regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SMARCAL1_chr2_216407484_216488053 | 216411392 | CAAAAAAA others(15): Show |
C | upstream_gene_variant | MODIFIER | NA18950.hp1 NA18990.hp1 NA18993.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0020a0001c0001t0001g0251others(1): Show | 4 | 408 | 0.0098 | -22 | c.-13 others(33): Show |
SMARCAL1 | ENSG00000138375.14 | transcript | ENST00000357276.9 | protein_coding | 1091 | chr2 | TogoVar | ||||||
SMARCB1_chr22_23781966_23843009 | 23820891 | GGCTGTGT others(15): Show |
G | intron_variant | MODIFIER | HG01109.hp1 HG02486.hp2 HG02809.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0027a0001c0001t0034 | a0001c0001t0003g0214a0001c0001t0003g0216a0001c0001t0027g0215others(1): Show | 4 | 363 | 0.0110 | -22 | c.795 others(39): Show |
SMARCB1 | ENSG00000099956.20 | transcript | ENST00000644036.2 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
SMARCB1_chr22_23781966_23843009 | 23822957 | CTTTTTTT others(15): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00642.hp1 HG00738.hp1 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0043 | a0001c0002t0003g0177a0001c0002t0003g0178a0001c0002t0003g0180others(2): Show | 5 | 363 | 0.0138 | -22 | c.796 others(39): Show |
SMARCB1 | ENSG00000099956.20 | transcript | ENST00000644036.2 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
SMARCC1_chr3_47580269_47786893 | 47633775 | TATATACA others(15): Show |
T | intron_variant | MODIFIER | HG01074.hp2 HG02615.hp2 HG02965.hp2 others(1): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0002a0001c0009t0002 | a0001c0001t0002g0089a0001c0001t0002g0140a0001c0001t0002g0166others(1): Show | 4 | 219 | 0.0183 | -22 | c.264 others(41): Show |
SMARCC1 | ENSG00000173473.11 | transcript | ENST00000254480.10 | protein_coding | 24/27 | chr3 | TogoVar | ||||||
SMARCC1_chr3_47580269_47786893 | 47633777 | TATACACA others(15): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00544.hp2 others(70): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(5): Show | a0001c0001t0001g0130a0001c0001t0002g0003a0001c0001t0002g0083others(70): Show | 73 | 219 | 0.3333 | -22 | c.264 others(41): Show |
SMARCC1 | ENSG00000173473.11 | transcript | ENST00000254480.10 | protein_coding | 24/27 | chr3 | TogoVar | ||||||
SMC3_chr10_110562695_110611048 | 110571770 | ATTTAAAT others(15): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00423.hp2 others(170): Show |
a0001 | a0001c0001a0001c0004a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(117): Show | 173 | 328 | 0.5274 | -22 | c.92- others(37): Show |
SMC3 | ENSG00000108055.11 | transcript | ENST00000361804.5 | protein_coding | 2/28 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
SMC6_chr2_17658812_17758810 | 17739879 | AACACACA others(15): Show |
A | intron_variant | MODIFIER | HG03579.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0147 | 1 | 254 | 0.0039 | -22 | c.239 others(39): Show |
SMC6 | ENSG00000163029.16 | transcript | ENST00000448223.7 | protein_coding | 4/27 | chr2 | TogoVar | ||||||
SMCHD1_chr18_2650726_2810017 | 2708867 | CATATATA others(15): Show |
C | intron_variant | MODIFIER | HG02015.hp1 HG02040.hp2 NA18983.hp1 others(1): Show |
a0001a0002 | a0001c0004a0002c0006 | a0001c0004t0002a0001c0004t0012a0002c0006t0002 | a0001c0004t0002g0045a0001c0004t0002g0340a0001c0004t0012g0086others(1): Show | 4 | 340 | 0.0118 | -22 | c.226 others(39): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 17/47 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
SMCO4_chr11_93473472_93548391 | 93514374 | CTATATAT others(15): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02451.hp1 HG02622.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0018 | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0059others(2): Show | 7 | 412 | 0.0170 | -22 | c.-15 others(43): Show |
SMCO4 | ENSG00000166002.7 | transcript | ENST00000298966.7 | protein_coding | 1/2 | chr11 | TogoVar | ||||||
SMCO4_chr11_93473472_93548391 | 93534213 | TATACACA others(15): Show |
