322	0.0124	-22	c.495 others(39): Show c.495+1396_495+1417delATATATATATATATTTTTTTTT	SH2D4B	ENSG00000178217.15	transcript	ENST00000646907.2	protein_coding	3/7	INFO_REALIGN_3_PRIME	chr10	TogoVar
SH3BGR_chr21_39446970_39520504	39510909	CTATATAT others(15): Show CTATATATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02080.hp2 NA19030.hp2 HG02080.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0109 a0002c0002t0001g0120 a0001c0001t0001g0109 a0002c0002t0001g0120	2	302	0.0066	-22	c.436 others(37): Show c.436-754_436-733delTATATATATATATATATATATA	SH3BGR	ENSG00000185437.16	transcript	ENST00000333634.10	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr21	TogoVar
SH3BP5_chr3_15249353_15337586	15265512	TCACACAC others(15): Show TCACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00642.hp2 HG00738.hp1 others(24): Show HG00621.hp2 HG00642.hp2 HG00738.hp1 HG01261.hp2 HG01496.hp2 HG01516.hp2 HG02071.hp1 HG02738.hp1 HG02738.hp2 HG03471.hp2 HG03491.hp1 HG03492.hp2 HG03654.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG04184.hp1 NA18747.hp2 NA18943.hp2 NA18948.hp2 NA18952.hp1 NA18993.hp2 NA18995.hp1 NA19001.hp1 NA19002.hp1 NA19065.hp1 NA19074.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0174 a0001c0001t0001g0176 others(23): Show a0001c0001t0001g0001 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0190 a0001c0001t0001g0232 a0001c0001t0001g0242 a0001c0001t0001g0249 a0001c0001t0001g0288 a0001c0001t0001g0290 a0001c0001t0001g0297 a0001c0001t0001g0316 a0001c0001t0001g0319 a0001c0001t0003g0105 a0001c0002t0001g0201 a0001c0002t0001g0203 a0001c0002t0001g0208 a0001c0002t0001g0228 a0001c0002t0001g0233 a0001c0002t0001g0257 a0001c0002t0001g0263 a0001c0002t0001g0364 a0001c0002t0002g0054 a0001c0002t0002g0089 a0001c0002t0003g0095 a0001c0002t0003g0123 a0002c0003t0001g0167	27	376	0.0718	-22	c.496 others(39): Show c.496-3245_496-3224delTGTGTGTGTGTGTGTGTGTGTG	SH3BP5	ENSG00000131370.16	transcript	ENST00000383791.8	protein_coding	4/8		chr3	TogoVar
SH3D19_chr4_151115281_151330605	151216877	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0272 a0001c0001t0001g0272	1	282	0.0036	-22	c.152 others(39): Show c.152+9148_152+9169delCACACACACACACACACACACA	SH3D19	ENSG00000109686.20	transcript	ENST00000604030.7	protein_coding	2/19		chr4	TogoVar
SH3D19_chr4_151115281_151330605	151280401	ACTGCAGC others(15): Show ACTGCAGCTCACCTTGATTGCAG	A A	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA19068.hp1 NA18747.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0192 a0001c0001t0001g0218 a0001c0001t0001g0192 a0001c0001t0001g0218	2	282	0.0071	-22	c.112 others(41): Show c.112+44818_112+44839delCTGCAATCAAGGTGAGCTGCAG	SH3D19	ENSG00000109686.20	transcript	ENST00000604030.7	protein_coding	1/19		chr4	TogoVar
SH3GL1_chr19_4355370_4405547	4361902	TCCCCTCT others(15): Show TCCCCTCTGCCCTGCCTGGGCCA	T T	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	358	0.0028	-22	c.911 others(37): Show c.911-128_911-107delTGGCCCAGGCAGGGCAGAGGGG	SH3GL1	ENSG00000141985.9	transcript	ENST00000269886.7	protein_coding	9/9		chr19	TogoVar
SH3GL2_chr9_17574066_17802124	17628411	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02109.hp2 HG02451.hp2 HG01884.hp1 HG02109.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161	3	260	0.0115	-22	c.45+ others(39): Show c.45+49145_45+49166delGTGTGTGTGTGTGTGTGTGTGT	SH3GL2	ENSG00000107295.10	transcript	ENST00000380607.5	protein_coding	1/8	INFO_REALIGN_3_PRIME	chr9	TogoVar
SH3KBP1_chrX_19528977_19892600	19634031	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	204	0.0049	-22	c.803 others(39): Show c.803-2095_803-2074delACACACACACACACACACACAC	SH3KBP1	ENSG00000147010.19	transcript	ENST00000397821.8	protein_coding	7/17		chrX	TogoVar
SH3KBP1_chrX_19528977_19892600	19638088	AAAACAAA others(15): Show AAAACAAAAAAAAACAAACAAAC	A A	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	204	0.0049	-22	c.803 others(39): Show c.803-6152_803-6131delGTTTGTTTGTTTTTTTTTGTTT	SH3KBP1	ENSG00000147010.19	transcript	ENST00000397821.8	protein_coding	7/17		chrX	TogoVar
SH3KBP1_chrX_19528977_19892600	19703696	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03490.hp1 HG03017.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0118 a0001c0001t0001g0097 a0001c0001t0001g0118	2	204	0.0098	-22	c.390 others(39): Show c.390+3163_390+3184delCACACACACACACACACACACA	SH3KBP1	ENSG00000147010.19	transcript	ENST00000397821.8	protein_coding	4/17		chrX	TogoVar
SH3KBP1_chrX_19528977_19892600	19760023	CCTCTCTC others(15): Show CCTCTCTCTCTCTCTCTCCCTCT	C C	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0023 a0001c0001t0008g0023	1	204	0.0049	-22	c.163 others(41): Show c.163-13604_163-13583delAGAGGGAGAGAGAGAGAGAGAG	SH3KBP1	ENSG00000147010.19	transcript	ENST00000397821.8	protein_coding	2/17		chrX	TogoVar
SH3PXD2A_chr10_103589027_103860576	103615483	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00408.hp1 HG00423.hp2 others(35): Show HG00280.hp2 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00642.hp1 HG01071.hp1 HG01192.hp1 HG01261.hp2 HG01928.hp1 HG01981.hp1 HG02083.hp2 HG02293.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG03017.hp1 HG03490.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG04204.hp1 HG06807.hp1 NA18906.hp1 NA18975.hp2 NA18979.hp1 NA19002.hp1 NA19010.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp2 NA19070.hp1 NA19080.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0003 a0001c0008 a0001c0003 a0001c0008	a0001c0003t0003 a0001c0003t0011 a0001c0003t0015 others(22): Show a0001c0003t0003 a0001c0003t0011 a0001c0003t0015 a0001c0003t0032 a0001c0003t0033 a0001c0003t0034 a0001c0003t0035 a0001c0003t0054 a0001c0003t0055 a0001c0003t0058 a0001c0003t0060 a0001c0003t0061 a0001c0003t0062 a0001c0003t0065 a0001c0003t0080 a0001c0003t0094 a0001c0003t0098 a0001c0003t0100 a0001c0003t0101 a0001c0003t0105 a0001c0008t0027 a0001c0008t0051 a0001c0008t0079 a0001c0008t0125 a0001c0008t0126	a0001c0003t0003g0212 a0001c0003t0011g0014 a0001c0003t0011g0028 others(35): Show a0001c0003t0003g0212 a0001c0003t0011g0014 a0001c0003t0011g0028 a0001c0003t0011g0035 a0001c0003t0011g0039 a0001c0003t0015g0136 a0001c0003t0015g0137 a0001c0003t0015g0183 a0001c0003t0015g0236 a0001c0003t0032g0002 a0001c0003t0032g0045 a0001c0003t0033g0067 a0001c0003t0033g0085 a0001c0003t0034g0034 a0001c0003t0034g0052 a0001c0003t0035g0059 a0001c0003t0035g0060 