Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CSMD3_chr8_112217928_113441939	112897680	CTCTCTCT others(15): Show CTCTCTCTCTCTCTCTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0010 a0010	a0010c0025 a0010c0025	a0010c0025t0003 a0010c0025t0003	a0010c0025t0003g0052 a0010c0025t0003g0052	1	80	0.0125	-22	c.163 others(43): Show c.1633+23925_1633+23946delCACACACAGAGAGAGAGAGAGA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	10/70			chr8	TogoVar
CSMD3_chr8_112217928_113441939	113112386	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 NA19043.hp2 HG01074.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0023 a0001c0001t0004g0018 a0001c0001t0003g0023 a0001c0001t0004g0018	2	80	0.0250	-22	c.710 others(41): Show c.710-13445_710-13424delATATATATATATATATATATAT	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	4/70			chr8	TogoVar
CSNK1D_chr17_82237667_82278700	82260188	GTGGTGAC others(15): Show GTGGTGACTGATGGTGTACTGAC	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 NA19240.hp1 HG02886.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0036 a0001c0001t0009g0036	2	320	0.0063	-22	c.188 others(39): Show c.188-4633_188-4612delGTCAGTACACCATCAGTCACCA	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding	2/8			chr17	TogoVar
CSNK1D_chr17_82237667_82278700	82273726	CGGGGCGG others(15): Show CGGGGCGGGGCCGCGGCGCTCCA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	320	0.0031	-22	c.-36 others(31): Show c.-367_-346delTGGAGCGCCGCGGCCCCGCCCC	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding		27		chr17	TogoVar
CSNK1G1_chr15_64160525_64361173	64229902	ATTTTTTT others(15): Show ATTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02280.hp2 HG02451.hp1 others(7): Show HG01109.hp2 HG02280.hp2 HG02451.hp1 HG02572.hp1 HG02965.hp2 HG03130.hp1 HG03195.hp2 HG03453.hp1 HG03579.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 others(4): Show a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0023 a0001c0001t0036	a0001c0001t0010g0115 a0001c0001t0010g0120 a0001c0001t0010g0122 others(7): Show a0001c0001t0010g0115 a0001c0001t0010g0120 a0001c0001t0010g0122 a0001c0001t0012g0116 a0001c0001t0012g0119 a0001c0001t0017g0135 a0001c0001t0018g0136 a0001c0001t0019g0123 a0001c0001t0023g0121 a0001c0001t0036g0117	10	176	0.0568	-22	c.293 others(41): Show c.293-13211_293-13190delAAAAAAAAAAAAAAAAAAAAAA	CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding	4/11			chr15	TogoVar
CSNK2A1_chr20_467498_548790	485089	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0088 a0001c0001t0088	a0001c0001t0088g0311 a0001c0001t0088g0311	1	316	0.0032	-22	c.106 others(41): Show c.1061-1035_1061-1014delATTTTTTTTTTTTTTTTTTTTT	CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13			chr20	TogoVar
CSNK2A2_chr16_58152907_58203106	58155748	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00323.hp2 others(116): Show HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp2 HG00673.hp1 HG01071.hp1 HG01081.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01257.hp1 HG01515.hp1 HG01516.hp1 HG01517.hp2 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02145.hp1 HG02165.hp1 HG02258.hp1 HG02293.hp2 HG02523.hp2 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02735.hp1 HG02738.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03225.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03669.hp1 HG03669.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18941.hp1 NA18944.hp2 NA18945.hp1 NA18947.hp2 NA18948.hp1 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18965.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18978.hp2 NA18980.hp2 NA18982.hp1 NA18984.hp1 NA18989.hp1 NA18991.hp1 NA18993.hp1 NA18998.hp2 NA19003.hp1 NA19004.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19060.hp2 NA19063.hp2 NA19067.hp1 NA19067.hp2 NA19072.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19088.hp1 NA19091.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0004	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0008 others(97): Show a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0248 a0001c0001t0001g0281 a0001c0002t0001g0009 a0001c0002t0001g0117 a0001c0002t0001g0123 a0001c0003t0001g0249 a0002c0004t0001g0137	119	400	0.2975	-22	c.26 others(33): Show c.2601_*2622delACACACACACACACACACACAC	CSNK2A2	ENSG00000070770.10	transcript	ENST00000262506.8	protein_coding		2158		chr16	TogoVar