T | intron_variant | MODIFIER | HG02074.hp2 HG02132.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0144a0001c0001t0001g0145 | 2 | 412 | 0.0049 | -22 | c.-15 others(41): Show |
SMCO4 | ENSG00000166002.7 | transcript | ENST00000298966.7 | protein_coding | 1/2 | chr11 | TogoVar | ||||||
SMCO4_chr11_93473472_93548391 | 93534215 | TACACACA others(15): Show |
T | intron_variant | MODIFIER | HG02970.hp1 NA19067.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0010 | a0001c0001t0003g0079a0001c0001t0010g0224 | 2 | 412 | 0.0049 | -22 | c.-15 others(41): Show |
SMCO4 | ENSG00000166002.7 | transcript | ENST00000298966.7 | protein_coding | 1/2 | chr11 | TogoVar | ||||||
SMG1_chr16_18799860_18931408 | 18849069 | CAAAAAAA others(15): Show |
C | intron_variant | MODIFIER | HG01175.hp1 HG01515.hp1 HG02109.hp1 others(7): Show |
a0001 | a0001c0001a0001c0007a0001c0009 | a0001c0001t0008a0001c0007t0003a0001c0009t0008others(1): Show | a0001c0001t0008g0220a0001c0001t0008g0221a0001c0007t0003g0176others(7): Show | 10 | 300 | 0.0333 | -22 | c.562 others(39): Show |
SMG1 | ENSG00000157106.18 | transcript | ENST00000446231.7 | protein_coding | 36/62 | chr16 | TogoVar | ||||||
SMG6_chr17_2054843_2308785 | 2121587 | CTGTGTGT others(15): Show |
C | intron_variant | MODIFIER | HG02976.hp1 HG03209.hp1 |
a0001a0005 | a0001c0020a0005c0006 | a0001c0020t0004a0005c0006t0004 | a0001c0020t0004g0129a0005c0006t0004g0104 | 2 | 278 | 0.0072 | -22 | c.335 others(43): Show |
SMG6 | ENSG00000070366.14 | transcript | ENST00000263073.11 | protein_coding | 13/18 | chr17 | TogoVar | ||||||
SMG6_chr17_2054843_2308785 | 2236701 | TCACACAC others(15): Show |
T | intron_variant | MODIFIER | HG02109.hp1 | a0025 | a0025c0014 | a0025c0014t0012 | a0025c0014t0012g0135 | 1 | 278 | 0.0036 | -22 | c.272 others(37): Show |
SMG6 | ENSG00000070366.14 | transcript | ENST00000263073.11 | protein_coding | 9/18 | chr17 | TogoVar | ||||||
SMG8_chr17_59205035_59220230 | 59219059 | ATTTTTTT others(15): Show |
A | downstream_gene_variant | MODIFIER | HG03516.hp2 NA18906.hp1 NA19240.hp1 |
a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0001 | 3 | 394 | 0.0076 | -22 | c.*40 others(33): Show |
SMG8 | ENSG00000167447.13 | transcript | ENST00000300917.10 | protein_coding | 3830 | chr17 | TogoVar | ||||||
SMIM10L1_chr12_11166194_11181016 | 11168398 | AAGAAAGA others(15): Show |
A | upstream_gene_variant | MODIFIER | NA18979.hp2 | a0001 | a0001c0001 | a0001c0001t0031 | a0001c0001t0031g0000 | 1 | 397 | 0.0025 | -22 | c.-29 others(33): Show |
SMIM10L1 | ENSG00000256537.5 | transcript | ENST00000622602.2 | protein_coding | 2795 | chr12 | TogoVar | ||||||
SMIM10_chrX_134985991_134997473 | 134986764 | TCCTTTCT others(15): Show |
T | upstream_gene_variant | MODIFIER | HG02258.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0000 | 1 | 322 | 0.0031 | -22 | c.-43 others(33): Show |
SMIM10 | ENSG00000184785.6 | transcript | ENST00000330288.6 | protein_coding | 4226 | chrX | TogoVar | ||||||
SMIM14_chr4_39541336_39643865 | 39576672 | ATATATAT others(15): Show |
A | intron_variant | MODIFIER | NA18972.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0092 | 1 | 344 | 0.0029 | -22 | c.76- others(37): Show |
SMIM14 | ENSG00000163683.12 | transcript | ENST00000295958.10 | protein_coding | 2/4 | chr4 | TogoVar | ||||||
SMIM14_chr4_39541336_39643865 | 39619482 | ATATCAAT others(15): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp2 HG00544.hp2 others(51): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0102a0001c0001t0001g0103a0001c0001t0001g0106others(51): Show | 54 | 344 | 0.1570 | -22 | c.-35 others(41): Show |
SMIM14 | ENSG00000163683.12 | transcript | ENST00000295958.10 | protein_coding | 1/4 | chr4 | TogoVar | ||||||
SMIM14_chr4_39541336_39643865 | 39619506 | ATATCAAT others(15): Show |
A | intron_variant | MODIFIER | HG02129.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0018 | 1 | 344 | 0.0029 | -22 | c.-35 others(41): Show |
SMIM14 | ENSG00000163683.12 | transcript | ENST00000295958.10 | protein_coding | 1/4 | chr4 | TogoVar | ||||||
SMIM18_chr8_30633580_30651064 | 30650652 | CGCCAGCA others(15): Show |
