Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TICAM2_chr5_115573496_115607479	115575083	CATATATA others(15): Show CATATATATATATATATATATAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01257.hp2 NA18997.hp1 NA19075.hp1 HG01257.hp2 NA18997.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0020 a0001c0001t0002 a0001c0001t0020	a0001c0001t0002g0001 a0001c0001t0002g0027 a0001c0001t0020g0049 a0001c0001t0002g0001 a0001c0001t0002g0027 a0001c0001t0020g0049	3	402	0.0075	-22	c.54 others(33): Show c.5444_*5465delATATATATATATATATATATAT	TICAM2	ENSG00000243414.6	transcript	ENST00000427199.3	protein_coding		3412		chr5	TogoVar
TICRR_chr15_89570469_89633023	89629188	GGGGTGGG others(15): Show GGGGTGGGGGCTGTGGGCTGGGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp2 others(124): Show HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp2 HG00597.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp2 HG01257.hp1 HG01261.hp1 HG01346.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01952.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02015.hp2 HG02055.hp2 HG02056.hp2 HG02071.hp2 HG02109.hp2 HG02129.hp2 HG02155.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02602.hp2 HG02630.hp1 HG02647.hp1 HG02723.hp1 HG02735.hp1 HG02738.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02897.hp2 HG03017.hp2 HG03041.hp2 HG03130.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03490.hp2 HG03491.hp2 HG03654.hp2 HG03669.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp1 HG04228.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18944.hp1 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18959.hp1 NA18968.hp2 NA18969.hp2 NA18973.hp1 NA18974.hp2 NA18979.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18988.hp1 NA18990.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp2 NA19001.hp2 NA19002.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19056.hp2 NA19057.hp1 NA19062.hp1 NA19064.hp1 NA19066.hp2 NA19078.hp1 NA19083.hp1 NA19087.hp2 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0004 a0006 others(11): Show a0001 a0004 a0006 a0007 a0008 a0011 a0014 a0015 a0016 a0019 a0020 a0022 a0023 a0037	a0001c0002 a0001c0019 a0001c0052 others(17): Show a0001c0002 a0001c0019 a0001c0052 a0001c0053 a0001c0055 a0004c0004 a0006c0005 a0007c0008 a0007c0014 a0008c0010 a0008c0050 a0011c0015 a0014c0022 a0015c0023 a0016c0024 a0019c0054 a0020c0046 a0022c0047 a0023c0049 a0037c0034	a0001c0002t0001 a0001c0019t0001 a0001c0052t0001 others(19): Show a0001c0002t0001 a0001c0019t0001 a0001c0052t0001 a0001c0053t0001 a0001c0055t0001 a0004c0004t0001 a0006c0005t0001 a0006c0005t0003 a0007c0008t0006 a0007c0014t0001 a0008c0010t0001 a0008c0050t0001 a0011c0015t0001 a0011c0015t0006 a0014c0022t0001 a0015c0023t0001 a0016c0024t0001 a0019c0054t0001 a0020c0046t0001 a0022c0047t0003 a0023c0049t0001 a0037c0034t0001	a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0001g0007 others(110): Show a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0010 a0001c0002t0001g0011 a0001c0002t0001g0022 a0001c0002t0001g0023 a0001c0002t0001g0024 a0001c0002t0001g0028 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0045 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0052 a0001c0002t0001g0053 a0001c0002t0001g0054 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0064 a0001c0002t0001g0065 a0001c0002t0001g0077 a0001c0002t0001g0078 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 a0001c0002t0001g0084 a0001c0002t0001g0085 a0001c0002t0001g0089 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0095 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0109 a0001c0002t0001g0112 a0001c0002t0001g0207 a0001c0002t0001g0224 a0001c0002t0001g0225 a0001c0002t0001g0226 a0001c0002t0001g0286 a0001c0002t0001g0287 a0001c0002t0001g0288 a0001c0002t0001g0289 a0001c0019t0001g0099 a0001c0019t0001g0108 a0001c0019t0001g0110 a0001c0052t0001g0039 a0001c0053t0001g0046 a0001c0055t0001g0111 a0004c0004t0001g0230 a0006c0005t0001g0067 a0006c0005t0003g0025 a0006c0005t0003g0026 a0006c0005t0003g0027 a0006c0005t0003g0035 a0006c0005t0003g0066 a0006c0005t0003g0068 a0006c0005t0003g0070 a0006c0005t0003g0072 a0006c0005t0003g0073 a0006c0005t0003g0074 a0006c0005t0003g0086 a0006c0005t0003g0087 a0006c0005t0003g0088 a0006c0005t0003g0100 a0006c0005t0003g0101 a0007c0008t0006g0090 a0007c0014t0001g0273 a0007c0014t0001g0276 a0007c0014t0001g0277 a0007c0014t0001g0281 a0008c0010t0001g0001 a0008c0010t0001g0055 a0008c0010t0001g0056 a0008c0010t0001g0075 a0008c0010t0001g0083 a0008c0050t0001g0001 a0011c0015t0001g0076 a0011c0015t0001g0279 a0011c0015t0006g0091 a0011c0015t0006g0092 a0014c0022t0001g0103 a0014c0022t0001g0104 a0015c0023t0001g0009 a0016c0024t0001g0096 a0016c0024t0001g0102 a0019c0054t0001g0283 a0020c0046t0001g0079 a0022c0047t0003g0071 a0023c0049t0001g0029 a0037c0034t0001g0282	127	344	0.3692	-22	c.21 others(33): Show c.2103_*2124delGGGTGGGGGCTGTGGGCTGGGT	TICRR	ENSG00000140534.14	transcript	ENST00000268138.12	protein_coding		1166		chr15	TogoVar
TIGAR_chr12_4316213_4365028	4318363	GACACGGA others(15): Show GACACGGACACACACACACACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00621.hp2 HG00673.hp2 HG00438.hp1 HG00621.hp2 HG00673.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0001 a0001c0001t0015	a0001c0001t0001g0043 a0001c0001t0001g0266 a0001c0001t0015g0229 a0001c0001t0001g0043 a0001c0001t0001g0266 a0001c0001t0015g0229	3	420	0.0071	-22	c.-29 others(33): Show c.-2908_-2887delACACGGACACACACACACACAC	TIGAR	ENSG00000078237.7	transcript	ENST00000179259.6	protein_coding		2849		chr12	TogoVar
TIGAR_chr12_4316213_4365028	4318369	GACACACA others(15): Show GACACACACACACACACACACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0106 a0001c0001t0106	a0001c0001t0106g0272 a0001c0001t0106g0272	1	420	0.0024	-22	c.-29 others(33): Show c.-2902_-2881delACACACACACACACACACACAC	TIGAR	ENSG00000078237.7	transcript	ENST00000179259.6	protein_coding		2843		chr12	TogoVar
TIGD2_chr4_89106533_89119901	89108551	CACAGAGA others(15): Show CACAGAGAGAGAGAGAGAGAGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG01496.hp1 NA18980.hp1 others(2): Show HG00099.hp1 HG01496.hp1 NA18980.hp1 NA18991.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	5	430	0.0116	-22	c.-42 others(33): Show c.-4240_-4219delACAGAGAGAGAGAGAGAGAGAG	TIGD2	ENSG00000180346.5	transcript	ENST00000603357.3	protein_coding		2981		chr4	TogoVar
TIGD5_chr8_143592831_143608224	143603152	AGCTGAGC others(15): Show AGCTGAGCTCGCCTGGTCAGATG	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0059 a0002c0003t0059	a0002c0003t0059g0000 a0002c0003t0059g0000	1	437	0.0023	-22	c.33 others(33): Show c.3322_*3343delCTGAGCTCGCCTGGTCAGATGG	TIGD5	ENSG00000179886.6	transcript	ENST00000504548.4	protein_coding	1/1	3322	INFO_REALIGN_3_PRIME	chr8	TogoVar
TIMD4_chr5_156914292_156968226	156958313	GGAAAGGA others(15): Show GGAAAGGAAAGGAAAGGAAAGGA	G G	intron_variant intron_variant	MODIFIER	NA19082.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	312	0.0032	-22	c.59- others(37): Show c.59-3579_59-3558delTCCTTTCCTTTCCTTTCCTTTC	TIMD4	ENSG00000145850.9	transcript	ENST00000274532.7	protein_coding	1/8			chr5	TogoVar
TIMM23_chr10_45967489_46008742	45989695	CACACAAG others(15): Show CACACAAGGTCAAAGCCCAGGAA	C C	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0281 a0001c0001t0001g0281	1	400	0.0025	-22	c.514 others(37): Show c.514+849_514+870delACACAAGGTCAAAGCCCAGGAA	TIMM23	ENSG00000265354.4	transcript	ENST00000580018.4	protein_coding	6/6			chr10	TogoVar
TIMM9_chr14_58403495_58432531	58419451	TCACACAC others(15): Show TCACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	NA18963.hp2 NA19001.hp1 NA19057.hp1 others(3): Show NA18963.hp2 NA19001.hp1 NA19057.hp1 NA19066.hp2 NA19070.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0026 a0001c0001t0003g0267 a0001c0001t0003g0268 others(1): Show a0001c0001t0003g0026 a0001c0001t0003g0267 a0001c0001t0003g0268 a0001c0001t0003g0269	6	378	0.0159	-22	c.-27 others(39): Show c.-27+4535_-27+4556delTGTGTGTGTGTGTGTGTGTGTG	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding	3/5			chr14	TogoVar
TIMP3_chr22_32796705_32868041	32825657	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02622.hp1 HG01081.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0260 a0001c0001t0021g0261 a0001c0001t0021g0260 a0001c0001t0021g0261	2	368	0.0054	-22	c.121 others(41): Show c.121+23554_121+23575delAAAAAAAAAAAAAAAAAAAAAA	TIMP3	ENSG00000100234.12	transcript	ENST00000266085.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
TINAGL1_chr1_31571515_31592686	31580191	CTCTCTCT others(15): Show CTCTCTCTCTCTCTCTCTCTCTG	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00639.hp1 others(32): Show HG00099.hp1 HG00140.hp1 HG00639.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01168.hp2 HG01496.hp2 HG01516.hp2 HG01978.hp1 HG02273.hp1 HG02698.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03579.hp1 HG03654.hp1 HG04204.hp1 HG04204.hp2 NA18612.hp2 NA18947.hp2 NA18948.hp2 NA18950.hp1 NA18960.hp2 NA18967.hp1 NA18978.hp1 NA19057.hp1 NA19065.hp2 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006	a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0024 others(14): Show a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0096 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0272 a0001c0001t0001g0279 a0001c0001t0002g0064 a0001c0001t0003g0044 a0001c0001t0006g0245	35	440	0.0796	-22	c.374 others(37): Show c.374+938_374+959delCTCTCTCTGTCTCTCTCTCTCT	TINAGL1	ENSG00000142910.16	transcript	ENST00000271064.12	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
TINAG_chr6_54303441_54395142	54372727	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp2 others(76): Show HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00621.hp2 HG00673.hp2 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01081.hp1 HG01123.hp1 HG01167.hp1 HG01175.hp2 HG01192.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01934.hp1 HG01993.hp2 HG02071.hp1 HG02109.hp1 HG02165.hp1 HG02165.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02602.hp2 HG02615.hp1 HG02698.hp2 HG02886.hp2 HG02965.hp2 HG03669.hp1 HG03704.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04204.hp1 NA18940.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp2 NA18951.hp1 NA18955.hp2 NA18956.hp2 NA18959.hp2 NA18963.hp1 NA18966.hp1 NA18977.hp2 NA18981.hp1 NA18982.hp1 NA18986.hp2 NA18989.hp1 NA18994.hp1 NA18997.hp2 NA19000.hp1 NA19003.hp1 NA19009.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp2 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19066.hp2 NA19068.hp1 NA19077.hp1 NA19080.hp2 NA19083.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0010	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0010c0009	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 others(2): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0005c0005t0001 a0010c0009t0001	a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0038 others(74): Show a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0038 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0089 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0173 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0218 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0250 a0001c0001t0001g0302 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0315 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0343 a0002c0002t0001g0248 a0003c0003t0001g0012 a0003c0003t0001g0041 a0003c0003t0001g0044 a0003c0003t0001g0149 a0005c0005t0001g0293 a0005c0005t0001g0294 a0010c0009t0001g0211 a0010c0009t0001g0212	79	374	0.2112	-22	c.125 others(41): Show c.1251-7775_1251-7754delTATATATATATATATATATATA	TINAG	ENSG00000137251.16	transcript	ENST00000259782.9	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
TJP3_chr19_3703384_3755813	3718210	AAAGTGTG others(15): Show AAAGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03209.hp2 HG03486.hp2 HG02886.hp1 HG03209.hp2 HG03486.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0002c0008 a0005c0010 a0001c0002 a0002c0008 a0005c0010	a0001c0002t0004 a0002c0008t0003 a0005c0010t0004 a0001c0002t0004 a0002c0008t0003 a0005c0010t0004	a0001c0002t0004g0073 a0002c0008t0003g0071 a0005c0010t0004g0034 a0001c0002t0004g0073 a0002c0008t0003g0071 a0005c0010t0004g0034	3	398	0.0075	-22	c.-10 others(39): Show c.-10+9650_-10+9671delAAGTGTGTGTGTGTGTGTGTGT	TJP3	ENSG00000105289.15	transcript	ENST00000541714.7	protein_coding	1/20			chr19	TogoVar
TKTL1_chrX_154290795_154335350	154295415	AGCACCAC others(15): Show AGCACCACCCCCTGACACGTGCG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00423.hp2 others(82): Show HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp2 HG00639.hp2 HG00673.hp1 HG00741.hp2 HG01081.hp2 HG01099.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01243.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01358.hp1 HG01891.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02071.hp1 HG02080.hp2 HG02083.hp1 HG02132.hp1 HG02135.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02738.hp1 HG02809.hp1 HG02922.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03453.hp1 HG03486.hp1 HG03490.hp1 HG03516.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 NA18906.hp2 NA18939.hp2 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18949.hp1 NA18951.hp1 NA18952.hp1 NA18954.hp2 NA18964.hp2 NA18975.hp1 NA18982.hp1 NA18984.hp1 NA19009.hp1 NA19055.hp1 NA19072.hp1 NA19074.hp2 NA19084.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20752.hp1 NA20805.hp1	a0001 a0005 a0007 a0001 a0005 a0007	a0001c0001 a0001c0002 a0005c0008 others(1): Show a0001c0001 a0001c0002 a0005c0008 a0007c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0015 a0001c0002t0001 a0001c0002t0002 a0005c0008t0008 a0007c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(78): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0018 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0107 a0001c0001t0001g0118 a0001c0001t0001g0130 a0001c0001t0001g0222 a0001c0001t0001g0228 a0001c0001t0001g0251 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0259 a0001c0001t0002g0004 a0001c0001t0002g0012 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0026 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0229 a0001c0001t0004g0234 a0001c0001t0004g0250 a0001c0001t0007g0232 a0001c0001t0015g0253 a0001c0002t0001g0258 a0001c0002t0002g0233 a0001c0002t0002g0254 a0005c0008t0008g0014 a0007c0009t0001g0079	85	272	0.3125	-22	c.-44 others(31): Show c.-444_-423delGCACCACCCCCTGACACGTGCG	TKTL1	ENSG00000007350.18	transcript	ENST00000369915.8	protein_coding		379		chrX	TogoVar
TKTL1_chrX_154290795_154335350	154328545	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18985.hp1 NA19086.hp1 NA18985.hp1 NA19086.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0221 a0002c0003t0001g0145 a0001c0001t0001g0221 a0002c0003t0001g0145	2	272	0.0074	-22	c.161 others(39): Show c.1618+613_1618+634delAAAAAAAAAAAAAAAAAAAAAA	TKTL1	ENSG00000007350.18	transcript	ENST00000369915.8	protein_coding	12/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
TLCD4_chr1_95112355_95202607	95138611	TTACTGTA others(15): Show TTACTGTACTGAATACAGTACAG	T T	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02486.hp1 HG03098.hp2 others(2): Show HG00738.hp1 HG02486.hp1 HG03098.hp2 HG03471.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0194 a0001c0001t0005g0191 a0001c0001t0005g0192 others(2): Show a0001c0001t0002g0194 a0001c0001t0005g0191 a0001c0001t0005g0192 a0001c0001t0005g0193 a0001c0001t0005g0195	5	378	0.0132	-22	c.-11 others(39): Show c.-11-5263_-11-5242delGTACAGTACTGTACTGAATACA	TLCD4	ENSG00000152078.10	transcript	ENST00000370203.9	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
TLE2_chr19_2992644_3034280	2998236	AATGTGTG others(15): Show AATGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02615.hp1 HG02622.hp1 others(3): Show HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02965.hp2 HG02970.hp2 HG03540.hp2	a0001 a0001	a0001c0005 a0001c0008 a0001c0005 a0001c0008	a0001c0005t0001 a0001c0005t0002 a0001c0005t0011 others(1): Show a0001c0005t0001 a0001c0005t0002 a0001c0005t0011 a0001c0008t0002	a0001c0005t0001g0149 a0001c0005t0002g0240 a0001c0005t0002g0241 others(3): Show a0001c0005t0001g0149 a0001c0005t0002g0240 a0001c0005t0002g0241 a0001c0005t0002g0364 a0001c0005t0011g0385 a0001c0008t0002g0378	6	404	0.0149	-22	c.212 others(39): Show c.2125-303_2125-282delACACACACACACACACACACAT	TLE2	ENSG00000065717.16	transcript	ENST00000262953.11	protein_coding	19/19			chr19	TogoVar
TLE2_chr19_2992644_3034280	2998237	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02258.hp2 HG02451.hp1 others(2): Show HG01884.hp1 HG02258.hp2 HG02451.hp1 HG02486.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0308 a0001c0001t0002g0238 a0001c0001t0002g0317 others(2): Show a0001c0001t0001g0308 a0001c0001t0002g0238 a0001c0001t0002g0317 a0001c0001t0002g0382 a0001c0001t0002g0383	5	404	0.0124	-22	c.212 others(39): Show c.2125-304_2125-283delCACACACACACACACACACACA	TLE2	ENSG00000065717.16	transcript	ENST00000262953.11	protein_coding	19/19			chr19	TogoVar
TLE2_chr19_2992644_3034280	3031342	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG03041.hp1 HG02486.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0317 a0001c0001t0002g0013 a0001c0001t0002g0317	2	404	0.0050	-22	c.-24 others(33): Show c.-2460_-2439delCACACACACACACACACACACA	TLE2	ENSG00000065717.16	transcript	ENST00000262953.11	protein_coding		2063		chr19	TogoVar
TLE4_chr9_79566965_79731882	79607739	TCTGTTTT others(15): Show TCTGTTTTGGTACCAGTACCATG	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01109.hp1 HG01168.hp1 others(33): Show HG00733.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01433.hp2 HG01891.hp2 HG02027.hp2 HG02055.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02257.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02622.hp2 HG02683.hp2 HG02809.hp2 HG02922.hp1 HG03041.hp1 HG03239.hp2 HG03486.hp2 HG03579.hp2 NA18906.hp1 NA18946.hp2 NA19000.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 others(2): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0010t0013	a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 others(33): Show a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0230 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0249 a0001c0001t0006g0215 a0001c0001t0006g0216 a0001c0001t0010g0210 a0001c0001t0011g0013 a0001c0010t0013g0207	36	258	0.1395	-22	c.253 others(39): Show c.253-4884_253-4863delACCAGTACCATGCTGTTTTGGT	TLE4	ENSG00000106829.21	transcript	ENST00000376552.8	protein_coding	4/19		INFO_REALIGN_3_PRIME	chr9	TogoVar
TLE4_chr9_79566965_79731882	79720377	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0144 a0001c0001t0002g0144	1	258	0.0039	-22	c.183 others(39): Show c.1838+111_1838+132delGTGTGTGTGTGTGTGTGTGTGT	TLE4	ENSG00000106829.21	transcript	ENST00000376552.8	protein_coding	16/19		INFO_REALIGN_3_PRIME	chr9	TogoVar
TLE5_chr19_3047910_3067495	3051702	TTATATAT others(15): Show TTATATATATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp1 HG03453.hp1 NA19057.hp2 HG02622.hp1 HG03453.hp1 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0001 a0001c0001t0002 a0001c0001t0007	a0001c0001t0001g0013 a0001c0001t0002g0104 a0001c0001t0007g0048 a0001c0001t0001g0013 a0001c0001t0002g0104 a0001c0001t0007g0048	3	410	0.0073	-22	c.20 others(33): Show c.2095_*2116delTATATATATATATATATATATA	TLE5	ENSG00000104964.15	transcript	ENST00000327141.9	protein_coding		1207		chr19	TogoVar
TLE6_chr19_2972564_3000179	2986071	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0040 a0001c0003t0001g0040	1	410	0.0024	-22	c.223 others(37): Show c.223-740_223-719delAAAAAAAAAAAAAAAAAAAAAA	TLE6	ENSG00000104953.20	transcript	ENST00000246112.9	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr19	TogoVar
TLE6_chr19_2972564_3000179	2990650	TAAATACA others(15): Show TAAATACATAAATATATACATAA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00741.hp1 HG01070.hp2 others(88): Show HG00099.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp1 HG01099.hp1 HG01109.hp2 HG01123.hp2 HG01168.hp1 HG01175.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01433.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp2 HG01975.hp2 HG02074.hp1 HG02109.hp2 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02738.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03710.hp2 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18944.hp1 NA18952.hp1 NA18968.hp1 NA18980.hp1 NA19030.hp1 NA19043.hp1 NA19083.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20905.hp2	a0001 a0003 a0001 a0003	a0001c0003 a0001c0004 a0001c0005 others(5): Show a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0008 a0001c0009 a0001c0010 a0003c0014	a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 others(23): Show a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0005 a0001c0003t0006 a0001c0003t0007 a0001c0003t0008 a0001c0003t0010 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0004 a0001c0004t0006 a0001c0004t0007 a0001c0004t0008 a0001c0004t0013 a0001c0004t0014 a0001c0005t0006 a0001c0007t0003 a0001c0007t0010 a0001c0008t0001 a0001c0009t0003 a0001c0009t0004 a0001c0010t0002 a0001c0010t0004 a0003c0014t0006	a0001c0003t0001g0005 a0001c0003t0001g0017 a0001c0003t0001g0025 others(86): Show a0001c0003t0001g0005 a0001c0003t0001g0017 a0001c0003t0001g0025 a0001c0003t0001g0040 a0001c0003t0001g0133 a0001c0003t0001g0157 a0001c0003t0001g0305 a0001c0003t0001g0332 a0001c0003t0002g0016 a0001c0003t0002g0018 a0001c0003t0002g0042 a0001c0003t0002g0145 a0001c0003t0002g0153 a0001c0003t0002g0311 a0001c0003t0003g0005 a0001c0003t0003g0019 a0001c0003t0003g0032 a0001c0003t0003g0331 a0001c0003t0003g0393 a0001c0003t0005g0043 a0001c0003t0005g0154 a0001c0003t0005g0381 a0001c0003t0005g0392 a0001c0003t0006g0015 a0001c0003t0007g0012 a0001c0003t0007g0341 a0001c0003t0007g0342 a0001c0003t0007g0346 a0001c0003t0007g0349 a0001c0003t0007g0352 a0001c0003t0007g0355 a0001c0003t0008g0338 a0001c0003t0008g0339 a0001c0003t0008g0344 a0001c0003t0008g0345 a0001c0003t0008g0353 a0001c0003t0010g0044 a0001c0003t0011g0357 a0001c0003t0011g0360 a0001c0003t0011g0363 a0001c0003t0011g0368 a0001c0004t0001g0024 a0001c0004t0002g0021 a0001c0004t0002g0022 a0001c0004t0002g0026 a0001c0004t0002g0027 a0001c0004t0002g0037 a0001c0004t0002g0039 a0001c0004t0002g0300 a0001c0004t0002g0335 a0001c0004t0002g0379 a0001c0004t0002g0391 a0001c0004t0002g0395 a0001c0004t0004g0028 a0001c0004t0004g0190 a0001c0004t0004g0334 a0001c0004t0006g0038 a0001c0004t0006g0374 a0001c0004t0007g0364 a0001c0004t0008g0013 a0001c0004t0008g0337 a0001c0004t0008g0350 a0001c0004t0008g0394 a0001c0004t0013g0336 a0001c0004t0013g0348 a0001c0004t0014g0351 a0001c0005t0006g0369 a0001c0005t0006g0370 a0001c0005t0006g0372 a0001c0005t0006g0373 a0001c0005t0006g0375 a0001c0005t0006g0376 a0001c0005t0006g0377 a0001c0005t0006g0378 a0001c0005t0006g0390 a0001c0007t0003g0188 a0001c0007t0010g0041 a0001c0007t0010g0187 a0001c0007t0010g0189 a0001c0008t0001g0020 a0001c0008t0001g0023 a0001c0008t0001g0333 a0001c0009t0003g0158 a0001c0009t0003g0312 a0001c0009t0004g0156 a0001c0010t0002g0003 a0001c0010t0002g0159 a0001c0010t0004g0003 a0003c0014t0006g0371	91	410	0.2220	-22	c.124 others(39): Show c.1244+867_1244+888delAATACATAAATATATACATAAA	TLE6	ENSG00000104953.20	transcript	ENST00000246112.9	protein_coding	13/16		INFO_REALIGN_3_PRIME	chr19	TogoVar
TLE6_chr19_2972564_3000179	2991600	GCAAGGGG others(15): Show GCAAGGGGAGGCCTAGGTGAGGC	G G	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG02602.hp2 HG01517.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0086 a0001c0001t0003g0093 a0001c0001t0003g0086 a0001c0001t0003g0093	2	410	0.0049	-22	c.124 others(39): Show c.1245-230_1245-209delTAGGTGAGGCCAAGGGGAGGCC	TLE6	ENSG00000104953.20	transcript	ENST00000246112.9	protein_coding	13/16		INFO_REALIGN_3_PRIME	chr19	TogoVar
TLE6_chr19_2972564_3000179	2998236	AATGTGTG others(15): Show AATGTGTGTGTGTGTGTGTGTGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02615.hp1 HG02622.hp2 others(3): Show HG02109.hp2 HG02615.hp1 HG02622.hp2 HG02965.hp1 HG02970.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0013 a0001c0001 a0001c0003 a0001c0013	a0001c0001t0005 a0001c0003t0001 a0001c0003t0005 others(1): Show a0001c0001t0005 a0001c0003t0001 a0001c0003t0005 a0001c0013t0001	a0001c0001t0005g0388 a0001c0003t0001g0025 a0001c0003t0005g0043 others(3): Show a0001c0001t0005g0388 a0001c0003t0001g0025 a0001c0003t0005g0043 a0001c0003t0005g0154 a0001c0003t0005g0381 a0001c0013t0001g0030	6	410	0.0146	-22	c.32 others(33): Show c.3233_*3254delATGTGTGTGTGTGTGTGTGTGT	TLE6	ENSG00000104953.20	transcript	ENST00000246112.9	protein_coding		3058		chr19	TogoVar
TLE6_chr19_2972564_3000179	2998237	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG02258.hp2 HG02486.hp2 others(1): Show HG01884.hp1 HG02258.hp2 HG02486.hp2 HG02886.hp2	a0001 a0001	a0001c0003 a0001c0007 a0001c0003 a0001c0007	a0001c0003t0002 a0001c0003t0003 a0001c0007t0003 a0001c0003t0002 a0001c0003t0003 a0001c0007t0003	a0001c0003t0002g0034 a0001c0003t0002g0311 a0001c0003t0003g0331 others(1): Show a0001c0003t0002g0034 a0001c0003t0002g0311 a0001c0003t0003g0331 a0001c0007t0003g0188	4	410	0.0098	-22	c.32 others(33): Show c.3234_*3255delTGTGTGTGTGTGTGTGTGTGTG	TLE6	ENSG00000104953.20	transcript	ENST00000246112.9	protein_coding		3059		chr19	TogoVar
TLK1_chr2_170985823_171165893	171135307	GTGTGTGT others(15): Show GTGTGTGTGTGTGTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02647.hp2 HG02896.hp2 others(3): Show HG02486.hp1 HG02647.hp2 HG02896.hp2 HG02897.hp2 HG03453.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0020 a0001c0001t0037 others(1): Show a0001c0001t0011 a0001c0001t0020 a0001c0001t0037 a0001c0001t0045	a0001c0001t0011g0099 a0001c0001t0011g0210 a0001c0001t0020g0142 others(3): Show a0001c0001t0011g0099 a0001c0001t0011g0210 a0001c0001t0020g0142 a0001c0001t0020g0206 a0001c0001t0037g0207 a0001c0001t0045g0251	6	266	0.0226	-22	c.140 others(41): Show c.140-17472_140-17451delTATATATATACACACACACACA	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding	1/20			chr2	TogoVar
TLK1_chr2_170985823_171165893	171143506	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02257.hp1 HG00609.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0141 a0001c0001t0005g0118 a0001c0001t0001g0141 a0001c0001t0005g0118	2	266	0.0075	-22	c.139 others(41): Show c.139+16762_139+16783delTTTTTTTTTTTTTTTTTTTTTT	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding	1/20			chr2	TogoVar
TLK2_chr17_62473825_62620481	62549398	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01081.hp1 HG01243.hp2 others(10): Show HG00140.hp2 HG01081.hp1 HG01243.hp2 HG01358.hp1 HG01952.hp2 HG02165.hp2 HG02897.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp2 HG03490.hp2 HG03492.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0014 a0001c0001t0021 a0001c0001t0001 a0001c0001t0014 a0001c0001t0021	a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0198 others(10): Show a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0198 a0001c0001t0001g0206 a0001c0001t0001g0211 a0001c0001t0001g0218 a0001c0001t0001g0230 a0001c0001t0001g0241 a0001c0001t0001g0246 a0001c0001t0001g0264 a0001c0001t0001g0268 a0001c0001t0014g0221 a0001c0001t0021g0153	13	292	0.0445	-22	c.532 others(39): Show c.532-2886_532-2865delAAAAAAAAAAAAAAAAAAAAAA	TLK2	ENSG00000146872.19	transcript	ENST00000346027.10	protein_coding	7/21		INFO_REALIGN_3_PRIME	chr17	TogoVar
TLL2_chr10_96359608_96518926	96411257	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0066 a0001c0001t0006g0066	1	256	0.0039	-22	c.104 others(39): Show c.1049-805_1049-784delTTTTTTTTTTTTTTTTTTTTTT	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	8/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96459691	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03492.hp1 HG03490.hp1 HG03492.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0188 a0001c0002t0007g0189 a0001c0002t0007g0188 a0001c0002t0007g0189	2	256	0.0078	-22	c.287 others(41): Show c.287-13545_287-13524delATATATATTTTTTTTTTTTTTT	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96459693	AAAAAAAA others(15): Show AAAAAAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02615.hp2 HG03688.hp1 others(4): Show HG02145.hp1 HG02615.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG04204.hp1 NA20129.hp2	a0001 a0010 a0012 a0001 a0010 a0012	a0001c0001 a0001c0002 a0010c0013 others(1): Show a0001c0001 a0001c0002 a0010c0013 a0012c0021	a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 others(4): Show a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 a0001c0002t0004 a0001c0002t0007 a0010c0013t0030 a0012c0021t0001	a0001c0001t0003g0148 a0001c0001t0014g0005 a0001c0001t0015g0004 others(4): Show a0001c0001t0003g0148 a0001c0001t0014g0005 a0001c0001t0015g0004 a0001c0002t0004g0149 a0001c0002t0007g0052 a0010c0013t0030g0193 a0012c0021t0001g0190	7	256	0.0273	-22	c.287 others(41): Show c.287-13547_287-13526delATATATATATTTTTTTTTTTTT	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLN2_chr15_62385550_62849631	62491351	TACACACA others(15): Show TACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0087 a0001c0002t0004g0087	1	144	0.0069	-22	c.-23 others(43): Show c.-237-98312_-237-98291delCACACACACACACACACACACA	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	1/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLN2_chr15_62385550_62849631	62562906	TCACACAC others(15): Show TCACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0060 a0001c0060	a0001c0060t0042 a0001c0060t0042	a0001c0060t0042g0017 a0001c0060t0042g0017	1	144	0.0069	-22	c.-23 others(43): Show c.-237-26737_-237-26716delACACACACACACACACACACAC	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	1/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLN2_chr15_62385550_62849631	62574579	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01515.hp1 HG00741.hp1 HG01515.hp1	a0001 a0012 a0001 a0012	a0001c0005 a0012c0052 a0001c0005 a0012c0052	a0001c0005t0001 a0012c0052t0003 a0001c0005t0001 a0012c0052t0003	a0001c0005t0001g0029 a0012c0052t0003g0105 a0001c0005t0001g0029 a0012c0052t0003g0105	2	144	0.0139	-22	c.-23 others(43): Show c.-237-15089_-237-15068delAAAAAAAAAAAAAAAAAAAAAA	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	1/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLN2_chr15_62385550_62849631	62588665	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0002 a0002	a0002c0033 a0002c0033	a0002c0033t0006 a0002c0033t0006	a0002c0033t0006g0059 a0002c0033t0006g0059	1	144	0.0069	-22	c.-23 others(40): Show c.-237-1001_-237-980delATATATATATATATATATATAT	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	1/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLN2_chr15_62385550_62849631	62742022	GGGGTGTG others(15): Show GGGGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02717.hp1 HG06807.hp1 others(3): Show HG02559.hp2 HG02717.hp1 HG06807.hp1 NA18522.hp2 NA18906.hp2 NA18973.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0002 a0001c0010 a0001c0031 others(3): Show a0001c0002 a0001c0010 a0001c0031 a0002c0014 a0002c0033 a0007c0032	a0001c0002t0004 a0001c0010t0001 a0001c0031t0022 others(3): Show a0001c0002t0004 a0001c0010t0001 a0001c0031t0022 a0002c0014t0023 a0002c0033t0006 a0007c0032t0002	a0001c0002t0004g0083 a0001c0010t0001g0035 a0001c0031t0022g0115 others(3): Show a0001c0002t0004g0083 a0001c0010t0001g0035 a0001c0031t0022g0115 a0002c0014t0023g0094 a0002c0033t0006g0059 a0007c0032t0002g0040	6	144	0.0417	-22	c.402 others(41): Show c.4025+1255_4025+1276delGGTGTGTGTGTGTGTGTGTGTG	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	32/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLR5_chr1_223104404_223148248	223141804	TATATATA others(15): Show TATATATATATATATATATAGAG	T T	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0265	1	368	0.0027	-22	c.-55 others(37): Show c.-554-63_-554-42delCTCTATATATATATATATATAT	TLR5	ENSG00000187554.14	transcript	ENST00000642603.2	protein_coding	1/5			chr1	TogoVar
TLR5_chr1_223104404_223148248	223141806	TATATATA others(15): Show TATATATATATATATATAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02630.hp1 HG03209.hp2 HG00544.hp1 HG02630.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0150 a0001c0001t0001g0220 a0001c0001t0012g0221 a0001c0001t0001g0150 a0001c0001t0001g0220 a0001c0001t0012g0221	3	368	0.0082	-22	c.-55 others(37): Show c.-554-65_-554-44delCTCTCTATATATATATATATAT	TLR5	ENSG00000187554.14	transcript	ENST00000642603.2	protein_coding	1/5			chr1	TogoVar
TLR5_chr1_223104404_223148248	223141808	TATATATA others(15): Show TATATATATATATATAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG04184.hp1 HG02970.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0188 a0001c0001t0001g0132 a0001c0001t0001g0188	2	368	0.0054	-22	c.-55 others(37): Show c.-554-67_-554-46delCTCTCTCTATATATATATATAT	TLR5	ENSG00000187554.14	transcript	ENST00000642603.2	protein_coding	1/5			chr1	TogoVar
TLR6_chr4_38817897_38861817	38858741	AAGAGAGA others(15): Show AAGAGAGAGAGAGAGAGGGAGAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02165.hp1 HG03098.hp2 others(2): Show HG01243.hp2 HG02165.hp1 HG03098.hp2 NA19060.hp1 NA20300.hp2	a0003 a0008 a0003 a0008	a0003c0004 a0008c0010 a0003c0004 a0008c0010	a0003c0004t0007 a0008c0010t0017 a0008c0010t0027 a0003c0004t0007 a0008c0010t0017 a0008c0010t0027	a0003c0004t0007g0225 a0003c0004t0007g0230 a0008c0010t0017g0235 others(2): Show a0003c0004t0007g0225 a0003c0004t0007g0230 a0008c0010t0017g0235 a0008c0010t0017g0236 a0008c0010t0027g0232	5	408	0.0123	-22	c.-20 others(33): Show c.-2067_-2046delCTCTCCCTCTCTCTCTCTCTCT	TLR6	ENSG00000174130.13	transcript	ENST00000508254.6	protein_coding		1925		chr4	TogoVar
TLR7_chrX_12862072_12895361	12870003	AATGGATA others(15): Show AATGGATAAGTACCGTGTATTCC	A A	intron_variant intron_variant	MODIFIER	NA19067.hp1 NA19067.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0117 a0001c0001t0002g0117	1	321	0.0031	-22	c.3+2 others(35): Show c.3+2423_3+2444delATGGATAAGTACCGTGTATTCC	TLR7	ENSG00000196664.5	transcript	ENST00000380659.4	protein_coding	2/2			chrX	TogoVar
TM9SF2_chr13_99496472_99569048	99561688	TCCTTTAA others(15): Show TCCTTTAATATTTTCTCAGAGTA	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02145.hp1 HG02280.hp1 others(5): Show HG01891.hp1 HG02145.hp1 HG02280.hp1 HG02647.hp2 HG02922.hp1 HG02976.hp2 HG03486.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0265 a0001c0001t0003g0266 a0001c0001t0003g0267 others(5): Show a0001c0001t0003g0265 a0001c0001t0003g0266 a0001c0001t0003g0267 a0001c0001t0003g0268 a0001c0001t0003g0269 a0001c0001t0003g0270 a0001c0001t0003g0271 a0001c0001t0003g0272	8	332	0.0241	-22	c.192 others(40): Show c.1925-1001_1925-980delCTTTAATATTTTCTCAGAGTAC	TM9SF2	ENSG00000125304.10	transcript	ENST00000376387.5	protein_coding	16/16		INFO_REALIGN_3_PRIME	chr13	TogoVar
TMC1_chr9_72516608_72843297	72532541	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00621.hp1 NA18954.hp1 HG00621.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0168 a0001c0001t0002g0177 a0001c0001t0002g0168 a0001c0001t0002g0177	2	182	0.0110	-22	c.-42 others(43): Show c.-428+10653_-428+10674delAAAAAAAAAAAAAAAAAAAAAA	TMC1	ENSG00000165091.18	transcript	ENST00000297784.10	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr9	TogoVar
TMC1_chr9_72516608_72843297	72683731	TTTTATAT others(15): Show TTTTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0017 a0001c0003t0017	a0001c0003t0017g0102 a0001c0003t0017g0102	1	182	0.0055	-22	c.17- others(37): Show c.17-4976_17-4955delTTATATATATATATATATATAT	TMC1	ENSG00000165091.18	transcript	ENST00000297784.10	protein_coding	5/23		INFO_REALIGN_3_PRIME	chr9	TogoVar
TMC2_chr20_2531573_2648580	2589270	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0116 a0002c0002t0001g0116	1	344	0.0029	-22	c.835 others(39): Show c.835-3007_835-2986delTGTGTGTGTGTGTGTGTGTGTG	TMC2	ENSG00000149488.14	transcript	ENST00000358864.2	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr20	TogoVar
TMC3_chr15_81326088_81379213	81372349	GACACACA others(15): Show GACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp2 HG02559.hp2 others(3): Show HG01255.hp1 HG01255.hp2 HG02559.hp2 HG02622.hp1 HG03471.hp2 NA20129.hp2	a0001 a0014 a0001 a0014	a0001c0001 a0014c0013 a0001c0001 a0014c0013	a0001c0001t0001 a0014c0013t0002 a0001c0001t0001 a0014c0013t0002	a0001c0001t0001g0040 a0001c0001t0001g0244 a0001c0001t0001g0288 others(2): Show a0001c0001t0001g0040 a0001c0001t0001g0244 a0001c0001t0001g0288 a0001c0001t0001g0289 a0014c0013t0002g0199	6	390	0.0154	-22	c.236 others(37): Show c.236+220_236+241delGTGTGTGTGTGTGTGTGTGTGT	TMC3	ENSG00000188869.13	transcript	ENST00000359440.6	protein_coding	2/21			chr15	TogoVar
TMC4_chr19_54155108_54178160	54171062	CATATATA others(15): Show CATATATATACATATATATGTGT	C C	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0002 a0006c0006t0002	a0006c0006t0002g0394 a0006c0006t0002g0394	1	407	0.0025	-22	c.293 others(37): Show c.293+786_293+807delACACATATATATGTATATATAT	TMC4	ENSG00000167608.12	transcript	ENST00000619895.5	protein_coding	2/14			chr19	TogoVar
TMC5_chr16_19412883_19504113	19465058	TTCCTTCC others(15): Show TTCCTTCCTTCCTTCCTTCCTTC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02257.hp1 HG02738.hp2 others(10): Show HG02145.hp1 HG02257.hp1 HG02738.hp2 HG02976.hp2 HG04115.hp1 NA18612.hp2 NA18963.hp1 NA18978.hp2 NA18979.hp2 NA18983.hp2 NA19012.hp2 NA19070.hp1 NA21309.hp1	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0002c0002 a0010c0014 a0001c0001 a0002c0002 a0010c0014	a0001c0001t0004 a0001c0001t0017 a0002c0002t0001 others(2): Show a0001c0001t0004 a0001c0001t0017 a0002c0002t0001 a0002c0002t0006 a0010c0014t0023	a0001c0001t0004g0126 a0001c0001t0004g0220 a0001c0001t0017g0123 others(10): Show a0001c0001t0004g0126 a0001c0001t0004g0220 a0001c0001t0017g0123 a0002c0002t0001g0192 a0002c0002t0001g0195 a0002c0002t0001g0207 a0002c0002t0001g0278 a0002c0002t0001g0330 a0002c0002t0006g0298 a0002c0002t0006g0299 a0002c0002t0006g0305 a0002c0002t0006g0314 a0010c0014t0023g0010	13	336	0.0387	-22	c.148 others(41): Show c.1486-1023_1486-1002delTCCTTCCTTCCTTCCTTCCTTC	TMC5	ENSG00000103534.17	transcript	ENST00000542583.7	protein_coding	8/21			chr16	TogoVar

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