CSNKA2IP_chr3_88333456_88472594	88446034	CTTTCTTT others(15): Show CTTTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03209.hp1 HG03471.hp1 others(1): Show HG02257.hp2 HG03209.hp1 HG03471.hp1 HG03579.hp1	a0002 a0004 a0002 a0004	a0002c0002 a0004c0005 a0002c0002 a0004c0005	a0002c0002t0001 a0004c0005t0001 a0004c0005t0002 a0002c0002t0001 a0004c0005t0001 a0004c0005t0002	a0002c0002t0001g0129 a0004c0005t0001g0248 a0004c0005t0002g0271 others(1): Show a0002c0002t0001g0129 a0004c0005t0001g0248 a0004c0005t0002g0271 a0004c0005t0002g0272	4	386	0.0104	-22	c.-27 others(43): Show c.-270-19052_-270-19031delTTCTTTCTTTCTTTCTTTCTTT	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSNKA2IP_chr3_88333456_88472594	88470717	TATATATA others(15): Show TATATATATATATATACATACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0001 a0002c0006t0001	a0002c0006t0001g0246 a0002c0006t0001g0246	1	386	0.0026	-22	c.31 others(33): Show c.3156_*3177delATATATATATATATACATACAC	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding		3124		chr3	TogoVar
CSRNP3_chr2_165464698_165694407	165653972	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02886.hp2 HG02965.hp2 others(4): Show HG00735.hp2 HG02886.hp2 HG02965.hp2 HG03139.hp2 HG03225.hp1 HG03471.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0007 a0001c0001t0018 a0001c0001t0081 others(2): Show a0001c0001t0007 a0001c0001t0018 a0001c0001t0081 a0001c0002t0021 a0002c0003t0050	a0001c0001t0007g0203 a0001c0001t0018g0061 a0001c0001t0018g0122 others(4): Show a0001c0001t0007g0203 a0001c0001t0018g0061 a0001c0001t0018g0122 a0001c0001t0018g0210 a0001c0001t0081g0237 a0001c0002t0021g0101 a0002c0003t0050g0209	7	246	0.0285	-22	c.149 others(39): Show c.149-3774_149-3753delAAAAAAAAAAAAAAAAAAAAAA	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSRP2_chr12_76853709_76884019	76867800	GAAACAGA others(15): Show GAAACAGAGTGCTACTAAGTAGA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02723.hp1 HG01884.hp2 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0168 a0001c0001t0001g0353 a0001c0001t0001g0168 a0001c0001t0001g0353	2	388	0.0052	-22	c.-1- others(37): Show c.-1-1561_-1-1540delTCTACTTAGTAGCACTCTGTTT	CSRP2	ENSG00000175183.10	transcript	ENST00000311083.10	protein_coding	1/5			chr12	TogoVar
CSTF3_chr11_33079584_33166480	33163876	AATATATA others(15): Show AATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19057.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0278 a0001c0001t0001g0278	1	360	0.0028	-22	c.-25 others(33): Show c.-2573_-2552delATATATATATATATATATATAT	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2397		chr11	TogoVar
CTAG1A_chrX_154580133_154591816	154584031	ACGTTTTT others(15): Show ACGTTTTTAGTTTCCACATGAGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0013 a0003c0003t0001g0013	1	293	0.0034	-22	c.-11 others(33): Show c.-1175_-1154delCGTTTTTAGTTTCCACATGAGT	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding		1101		chrX	TogoVar
CTBS_chr1_84544611_84579440	84560099	AAGAAAGA others(15): Show AAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0007 a0002c0003t0007	a0002c0003t0007g0056 a0002c0003t0007g0056	1	340	0.0029	-22	c.957 others(39): Show c.957+3136_957+3157delCTTTCTTTCTTTCTTTCTTTCT	CTBS	ENSG00000117151.13	transcript	ENST00000370630.6	protein_coding	6/6			chr1	TogoVar
CTC1_chr17_8219815_8253056	8237665	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0234 a0001c0002t0003g0234	1	402	0.0025	-22	c.648 others(37): Show c.648-168_648-147delTTTTTTTTTTTTTTTTTTTTTT	CTC1	ENSG00000178971.17	transcript	ENST00000651323.1	protein_coding	4/22			chr17	TogoVar
CTCF_chr16_67557526_67644177	67629746	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02602.hp2 HG02630.hp2 others(2): Show HG02145.hp1 HG02602.hp2 HG02630.hp2 HG02735.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0136 a0001c0001t0003g0137 a0001c0001t0003g0138 others(2): Show a0001c0001t0003g0136 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0141 a0001c0001t0003g0143	5	168	0.0298	-22	c.183 others(39): Show c.1837+238_1837+259delTTTTTTTTTTTTTTTTTTTTTT	CTCF	ENSG00000102974.16	transcript	ENST00000264010.10	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