C | downstream_gene_variant | MODIFIER | HG00738.hp2 HG03225.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0084a0001c0001t0001g0085 | 2 | 430 | 0.0047 | -22 | c.*50 others(33): Show |
SMIM18 | ENSG00000253457.4 | transcript | ENST00000517349.2 | protein_coding | 4589 | chr8 | TogoVar | ||||||
SMIM21_chr18_75404476_75432703 | 75426631 | TAAAAAAA others(15): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(95): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0062a0001c0001t0002g0076a0001c0001t0003g0002others(27): Show | 98 | 432 | 0.2269 | -22 | c.129 others(37): Show |
SMIM21 | ENSG00000206026.7 | transcript | ENST00000579022.5 | protein_coding | 1/2 | chr18 | TogoVar | ||||||
SMIM32_chr5_136186468_136198162 | 136197149 | GAAGCAGC others(15): Show |
G | upstream_gene_variant | MODIFIER | NA18953.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 408 | 0.0025 | -22 | c.-46 others(33): Show |
SMIM32 | ENSG00000271824.2 | transcript | ENST00000607574.2 | protein_coding | 3988 | chr5 | TogoVar | ||||||
SMIM35_chr11_117998634_118091963 | 118067860 | CATATATA others(15): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG02615.hp2 |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0084a0001c0001t0006g0085 | 2 | 408 | 0.0049 | -22 | c.7+1 others(37): Show |
SMIM35 | ENSG00000255274.10 | transcript | ENST00000689828.1 | protein_coding | 1/4 | chr11 | TogoVar | ||||||
SMIM35_chr11_117998634_118091963 | 118070731 | TCACTGAG others(15): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp2 others(84): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(17): Show | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0008others(84): Show | 87 | 408 | 0.2132 | -22 | c.7+1 others(37): Show |
SMIM35 | ENSG00000255274.10 | transcript | ENST00000689828.1 | protein_coding | 1/4 | chr11 | TogoVar | ||||||
SMIM46_chr19_14107324_14117476 | 14109979 | TATATATA others(15): Show |
T | downstream_gene_variant | MODIFIER | NA18957.hp1 | a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0000 | 1 | 368 | 0.0027 | -22 | c.*23 others(33): Show |
SMIM46 | ENSG00000289762.1 | transcript | ENST00000699221.1 | protein_coding | 2344 | chr19 | TogoVar | ||||||
SMIM46_chr19_14107324_14117476 | 14109981 | TATATATA others(15): Show |
T | downstream_gene_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0000 | 1 | 368 | 0.0027 | -22 | c.*23 others(33): Show |
SMIM46 | ENSG00000289762.1 | transcript | ENST00000699221.1 | protein_coding | 2342 | chr19 | TogoVar | ||||||
SMOC1_chr14_69874416_70037366 | 69878699 | ATGTGTGT others(15): Show |
A | upstream_gene_variant | MODIFIER | HG00597.hp1 HG00738.hp1 HG01243.hp2 others(14): Show |
a0001a0005a0006 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(7): Show | a0001c0001t0001g0006a0001c0001t0001g0125a0001c0001t0001g0222others(14): Show | 17 | 270 | 0.0630 | -22 | c.-97 others(31): Show |
SMOC1 | ENSG00000198732.11 | transcript | ENST00000361956.8 | protein_coding | 716 | chr14 | TogoVar | ||||||
SMOC1_chr14_69874416_70037366 | 69961270 | GTGTATAT others(15): Show |
G | intron_variant | MODIFIER | HG00741.hp1 HG01069.hp2 HG01256.hp1 others(4): Show |
a0001a0004 | a0001c0001a0004c0012 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(2): Show | a0001c0001t0001g0108a0001c0001t0001g0155a0001c0001t0002g0003others(3): Show | 7 | 270 | 0.0259 | -22 | c.378 others(39): Show |
SMOC1 | ENSG00000198732.11 | transcript | ENST00000361956.8 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SMOC1_chr14_69874416_70037366 | 69961272 | GTATATAT others(15): Show |
G | intron_variant | MODIFIER | HG02647.hp1 HG03486.hp1 NA19043.hp1 others(1): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0001t0008a0001c0007t0001 | a0001c0001t0001g0028a0001c0001t0008g0057a0001c0001t0008g0062others(1): Show | 4 | 270 | 0.0148 | -22 | c.378 others(39): Show |
SMOC1 | ENSG00000198732.11 | transcript | ENST00000361956.8 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168513466 | TACACACA others(15): Show |