a0001c0003t0054g0065 a0001c0003t0055g0071 a0001c0003t0058g0066 a0001c0003t0060g0033 a0001c0003t0061g0061 a0001c0003t0062g0012 a0001c0003t0065g0025 a0001c0003t0080g0086 a0001c0003t0094g0182 a0001c0003t0098g0179 a0001c0003t0100g0186 a0001c0003t0101g0184 a0001c0003t0105g0211 a0001c0008t0027g0162 a0001c0008t0027g0175 a0001c0008t0027g0215 a0001c0008t0051g0246 a0001c0008t0051g0247 a0001c0008t0079g0046 a0001c0008t0125g0164 a0001c0008t0126g0090	38	250	0.1520	-22	c.920 others(39): Show c.920+1692_920+1713delACACACACACACACACACACAC	SH3PXD2A	ENSG00000107957.17	transcript	ENST00000369774.9	protein_coding	11/14		chr10	TogoVar
SH3PXD2A_chr10_103589027_103860576	103839557	GCAGCCCC others(15): Show GCAGCCCCTCCCCCAAGGCCACA	G G	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0118 a0001c0002t0118	a0001c0002t0118g0114 a0001c0002t0118g0114	1	250	0.0040	-22	c.72+ others(39): Show c.72+15616_72+15637delTGTGGCCTTGGGGGAGGGGCTG	SH3PXD2A	ENSG00000107957.17	transcript	ENST00000369774.9	protein_coding	1/14		chr10	TogoVar
SH3PXD2A_chr10_103589027_103860576	103839615	AAGGCCAC others(15): Show AAGGCCACGCAGCCCCTCCCCAG	A A	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0001 a0003c0007t0001	a0003c0007t0001g0147 a0003c0007t0001g0147	1	250	0.0040	-22	c.72+ others(39): Show c.72+15558_72+15579delCTGGGGAGGGGCTGCGTGGCCT	SH3PXD2A	ENSG00000107957.17	transcript	ENST00000369774.9	protein_coding	1/14		chr10	TogoVar
SH3PXD2B_chr5_172328499_172459525	172439248	AAAGAAAA others(15): Show AAAGAAAAAAAAAAAACAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02622.hp2 HG02647.hp1 others(3): Show HG01891.hp2 HG02622.hp2 HG02647.hp1 HG02717.hp2 HG02886.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0011 a0001c0005t0016 a0001c0001t0011 a0001c0005t0016	a0001c0001t0011g0266 a0001c0001t0011g0269 a0001c0001t0011g0270 others(3): Show a0001c0001t0011g0266 a0001c0001t0011g0269 a0001c0001t0011g0270 a0001c0001t0011g0271 a0001c0005t0016g0267 a0001c0005t0016g0268	6	280	0.0214	-22	c.75+ others(39): Show c.75+15008_75+15029delGTTTTTGTTTTTTTTTTTTCTT	SH3PXD2B	ENSG00000174705.13	transcript	ENST00000311601.6	protein_coding	1/12		chr5	TogoVar
SH3PXD2B_chr5_172328499_172459525	172439688	GCGCGCAC others(15): Show GCGCGCACACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02976.hp2 HG02723.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0080 a0001c0001t0019 a0001c0001t0080	a0001c0001t0019g0190 a0001c0001t0080g0218 a0001c0001t0019g0190 a0001c0001t0080g0218	2	280	0.0071	-22	c.75+ others(39): Show c.75+14568_75+14589delTGTGTGTGTGTGTGTGTGCGCG	SH3PXD2B	ENSG00000174705.13	transcript	ENST00000311601.6	protein_coding	1/12		chr5	TogoVar
SH3RF1_chr4_169089259_169275956	169187516	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG03486.hp2 HG02055.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0002 a0001c0006t0002 a0001c0001t0002 a0001c0006t0002	a0001c0001t0002g0193 a0001c0006t0002g0033 a0001c0001t0002g0193 a0001c0006t0002g0033	2	216	0.0093	-22	c.394 others(41): Show c.394-30859_394-30838delCACACACACACACACACACACA	SH3RF1	ENSG00000154447.15	transcript	ENST00000284637.14	protein_coding	2/11		chr4	TogoVar

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