CTDNEP1_chr17_7238591_7256734	7247553	CCGCCTCC others(15): Show CCGCCTCCCAGGTTCAAGCAATT	C C	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0053 a0001c0002t0002g0053	1	398	0.0025	-22	c.103 others(37): Show c.103-232_103-211delAATTGCTTGAACCTGGGAGGCG	CTDNEP1	ENSG00000175826.12	transcript	ENST00000574322.6	protein_coding	1/7			chr17	TogoVar
CTIF_chr18_48534031_48868217	48669790	CATTTATA others(15): Show CATTTATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02698.hp2 HG00642.hp1 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0033 a0001c0001t0005 a0001c0001t0033	a0001c0001t0005g0067 a0001c0001t0033g0092 a0001c0001t0005g0067 a0001c0001t0033g0092	2	144	0.0139	-22	c.432 others(37): Show c.432-876_432-855delTTATATATATATATATATATAT	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48698104	TAAAAAAA others(15): Show TAAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02738.hp1 HG03654.hp2 HG01243.hp1 HG02738.hp1 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0032 a0001c0001t0001g0077 a0001c0001t0012g0091 a0001c0001t0001g0032 a0001c0001t0001g0077 a0001c0001t0012g0091	3	144	0.0208	-22	c.508 others(41): Show c.508-13499_508-13478delAAAAAAAAAAAAAAAAAAAAAA	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTLA4_chr2_203862771_203878965	203873327	CATATATA others(15): Show CATATATATATATATATATATAT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00323.hp1 HG00673.hp1 HG01081.hp1 others(19): Show HG00323.hp1 HG00673.hp1 HG01081.hp1 HG01175.hp1 HG02109.hp1 HG02129.hp1 HG02257.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02922.hp2 HG02976.hp2 NA18957.hp1 NA18957.hp2 NA18965.hp2 NA19000.hp1 NA19000.hp2 NA19007.hp1 NA19066.hp1 NA19075.hp1 NA19078.hp1 NA19088.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0005 a0002c0002t0005 a0001c0001t0005 a0002c0002t0005	a0001c0001t0005g0028 a0002c0002t0005g0001 a0001c0001t0005g0028 a0002c0002t0005g0001	22	420	0.0524	-22	c.55 others(31): Show c.550_*571delATATATATATATATATATATAT	CTLA4	ENSG00000163599.18	transcript	ENST00000648405.2	protein_coding	4/4	550	INFO_REALIGN_3_PRIME	chr2	TogoVar
CTLA4_chr2_203862771_203878965	203873362	ATATATAT others(15): Show ATATATATATATATATATATATT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0030 a0002c0002t0030	a0002c0002t0030g0001 a0002c0002t0030g0001	1	420	0.0024	-22	c.55 others(31): Show c.552_*573delATATATATATATATATATATTT	CTLA4	ENSG00000163599.18	transcript	ENST00000648405.2	protein_coding	4/4	552	INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA1_chr5_138748425_138940034	138755845	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0026 a0001c0002t0005g0026	1	180	0.0056	-22	c.-3+ others(37): Show c.-3+2349_-3+2370delTTTTTTTTTTTTTTTTTTTTTT	CTNNA1	ENSG00000044115.21	transcript	ENST00000302763.12	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
CTNNA2_chr2_79508051_80653780	79521107	GATATATA others(15): Show GATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0017 a0001c0003t0005g0017	1	68	0.0147	-22	c.-6+ others(37): Show c.-6+7940_-6+7961delTATATATATATATATATATATA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79531195	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01884.hp1 HG02148.hp1 others(6): Show HG00735.hp2 HG01884.hp1 HG02148.hp1 HG02622.hp1 HG02630.hp2 HG02809.hp2 HG02970.hp1 HG03688.hp2 NA18906.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0014 a0002c0006 a0003c0015	a0001c0001t0001 a0001c0002t0002 a0001c0003t0001 others(4): Show a0001c0001t0001 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0001c0014t0001 a0002c0006t0001 a0003c0015t0001	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(6): Show a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0002t0002g0015 a0001c0003t0001g0013 a0001c0004t0001g0021 a0001c0014t0001g0016 a0002c0006t0001g0020 a0003c0015t0001g0014	9	68	0.1324	-22	c.-6+ others(39): Show c.-6+18008_-6+18029delTATATATATATATATATATATA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79756049	ATTAGCTG others(15): Show ATTAGCTGAGGGCCCAGGAGTAC	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02630.hp1 HG02647.hp2 others(6): Show HG00735.hp2 HG02630.hp1 HG02647.hp2 HG02886.hp2 HG02970.hp2 HG03130.hp1 HG03453.hp1 HG03453.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 a0001c0001 a0001c0002 a0001c0009	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0009t0001	a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0058 others(6): Show a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0058 a0001c0002t0001g0007 a0001c0002t0001g0023 a0001c0002t0001g0034 a0001c0002t0002g0015 a0001c0002t0002g0065 a0001c0009t0001g0003	9	68	0.1324	-22	c.298 others(41): Show c.298+11470_298+11491delAGCTGAGGGCCCAGGAGTACTT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79982192	CTATATAT others(15): Show CTATATATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0059 a0001c0004t0001g0059	1	68	0.0147	-22	c.105 others(43): Show c.1056+72423_1056+72444delATATATATATATATATATATAT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80043077	TTCTTTCT others(15): Show TTCTTTCTTTCTTTCTTTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02148.hp1 HG01106.hp2 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0010 a0001c0002t0001g0047 a0001c0001t0001g0010 a0001c0002t0001g0047	2	68	0.0294	-22	c.105 others(45): Show c.1056+133284_1056+133305delTTCTTTCTTTCTTTCTCTCTCT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80075629	TATACATG others(15): Show TATACATGTATAAATATTATAAA	T T	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0044 a0001c0003t0002g0044	1	68	0.0147	-22	c.105 others(45): Show c.1056+165834_1056+165855delTACATGTATAAATATTATAAAA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80596279	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	68	0.0147	-22	c.218 others(41): Show c.2189+6821_2189+6842delTTTTTTTTTTTTTTTTTTTTTT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80596307	TTTTTTTT others(15): Show TTTTTTTTTTTTTTTTTTTTTGA	T T	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	68	0.0147	-22	c.218 others(41): Show c.2189+6823_2189+6844delTTTTTTTTTTTTTTTTTTTTGA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	15/18			chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80606392	ACACACAC others(15): Show ACACACACACACACACACACACC	A A	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	68	0.0147	-22	c.229 others(41): Show c.2296-1790_2296-1769delACACACACACACACACACACCC	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	16/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA3_chr10_65907523_67701195	66178399	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01243.hp1 HG02622.hp2 others(8): Show HG01081.hp2 HG01243.hp1 HG02622.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp1 HG02965.hp1 HG03130.hp2 HG03195.hp1 NA18960.hp2 NA18964.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0001c0005 others(3): Show a0001c0001 a0001c0003 a0001c0005 a0001c0007 a0002c0002 a0005c0010	a0001c0001t0006 a0001c0003t0008 a0001c0003t0022 others(7): Show a0001c0001t0006 a0001c0003t0008 a0001c0003t0022 a0001c0005t0010 a0001c0007t0015 a0002c0002t0001 a0002c0002t0003 a0002c0002t0017 a0002c0002t0026 a0005c0010t0002	a0001c0001t0006g0027 a0001c0003t0008g0002 a0001c0003t0022g0022 others(8): Show a0001c0001t0006g0027 a0001c0003t0008g0002 a0001c0003t0022g0022 a0001c0005t0010g0029 a0001c0005t0010g0034 a0001c0007t0015g0016 a0002c0002t0001g0035 a0002c0002t0003g0042 a0002c0002t0017g0040 a0002c0002t0026g0046 a0005c0010t0002g0021	11	46	0.2391	-22	c.188 others(43): Show c.1885-75172_1885-75151delTATATATATATATATATATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	13/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66199785	ATATATAT others(15): Show ATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0024 a0001c0001t0002g0024	1	46	0.0217	-22	c.188 others(43): Show c.1884+80663_1884+80684delAATATATATATATATATATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	13/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66222600	GAAAGAAA others(15): Show GAAAGAAAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01243.hp2 HG02280.hp2 others(7): Show HG01070.hp1 HG01243.hp2 HG02280.hp2 HG02965.hp2 HG03130.hp2 HG03579.hp1 HG06807.hp2 NA18960.hp2 NA18964.hp1 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0016 a0001c0001t0021 a0002c0002t0002 others(6): Show a0001c0001t0016 a0001c0001t0021 a0002c0002t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0005 a0002c0002t0013 a0002c0002t0017 a0002c0002t0026	a0001c0001t0016g0003 a0001c0001t0021g0012 a0002c0002t0002g0013 others(7): Show a0001c0001t0016g0003 a0001c0001t0021g0012 a0002c0002t0002g0013 a0002c0002t0003g0039 a0002c0002t0003g0042 a0002c0002t0004g0028 a0002c0002t0005g0014 a0002c0002t0013g0026 a0002c0002t0017g0040 a0002c0002t0026g0046	10	46	0.2174	-22	c.188 others(43): Show c.1884+57848_1884+57869delTTCTTTCTTTCTTTCTTTCTTT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	13/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66346230	TATATATA others(15): Show TATATATATATATATATAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0014 a0002c0002t0005g0014	1	46	0.0217	-22	c.173 others(43): Show c.1732+32900_1732+32921delCTCTCTATATATATATATATAT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66346232	TATATATA others(15): Show TATATATATATATATAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0002 a0001c0003t0008g0002	1	46	0.0217	-22	c.173 others(43): Show c.1732+32898_1732+32919delCTCTCTCTATATATATATATAT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66346234	TATATATA others(15): Show TATATATATATATAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01081.hp1 HG02280.hp2 HG01070.hp1 HG01081.hp1 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0021 a0001c0001t0023 a0001c0001t0016 a0001c0001t0021 a0001c0001t0023	a0001c0001t0016g0003 a0001c0001t0021g0012 a0001c0001t0023g0011 a0001c0001t0016g0003 a0001c0001t0021g0012 a0001c0001t0023g0011	3	46	0.0652	-22	c.173 others(43): Show c.1732+32896_1732+32917delCTCTCTCTCTATATATATATAT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66346236	TATATATA others(15): Show TATATATATATAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02818.hp1 NA18612.hp2 HG02818.hp1 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0020 a0001c0001t0004 a0001c0001t0020	a0001c0001t0004g0043 a0001c0001t0020g0030 a0001c0001t0004g0043 a0001c0001t0020g0030	2	46	0.0435	-22	c.173 others(43): Show c.1732+32894_1732+32915delCTCTCTCTCTCTATATATATAT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66487181	ATTTTTTT others(15): Show ATTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0005 a0005	a0005c0010 a0005c0010	a0005c0010t0002 a0005c0010t0002	a0005c0010t0002g0021 a0005c0010t0002g0021	1	46	0.0217	-22	c.153 others(43): Show c.1531+33414_1531+33435delAAAAAAAAAAAAAAAAAAAAAA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	11/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66543911	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03579.hp2 HG02717.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0019 a0001c0004t0007 a0001c0001t0019 a0001c0004t0007	a0001c0001t0019g0019 a0001c0004t0007g0005 a0001c0001t0019g0019 a0001c0004t0007g0005	2	46	0.0435	-22	c.137 others(43): Show c.1375-23160_1375-23139delTATATATATATATATATATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66747554	CACTTAGC others(15): Show CACTTAGCTACCTTCCAGTCATA	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0030 a0001c0001t0020g0030	1	46	0.0217	-22	c.128 others(43): Show c.1281+18688_1281+18709delTATGACTGGAAGGTAGCTAAGT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66840356	TCTCTCTC others(15): Show TCTCTCTCTCTCTCTCTCACACA	T T	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0019 a0001c0001t0019g0019	1	46	0.0217	-22	c.104 others(43): Show c.1048-64854_1048-64833delTGTGTGAGAGAGAGAGAGAGAG	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	7/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	67564677	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03579.hp2 HG06807.hp1 others(6): Show HG02818.hp1 HG03579.hp2 HG06807.hp1 NA18612.hp2 NA18960.hp1 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA19080.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0008 a0001c0001 a0002c0002 a0004c0008	a0001c0001t0004 a0001c0001t0019 a0001c0001t0020 others(6): Show a0001c0001t0004 a0001c0001t0019 a0001c0001t0020 a0001c0001t0024 a0001c0001t0025 a0002c0002t0002 a0002c0002t0003 a0002c0002t0017 a0004c0008t0005	a0001c0001t0004g0043 a0001c0001t0019g0019 a0001c0001t0020g0030 others(6): Show a0001c0001t0004g0043 a0001c0001t0019g0019 a0001c0001t0020g0030 a0001c0001t0024g0044 a0001c0001t0025g0045 a0002c0002t0002g0013 a0002c0002t0003g0042 a0002c0002t0017g0040 a0004c0008t0005g0033	9	46	0.1957	-22	c.293 others(41): Show c.293-25030_293-25009delTATATATATATATATATATATA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	3/17			chr10	TogoVar
CTNND2_chr5_10966836_11909446	11017583	CATATATA others(15): Show CATATATATATATATCTTTCCAT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp2 HG02647.hp1 others(14): Show HG02258.hp1 HG02258.hp2 HG02647.hp1 HG02647.hp2 HG02922.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp1 NA19043.hp2 NA19068.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0002c0008	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0003t0001 a0001c0004t0001 a0001c0005t0001 a0001c0006t0002 a0001c0009t0001 a0002c0008t0001	a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 others(14): Show a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0003g0026 a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0001g0013 a0001c0002t0001g0015 a0001c0003t0001g0007 a0001c0004t0001g0019 a0001c0005t0001g0020 a0001c0006t0002g0025 a0001c0009t0001g0008 a0002c0008t0001g0014	17	26	0.6539	-22	c.308 others(39): Show c.3084+369_3084+390delATGGAAAGATATATATATATAT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	18/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11127927	GAGGCCAG others(15): Show GAGGCCAGAGGGTGGACTGTGGT	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp2 HG02647.hp2 others(4): Show HG02258.hp1 HG02258.hp2 HG02647.hp2 HG03130.hp2 HG03471.hp2 NA19043.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0006t0002	a0001c0001t0001g0024 a0001c0002t0001g0001 a0001c0002t0001g0006 others(4): Show a0001c0001t0001g0024 a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0001g0013 a0001c0002t0001g0015 a0001c0003t0001g0007 a0001c0006t0002g0025	7	26	0.2692	-22	c.216 others(43): Show c.2160-10382_2160-10361delACCACAGTCCACCCTCTGGCCT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	12/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11623800	GTGTGTAT others(15): Show GTGTGTATGTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0008 a0001c0009t0001g0008	1	26	0.0385	-22	c.175 others(41): Show c.175-58766_175-58745delTATATATATATATACATACACA	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	2/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11817410	GGAGAGAG others(15): Show GGAGAGAGAGAGAGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG02647.hp1 NA18522.hp1 NA19043.hp2 HG02647.hp1 NA18522.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0002t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0002t0001g0006	3	26	0.1154	-22	c.38- others(39): Show c.38-85160_38-85139delTCTCTCTCTCTCTCTCTCTCTC	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	1/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11847126	TTTTATAT others(15): Show TTTTATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	26	0.0385	-22	c.37+ others(39): Show c.37+56669_37+56690delTATATATATATATATATATAAA	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	1/21			chr5	TogoVar
CTSB_chr8_11837524_11873087	11839668	TAAAAAAA others(15): Show TAAAAAAAAAAAAAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp1 HG02723.hp1 HG03098.hp2 others(3): Show HG02717.hp1 HG02723.hp1 HG03098.hp2 HG03225.hp1 HG03540.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0001c0003 a0002c0002	a0001c0003t0018 a0002c0002t0018 a0002c0002t0049 a0001c0003t0018 a0002c0002t0018 a0002c0002t0049	a0001c0003t0018g0169 a0001c0003t0018g0256 a0002c0002t0018g0160 others(3): Show a0001c0003t0018g0169 a0001c0003t0018g0256 a0002c0002t0018g0160 a0002c0002t0018g0200 a0002c0002t0049g0372 a0002c0002t0049g0374	6	438	0.0137	-22	c.54 others(33): Show c.5435_*5456delTTTTTTTTTTTTTTTTTTTTTT	CTSB	ENSG00000164733.23	transcript	ENST00000353047.11	protein_coding		2855		chr8	TogoVar
CTSC_chr11_88288592_88342736	88290844	CATATATA others(15): Show CATATATATATATATATATATAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01069.hp1 HG02145.hp1 others(9): Show HG00639.hp1 HG01069.hp1 HG02145.hp1 HG02280.hp2 NA18612.hp2 NA18943.hp1 NA18944.hp1 NA18947.hp1 NA19074.hp2 NA19080.hp1 NA19088.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0029 a0001c0001t0001g0044 others(4): Show a0001c0001t0001g0013 a0001c0001t0001g0029 a0001c0001t0001g0044 a0001c0001t0001g0126 a0001c0001t0001g0154 a0001c0001t0001g0280 a0001c0001t0001g0282	12	434	0.0277	-22	c.31 others(33): Show c.3140_*3161delATATATATATATATATATATAT	CTSC	ENSG00000109861.17	transcript	ENST00000227266.10	protein_coding		2747		chr11	TogoVar

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