Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
WDR18_chr19_979345_999557	991691	TGGGGCGG others(15): Show TGGGGCGGGGCCTGGCTGGGACG	T T	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0119 a0002c0003t0001g0119	1	456	0.0022	-22	c.932 others(37): Show c.932-260_932-239delGCGGGGCCTGGCTGGGACGGGG	WDR18	ENSG00000065268.11	transcript	ENST00000585809.6	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
WDR19_chr4_39177529_39290810	39211929	CAGAGAGA others(15): Show CAGAGAGAGAGAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02717.hp2 HG02965.hp1 others(2): Show HG01074.hp2 HG02717.hp2 HG02965.hp1 NA18906.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0201 a0001c0001t0003g0162 a0001c0001t0003g0163 others(2): Show a0001c0001t0002g0201 a0001c0001t0003g0162 a0001c0001t0003g0163 a0001c0001t0003g0164 a0001c0001t0003g0167	5	294	0.0170	-22	c.891 others(39): Show c.891-2636_891-2615delGAGAGAGAGAGAGAGAGAGAGA	WDR19	ENSG00000157796.18	transcript	ENST00000399820.8	protein_coding	9/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
WDR25_chr14_100371485_100535303	100459894	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02451.hp1 HG02572.hp1 others(2): Show HG02055.hp2 HG02451.hp1 HG02572.hp1 HG03540.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 others(2): Show a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0182 a0001c0001t0001g0183	5	228	0.0219	-22	c.823 others(39): Show c.823-8102_823-8081delTATATATATATATATATATATA	WDR25	ENSG00000176473.14	transcript	ENST00000402312.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr14	TogoVar
WDR25_chr14_100371485_100535303	100519722	ACTATATA others(15): Show ACTATATATAGTGTATATATAGT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0089 a0001c0009t0001g0089	1	228	0.0044	-22	c.110 others(41): Show c.1102-6147_1102-6126delCTATATATAGTGTATATATAGT	WDR25	ENSG00000176473.14	transcript	ENST00000402312.8	protein_coding	4/6			chr14	TogoVar
WDR25_chr14_100371485_100535303	100519723	CTATATAT others(15): Show CTATATATAGTGTATATATAGTA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02055.hp1 HG02109.hp2 others(21): Show HG01891.hp2 HG02055.hp1 HG02109.hp2 HG02280.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02965.hp1 HG03098.hp2 HG03209.hp1 HG03453.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA19030.hp1 NA19043.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0002c0002t0001 a0003c0004t0001 a0001c0001t0001 a0002c0002t0001 a0003c0004t0001	a0001c0001t0001g0093 a0001c0001t0001g0175 a0001c0001t0001g0176 others(21): Show a0001c0001t0001g0093 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0191 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0197 a0002c0002t0001g0075 a0002c0002t0001g0076 a0002c0002t0001g0082 a0002c0002t0001g0165 a0002c0002t0001g0166 a0002c0002t0001g0167 a0002c0002t0001g0169 a0002c0002t0001g0170 a0003c0004t0001g0006 a0003c0004t0001g0144 a0003c0004t0001g0145 a0003c0004t0001g0146 a0003c0004t0001g0147	24	228	0.1053	-22	c.110 others(41): Show c.1102-6134_1102-6113delATATATAGTATATATATAGTGT	WDR25	ENSG00000176473.14	transcript	ENST00000402312.8	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr14	TogoVar
