Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TBRG1_chr11_124617864_124640926	124628096	TATATATA others(15): Show TATATATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA19000.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0188 a0001c0001t0001g0188	1	423	0.0024	-22	c.738 others(39): Show c.738+1048_738+1069delTATATATATATATATATATACA	TBRG1	ENSG00000154144.13	transcript	ENST00000441174.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
TBRG1_chr11_124617864_124640926	124628098	TATATATA others(15): Show TATATATATATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0205 a0001c0001t0001g0205	1	448	0.0022	-22	c.738 others(39): Show c.738+1050_738+1071delTATATATATATATATATACACA	TBRG1	ENSG00000154144.13	transcript	ENST00000441174.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
TBRG1_chr11_124617864_124640926	124628100	TATATATA others(15): Show TATATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0142 a0001c0001t0046g0142	1	460	0.0022	-22	c.738 others(39): Show c.738+1052_738+1073delTATATATATATATATACACACA	TBRG1	ENSG00000154144.13	transcript	ENST00000441174.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
TBX15_chr1_118878047_118993343	118984494	AAATATAC others(15): Show AAATATACTTGCAAGGCCGCAGC	A A	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0100 a0001c0001t0002g0100	1	362	0.0028	-22	c.205 others(39): Show c.205+3075_205+3096delGCTGCGGCCTTGCAAGTATATT	TBX15	ENSG00000092607.15	transcript	ENST00000369429.5	protein_coding	1/7			chr1	TogoVar
TBX20_chr7_35197430_35259100	35252095	GCAGCTGG others(15): Show GCAGCTGGGGCTGGCATGTTTCC	G G	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0034	1	300	0.0033	-22	c.127 others(39): Show c.127+1377_127+1398delGGAAACATGCCAGCCCCAGCTG	TBX20	ENSG00000164532.11	transcript	ENST00000408931.4	protein_coding	1/7			chr7	TogoVar
TBX21_chr17_47728236_47751122	47734600	TGTGTGTG others(15): Show TGTGTGTGTGTATGTGTGTGTGG	T T	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02602.hp1 HG02735.hp1 others(6): Show HG01358.hp1 HG02602.hp1 HG02735.hp1 HG03139.hp1 HG03927.hp1 NA18949.hp2 NA19060.hp1 NA19064.hp2 NA20752.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0014 a0001c0002t0003 a0001c0002t0014	a0001c0002t0003g0006 a0001c0002t0003g0021 a0001c0002t0003g0077 others(2): Show a0001c0002t0003g0006 a0001c0002t0003g0021 a0001c0002t0003g0077 a0001c0002t0003g0092 a0001c0002t0014g0096	9	392	0.0230	-22	c.491 others(37): Show c.491+669_491+690delTGTGTGTGGGTGTGTGTGTATG	TBX21	ENSG00000073861.3	transcript	ENST00000177694.2	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr17	TogoVar
TBXAS1_chr7_139824264_140025293	139986739	ACATACAT others(15): Show ACATACATATATATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03130.hp1 HG03209.hp2 others(2): Show HG02717.hp1 HG03130.hp1 HG03209.hp2 HG03486.hp1 HG03516.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0001 a0002c0002t0001 a0004c0004t0001 a0001c0001t0001 a0002c0002t0001 a0004c0004t0001	a0001c0001t0001g0108 a0001c0001t0001g0166 a0002c0002t0001g0059 others(2): Show a0001c0001t0001g0108 a0001c0001t0001g0166 a0002c0002t0001g0059 a0004c0004t0001g0006 a0004c0004t0001g0013	5	214	0.0234	-22	c.113 others(43): Show c.1135-20351_1135-20330delCATACATATATATATATGTGTG	TBXAS1	ENSG00000059377.19	transcript	ENST00000448866.7	protein_coding	9/12			chr7	TogoVar
TCAF1_chr7_143846375_143907176	143897131	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00733.hp2 HG00735.hp2 others(28): Show HG00544.hp1 HG00733.hp2 HG00735.hp2 HG01255.hp1 HG01261.hp1 HG01496.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02145.hp1 HG02155.hp2 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03492.hp1 HG03516.hp1 HG03927.hp2 HG06807.hp1 NA18951.hp2 NA18968.hp2 NA18980.hp1 NA18991.hp2 NA18993.hp2 NA19002.hp2 NA19006.hp2 NA19007.hp2 NA19056.hp1 NA19057.hp2 NA19068.hp2 NA19085.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0002c0008	a0001c0001t0004 a0001c0001t0009 a0001c0001t0011 others(13): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0011 a0001c0001t0014 a0001c0001t0018 a0001c0001t0028 a0001c0001t0035 a0001c0001t0036 a0001c0002t0014 a0001c0002t0019 a0001c0003t0020 a0001c0004t0004 a0001c0004t0009 a0001c0004t0033 a0001c0004t0034 a0002c0008t0014	a0001c0001t0004g0127 a0001c0001t0004g0145 a0001c0001t0004g0148 others(27): Show a0001c0001t0004g0127 a0001c0001t0004g0145 a0001c0001t0004g0148 a0001c0001t0004g0152 a0001c0001t0004g0154 a0001c0001t0004g0156 a0001c0001t0004g0160 a0001c0001t0009g0144 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0009g0162 a0001c0001t0011g0119 a0001c0001t0014g0143 a0001c0001t0018g0004 a0001c0001t0028g0060 a0001c0001t0035g0140 a0001c0001t0036g0153 a0001c0002t0014g0149 a0001c0002t0019g0161 a0001c0003t0020g0126 a0001c0004t0004g0147 a0001c0004t0004g0150 a0001c0004t0004g0151 a0001c0004t0004g0155 a0001c0004t0004g0157 a0001c0004t0004g0163 a0001c0004t0009g0141 a0001c0004t0033g0146 a0001c0004t0034g0142 a0002c0008t0014g0166	31	48	0.6458	-22	c.-15 others(39): Show c.-15+4808_-15+4829delATATATATATATATATATATAT	TCAF1	ENSG00000198420.10	transcript	ENST00000479870.6	protein_coding	1/8			chr7	TogoVar
TCEA3_chr1_23375909_23429748	23399136	GTATATAT others(15): Show GTATATATGTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02132.hp2 NA18945.hp2 HG02132.hp2 NA18945.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0243 a0001c0001t0002g0277 a0001c0001t0002g0243 a0001c0001t0002g0277	2	288	0.0069	-22	c.444 others(39): Show c.444-1203_444-1182delTATATATATATATACATATATA	TCEA3	ENSG00000204219.11	transcript	ENST00000450454.7	protein_coding	5/10			chr1	TogoVar
TCERG1L_chr10_131087391_131316721	131251308	CCCGGCCC others(15): Show CCCGGCCCCTCCTCCCAGCCCAG	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0279 a0001c0001t0002g0279	1	322	0.0031	-22	c.856 others(39): Show c.856+8929_856+8950delCTGGGCTGGGAGGAGGGGCCGG	TCERG1L	ENSG00000176769.9	transcript	ENST00000368642.4	protein_coding	4/11			chr10	TogoVar
TCERG1L_chr10_131087391_131316721	131291401	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0007 a0001c0009t0007	a0001c0009t0007g0311 a0001c0009t0007g0311	1	29	0.0345	-22	c.670 others(41): Show c.670+16788_670+16809delAAAAAAAAAAAAAAAAAAAAAA	TCERG1L	ENSG00000176769.9	transcript	ENST00000368642.4	protein_coding	3/11			chr10	TogoVar
TCF12_chr15_56913644_57294853	56990234	TGTGTGTC others(15): Show TGTGTGTCTGTGTGTGCGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03130.hp2 HG03139.hp2 others(2): Show HG02886.hp1 HG03130.hp2 HG03139.hp2 HG03225.hp2 NA18522.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0136 a0001c0004t0005g0139 a0001c0004t0005g0140 others(2): Show a0001c0004t0005g0136 a0001c0004t0005g0139 a0001c0004t0005g0140 a0001c0004t0005g0141 a0001c0004t0005g0142	5	328	0.0152	-22	c.148 others(41): Show c.148+69143_148+69164delCTGTGTGTGCGTGTGCGTGTGT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57028832	TGTGTCGC others(15): Show TGTGTCGCCCAGGCTGAGGTGCA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0267 a0001c0001t0009g0267	1	328	0.0030	-22	c.149 others(41): Show c.149-34915_149-34894delGTCGCCCAGGCTGAGGTGCAGT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57077325	ATATGTGT others(15): Show ATATGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0275 a0002c0003t0004g0275	1	82	0.0122	-22	c.222 others(41): Show c.222+13504_222+13525delATGTGTGTGTGTGTGTGTGTGT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57222758	ATTTTTTT others(15): Show ATTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0290 a0001c0001t0002g0290	1	15	0.0667	-22	c.580 others(39): Show c.580-8379_580-8358delTTTTTTTTTTTTTTTTTTTTTT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	8/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF12_chr15_56913644_57294853	57254927	GTAATGAA others(15): Show GTAATGAAATAATTTTAATGGTA	G G	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0122 a0001c0001t0006g0122	1	328	0.0030	-22	c.146 others(41): Show c.1467+1464_1467+1485delGAAATAATTTTAATGGTATAAT	TCF12	ENSG00000140262.18	transcript	ENST00000333725.10	protein_coding	16/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
TCF4_chr18_55217185_55593192	55587337	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0025 a0001c0001t0010g0025	1	6	0.1667	-22	c.-20 others(37): Show c.-20-223_-20-202delTTTTTTTTTTTTTTTTTTTTTT	TCF4	ENSG00000196628.20	transcript	ENST00000354452.8	protein_coding	1/19			chr18	TogoVar
TCF7L1_chr2_85128392_85315387	85132053	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0188 a0002c0003t0002g0188	1	11	0.0909	-22	c.-16 others(33): Show c.-1631_-1610delTGTGTGTGTGTGTGTGTGTGTG	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding		1338		chr2	TogoVar
TCF7L1_chr2_85128392_85315387	85282794	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0105 a0001c0001t0002g0105	1	42	0.0238	-22	c.442 others(37): Show c.442-673_442-652delGTGTGTGTGTGTGTGTGTGTGT	TCF7L1	ENSG00000152284.5	transcript	ENST00000282111.4	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TCF7L2_chr10_112945247_113172678	113099163	CAAGCTAA others(15): Show CAAGCTAATTCCAACAGTGGCCA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00408.hp1 others(27): Show HG00280.hp1 HG00323.hp2 HG00408.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp2 HG01256.hp1 HG01258.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01515.hp1 HG01981.hp1 HG02055.hp1 HG02257.hp2 HG02300.hp2 HG02486.hp2 HG02572.hp2 HG02738.hp1 HG02738.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03471.hp1 NA18950.hp1 NA19007.hp2 NA19066.hp1 NA19085.hp2 NA20129.hp1 NA20300.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0013 a0002c0002 others(2): Show a0001c0001 a0001c0013 a0002c0002 a0003c0003 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0022 a0001c0001t0028 a0001c0001t0037 a0001c0001t0038 a0001c0001t0043 a0001c0013t0027 a0002c0002t0001 a0002c0002t0005 a0003c0003t0011 a0004c0006t0001	a0001c0001t0001g0017 a0001c0001t0001g0038 a0001c0001t0001g0047 others(27): Show a0001c0001t0001g0017 a0001c0001t0001g0038 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0099 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0002g0116 a0001c0001t0002g0128 a0001c0001t0002g0173 a0001c0001t0003g0172 a0001c0001t0005g0067 a0001c0001t0005g0199 a0001c0001t0009g0045 a0001c0001t0009g0057 a0001c0001t0010g0098 a0001c0001t0010g0185 a0001c0001t0012g0167 a0001c0001t0022g0050 a0001c0001t0028g0012 a0001c0001t0037g0160 a0001c0001t0038g0110 a0001c0001t0043g0165 a0001c0013t0027g0037 a0002c0002t0001g0090 a0002c0002t0005g0042 a0003c0003t0011g0009 a0004c0006t0001g0039	30	198	0.1515	-22	c.553 others(41): Show c.553-42017_553-41996delCTAATTCCAACAGTGGCCAAAG	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCF7L2_chr10_112945247_113172678	113117412	TCTCTCTC others(15): Show TCTCTCTCTCTCTCTCTCTCTCC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02886.hp1 HG03471.hp1 others(1): Show HG02055.hp1 HG02886.hp1 HG03471.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0028 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0028 a0001c0005t0006	a0001c0001t0001g0058 a0001c0001t0002g0006 a0001c0001t0028g0012 others(1): Show a0001c0001t0001g0058 a0001c0001t0002g0006 a0001c0001t0028g0012 a0001c0005t0006g0138	4	198	0.0202	-22	c.553 others(41): Show c.553-23750_553-23729delCCTCTCTCTCTCTCTCTCTCTC	TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
TCP11L1_chr11_33034572_33078550	33036536	TAAAAAAA others(15): Show TAAAAAAAAAAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0003 a0001c0002t0001g0003	1	149	0.0067	-22	c.-32 others(33): Show c.-3280_-3259delAAAAAAAAAAAAAAAAAAAAAA	TCP11L1	ENSG00000176148.16	transcript	ENST00000334274.9	protein_coding		3035		chr11	TogoVar
TCP11L2_chr12_106297733_106352003	106302320	CCCCCCGC others(15): Show CCCCCCGCTCAGCCCCCGCTCAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG00741.hp1 HG01981.hp1 others(2): Show HG00738.hp1 HG00741.hp1 HG01981.hp1 HG03942.hp1 HG04204.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0009 a0002c0002t0001 others(1): Show a0001c0001t0003 a0001c0001t0009 a0002c0002t0001 a0002c0002t0003	a0001c0001t0003g0120 a0001c0001t0009g0143 a0002c0002t0001g0021 others(2): Show a0001c0001t0003g0120 a0001c0001t0009g0143 a0002c0002t0001g0021 a0002c0002t0001g0086 a0002c0002t0003g0163	5	236	0.0212	-22	c.-65 others(31): Show c.-656_-635delCCCCCGCTCAGCCCCCGCTCAG	TCP11L2	ENSG00000166046.11	transcript	ENST00000299045.8	protein_coding		412		chr12	TogoVar
TCTE1_chr6_44273734_44302698	44298649	CTCAGCAG others(15): Show CTCAGCAGTGCCTTACCAGCAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0017 a0004c0005t0017	a0004c0005t0017g0158 a0004c0005t0017g0158	1	362	0.0028	-22	c.-11 others(33): Show c.-1106_-1085delTTTGCTGGTAAGGCACTGCTGA	TCTE1	ENSG00000146221.10	transcript	ENST00000371505.5	protein_coding		952		chr6	TogoVar
TCTN3_chr10_95658401_95698927	95688407	AAAAAAAA others(15): Show AAAAAAAAAAAAGAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02523.hp2 NA18966.hp1 others(2): Show HG02165.hp2 HG02523.hp2 NA18966.hp1 NA19009.hp2 NA19010.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0005 a0001c0002 a0003c0005	a0001c0002t0001 a0003c0005t0001 a0001c0002t0001 a0003c0005t0001	a0001c0002t0001g0002 a0003c0005t0001g0014 a0001c0002t0001g0002 a0003c0005t0001g0014	5	397	0.0126	-22	c.500 others(37): Show c.500-710_500-689delCTTTTTTTTTCTTTTTTTTTTT	TCTN3	ENSG00000119977.22	transcript	ENST00000371217.10	protein_coding	3/13			chr10	TogoVar
TDGF1_chr3_46572788_46587457	46573531	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02257.hp2 HG03209.hp2 HG02257.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0004 a0001c0001t0002g0004 a0001c0001t0001g0004 a0001c0001t0002g0004	2	441	0.0045	-22	c.-44 others(33): Show c.-4438_-4417delAAAAAAAAAAAAAAAAATATAT	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4256		chr3	TogoVar
TDGF1_chr3_46572788_46587457	46573535	AAAAAAAA others(15): Show AAAAAAAAAAAAAATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0026 a0002c0002t0001g0026	1	427	0.0023	-22	c.-44 others(33): Show c.-4434_-4413delAAAAAAAAAAAAATATATATAT	TDGF1	ENSG00000241186.10	transcript	ENST00000296145.6	protein_coding		4252		chr3	TogoVar
TDG_chr12_103960872_103993874	103990078	AATATATA others(15): Show AATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp1 HG00738.hp2 HG01069.hp2 others(31): Show HG00323.hp1 HG00738.hp2 HG01069.hp2 HG01106.hp1 HG01256.hp2 HG01516.hp2 HG01517.hp2 HG01952.hp1 HG01978.hp1 HG02071.hp1 HG02080.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02647.hp1 HG02809.hp1 HG02895.hp2 HG02897.hp1 HG03195.hp1 HG03453.hp1 HG03471.hp2 HG03491.hp1 HG03492.hp1 HG03704.hp1 HG04184.hp2 NA18906.hp1 NA18965.hp1 NA19009.hp1 NA19062.hp2 NA19064.hp2 NA19077.hp2 NA20300.hp1 NA20805.hp2 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0005 a0002c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0005 a0002c0002t0002 a0003c0003t0006	a0001c0001t0001g0022 a0001c0001t0001g0063 a0001c0001t0001g0064 others(22): Show a0001c0001t0001g0022 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0074 a0001c0001t0001g0114 a0001c0001t0001g0242 a0001c0001t0005g0011 a0001c0001t0005g0051 a0001c0001t0005g0052 a0001c0001t0005g0053 a0001c0001t0005g0129 a0001c0001t0005g0132 a0002c0002t0002g0002 a0002c0002t0002g0018 a0002c0002t0002g0058 a0002c0002t0002g0060 a0002c0002t0002g0104 a0002c0002t0002g0135 a0002c0002t0002g0136 a0002c0002t0002g0160 a0002c0002t0002g0177 a0002c0002t0002g0178 a0002c0002t0002g0184 a0003c0003t0006g0038	34	53	0.6415	-22	c.29 others(33): Show c.2989_*3010delATATATATATATATATATATAT	TDG	ENSG00000139372.15	transcript	ENST00000392872.8	protein_coding		1205		chr12	TogoVar
TDO2_chr4_155898696_155925406	155909880	CCTCCCCT others(15): Show CCTCCCCTCCCCTCCCCTCCCCT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	136	0.0074	-22	c.432 others(36): Show c.432-109_432-88delCCCTCCCCTCTCCCCTCCCCTC	TDO2	ENSG00000151790.9	transcript	ENST00000536354.3	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TDP1_chr14_89950927_90049764	89998372	TTATATAT others(15): Show TTATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0032 a0001c0001t0002g0032	1	79	0.0127	-22	c.154 others(41): Show c.1541+4919_1541+4940delATATATATATATATATATATAT	TDP1	ENSG00000042088.14	transcript	ENST00000335725.9	protein_coding	14/16		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDP2_chr6_24644979_24671899	24645840	TACACACA others(15): Show TACACACACACACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01358.hp1 HG02004.hp1 HG02004.hp2 others(3): Show HG01358.hp1 HG02004.hp1 HG02004.hp2 HG02258.hp2 HG03098.hp1 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0002c0002t0001	a0001c0001t0001g0002 a0001c0001t0002g0008 a0001c0001t0002g0104 others(2): Show a0001c0001t0001g0002 a0001c0001t0002g0008 a0001c0001t0002g0104 a0001c0001t0009g0049 a0002c0002t0001g0001	6	17	0.3529	-22	c.49 others(33): Show c.4926_*4947delGTGTGTGTGTGTGTGTGTGTGT	TDP2	ENSG00000111802.14	transcript	ENST00000378198.9	protein_coding		4138		chr6	TogoVar
TDRD12_chr19_32714767_32834580	32739695	ACTCTCTG others(15): Show ACTCTCTGCATCTCCTGGGTACT	A A	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp2 HG01358.hp1 others(1): Show HG01168.hp1 HG01169.hp2 HG01358.hp1 HG01981.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0211 a0002c0003t0001g0265 a0002c0003t0001g0266 others(1): Show a0002c0003t0001g0211 a0002c0003t0001g0265 a0002c0003t0001g0266 a0002c0003t0001g0267	4	376	0.0106	-22	c.320 others(37): Show c.320+708_320+729delCTGCATCTCCTGGGTACTCTCT	TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	3/32		INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32777837	ATATATAT others(15): Show ATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 NA18962.hp2 HG00423.hp2 NA18962.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0011 a0001c0001 a0007c0011	a0001c0001t0004 a0007c0011t0004 a0001c0001t0004 a0007c0011t0004	a0001c0001t0004g0145 a0007c0011t0004g0153 a0001c0001t0004g0145 a0007c0011t0004g0153	2	328	0.0061	-22	c.112 others(39): Show c.1121+610_1121+631delATATATATATATATATATATTT	TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	11/32		INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32777839	ATATATAT others(15): Show ATATATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 NA18956.hp1 NA18960.hp2 others(1): Show HG01261.hp2 NA18956.hp1 NA18960.hp2 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0030 a0001c0001t0004 a0001c0001t0030	a0001c0001t0004g0143 a0001c0001t0004g0170 a0001c0001t0004g0175 others(1): Show a0001c0001t0004g0143 a0001c0001t0004g0170 a0001c0001t0004g0175 a0001c0001t0030g0166	4	356	0.0112	-22	c.112 others(39): Show c.1121+612_1121+633delATATATATATATATATATTTTT	TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	11/32		INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32777841	ATATATAT others(15): Show ATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18983.hp1 NA18969.hp2 NA18983.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0003 a0002c0003t0001g0003	2	368	0.0054	-22	c.112 others(39): Show c.1121+614_1121+635delATATATATATATATATTTTTTT	TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	11/32		INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD15_chr2_21118968_21149368	21148476	GGAAGGGG others(15): Show GGAAGGGGAATCAATATTTTGTC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	350	0.0029	-22	c.52 others(33): Show c.5205_*5226delGAAGGGGAATCAATATTTTGTC	TDRD15	ENSG00000218819.6	transcript	ENST00000405799.3	protein_coding		4109		chr2	TogoVar
TDRD3_chr13_60392220_60578871	60496288	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA18970.hp1 NA19062.hp2 HG02055.hp2 NA18970.hp1 NA19062.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0006c0008t0002 a0001c0001t0001 a0001c0001t0002 a0006c0008t0002	a0001c0001t0001g0236 a0001c0001t0002g0120 a0006c0008t0002g0119 a0001c0001t0001g0236 a0001c0001t0002g0120 a0006c0008t0002g0119	3	42	0.0714	-22	c.858 others(39): Show c.858+1748_858+1769delATATATATATATATATATATAT	TDRD3	ENSG00000083544.16	transcript	ENST00000377881.8	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr13	TogoVar
TDRD9_chr14_103923456_104057667	103952206	ATATATAT others(15): Show ATATATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0344 a0001c0003t0002g0344	1	356	0.0028	-22	c.216 others(39): Show c.216-3456_216-3435delATATATATATATATTTTTTTTT	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	1/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103952208	ATATATAT others(15): Show ATATATATATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0003 a0003	a0003c0016 a0003c0016	a0003c0016t0005 a0003c0016t0005	a0003c0016t0005g0340 a0003c0016t0005g0340	1	364	0.0027	-22	c.216 others(39): Show c.216-3454_216-3433delATATATATATATTTTTTTTTTT	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	1/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103952212	ATATATAT others(15): Show ATATATATATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02040.hp2 NA19070.hp2 HG02040.hp2 NA19070.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0005 a0001c0002 a0002c0005	a0001c0002t0002 a0002c0005t0002 a0001c0002t0002 a0002c0005t0002	a0001c0002t0002g0064 a0002c0005t0002g0041 a0001c0002t0002g0064 a0002c0005t0002g0041	2	339	0.0059	-22	c.216 others(39): Show c.216-3450_216-3429delATATATATTTTTTTTTTTTTTT	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	1/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103952214	ATATATAT others(15): Show ATATATATTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01169.hp2 HG00673.hp1 HG01169.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0049 a0001c0002t0002g0320 a0001c0002t0002g0049 a0001c0002t0002g0320	2	328	0.0061	-22	c.216 others(39): Show c.216-3448_216-3427delATATATTTTTTTTTTTTTTTTT	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	1/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103956097	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19070.hp1 NA19070.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0021 a0001c0003t0004g0021	1	370	0.0027	-22	c.322 others(37): Show c.322+329_322+350delAAAAAAAAAAAAAATATATATA	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	2/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103956099	AAAAAAAA others(15): Show AAAAAAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0018 a0001c0003t0001g0018	1	367	0.0027	-22	c.322 others(37): Show c.322+331_322+352delAAAAAAAAAAAATATATATATA	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	2/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	103956101	AAAAAAAA others(15): Show AAAAAAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00621.hp2 HG01978.hp1 others(1): Show HG00609.hp2 HG00621.hp2 HG01978.hp1 NA18965.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0007 a0001c0003t0001 a0001c0003t0007	a0001c0003t0001g0017 a0001c0003t0007g0025 a0001c0003t0007g0026 others(1): Show a0001c0003t0001g0017 a0001c0003t0007g0025 a0001c0003t0007g0026 a0001c0003t0007g0120	4	365	0.0110	-22	c.322 others(37): Show c.322+333_322+354delAAAAAAAAAATATATATATATA	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	2/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TDRD9_chr14_103923456_104057667	104024749	TACACACA others(15): Show TACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0150 a0001c0001t0001g0150	1	37	0.0270	-22	c.271 others(38): Show c.2718+89_2718+110delCACACACACACACACACACACA	TDRD9	ENSG00000156414.20	transcript	ENST00000409874.9	protein_coding	25/35		INFO_REALIGN_3_PRIME	chr14	TogoVar
TEAD1_chr11_12669421_12949737	12719973	TTTTTTTT others(15): Show TTTTTTTTTTTTTTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG02602.hp1 NA18982.hp1 HG02602.hp1 NA18982.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0152 a0001c0002t0002g0153 a0001c0001t0002g0152 a0001c0002t0002g0153	2	204	0.0098	-22	c.-54 others(41): Show c.-54-44205_-54-44184delTTTTTTTTTTTTTTTTTTTTTG	TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	2/12		WARNING_TRANSCRIPT_NO_START_CODON	chr11	TogoVar
TEAD1_chr11_12669421_12949737	12781968	AAAAGAAA others(15): Show AAAAGAAAGAAAAAAAGAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG02622.hp2 NA19030.hp1 HG02622.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0030 a0001c0001t0012g0028 a0001c0001t0001g0030 a0001c0001t0012g0028	2	196	0.0102	-22	c.202 others(41): Show c.202+17538_202+17559delGAAAGAAAAAAAGAAAAAGAAA	TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	3/12		WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TEAD1_chr11_12669421_12949737	12814775	CTCTGTGT others(15): Show CTCTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0040 a0001c0002t0040	a0001c0002t0040g0008 a0001c0002t0040g0008	1	141	0.0071	-22	c.203 others(41): Show c.203-47473_203-47452delCTGTGTGTGTGTGTGTGTGTGT	TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	3/12		WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TEAD1_chr11_12669421_12949737	12814777	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02615.hp1 HG02922.hp1 others(5): Show HG02258.hp1 HG02615.hp1 HG02922.hp1 HG03209.hp2 HG03225.hp2 HG03579.hp1 NA18522.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 others(3): Show a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 a0001c0001t0019 a0001c0002t0022 a0001c0002t0042	a0001c0001t0006g0007 a0001c0001t0006g0015 a0001c0001t0009g0014 others(5): Show a0001c0001t0006g0007 a0001c0001t0006g0015 a0001c0001t0009g0014 a0001c0001t0009g0017 a0001c0001t0013g0016 a0001c0001t0019g0013 a0001c0002t0022g0023 a0001c0002t0042g0108	8	81	0.0988	-22	c.203 others(41): Show c.203-47431_203-47410delGTGTGTGTGTGTGTGTGTGTGT	TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	3/12		WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TEAD4_chr12_2954397_3045676	3013875	ATCTCTGA others(15): Show ATCTCTGAAAATATTTTTTATAT	A A	intron_variant intron_variant	MODIFIER	HG00597.hp2 NA18948.hp2 HG00597.hp2 NA18948.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0167 a0001c0001t0001g0075 a0001c0001t0001g0167	2	274	0.0073	-22	c.354 others(39): Show c.354+1645_354+1666delCTCTGAAAATATTTTTTATATT	TEAD4	ENSG00000197905.10	transcript	ENST00000359864.8	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr12	TogoVar

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