T | intron_variant | MODIFIER | NA18960.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0030 | 1 | 180 | 0.0056 | -22 | c.256 others(39): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168613801 | GCCTCTTC others(15): Show |
G | intron_variant | MODIFIER | HG02602.hp2 HG03492.hp1 HG03834.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0121a0001c0001t0001g0173a0001c0001t0001g0174others(1): Show | 4 | 180 | 0.0222 | -22 | c.907 others(39): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 9/12 | chr6 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168669203 | GTCCCCCA others(15): Show |
G | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00741.hp1 HG01069.hp1 others(20): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0003a0001c0001t0006a0001c0001t0009others(7): Show | a0001c0001t0003g0086a0001c0001t0003g0087a0001c0001t0003g0090others(20): Show | 23 | 180 | 0.1278 | -22 | c.*27 others(33): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 1212 | chr6 | TogoVar | ||||||
SMPX_chrX_21700978_21763116 | 21707207 | CTGTCTTA others(15): Show |
C | intron_variant | MODIFIER | NA18956.hp1 NA18966.hp1 NA18968.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0050a0001c0001t0001g0197a0001c0001t0001g0215others(4): Show | 7 | 289 | 0.0242 | -22 | c.*15 others(37): Show |
SMPX | ENSG00000091482.8 | transcript | ENST00000379494.4 | protein_coding | 4/4 | chrX | TogoVar | ||||||
SMPX_chrX_21700978_21763116 | 21728214 | TTCTCTCT others(15): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00423.hp1 others(101): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0006others(85): Show | 104 | 289 | 0.3599 | -22 | c.*14 others(39): Show |
SMPX | ENSG00000091482.8 | transcript | ENST00000379494.4 | protein_coding | 4/4 | chrX | TogoVar | ||||||
SMS_chrX_21935709_21999837 | 21941884 | CAAAAAAA others(15): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp2 HG00597.hp1 others(30): Show |
a0001a0003 | a0001c0001a0003c0006 | a0001c0001t0001a0001c0001t0007a0001c0001t0008others(2): Show | a0001c0001t0001g0003a0001c0001t0001g0006a0001c0001t0001g0228others(30): Show | 33 | 298 | 0.1107 | -22 | c.49+ others(37): Show |
SMS | ENSG00000102172.16 | transcript | ENST00000404933.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SMUG1_chr12_54175366_54193985 | 54185487 | AATAAATA others(15): Show |
A | intron_variant | MODIFIER | HG00438.hp1 HG00597.hp1 HG00735.hp2 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0012 | a0001c0001t0001g0006a0001c0001t0001g0025a0001c0001t0001g0065others(6): Show | 24 | 438 | 0.0548 | -22 | c.-19 others(39): Show |
SMUG1 | ENSG00000123415.16 | transcript | ENST00000682136.1 | protein_coding | 2/3 | chr12 | TogoVar | ||||||
SMUG1_chr12_54175366_54193985 | 54188273 | TAATAATA others(15): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01261.hp1 HG02293.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0151a0001c0001t0001g0152a0001c0001t0001g0153others(4): Show | 10 | 438 | 0.0228 | -22 | c.-10 others(39): Show |
SMUG1 | ENSG00000123415.16 | transcript | ENST00000682136.1 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
SMURF1_chr7_99022440_99149108 | 99063241 | TTATATAT others(15): Show |
T | intron_variant | MODIFIER | HG02015.hp2 HG02886.hp1 HG03654.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0070a0001c0001t0001g0080a0001c0001t0002g0239others(2): Show | 5 | 264 | 0.0189 | -22 | c.56- others(37): Show |
SMURF1 | ENSG00000198742.10 | transcript | ENST00000361368.7 | protein_coding | 1/17 | chr7 | TogoVar | ||||||
SMURF1_chr7_99022440_99149108 | 99146711 | TAAAAAAA others(15): Show |
T | upstream_gene_variant | MODIFIER | HG02615.hp1 HG02809.hp2 HG03225.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0012a0001c0001t0021others(2): Show | a0001c0001t0001g0016a0001c0001t0012g0015a0001c0001t0021g0002others(2): Show | 5 | 264 | 0.0189 | -22 | c.-29 others(33): Show |
SMURF1 | ENSG00000198742.10 | transcript | ENST00000361368.7 | protein_coding | 2604 | chr7 | TogoVar | ||||||
SMYD2_chr1_214276159_214342131 | 214293011 | TTGTGTGT others(15): Show |