WDR27_chr6_169452212_169707029	169706727	TACACACA others(15): Show TACACACACACACACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp1 HG02602.hp2 HG03942.hp1 others(2): Show HG01928.hp1 HG02602.hp2 HG03942.hp1 NA18981.hp2 NA18995.hp2	a0001 a0009 a0020 a0001 a0009 a0020	a0001c0001 a0009c0013 a0020c0019 a0001c0001 a0009c0013 a0020c0019	a0001c0001t0001 a0009c0013t0005 a0020c0019t0001 a0001c0001t0001 a0009c0013t0005 a0020c0019t0001	a0001c0001t0001g0140 a0009c0013t0005g0070 a0009c0013t0005g0074 others(2): Show a0001c0001t0001g0140 a0009c0013t0005g0070 a0009c0013t0005g0074 a0020c0019t0001g0130 a0020c0019t0001g0131	5	294	0.0170	-22	c.-52 others(33): Show c.-5206_-5185delGTGTGTGTGTGTGTGTGTGTGT	WDR27	ENSG00000184465.16	transcript	ENST00000448612.6	protein_coding		4699		chr6	TogoVar
WDR33_chr2_127696027_127816171	127750675	AAAATATA others(15): Show AAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0036 a0001c0001t0017g0036	1	318	0.0031	-22	c.724 others(41): Show c.724+12365_724+12386delATATATATATATATATATATTT	WDR33	ENSG00000136709.12	transcript	ENST00000322313.9	protein_coding	7/21			chr2	TogoVar
WDR35_chr2_19905263_19995105	19984020	TATATATA others(15): Show TATATATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18994.hp1 NA19077.hp2 NA18994.hp1 NA19077.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0206 a0002c0003t0001g0249 a0002c0003t0001g0206 a0002c0003t0001g0249	2	398	0.0050	-22	c.143 others(39): Show c.143-1508_143-1487delGTATATATATATATATATATAT	WDR35	ENSG00000118965.16	transcript	ENST00000281405.9	protein_coding	2/26			chr2	TogoVar
WDR35_chr2_19905263_19995105	19984028	TATATATA others(15): Show TATATATATATATACATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01256.hp2 HG01258.hp1 others(9): Show HG00438.hp1 HG01256.hp2 HG01258.hp1 HG01358.hp1 HG01433.hp1 HG01981.hp1 HG02027.hp2 HG04184.hp1 NA18940.hp1 NA18947.hp1 NA18978.hp1 NA19007.hp2	a0004 a0006 a0004 a0006	a0004c0006 a0006c0008 a0004c0006 a0006c0008	a0004c0006t0005 a0006c0008t0005 a0004c0006t0005 a0006c0008t0005	a0004c0006t0005g0010 a0004c0006t0005g0011 a0004c0006t0005g0140 others(7): Show a0004c0006t0005g0010 a0004c0006t0005g0011 a0004c0006t0005g0140 a0004c0006t0005g0141 a0004c0006t0005g0142 a0004c0006t0005g0148 a0006c0008t0005g0139 a0006c0008t0005g0144 a0006c0008t0005g0145 a0006c0008t0005g0147	12	398	0.0302	-22	c.143 others(39): Show c.143-1516_143-1495delGTATATATGTATATATATATAT	WDR35	ENSG00000118965.16	transcript	ENST00000281405.9	protein_coding	2/26			chr2	TogoVar
WDR41_chr5_77425933_77497316	77473038	AACCAAAA others(15): Show AACCAAAACAGCATGATACTGGT	A A	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0009 a0002c0001t0009	a0002c0001t0009g0066 a0002c0001t0009g0066	1	412	0.0024	-22	c.168 others(39): Show c.168-8251_168-8230delACCAGTATCATGCTGTTTTGGT	WDR41	ENSG00000164253.14	transcript	ENST00000296679.9	protein_coding	2/12			chr5	TogoVar
WDR43_chr2_28889667_28953219	28922536	GAAGAGAG others(15): Show GAAGAGAGGCGATGAGGTCTTAC	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0042 a0001c0001t0023g0042	1	332	0.0030	-22	c.850 others(37): Show c.850-380_850-359delGAGAGGCGATGAGGTCTTACAA	WDR43	ENSG00000163811.12	transcript	ENST00000407426.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
WDR44_chrX_118341106_118454961	118446362	GAGCCCGG others(15): Show GAGCCCGGGCAACATAGAAGACC	G G	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0127 a0001c0002t0004g0127	1	293	0.0034	-22	c.264 others(41): Show c.2647+1888_2647+1909delACCAGCCCGGGCAACATAGAAG	WDR44	ENSG00000131725.14	transcript	ENST00000254029.8	protein_coding	19/19		INFO_REALIGN_3_PRIME	chrX	TogoVar
WDR44_chrX_118341106_118454961	118447875	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG03017.hp1 HG02683.hp2 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0042 a0001c0001t0002g0043	2	293	0.0068	-22	c.264 others(40): Show c.2648-1000_2648-979delTATATATATATATATATATATA	WDR44	ENSG00000131725.14	transcript	ENST00000254029.8	protein_coding	19/19		INFO_REALIGN_3_PRIME	chrX	TogoVar
WDR49_chr3_167473684_167658942	167481787	AAGTTATT others(15): Show AAGTTATTCACTATCACGAGAAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp2 HG02055.hp2 others(8): Show HG01884.hp1 HG01891.hp2 HG02055.hp2 HG02258.hp1 HG02280.hp1 HG02572.hp2 HG02723.hp1 HG02723.hp2 HG03225.hp1 HG03486.hp1 HG03579.hp1	a0001 a0005 a0011 a0001 a0005 a0011	a0001c0001 a0005c0006 a0011c0013 a0001c0001 a0005c0006 a0011c0013	a0001c0001t0001 a0005c0006t0001 a0011c0013t0001 a0001c0001t0001 a0005c0006t0001 a0011c0013t0001	a0001c0001t0001g0001 a0001c0001t0001g0183 a0001c0001t0001g0184 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0196 a0005c0006t0001g0009 a0011c0013t0001g0015	11	210	0.0524	-22	c.303 others(41): Show c.3032-2813_3032-2792delATTCTCGTGATAGTGAATAACT	WDR49	ENSG00000174776.12	transcript	ENST00000682715.1	protein_coding	18/18			chr3	TogoVar
WDR49_chr3_167473684_167658942	167616611	TAGAGTCC others(15): Show TAGAGTCCTATTAAAAAAAAGAG	T T	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG04115.hp1 HG03490.hp2 HG04115.hp1	a0010 a0010	a0010c0014 a0010c0014	a0010c0014t0001 a0010c0014t0001	a0010c0014t0001g0181 a0010c0014t0001g0182 a0010c0014t0001g0181 a0010c0014t0001g0182	2	210	0.0095	-22	c.958 others(39): Show c.958+3796_958+3817delCTCTTTTTTTTAATAGGACTCT	WDR49	ENSG00000174776.12	transcript	ENST00000682715.1	protein_coding	5/18			chr3	TogoVar
WDR64_chr1_241647281_241807777	241771937	CATACATA others(15): Show CATACATACATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03130.hp2 HG03225.hp2 others(2): Show HG02647.hp2 HG03130.hp2 HG03225.hp2 HG03471.hp1 HG03579.hp1	a0002 a0013 a0002 a0013	a0002c0004 a0002c0006 a0013c0031 a0002c0004 a0002c0006 a0013c0031	a0002c0004t0003 a0002c0006t0003 a0013c0031t0003 a0002c0004t0003 a0002c0006t0003 a0013c0031t0003	a0002c0004t0003g0023 a0002c0004t0003g0059 a0002c0004t0003g0210 others(2): Show a0002c0004t0003g0023 a0002c0004t0003g0059 a0002c0004t0003g0210 a0002c0006t0003g0054 a0013c0031t0003g0228	5	326	0.0153	-22	c.229 others(39): Show c.2290+244_2290+265delCATACATATATATATATATATA	WDR64	ENSG00000162843.18	transcript	ENST00000437684.7	protein_coding	19/27		INFO_REALIGN_3_PRIME	chr1	TogoVar
WDR70_chr5_37374318_37758435	37499587	TTCTCTCT others(15): Show TTCTCTCTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02486.hp1 HG02559.hp1 others(3): Show HG02257.hp2 HG02486.hp1 HG02559.hp1 HG02970.hp2 HG03195.hp2 HG03516.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0077 a0001c0003t0001g0079 a0001c0003t0001g0080 others(3): Show a0001c0003t0001g0077 a0001c0003t0001g0079 a0001c0003t0001g0080 a0001c0003t0001g0081 a0001c0003t0001g0082 a0001c0003t0001g0083	6	242	0.0248	-22	c.841 others(41): Show c.841-16906_841-16885delTCTCTCTCTCTCTCTCTCTCTC	WDR70	ENSG00000082068.9	transcript	ENST00000265107.9	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
WDR72_chr15_53508741_53764663	53706346	GTGTGTAT others(15): Show GTGTGTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0302 a0001c0002t0013g0302	1	316	0.0032	-22	c.955 others(37): Show c.955-294_955-273delTATATATATATATATATACACA	WDR72	ENSG00000166415.15	transcript	ENST00000360509.10	protein_coding	9/19			chr15	TogoVar
WDR72_chr15_53508741_53764663	53736998	AACACACA others(15): Show AACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02647.hp2 NA21309.hp2 HG02647.hp2 NA21309.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0005c0005 a0001c0002 a0005c0005	a0001c0002t0006 a0005c0005t0017 a0001c0002t0006 a0005c0005t0017	a0001c0002t0006g0158 a0005c0005t0017g0253 a0001c0002t0006g0158 a0005c0005t0017g0253	2	316	0.0063	-22	c.-12 others(39): Show c.-12-3859_-12-3838delGTGTGTGTGTGTGTGTGTGTGT	WDR72	ENSG00000166415.15	transcript	ENST00000360509.10	protein_coding	1/19			chr15	TogoVar
WDR7_chr18_56646359_57034792	57032801	TTATATAT others(15): Show TTATATATATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00642.hp1 HG02055.hp2 others(9): Show HG00140.hp1 HG00642.hp1 HG02055.hp2 HG02109.hp2 HG02451.hp1 HG02895.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG03130.hp1 HG03130.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007	a0001c0001t0005 a0001c0002t0004 a0001c0003t0005 others(3): Show a0001c0001t0005 a0001c0002t0004 a0001c0003t0005 a0001c0003t0025 a0001c0004t0004 a0001c0007t0004	a0001c0001t0005g0102 a0001c0001t0005g0110 a0001c0001t0005g0114 others(9): Show a0001c0001t0005g0102 a0001c0001t0005g0110 a0001c0001t0005g0114 a0001c0001t0005g0115 a0001c0002t0004g0037 a0001c0002t0004g0038 a0001c0002t0004g0058 a0001c0003t0005g0130 a0001c0003t0005g0133 a0001c0003t0025g0098 a0001c0004t0004g0081 a0001c0007t0004g0007	12	144	0.0833	-22	c.55 others(33): Show c.5595_*5616delTATATATATATATATATATATA	WDR7	ENSG00000091157.15	transcript	ENST00000254442.8	protein_coding		3010		chr18	TogoVar
WDR88_chr19_33127114_33180799	33146474	TCCTTCCT others(15): Show TCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01346.hp2 HG02027.hp2 others(14): Show HG00423.hp1 HG01346.hp2 HG02027.hp2 HG02922.hp1 NA18747.hp2 NA18943.hp1 NA18950.hp1 NA18962.hp2 NA18968.hp1 NA18969.hp2 NA18979.hp2 NA18991.hp2 NA18995.hp2 NA18999.hp1 NA19005.hp1 NA19070.hp2 NA19081.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0005 a0001c0001 a0001c0004 a0002c0005	a0001c0001t0001 a0001c0004t0001 a0002c0005t0001 a0001c0001t0001 a0001c0004t0001 a0002c0005t0001	a0001c0001t0001g0131 a0001c0001t0001g0255 a0001c0001t0001g0270 others(14): Show a0001c0001t0001g0131 a0001c0001t0001g0255 a0001c0001t0001g0270 a0001c0001t0001g0273 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0282 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0004t0001g0231 a0002c0005t0001g0295	17	358	0.0475	-22	c.477 others(39): Show c.477-1159_477-1138delTCCTTCCTTCCCCTTCCTTCCT	WDR88	ENSG00000166359.11	transcript	ENST00000355868.4	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr19	TogoVar
WDR88_chr19_33127114_33180799	33157677	GTGTATGT others(15): Show GTGTATGTATGTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00738.hp1 HG01074.hp2 others(19): Show HG00639.hp1 HG00738.hp1 HG01074.hp2 HG01167.hp1 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01433.hp1 HG01516.hp1 HG01981.hp2 HG02004.hp1 HG02148.hp1 HG02148.hp2 HG02300.hp2 HG02698.hp2 HG02970.hp1 HG03669.hp2 HG03942.hp2 HG06807.hp1 NA18955.hp1 NA18970.hp2 NA19043.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0004 a0001c0006 a0002c0003 others(2): Show a0001c0004 a0001c0006 a0002c0003 a0002c0005 a0004c0009	a0001c0004t0001 a0001c0006t0001 a0002c0003t0001 others(2): Show a0001c0004t0001 a0001c0006t0001 a0002c0003t0001 a0002c0005t0001 a0004c0009t0001	a0001c0004t0001g0040 a0001c0004t0001g0101 a0001c0004t0001g0133 others(19): Show a0001c0004t0001g0040 a0001c0004t0001g0101 a0001c0004t0001g0133 a0001c0004t0001g0135 a0001c0004t0001g0150 a0001c0004t0001g0160 a0001c0004t0001g0175 a0001c0004t0001g0293 a0001c0004t0001g0304 a0001c0004t0001g0305 a0001c0006t0001g0105 a0002c0003t0001g0213 a0002c0005t0001g0187 a0002c0005t0001g0196 a0002c0005t0001g0197 a0002c0005t0001g0198 a0002c0005t0001g0199 a0002c0005t0001g0206 a0002c0005t0001g0228 a0002c0005t0001g0229 a0002c0005t0001g0230 a0004c0009t0001g0027	22	358	0.0615	-22	c.997 others(39): Show c.997+1137_997+1158delGTATGTATGTATATATATATAT	WDR88	ENSG00000166359.11	transcript	ENST00000355868.4	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr19	TogoVar
WDR88_chr19_33127114_33180799	33157679	GTATGTAT others(15): Show GTATGTATGTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0320 a0001c0001t0001g0320	1	358	0.0028	-22	c.997 others(39): Show c.997+1141_997+1162delGTATGTATATATATATATATAT	WDR88	ENSG00000166359.11	transcript	ENST00000355868.4	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr19	TogoVar
WDR88_chr19_33127114_33180799	33157683	GTATGTAT others(15): Show GTATGTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0003 a0003	a0003c0011 a0003c0011	a0003c0011t0001 a0003c0011t0001	a0003c0011t0001g0114 a0003c0011t0001g0114	1	358	0.0028	-22	c.997 others(39): Show c.997+1145_997+1166delGTATATATATATATATATATAT	WDR88	ENSG00000166359.11	transcript	ENST00000355868.4	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr19	TogoVar
WDSUB1_chr2_159230798_159291703	159261878	ATATATAT others(15): Show ATATATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0152 a0003c0004t0002g0152	1	252	0.0040	-22	c.771 others(39): Show c.771-2057_771-2036delAAAATATATATATATATATATA	WDSUB1	ENSG00000196151.11	transcript	ENST00000359774.9	protein_coding	5/10			chr2	TogoVar
WDSUB1_chr2_159230798_159291703	159261880	ATATATAT others(15): Show ATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0157 a0003c0004t0002g0157	1	252	0.0040	-22	c.771 others(39): Show c.771-2059_771-2038delAAAAAATATATATATATATATA	WDSUB1	ENSG00000196151.11	transcript	ENST00000359774.9	protein_coding	5/10			chr2	TogoVar
WDSUB1_chr2_159230798_159291703	159261894	ATATTTTT others(15): Show ATATTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0002 a0002c0007t0002	a0002c0007t0002g0076 a0002c0007t0002g0076	1	252	0.0040	-22	c.771 others(39): Show c.771-2073_771-2052delAAAAAAAAAAAAAAAAAAAATA	WDSUB1	ENSG00000196151.11	transcript	ENST00000359774.9	protein_coding	5/10			chr2	TogoVar
WEE1_chr11_9568670_9594985	9583755	GCGCGCGC others(15): Show GCGCGCGCACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0306 a0001c0002t0003g0306	1	442	0.0023	-22	c.128 others(41): Show c.1289-1501_1289-1480delGCGCGCACACACACACACACAC	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WEE1_chr11_9568670_9594985	9583759	GCGCACAC others(15): Show GCGCACACACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18984.hp1 NA18999.hp2 others(4): Show NA18969.hp2 NA18984.hp1 NA18999.hp2 NA19056.hp1 NA19059.hp2 NA19074.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0004 a0001c0001t0001g0225 a0001c0001t0001g0228 others(1): Show a0001c0001t0001g0004 a0001c0001t0001g0225 a0001c0001t0001g0228 a0001c0002t0001g0004	7	442	0.0158	-22	c.128 others(41): Show c.1289-1497_1289-1476delGCACACACACACACACACACAC	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WEE1_chr11_9568670_9594985	9583784	CACACACA others(15): Show CACACACACACACACACACATAT	C C	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0222 a0001c0001t0001g0222	1	442	0.0023	-22	c.128 others(41): Show c.1289-1472_1289-1451delCACACACACACACACACATATA	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WEE1_chr11_9568670_9594985	9583792	CACACACA others(15): Show CACACACACACATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02897.hp1 HG02886.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0218 a0001c0001t0001g0264 a0001c0001t0001g0218 a0001c0001t0001g0264	2	442	0.0045	-22	c.128 others(41): Show c.1289-1464_1289-1443delCACACACACATATATATATATA	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WEE1_chr11_9568670_9594985	9583794	CACACACA others(15): Show CACACACACATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02970.hp2 HG03041.hp2 HG01261.hp2 HG02970.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0002t0001 a0001c0003t0002 a0001c0001t0001 a0001c0002t0001 a0001c0003t0002	a0001c0001t0001g0245 a0001c0002t0001g0216 a0001c0003t0002g0093 a0001c0001t0001g0245 a0001c0002t0001g0216 a0001c0003t0002g0093	3	442	0.0068	-22	c.128 others(41): Show c.1289-1462_1289-1441delCACACACATATATATATATATA	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WEE1_chr11_9568670_9594985	9583796	CACACACA others(15): Show CACACACATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG02738.hp2 HG01361.hp1 HG02738.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0002 a0001c0004t0002 a0001c0003t0002 a0001c0004t0002	a0001c0003t0002g0086 a0001c0004t0002g0079 a0001c0003t0002g0086 a0001c0004t0002g0079	2	442	0.0045	-22	c.128 others(41): Show c.1289-1460_1289-1439delCACACATATATATATATATATA	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WEE1_chr11_9568670_9594985	9583798	CACACATA others(15): Show CACACATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0091 a0001c0003t0002g0091	1	442	0.0023	-22	c.128 others(41): Show c.1289-1458_1289-1437delCACATATATATATATATATATA	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WEE1_chr11_9568670_9594985	9583802	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0090 a0001c0003t0002g0090	1	442	0.0023	-22	c.128 others(41): Show c.1289-1432_1289-1411delTATATATATATATATATATATA	WEE1	ENSG00000166483.12	transcript	ENST00000450114.7	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
WFDC1_chr16_84289878_84334844	84322145	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGCGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01256.hp1 HG01258.hp1 others(14): Show HG00735.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp2 HG01928.hp1 HG02080.hp2 HG02148.hp2 HG02257.hp2 HG02735.hp1 HG02886.hp1 HG03130.hp2 HG03491.hp2 HG04204.hp2 NA18974.hp1 NA19059.hp1 NA19087.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0026 a0001c0001t0032 a0002c0002t0001 others(2): Show a0001c0001t0026 a0001c0001t0032 a0002c0002t0001 a0002c0002t0002 a0002c0002t0004	a0001c0001t0026g0369 a0001c0001t0032g0420 a0002c0002t0001g0025 others(12): Show a0001c0001t0026g0369 a0001c0001t0032g0420 a0002c0002t0001g0025 a0002c0002t0001g0193 a0002c0002t0001g0240 a0002c0002t0001g0357 a0002c0002t0001g0363 a0002c0002t0002g0022 a0002c0002t0002g0092 a0002c0002t0002g0282 a0002c0002t0002g0383 a0002c0002t0002g0387 a0002c0002t0002g0388 a0002c0002t0002g0410 a0002c0002t0004g0434	17	472	0.0360	-22	c.563 others(39): Show c.563-2259_563-2238delCGTGTGTGTGTGTGTGTGTGTG	WFDC1	ENSG00000103175.11	transcript	ENST00000219454.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
WFDC3_chr20_45769213_45796883	45776600	AAAAAAAA others(15): Show AAAAAAAAAAAAAGAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0350 a0001c0001t0001g0350	1	410	0.0024	-22	c.493 others(37): Show c.493+453_493+474delCTTTTTTTTCTTTTTTTTTTTT	WFDC3	ENSG00000124116.19	transcript	ENST00000243938.9	protein_coding	5/6			chr20	TogoVar
WFDC3_chr20_45769213_45796883	45776617	AAAAAGAA others(15): Show AAAAAGAAAAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0206 a0001c0001t0001g0206	1	410	0.0024	-22	c.493 others(37): Show c.493+436_493+457delATATTTTTTTTTTTTTTCTTTT	WFDC3	ENSG00000124116.19	transcript	ENST00000243938.9	protein_coding	5/6			chr20	TogoVar
WFDC3_chr20_45769213_45796883	45776619	AAAGAAAA others(15): Show AAAGAAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18989.hp1 NA19085.hp1 NA18747.hp1 NA18989.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0207 a0001c0001t0001g0212 a0001c0001t0001g0262 a0001c0001t0001g0207 a0001c0001t0001g0212 a0001c0001t0001g0262	3	410	0.0073	-22	c.493 others(37): Show c.493+434_493+455delATATATTTTTTTTTTTTTTCTT	WFDC3	ENSG00000124116.19	transcript	ENST00000243938.9	protein_coding	5/6			chr20	TogoVar
WHRN_chr9_114397080_114510473	114486951	GTGTGTGT others(15): Show GTGTGTGTGTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp1 HG02622.hp2 others(3): Show HG01109.hp1 HG01243.hp1 HG02622.hp2 HG02895.hp2 HG02897.hp1 NA19240.hp2	a0001 a0004 a0012 others(2): Show a0001 a0004 a0012 a0013 a0015	a0001c0002 a0004c0005 a0012c0017 others(2): Show a0001c0002 a0004c0005 a0012c0017 a0013c0021 a0015c0022	a0001c0002t0004 a0004c0005t0004 a0012c0017t0004 others(2): Show a0001c0002t0004 a0004c0005t0004 a0012c0017t0004 a0013c0021t0004 a0015c0022t0004	a0001c0002t0004g0235 a0004c0005t0004g0240 a0012c0017t0004g0238 others(3): Show a0001c0002t0004g0235 a0004c0005t0004g0240 a0012c0017t0004g0238 a0012c0017t0004g0239 a0013c0021t0004g0234 a0015c0022t0004g0233	6	330	0.0182	-22	c.619 others(39): Show c.619-8202_619-8181delTATATATATATATACACACACA	WHRN	ENSG00000095397.17	transcript	ENST00000362057.4	protein_coding	1/11			chr9	TogoVar
WIPF2_chr17_40214304_40289136	40220573	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA18961.hp2 NA18971.hp2 NA18961.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0255 a0001c0001t0008g0254 a0001c0001t0002g0255 a0001c0001t0008g0254	2	314	0.0064	-22	c.-70 others(39): Show c.-70+1105_-70+1126delATATATATATATATATATATAT	WIPF2	ENSG00000171475.14	transcript	ENST00000323571.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr17	TogoVar
WIPF2_chr17_40214304_40289136	40222654	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02055.hp1 HG02145.hp1 others(3): Show HG01891.hp2 HG02055.hp1 HG02145.hp1 HG02717.hp2 HG03130.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0047 a0001c0001t0055 others(2): Show a0001c0001t0025 a0001c0001t0047 a0001c0001t0055 a0001c0001t0059 a0001c0001t0064	a0001c0001t0025g0137 a0001c0001t0025g0310 a0001c0001t0047g0121 others(3): Show a0001c0001t0025g0137 a0001c0001t0025g0310 a0001c0001t0047g0121 a0001c0001t0055g0122 a0001c0001t0059g0309 a0001c0001t0064g0308	6	314	0.0191	-22	c.-70 others(39): Show c.-70+3174_-70+3195delTTTTTTTTTTTTTTTTTTTTTT	WIPF2	ENSG00000171475.14	transcript	ENST00000323571.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr17	TogoVar
WIPI2_chr7_5185233_5238840	5186703	AAAAAAAA others(15): Show AAAAAAAAAAAATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19074.hp1 NA19084.hp2 NA19074.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0003	2	392	0.0051	-22	c.-37 others(33): Show c.-3716_-3695delAAAAAAAAAAATATATATATAT	WIPI2	ENSG00000157954.15	transcript	ENST00000288828.9	protein_coding		3529		chr7	TogoVar
WIPI2_chr7_5185233_5238840	5186705	AAAAAAAA others(15): Show AAAAAAAAAATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 NA19007.hp2 NA20300.hp2 HG02615.hp2 NA19007.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0174 a0001c0001t0003g0016 a0001c0001t0003g0078 a0001c0001t0001g0174 a0001c0001t0003g0016 a0001c0001t0003g0078	3	392	0.0077	-22	c.-37 others(33): Show c.-3714_-3693delAAAAAAAAATATATATATATAT	WIPI2	ENSG00000157954.15	transcript	ENST00000288828.9	protein_coding		3527		chr7	TogoVar
WIPI2_chr7_5185233_5238840	5186707	AAAAAAAA others(15): Show AAAAAAAATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp1 NA19240.hp1 HG02965.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0016 a0001c0001t0003g0086 a0001c0001t0003g0016 a0001c0001t0003g0086	2	392	0.0051	-22	c.-37 others(33): Show c.-3712_-3691delAAAAAAATATATATATATATAT	WIPI2	ENSG00000157954.15	transcript	ENST00000288828.9	protein_coding		3525		chr7	TogoVar
WNT10B_chr12_48960340_48976735	48971849	GCGCGCGC others(15): Show GCGCGCGCGCGCGCGCACACACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03492.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	382	0.0026	-22	c.-45 others(31): Show c.-457_-436delTGTGTGTGCGCGCGCGCGCGCG	WNT10B	ENSG00000169884.14	transcript	ENST00000301061.9	protein_coding		115		chr12	TogoVar
WNT10B_chr12_48960340_48976735	48971857	GCGCGCGC others(15): Show GCGCGCGCACACACACACACACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG01081.hp1 others(6): Show HG00423.hp1 HG00438.hp1 HG01081.hp1 HG01361.hp2 HG02004.hp2 NA18950.hp1 NA18956.hp2 NA18977.hp1 NA19091.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0002 a0001c0002t0002g0002	9	382	0.0236	-22	c.-46 others(31): Show c.-465_-444delTGTGTGTGTGTGTGTGCGCGCG	WNT10B	ENSG00000169884.14	transcript	ENST00000301061.9	protein_coding		123		chr12	TogoVar
WNT3A_chr1_228001998_228066271	228055179	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	382	0.0026	-22	c.580 others(39): Show c.580-3787_580-3766delTATATATATATATATATATATA	WNT3A	ENSG00000154342.6	transcript	ENST00000284523.2	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
WNT5A_chr3_55460715_55492306	55484685	TACACACA others(15): Show TACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02818.hp2 HG02572.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0051 a0001c0001t0012g0051	2	366	0.0055	-22	c.6+2 others(35): Show c.6+2273_6+2294delGTGTGTGTGTGTGTGTGTGTGT	WNT5A	ENSG00000114251.15	transcript	ENST00000264634.9	protein_coding	1/4			chr3	TogoVar
WNT6_chr2_218854805_218879233	218875159	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp2 HG01978.hp2 HG02004.hp2 others(2): Show HG01496.hp2 HG01978.hp2 HG02004.hp2 HG03942.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0022 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0022 a0001c0001t0001g0049 a0001c0001t0002g0045	5	358	0.0140	-22	c.13 others(33): Show c.1315_*1336delTTTTTTTTTTTTTTTTTTTTTT	WNT6	ENSG00000115596.4	transcript	ENST00000233948.4	protein_coding		927		chr2	TogoVar

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Search Results (Total: 9631 hits)