Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CDH23_chr10_71391920_71820947	71792834	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03098.hp2 HG02965.hp2 HG03098.hp2	a0010 a0059 a0010 a0059	a0010c0146 a0059c0157 a0010c0146 a0059c0157	a0010c0146t0009 a0059c0157t0029 a0010c0146t0009 a0059c0157t0029	a0010c0146t0009g0042 a0059c0157t0029g0182 a0010c0146t0009g0042 a0059c0157t0029g0182	2	196	0.0102	-22	c.625 others(39): Show c.6254-346_6254-325delAAAAAAAAAAAAAAAAAATATA	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	47/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71792836	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00741.hp1 HG01123.hp1 others(9): Show HG00735.hp1 HG00741.hp1 HG01123.hp1 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG02015.hp1 HG02280.hp1 HG02738.hp1 HG03041.hp2 HG03209.hp1 HG03669.hp1	a0003 a0010 a0020 others(5): Show a0003 a0010 a0020 a0032 a0040 a0063 a0074 a0106	a0003c0002 a0003c0089 a0003c0090 others(8): Show a0003c0002 a0003c0089 a0003c0090 a0003c0100 a0010c0019 a0020c0159 a0032c0120 a0040c0139 a0063c0112 a0074c0049 a0106c0132	a0003c0002t0001 a0003c0089t0002 a0003c0090t0001 others(8): Show a0003c0002t0001 a0003c0089t0002 a0003c0090t0001 a0003c0100t0001 a0010c0019t0009 a0020c0159t0019 a0032c0120t0002 a0040c0139t0008 a0063c0112t0002 a0074c0049t0001 a0106c0132t0001	a0003c0002t0001g0105 a0003c0089t0002g0047 a0003c0090t0001g0194 others(9): Show a0003c0002t0001g0105 a0003c0089t0002g0047 a0003c0090t0001g0194 a0003c0100t0001g0152 a0010c0019t0009g0025 a0010c0019t0009g0026 a0020c0159t0019g0039 a0032c0120t0002g0076 a0040c0139t0008g0009 a0063c0112t0002g0102 a0074c0049t0001g0081 a0106c0132t0001g0144	12	196	0.0612	-22	c.625 others(39): Show c.6254-344_6254-323delAAAAAAAAAAAAAAAATATATA	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	47/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71792838	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00597.hp1 HG00741.hp2 others(12): Show HG00140.hp1 HG00597.hp1 HG00741.hp2 HG01070.hp2 HG01358.hp2 HG02602.hp2 HG02965.hp1 HG04204.hp2 NA18945.hp2 NA18953.hp2 NA18963.hp1 NA18974.hp1 NA18977.hp1 NA18981.hp2 NA19077.hp1	a0003 a0020 a0028 others(7): Show a0003 a0020 a0028 a0032 a0053 a0062 a0066 a0078 a0095 a0096	a0003c0002 a0003c0012 a0003c0128 others(9): Show a0003c0002 a0003c0012 a0003c0128 a0020c0136 a0028c0016 a0032c0061 a0053c0153 a0062c0107 a0066c0034 a0078c0092 a0095c0085 a0096c0077	a0003c0002t0001 a0003c0002t0002 a0003c0012t0001 others(11): Show a0003c0002t0001 a0003c0002t0002 a0003c0012t0001 a0003c0012t0002 a0003c0128t0001 a0020c0136t0001 a0028c0016t0012 a0032c0061t0001 a0053c0153t0008 a0062c0107t0001 a0066c0034t0001 a0078c0092t0010 a0095c0085t0001 a0096c0077t0002	a0003c0002t0001g0132 a0003c0002t0002g0048 a0003c0012t0001g0110 others(12): Show a0003c0002t0001g0132 a0003c0002t0002g0048 a0003c0012t0001g0110 a0003c0012t0002g0077 a0003c0128t0001g0121 a0020c0136t0001g0113 a0028c0016t0012g0014 a0028c0016t0012g0015 a0032c0061t0001g0108 a0053c0153t0008g0021 a0062c0107t0001g0080 a0066c0034t0001g0158 a0078c0092t0010g0008 a0095c0085t0001g0168 a0096c0077t0002g0049	15	196	0.0765	-22	c.625 others(39): Show c.6254-342_6254-321delAAAAAAAAAAAAAATATATATA	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	47/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH26_chr20_59953423_60019529	59953922	CTATATAT others(15): Show CTATATATATATATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp1 NA18522.hp1 NA18966.hp1 others(4): Show HG02004.hp1 NA18522.hp1 NA18966.hp1 NA18966.hp2 NA18982.hp2 NA19067.hp1 NA19087.hp2	a0001 a0005 a0008 a0001 a0005 a0008	a0001c0001 a0005c0007 a0008c0010 a0001c0001 a0005c0007 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0005c0007t0006 a0008c0010t0002	a0001c0001t0001g0142 a0001c0001t0001g0158 a0001c0001t0001g0220 others(4): Show a0001c0001t0001g0142 a0001c0001t0001g0158 a0001c0001t0001g0220 a0001c0001t0002g0206 a0001c0001t0003g0161 a0005c0007t0006g0006 a0008c0010t0002g0129	7	288	0.0243	-22	c.-48 others(33): Show c.-4804_-4783delTATATATATATATATATATATA	CDH26	ENSG00000124215.17	transcript	ENST00000348616.9	protein_coding		4500		chr20	TogoVar
CDH26_chr20_59953423_60019529	59953961	TATATATA others(15): Show TATATATATATATATATATATAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0192 a0001c0001t0003g0192	1	288	0.0035	-22	c.-47 others(33): Show c.-4765_-4744delATATATATATATATATATATAG	CDH26	ENSG00000124215.17	transcript	ENST00000348616.9	protein_coding		4461		chr20	TogoVar
CDH26_chr20_59953423_60019529	59953967	TATATATA others(15): Show TATATATATATATATAGAGAGAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0148 a0001c0001t0002g0148	1	288	0.0035	-22	c.-47 others(33): Show c.-4759_-4738delATATATATATATATAGAGAGAG	CDH26	ENSG00000124215.17	transcript	ENST00000348616.9	protein_coding		4455		chr20	TogoVar
CDH26_chr20_59953423_60019529	59953973	TATATATA others(15): Show TATATATATAGAGAGAGAGAGAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02083.hp2 HG04115.hp1 NA18522.hp2 HG02083.hp2 HG04115.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0005 a0001c0001t0001 a0001c0001t0002 a0001c0002t0005	a0001c0001t0001g0265 a0001c0001t0002g0086 a0001c0002t0005g0117 a0001c0001t0001g0265 a0001c0001t0002g0086 a0001c0002t0005g0117	3	288	0.0104	-22	c.-47 others(33): Show c.-4753_-4732delATATATATAGAGAGAGAGAGAG	CDH26	ENSG00000124215.17	transcript	ENST00000348616.9	protein_coding		4449		chr20	TogoVar
CDH2_chr18_27945966_28182130	28038422	AGTGTGTG others(15): Show AGTGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01081.hp1 HG01978.hp1 others(23): Show HG00423.hp2 HG01081.hp1 HG01978.hp1 HG02027.hp1 HG02280.hp2 HG02886.hp1 HG03834.hp1 NA18947.hp2 NA18951.hp2 NA18954.hp1 NA18955.hp1 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18990.hp1 NA18993.hp2 NA18999.hp2 NA19000.hp2 NA19030.hp2 NA19043.hp2 NA19056.hp2 NA19057.hp1 NA19072.hp2 NA19079.hp1 NA19085.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0013	a0001c0001t0004 a0001c0002t0029 a0002c0003t0001 others(10): Show a0001c0001t0004 a0001c0002t0029 a0002c0003t0001 a0002c0003t0003 a0002c0003t0004 a0002c0003t0007 a0002c0003t0009 a0002c0003t0010 a0002c0003t0011 a0002c0003t0015 a0002c0003t0027 a0002c0003t0032 a0002c0013t0002	a0001c0001t0004g0030 a0001c0001t0004g0031 a0001c0002t0029g0004 others(23): Show a0001c0001t0004g0030 a0001c0001t0004g0031 a0001c0002t0029g0004 a0002c0003t0001g0091 a0002c0003t0001g0108 a0002c0003t0001g0139 a0002c0003t0003g0153 a0002c0003t0003g0224 a0002c0003t0004g0033 a0002c0003t0007g0145 a0002c0003t0007g0164 a0002c0003t0009g0246 a0002c0003t0009g0253 a0002c0003t0009g0254 a0002c0003t0009g0255 a0002c0003t0009g0256 a0002c0003t0009g0258 a0002c0003t0010g0238 a0002c0003t0010g0243 a0002c0003t0010g0259 a0002c0003t0011g0056 a0002c0003t0015g0264 a0002c0003t0015g0267 a0002c0003t0027g0257 a0002c0003t0032g0042 a0002c0013t0002g0230	26	268	0.0970	-22	c.173 others(41): Show c.173-24535_173-24514delACACACACACACACACACACAC	CDH2	ENSG00000170558.10	transcript	ENST00000269141.8	protein_coding	2/15			chr18	TogoVar
CDH2_chr18_27945966_28182130	28043473	TATATATA others(15): Show TATATATATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02145.hp1 HG02970.hp2 others(1): Show HG01884.hp1 HG02145.hp1 HG02970.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0001t0012 a0001c0002t0007 others(1): Show a0001c0001t0007 a0001c0001t0012 a0001c0002t0007 a0001c0002t0034	a0001c0001t0007g0075 a0001c0001t0012g0058 a0001c0002t0007g0211 others(1): Show a0001c0001t0007g0075 a0001c0001t0012g0058 a0001c0002t0007g0211 a0001c0002t0034g0049	4	268	0.0149	-22	c.173 others(41): Show c.173-29586_173-29565delTTATATATATATATATATATAT	CDH2	ENSG00000170558.10	transcript	ENST00000269141.8	protein_coding	2/15			chr18	TogoVar
CDH4_chr20_61247261_61945617	61272883	AGAGTACC others(15): Show AGAGTACCGTGTGCAGTTTGGGG	A A	intron_variant intron_variant	MODIFIER	HG02559.hp1 NA18906.hp1 HG02559.hp1 NA18906.hp1	a0001 a0001	a0001c0010 a0001c0012 a0001c0010 a0001c0012	a0001c0010t0009 a0001c0012t0001 a0001c0010t0009 a0001c0012t0001	a0001c0010t0009g0045 a0001c0012t0001g0008 a0001c0010t0009g0045 a0001c0012t0001g0008	2	106	0.0189	-22	c.169 others(41): Show c.169+17996_169+18017delCCGTGTGCAGTTTGGGGGAGTA	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61296258	TGTGCGTG others(15): Show TGTGCGTGTGTGTGTGTGCGTGG	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00738.hp2 HG03453.hp1 others(3): Show HG00408.hp1 HG00738.hp2 HG03453.hp1 HG03579.hp2 HG04204.hp2 NA18952.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0001c0010 a0001c0013 others(2): Show a0001c0003 a0001c0010 a0001c0013 a0002c0009 a0002c0015	a0001c0003t0002 a0001c0010t0001 a0001c0013t0006 others(3): Show a0001c0003t0002 a0001c0010t0001 a0001c0013t0006 a0002c0009t0034 a0002c0009t0035 a0002c0015t0007	a0001c0003t0002g0002 a0001c0010t0001g0027 a0001c0013t0006g0036 others(3): Show a0001c0003t0002g0002 a0001c0010t0001g0027 a0001c0013t0006g0036 a0002c0009t0034g0009 a0002c0009t0035g0026 a0002c0015t0007g0025	6	106	0.0566	-22	c.169 others(41): Show c.169+41357_169+41378delTGTGCGTGGGTGCGTGTGTGTG	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61383746	GATATATG others(15): Show GATATATGCATATATATGAAGAT	G G	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0009 a0001c0010t0009	a0001c0010t0009g0045 a0001c0010t0009g0045	1	106	0.0094	-22	c.169 others(43): Show c.169+128862_169+128883delATATATATGAAGATATATATGC	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61550171	ACTGGCCT others(15): Show ACTGGCCTCCCTAGCCTGCTTCC	A A	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0002 a0002	a0002c0016 a0002c0016	a0002c0016t0004 a0002c0016t0004	a0002c0016t0004g0042 a0002c0016t0004g0042	1	106	0.0094	-22	c.170 others(43): Show c.170-193374_170-193353delCTTCCCTGGCCTCCCTAGCCTG	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61692092	TATGTGTG others(15): Show TATGTGTGTGTCTGTGTGTATGC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 NA18906.hp2 HG02109.hp2 NA18906.hp2	a0002 a0002	a0002c0002 a0002c0008 a0002c0002 a0002c0008	a0002c0002t0005 a0002c0008t0004 a0002c0002t0005 a0002c0008t0004	a0002c0002t0005g0096 a0002c0008t0004g0041 a0002c0002t0005g0096 a0002c0008t0004g0041	2	106	0.0189	-22	c.170 others(41): Show c.170-51452_170-51431delATGCATGTGTGTGTCTGTGTGT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61755438	ACACACAC others(15): Show ACACACACACACCCCGTACACAC	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01255.hp1 HG02451.hp2 others(4): Show HG01243.hp1 HG01255.hp1 HG02451.hp2 HG02922.hp2 HG03139.hp2 HG03540.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0006 others(1): Show a0001c0001 a0001c0003 a0001c0006 a0002c0004	a0001c0001t0001 a0001c0003t0001 a0001c0003t0005 others(4): Show a0001c0001t0001 a0001c0003t0001 a0001c0003t0005 a0001c0003t0017 a0001c0003t0054 a0001c0006t0029 a0002c0004t0003	a0001c0001t0001g0032 a0001c0003t0001g0020 a0001c0003t0005g0054 others(4): Show a0001c0001t0001g0032 a0001c0003t0001g0020 a0001c0003t0005g0054 a0001c0003t0017g0067 a0001c0003t0054g0086 a0001c0006t0029g0035 a0002c0004t0003g0011	7	106	0.0660	-22	c.396 others(41): Show c.396+11662_396+11683delCCGTACACACCACACACACACC	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61945595	GCCCCGTG others(15): Show GCCCCGTGGCTGCCCCTTCTCAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp2 HG02922.hp1 HG03209.hp1 HG01255.hp2 HG02922.hp1 HG03209.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0010 a0001c0007t0046 a0001c0007t0010 a0001c0007t0046	a0001c0007t0010g0018 a0001c0007t0010g0044 a0001c0007t0046g0066 a0001c0007t0010g0018 a0001c0007t0010g0044 a0001c0007t0046g0066	3	106	0.0283	-22	c.86 others(33): Show c.8653_*8674delCCCCGTGGCTGCCCCTTCTCAC	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding		4979		chr20	TogoVar
CDH6_chr5_31188686_31334146	31199423	TACACACA others(15): Show TACACACATATGTGTATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00642.hp1 HG00733.hp2 others(89): Show HG00099.hp2 HG00642.hp1 HG00733.hp2 HG00735.hp1 HG01074.hp1 HG01099.hp1 HG01109.hp1 HG01192.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01517.hp2 HG01891.hp1 HG01891.hp2 HG01952.hp2 HG02027.hp1 HG02056.hp2 HG02109.hp2 HG02129.hp1 HG02145.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02559.hp2 HG02602.hp2 HG02622.hp1 HG02630.hp1 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03239.hp2 HG03471.hp2 HG03486.hp2 HG03540.hp2 HG03579.hp1 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp1 HG04184.hp1 HG04199.hp2 HG06807.hp2 NA18747.hp1 NA18906.hp1 NA18944.hp1 NA18948.hp1 NA18950.hp1 NA18956.hp1 NA18962.hp2 NA18969.hp1 NA18971.hp1 NA18977.hp1 NA18988.hp1 NA18992.hp1 NA18993.hp1 NA18994.hp2 NA19004.hp1 NA19005.hp2 NA19010.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19055.hp2 NA19057.hp2 NA19063.hp2 NA19072.hp2 NA19076.hp2 NA19081.hp2 NA19085.hp2 NA19086.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0010 a0001c0017 a0002c0007	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(54): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0021 a0001c0001t0023 a0001c0001t0026 a0001c0001t0031 a0001c0001t0037 a0001c0001t0038 a0001c0001t0068 a0001c0001t0070 a0001c0001t0071 a0001c0001t0076 a0001c0001t0082 a0001c0001t0084 a0001c0001t0093 a0001c0001t0096 a0001c0001t0097 a0001c0001t0099 a0001c0001t0106 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0008 a0001c0002t0018 a0001c0002t0019 a0001c0002t0025 a0001c0002t0042 a0001c0002t0044 a0001c0002t0046 a0001c0002t0051 a0001c0002t0059 a0001c0002t0107 a0001c0003t0004 a0001c0003t0013 a0001c0003t0029 a0001c0003t0086 a0001c0003t0101 a0001c0005t0024 a0001c0005t0036 a0001c0005t0061 a0001c0006t0064 a0001c0006t0072 a0001c0006t0081 a0001c0008t0034 a0001c0008t0103 a0001c0008t0104 a0001c0009t0002 a0001c0010t0002 a0001c0017t0002 a0002c0007t0001 a0002c0007t0102	a0001c0001t0002g0036 a0001c0001t0002g0095 a0001c0001t0002g0099 others(89): Show a0001c0001t0002g0036 a0001c0001t0002g0095 a0001c0001t0002g0099 a0001c0001t0002g0112 a0001c0001t0002g0116 a0001c0001t0002g0120 a0001c0001t0004g0002 a0001c0001t0004g0128 a0001c0001t0004g0139 a0001c0001t0004g0222 a0001c0001t0004g0328 a0001c0001t0004g0334 a0001c0001t0006g0088 a0001c0001t0006g0089 a0001c0001t0006g0090 a0001c0001t0006g0131 a0001c0001t0010g0037 a0001c0001t0010g0096 a0001c0001t0011g0002 a0001c0001t0011g0327 a0001c0001t0012g0008 a0001c0001t0012g0031 a0001c0001t0012g0319 a0001c0001t0015g0324 a0001c0001t0021g0103 a0001c0001t0023g0134 a0001c0001t0023g0237 a0001c0001t0026g0329 a0001c0001t0031g0124 a0001c0001t0037g0084 a0001c0001t0038g0086 a0001c0001t0068g0330 a0001c0001t0070g0336 a0001c0001t0071g0092 a0001c0001t0076g0121 a0001c0001t0082g0122 a0001c0001t0084g0097 a0001c0001t0093g0326 a0001c0001t0096g0127 a0001c0001t0097g0133 a0001c0001t0099g0101 a0001c0001t0106g0325 a0001c0002t0001g0035 a0001c0002t0001g0100 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0110 a0001c0002t0001g0111 a0001c0002t0001g0113 a0001c0002t0001g0119 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0001g0323 a0001c0002t0002g0104 a0001c0002t0002g0130 a0001c0002t0003g0098 a0001c0002t0003g0321 a0001c0002t0005g0109 a0001c0002t0008g0105 a0001c0002t0008g0118 a0001c0002t0018g0320 a0001c0002t0019g0322 a0001c0002t0025g0114 a0001c0002t0025g0115 a0001c0002t0042g0108 a0001c0002t0044g0094 a0001c0002t0046g0093 a0001c0002t0051g0087 a0001c0002t0059g0117 a0001c0002t0107g0091 a0001c0003t0004g0223 a0001c0003t0013g0311 a0001c0003t0029g0137 a0001c0003t0086g0030 a0001c0003t0101g0138 a0001c0005t0024g0085 a0001c0005t0036g0032 a0001c0005t0061g0083 a0001c0006t0064g0221 a0001c0006t0072g0123 a0001c0006t0081g0306 a0001c0008t0034g0132 a0001c0008t0103g0135 a0001c0008t0104g0136 a0001c0009t0002g0129 a0001c0010t0002g0081 a0001c0010t0002g0082 a0001c0017t0002g0102 a0002c0007t0001g0078 a0002c0007t0001g0079 a0002c0007t0001g0080 a0002c0007t0102g0077	92	338	0.2722	-22	c.-12 others(41): Show c.-129+5580_-129+5601delACACACACATATGTGTATATAT	CDH6	ENSG00000113361.13	transcript	ENST00000265071.3	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CDH6_chr5_31188686_31334146	31292830	TATATATA others(15): Show TATATATATATATATATGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02027.hp2 HG02647.hp1 others(6): Show HG01074.hp2 HG02027.hp2 HG02647.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp1 HG03579.hp2 HG03831.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0010 a0001c0001 a0001c0003 a0001c0010	a0001c0001t0010 a0001c0001t0014 a0001c0001t0067 others(5): Show a0001c0001t0010 a0001c0001t0014 a0001c0001t0067 a0001c0001t0071 a0001c0001t0089 a0001c0001t0092 a0001c0003t0085 a0001c0010t0002	a0001c0001t0010g0199 a0001c0001t0014g0210 a0001c0001t0014g0211 others(6): Show a0001c0001t0010g0199 a0001c0001t0014g0210 a0001c0001t0014g0211 a0001c0001t0067g0200 a0001c0001t0071g0092 a0001c0001t0089g0264 a0001c0001t0092g0248 a0001c0003t0085g0213 a0001c0010t0002g0082	9	338	0.0266	-22	c.229 others(39): Show c.229-1115_229-1094delGTGTGCATATATATATATATAT	CDH6	ENSG00000113361.13	transcript	ENST00000265071.3	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CDH6_chr5_31188686_31334146	31302788	GAGAGAGA others(15): Show GAGAGAGAGAGAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0214 a0001c0001t0004g0214	1	338	0.0030	-22	c.999 others(37): Show c.999+494_999+515delGAGAGAGAGAAAGAAAGAAAGA	CDH6	ENSG00000113361.13	transcript	ENST00000265071.3	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CDH7_chr18_65746012_65895337	65781842	CTTTCTTT others(15): Show CTTTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0037 a0002c0002t0037	a0002c0002t0037g0084 a0002c0002t0037g0084	1	208	0.0048	-22	c.210 others(41): Show c.210+18792_210+18813delTTCTTTCTTTCTTTCTTTCTTT	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH8_chr16_61642250_62041438	61822205	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03579.hp1 HG06807.hp2 HG02486.hp1 HG03579.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0027 a0001c0001t0034 a0001c0001t0019 a0001c0001t0027 a0001c0001t0034	a0001c0001t0019g0075 a0001c0001t0027g0009 a0001c0001t0034g0011 a0001c0001t0019g0075 a0001c0001t0027g0009 a0001c0001t0034g0011	3	168	0.0179	-22	c.836 others(39): Show c.836-1114_836-1093delAAAAAAAAAAAAAAAAAAAAAA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	5/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960294	CGTGTGTG others(15): Show CGTGTGTGTGTATACACACATAT	C C	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0052 a0001c0001t0052	a0001c0001t0052g0121 a0001c0001t0052g0121	1	168	0.0060	-22	c.253 others(41): Show c.253-58843_253-58822delATATGTGTGTATACACACACAC	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH9_chr5_26875597_27043586	26883041	TTATATAT others(15): Show TTATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	240	0.0042	-22	c.188 others(41): Show c.1883-1440_1883-1419delTATATATATATATATATATATA	CDH9	ENSG00000113100.10	transcript	ENST00000231021.9	protein_coding	11/11			chr5	TogoVar
CDHR2_chr5_176544342_176600824	176580148	ACACACAC others(15): Show ACACACACACTCACACACGCACT	A A	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03453.hp1 NA19030.hp1 others(2): Show HG03139.hp2 HG03453.hp1 NA19030.hp1 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0013 a0001c0005t0001g0046 a0001c0005t0001g0173 others(1): Show a0001c0005t0001g0013 a0001c0005t0001g0046 a0001c0005t0001g0173 a0001c0005t0001g0296	5	344	0.0145	-22	c.181 others(41): Show c.1819-1168_1819-1147delCACACTCACACACGCACTCACA	CDHR2	ENSG00000074276.11	transcript	ENST00000261944.10	protein_coding	16/31		INFO_REALIGN_3_PRIME	chr5	TogoVar
CDHR3_chr7_105958264_106041432	106038159	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 NA18942.hp2 NA19030.hp2 others(2): Show HG00408.hp2 NA18942.hp2 NA19030.hp2 NA19082.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0005 a0001c0004t0001 a0001c0001t0005 a0001c0004t0001	a0001c0001t0005g0003 a0001c0001t0005g0325 a0001c0004t0001g0134 others(2): Show a0001c0001t0005g0003 a0001c0001t0005g0325 a0001c0004t0001g0134 a0001c0004t0001g0199 a0001c0004t0001g0218	5	358	0.0140	-22	c.54 others(33): Show c.5463_*5484delTATATATATATATATATATATA	CDHR3	ENSG00000128536.16	transcript	ENST00000317716.14	protein_coding		1728		chr7	TogoVar
CDHR5_chr11_611583_629955	628933	CTTTCTTT others(15): Show CTTTCTTTCTTTCTTTCTTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00558.hp2 HG00609.hp2 others(52): Show HG00280.hp1 HG00558.hp2 HG00609.hp2 HG00621.hp2 HG01069.hp1 HG01070.hp1 HG01516.hp1 HG01884.hp2 HG02071.hp1 HG02109.hp2 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02738.hp1 HG02886.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03942.hp1 NA18906.hp1 NA18944.hp1 NA18948.hp2 NA18952.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18970.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18999.hp2 NA19007.hp1 NA19007.hp2 NA19012.hp1 NA19055.hp2 NA19074.hp2 NA19080.hp2 NA19085.hp2 NA19088.hp2 NA20752.hp2 NA20805.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0006 a0028 a0031 a0032 a0033	a0001c0001 a0001c0011 a0001c0016 others(11): Show a0001c0001 a0001c0011 a0001c0016 a0001c0021 a0001c0039 a0002c0002 a0002c0047 a0003c0004 a0004c0022 a0006c0008 a0028c0040 a0031c0044 a0032c0026 a0033c0050	a0001c0001t0001 a0001c0011t0001 a0001c0016t0001 others(11): Show a0001c0001t0001 a0001c0011t0001 a0001c0016t0001 a0001c0021t0001 a0001c0039t0001 a0002c0002t0001 a0002c0047t0001 a0003c0004t0002 a0004c0022t0001 a0006c0008t0001 a0028c0040t0001 a0031c0044t0001 a0032c0026t0001 a0033c0050t0001	a0001c0001t0001g0001 a0001c0001t0001g0020 a0001c0001t0001g0023 others(16): Show a0001c0001t0001g0001 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0043 a0001c0001t0001g0123 a0001c0011t0001g0010 a0001c0016t0001g0018 a0001c0021t0001g0074 a0001c0039t0001g0090 a0002c0002t0001g0002 a0002c0047t0001g0066 a0003c0004t0002g0026 a0003c0004t0002g0038 a0004c0022t0001g0100 a0006c0008t0001g0039 a0028c0040t0001g0091 a0031c0044t0001g0096 a0032c0026t0001g0080 a0033c0050t0001g0119	55	409	0.1345	-22	c.-40 others(33): Show c.-4053_-4032delAAGAAAGAAAGAAAGAAAGAAA	CDHR5	ENSG00000099834.19	transcript	ENST00000397542.7	protein_coding		3979		chr11	TogoVar
CDIN1_chr15_36574626_36815244	36686929	AAGGAAGG others(15): Show AAGGAAGGAAGGAAGGAAAAGAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG06807.hp2 HG02451.hp2 HG06807.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0011 a0002c0002t0003 a0002c0002t0011	a0002c0002t0003g0071 a0002c0002t0011g0072 a0002c0002t0003g0071 a0002c0002t0011g0072	2	238	0.0084	-22	c.347 others(39): Show c.347-4742_347-4721delGGAAAAGATAGGAAGGAAGGAA	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDIN1_chr15_36574626_36815244	36703366	TCTATCAT others(15): Show TCTATCATATATATATATATCAG	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02486.hp1 HG02622.hp2 others(1): Show HG01255.hp1 HG02486.hp1 HG02622.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0001t0024	a0001c0001t0002g0008 a0001c0001t0007g0092 a0001c0001t0008g0131 others(1): Show a0001c0001t0002g0008 a0001c0001t0007g0092 a0001c0001t0008g0131 a0001c0001t0024g0064	4	238	0.0168	-22	c.545 others(39): Show c.545-5856_545-5835delCTATCATATATATATATATCAG	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	8/10			chr15	TogoVar
CDK11A_chr1_1697379_1729357	1716814	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0007 a0007	a0007c0024 a0007c0024	a0007c0024t0003 a0007c0024t0003	a0007c0024t0003g0149 a0007c0024t0003g0149	1	372	0.0027	-22	c.356 others(37): Show c.356-358_356-337delTTTTTTTTTTTTTTTTTTTTTT	CDK11A	ENSG00000008128.23	transcript	ENST00000404249.8	protein_coding	4/19			chr1	TogoVar
CDK12_chr17_39456486_39539544	39466615	GAAAAAAA others(15): Show GAAAAAAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01257.hp1 others(11): Show HG01070.hp1 HG01071.hp2 HG01257.hp1 HG02129.hp2 HG02132.hp1 HG02486.hp1 HG02976.hp1 HG03041.hp2 HG03453.hp1 NA18959.hp2 NA18975.hp2 NA18984.hp1 NA19007.hp1 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0009 a0001c0001t0010 others(6): Show a0001c0001t0002 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0032 a0001c0001t0040 a0001c0001t0052	a0001c0001t0002g0019 a0001c0001t0009g0108 a0001c0001t0010g0091 others(11): Show a0001c0001t0002g0019 a0001c0001t0009g0108 a0001c0001t0010g0091 a0001c0001t0010g0106 a0001c0001t0010g0107 a0001c0001t0011g0103 a0001c0001t0011g0104 a0001c0001t0011g0105 a0001c0001t0012g0115 a0001c0001t0013g0110 a0001c0001t0013g0112 a0001c0001t0032g0113 a0001c0001t0040g0114 a0001c0001t0052g0111	14	260	0.0539	-22	c.104 others(41): Show c.1046+3517_1046+3538delAAAAAAAAAAAAAAAAAAAAAA	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
CDK12_chr17_39456486_39539544	39481625	GCTCGCGC others(15): Show GCTCGCGCGCTCTCTCTCTCTCT	G G	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0076 a0001c0001t0002g0076	1	260	0.0039	-22	c.193 others(41): Show c.1932-8928_1932-8907delGCGCGCTCTCTCTCTCTCTCTC	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
CDK12_chr17_39456486_39539544	39481633	GCTCTCTC others(15): Show GCTCTCTCTCTCTCTCTCTCTCT	G G	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0056	a0001c0001t0056g0067 a0001c0001t0056g0067	1	260	0.0039	-22	c.193 others(41): Show c.1932-8867_1932-8846delCTCTCTCTCTCTCTCTCTCTCT	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
CDK13_chr7_39945256_40104580	40003186	ACACACAC others(15): Show ACACACACACACACACACACACT	A A	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG03688.hp2 HG02056.hp1 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0026 a0001c0001t0001 a0001c0001t0026	a0001c0001t0001g0314 a0001c0001t0026g0313 a0001c0001t0001g0314 a0001c0001t0026g0313	2	322	0.0062	-22	c.235 others(41): Show c.2353+1157_2353+1178delACACACACACACACACACACTC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	90750153	AACACACA others(15): Show AACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0149 a0001c0001t0035g0149	1	168	0.0060	-22	c.464 others(39): Show c.464+2405_464+2426delACACACACACACACACACACAC	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	91027825	TCCTCTCC others(15): Show TCCTCTCCCCTCCCCTCCCCTCC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0034 a0001c0001t0016g0034	1	168	0.0060	-22	c.104 others(43): Show c.1042-18045_1042-18024delTCCCCTCCCCTCCCCTCCCCTC	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	10/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK17_chr12_96273261_96405439	96277805	ATATATAT others(15): Show ATATATATATATATATATATATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01070.hp1 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0121 a0001c0001t0001g0125	2	346	0.0058	-22	c.24 others(33): Show c.2415_*2436delCATATATATATATATATATATA	CDK17	ENSG00000059758.8	transcript	ENST00000261211.8	protein_coding		455		chr12	TogoVar
CDK6_chr7_92599921_92841573	92725004	GCAGCTGA others(15): Show GCAGCTGAATGGCAAAAAGAAAC	G G	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0072 a0001c0001t0007g0072	1	124	0.0081	-22	c.537 others(37): Show c.537+600_537+621delGTTTCTTTTTGCCATTCAGCTG	CDK6	ENSG00000105810.10	transcript	ENST00000424848.3	protein_coding	4/7			chr7	TogoVar
CDK8_chr13_26249129_26410238	26268256	AACACACA others(15): Show AACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG06807.hp1 HG01255.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0188 a0001c0001t0001g0189	2	328	0.0061	-22	c.128 others(41): Show c.128+13519_128+13540delCACACACACACACACACACACA	CDK8	ENSG00000132964.13	transcript	ENST00000381527.8	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr13	TogoVar
CDKAL1_chr6_20529457_21237404	20613249	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0008 a0001c0002t0003g0008	1	196	0.0051	-22	c.287 others(41): Show c.287-36022_287-36001delTTTTTTTTTTTTTTTTTTTTTT	CDKAL1	ENSG00000145996.11	transcript	ENST00000274695.8	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr6	TogoVar
CDKAL1_chr6_20529457_21237404	20748554	GGAAAAAA others(15): Show GGAAAAAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00544.hp2 HG00621.hp2 others(33): Show HG00140.hp1 HG00544.hp2 HG00621.hp2 HG01109.hp2 HG01361.hp2 HG01943.hp2 HG01978.hp2 HG02027.hp1 HG02056.hp1 HG02132.hp2 HG02273.hp2 HG02300.hp2 HG02615.hp2 HG02647.hp1 HG03139.hp2 HG03490.hp2 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp2 NA18948.hp2 NA18950.hp1 NA18953.hp1 NA18966.hp2 NA18983.hp2 NA18992.hp1 NA18994.hp2 NA19002.hp1 NA19007.hp1 NA19010.hp1 NA19082.hp1 NA19091.hp2 NA20300.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0004 others(6): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0008 a0001c0010 a0002c0003 a0002c0007 a0005c0014	a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 others(21): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0023 a0001c0001t0025 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0012 a0001c0002t0013 a0001c0002t0016 a0001c0002t0044 a0001c0004t0018 a0001c0006t0009 a0001c0008t0011 a0001c0010t0007 a0002c0003t0002 a0002c0003t0005 a0002c0003t0013 a0002c0007t0002 a0002c0007t0005 a0002c0007t0038 a0005c0014t0008	a0001c0001t0003g0113 a0001c0001t0007g0043 a0001c0001t0009g0138 others(33): Show a0001c0001t0003g0113 a0001c0001t0007g0043 a0001c0001t0009g0138 a0001c0001t0010g0035 a0001c0001t0010g0109 a0001c0001t0023g0115 a0001c0001t0025g0060 a0001c0002t0001g0148 a0001c0002t0002g0041 a0001c0002t0002g0046 a0001c0002t0002g0047 a0001c0002t0003g0032 a0001c0002t0003g0073 a0001c0002t0003g0114 a0001c0002t0012g0039 a0001c0002t0013g0034 a0001c0002t0016g0045 a0001c0002t0044g0038 a0001c0004t0018g0017 a0001c0006t0009g0078 a0001c0008t0011g0068 a0001c0008t0011g0069 a0001c0010t0007g0044 a0002c0003t0002g0013 a0002c0003t0002g0056 a0002c0003t0002g0057 a0002c0003t0005g0036 a0002c0003t0005g0053 a0002c0003t0005g0080 a0002c0003t0005g0081 a0002c0003t0013g0037 a0002c0007t0002g0048 a0002c0007t0005g0061 a0002c0007t0005g0062 a0002c0007t0038g0173 a0005c0014t0008g0119	36	196	0.1837	-22	c.468 others(39): Show c.468+8940_468+8961delGAAAAAAAAAAAAAAAAAAAAA	CDKAL1	ENSG00000145996.11	transcript	ENST00000274695.8	protein_coding	6/15			chr6	TogoVar
CDKAL1_chr6_20529457_21237404	20748555	GAAAAAAA others(15): Show GAAAAAAAAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp1 HG01257.hp2 HG01258.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0144 a0002c0003t0002g0157 a0002c0003t0002g0144 a0002c0003t0002g0157	2	196	0.0102	-22	c.468 others(39): Show c.468+8959_468+8980delAAAAAAAAAAAAAAAAAAAAAA	CDKAL1	ENSG00000145996.11	transcript	ENST00000274695.8	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr6	TogoVar
CDKAL1_chr6_20529457_21237404	20810392	TCACACAC others(15): Show TCACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02109.hp1 HG02109.hp2 others(4): Show HG01192.hp1 HG02109.hp1 HG02109.hp2 HG02965.hp2 HG03130.hp2 HG03516.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0018 a0001c0002t0003 a0001c0002t0011 a0001c0005t0006	a0001c0001t0001g0007 a0001c0001t0003g0082 a0001c0001t0005g0137 others(4): Show a0001c0001t0001g0007 a0001c0001t0003g0082 a0001c0001t0005g0137 a0001c0001t0018g0005 a0001c0002t0003g0020 a0001c0002t0011g0131 a0001c0005t0006g0085	7	196	0.0357	-22	c.638 others(41): Show c.638+29159_638+29180delACACACACACACACACACACAC	CDKAL1	ENSG00000145996.11	transcript	ENST00000274695.8	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr6	TogoVar
CDKAL1_chr6_20529457_21237404	21091857	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00544.hp2 others(46): Show HG00099.hp2 HG00140.hp2 HG00544.hp2 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01256.hp1 HG01258.hp2 HG01358.hp2 HG01361.hp1 HG01496.hp2 HG01516.hp1 HG01943.hp1 HG02055.hp1 HG02056.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02300.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG02897.hp1 HG02922.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03834.hp1 HG06807.hp1 NA18906.hp2 NA18983.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0004 others(5): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0001c0010 a0001c0012 a0004c0016	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0015 a0001c0001t0026 a0001c0001t0031 a0001c0001t0032 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0007 a0001c0002t0009 a0001c0002t0011 a0001c0002t0012 a0001c0002t0028 a0001c0002t0040 a0001c0004t0001 a0001c0004t0004 a0001c0004t0018 a0001c0004t0037 a0001c0005t0001 a0001c0005t0021 a0001c0006t0009 a0001c0010t0002 a0001c0010t0007 a0001c0012t0008 a0004c0016t0001	a0001c0001t0001g0003 a0001c0001t0001g0094 a0001c0001t0001g0096 others(46): Show a0001c0001t0001g0003 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0104 a0001c0001t0001g0188 a0001c0001t0002g0141 a0001c0001t0003g0149 a0001c0001t0003g0162 a0001c0001t0004g0031 a0001c0001t0004g0097 a0001c0001t0005g0189 a0001c0001t0008g0123 a0001c0001t0009g0087 a0001c0001t0009g0089 a0001c0001t0012g0163 a0001c0001t0015g0186 a0001c0001t0015g0191 a0001c0001t0026g0058 a0001c0001t0031g0004 a0001c0001t0032g0196 a0001c0002t0001g0148 a0001c0002t0002g0195 a0001c0002t0003g0032 a0001c0002t0003g0140 a0001c0002t0003g0150 a0001c0002t0003g0184 a0001c0002t0006g0050 a0001c0002t0006g0052 a0001c0002t0006g0110 a0001c0002t0007g0154 a0001c0002t0009g0183 a0001c0002t0011g0131 a0001c0002t0012g0076 a0001c0002t0028g0117 a0001c0002t0040g0125 a0001c0004t0001g0099 a0001c0004t0001g0101 a0001c0004t0001g0127 a0001c0004t0001g0128 a0001c0004t0004g0102 a0001c0004t0018g0017 a0001c0004t0037g0098 a0001c0005t0001g0009 a0001c0005t0021g0026 a0001c0006t0009g0078 a0001c0010t0002g0106 a0001c0010t0007g0044 a0001c0012t0008g0129 a0004c0016t0001g0185	49	196	0.2500	-22	c.123 others(43): Show c.1237-16518_1237-16497delTTTTTTTTTTTTTTTTTTTTTT	CDKAL1	ENSG00000145996.11	transcript	ENST00000274695.8	protein_coding	12/15		INFO_REALIGN_3_PRIME	chr6	TogoVar
CDKL1_chr14_50321265_50401881	50385070	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00639.hp2 others(29): Show HG00280.hp2 HG00323.hp2 HG00639.hp2 HG00735.hp2 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01515.hp2 HG01891.hp1 HG01943.hp2 HG02055.hp1 HG02109.hp2 HG02451.hp2 HG02486.hp1 HG02723.hp1 HG02818.hp1 HG03209.hp2 HG03453.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 NA18522.hp1 NA19043.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006	a0001c0001t0011 a0001c0001t0022 a0001c0001t0043 others(17): Show a0001c0001t0011 a0001c0001t0022 a0001c0001t0043 a0001c0001t0117 a0001c0001t0125 a0001c0001t0129 a0001c0001t0130 a0001c0001t0131 a0001c0001t0132 a0001c0001t0133 a0001c0001t0135 a0001c0001t0136 a0002c0002t0013 a0002c0002t0038 a0002c0002t0039 a0002c0002t0040 a0002c0002t0041 a0002c0002t0134 a0003c0003t0015 a0006c0006t0124	a0001c0001t0011g0271 a0001c0001t0011g0282 a0001c0001t0011g0286 others(29): Show a0001c0001t0011g0271 a0001c0001t0011g0282 a0001c0001t0011g0286 a0001c0001t0011g0294 a0001c0001t0011g0297 a0001c0001t0022g0275 a0001c0001t0022g0289 a0001c0001t0022g0295 a0001c0001t0043g0274 a0001c0001t0117g0207 a0001c0001t0125g0231 a0001c0001t0129g0264 a0001c0001t0130g0269 a0001c0001t0131g0265 a0001c0001t0132g0288 a0001c0001t0133g0292 a0001c0001t0135g0270 a0001c0001t0136g0298 a0002c0002t0013g0268 a0002c0002t0013g0272 a0002c0002t0013g0291 a0002c0002t0038g0287 a0002c0002t0039g0266 a0002c0002t0039g0267 a0002c0002t0040g0273 a0002c0002t0041g0276 a0002c0002t0041g0277 a0002c0002t0134g0296 a0003c0003t0015g0098 a0003c0003t0015g0144 a0003c0003t0015g0151 a0006c0006t0124g0214	32	306	0.1046	-22	c.168 others(41): Show c.168+10609_168+10630delTTTTTTTTTTTTTTTTTTTTTT	CDKL1	ENSG00000100490.10	transcript	ENST00000395834.6	protein_coding	2/9			chr14	TogoVar
CDKL1_chr14_50321265_50401881	50395673	GAAAAAAA others(15): Show GAAAAAAAAGGAAAAGTGAATCA	G G	splice_region_variant others(1): Show splice_region_variant intron_variant	LOW	HG01515.hp1 HG01515.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0025 a0002c0002t0025	a0002c0002t0025g0237 a0002c0002t0025g0237	1	306	0.0033	-22	c.168 others(34): Show c.168+6_168+27delTGATTCACTTTTCCTTTTTTTT	CDKL1	ENSG00000100490.10	transcript	ENST00000395834.6	protein_coding	2/9			chr14	TogoVar
CDKL2_chr4_75571496_75635528	75629938	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02451.hp2 HG02717.hp2 others(2): Show HG01099.hp2 HG02451.hp2 HG02717.hp2 HG03486.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0009 others(2): Show a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0010 a0001c0001t0003g0011	5	306	0.0163	-22	c.-30 others(36): Show c.-30+82_-30+103delTTTTTTTTTTTTTTTTTTTTTT	CDKL2	ENSG00000138769.11	transcript	ENST00000307465.9	protein_coding	1/13			chr4	TogoVar
CDKL3_chr5_134293424_134372171	134326815	GTGTATAT others(15): Show GTGTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01243.hp2 HG01981.hp1 others(1): Show HG00741.hp1 HG01243.hp2 HG01981.hp1 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0045 others(1): Show a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0001g0045 a0001c0001t0001g0047	4	210	0.0191	-22	c.540 others(39): Show c.540-4934_540-4913delTATATATATATATATATATACA	CDKL3	ENSG00000006837.12	transcript	ENST00000265334.9	protein_coding	4/12			chr5	TogoVar
CDKL4_chr2_39170646_39248970	39185219	TATATACA others(15): Show TATATACACATACGTATATATAC	T T	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01243.hp1 HG01891.hp1 others(21): Show HG01099.hp2 HG01243.hp1 HG01891.hp1 HG02055.hp1 HG02145.hp2 HG02486.hp1 HG02615.hp2 HG02622.hp1 HG02809.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03471.hp1 HG03516.hp2 HG03579.hp2 HG04199.hp2 NA19030.hp2 NA19043.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0105 a0001c0001t0001g0187 a0001c0001t0001g0215 others(21): Show a0001c0001t0001g0105 a0001c0001t0001g0187 a0001c0001t0001g0215 a0001c0001t0003g0008 a0001c0001t0003g0021 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0040 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0057 a0001c0001t0003g0059 a0001c0001t0003g0060	24	290	0.0828	-22	c.736 others(37): Show c.736-594_736-573delGTATATATACGTATGTGTATAT	CDKL4	ENSG00000205111.10	transcript	ENST00000451199.7	protein_coding	7/9			chr2	TogoVar
CDKL4_chr2_39170646_39248970	39185422	ATATACAT others(15): Show ATATACATATGTATATATACATG	A A	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0162	1	290	0.0035	-22	c.736 others(37): Show c.736-797_736-776delCATGTATATATACATATGTATA	CDKL4	ENSG00000205111.10	transcript	ENST00000451199.7	protein_coding	7/9			chr2	TogoVar
CDKL5_chrX_18420608_18645196	18626661	CCTCTCTC others(15): Show CCTCTCTCTCTCTCTCTCTCTCT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	192	0.0052	-22	c.249 others(41): Show c.2496+1456_2496+1477delTCTCTCTCTCTCTCTCTCTCTC	CDKL5	ENSG00000008086.13	transcript	ENST00000623535.2	protein_coding	17/17		INFO_REALIGN_3_PRIME	chrX	TogoVar

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