T | intron_variant | MODIFIER | HG01069.hp1 HG01071.hp2 HG02055.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0041a0001c0001t0001g0042a0001c0001t0001g0043others(11): Show | 14 | 380 | 0.0368 | -22 | c.173 others(41): Show |
SMYD2 | ENSG00000143499.14 | transcript | ENST00000366957.10 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SMYD3_chr1_245744347_246512279 | 245813860 | CTATATAT others(15): Show |
C | intron_variant | MODIFIER | HG00544.hp2 HG00597.hp2 HG00741.hp1 others(21): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(5): Show | a0001c0001t0001g0042a0001c0001t0001g0075a0001c0001t0001g0089others(21): Show | 24 | 150 | 0.1600 | -22 | c.107 others(43): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 10/11 | chr1 | TogoVar | ||||||
SMYD3_chr1_245744347_246512279 | 245993577 | AAAAGATA others(15): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00597.hp1 HG01175.hp1 others(17): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(2): Show | a0001c0001t0001g0042a0001c0001t0001g0044a0001c0001t0002g0004others(17): Show | 20 | 150 | 0.1333 | -22 | c.532 others(41): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | ||||||
SMYD3_chr1_245744347_246512279 | 246116201 | GACACACA others(15): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00733.hp2 HG01109.hp1 others(18): Show |
a0001a0002 | a0001c0002a0002c0003a0002c0004others(4): Show | a0001c0002t0001a0001c0002t0002a0002c0003t0001others(9): Show | a0001c0002t0001g0024a0001c0002t0002g0077a0002c0003t0001g0096others(18): Show | 21 | 150 | 0.1400 | -22 | c.532 others(43): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | ||||||
SMYD3_chr1_245744347_246512279 | 246249299 | TCACCATG others(15): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00423.hp1 HG00423.hp2 others(51): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0006others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(15): Show | a0001c0001t0001g0006a0001c0001t0001g0008a0001c0001t0001g0038others(51): Show | 54 | 150 | 0.3600 | -22 | c.531 others(41): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | ||||||
SMYD4_chr17_1774485_1834902 | 1833346 | TTGCATGA others(15): Show |
T | upstream_gene_variant | MODIFIER | NA19064.hp2 | a0005 | a0005c0004 | a0005c0004t0003 | a0005c0004t0003g0158 | 1 | 390 | 0.0026 | -22 | c.-36 others(33): Show |
SMYD4 | ENSG00000186532.12 | transcript | ENST00000305513.12 | protein_coding | 3445 | chr17 | TogoVar | ||||||
SNAP29_chr22_20854007_20896214 | 20874349 | CCACACAC others(15): Show |
C | intron_variant | MODIFIER | HG00673.hp2 HG01074.hp1 HG01123.hp1 others(27): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0021a0001c0001t0022others(6): Show | a0001c0001t0003g0015a0001c0001t0003g0049a0001c0001t0003g0135others(26): Show | 30 | 382 | 0.0785 | -22 | c.434 others(39): Show |
SNAP29 | ENSG00000099940.12 | transcript | ENST00000215730.12 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
SNCG_chr10_86953599_86968258 | 86967150 | CGTGTGTG others(15): Show |
C | downstream_gene_variant | MODIFIER | HG02896.hp1 HG03017.hp2 HG03098.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0008a0002c0002t0002g0015 | 3 | 400 | 0.0075 | -22 | c.*41 others(33): Show |
SNCG | ENSG00000173267.14 | transcript | ENST00000372017.4 | protein_coding | 3893 | chr10 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127953151 | CGTGTGTG others(15): Show |
C | intron_variant | MODIFIER | HG03130.hp1 HG04199.hp1 |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0003a0003c0005t0001 | a0001c0001t0003g0259a0003c0005t0001g0181 | 2 | 262 | 0.0076 | -22 | c.166 others(43): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 15/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
SND1_chr7_127647194_128097593 | 127953200 | GTGTGTGT others(15): Show |
G | intron_variant | MODIFIER | HG02145.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0073 | 1 | 262 | 0.0038 | -22 | c.166 others(43): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 15/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar |