Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FOXN3_chr14_89151177_89422233	89363968	ATATATAT others(15): Show ATATATATATATATATATATAAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01070.hp2 HG01123.hp1 others(7): Show HG00639.hp2 HG01070.hp2 HG01123.hp1 HG01255.hp2 HG01517.hp1 HG02145.hp1 HG03017.hp1 HG03239.hp1 HG03688.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0012 a0001c0001t0016 a0001c0001t0018 a0001c0001t0024	a0001c0001t0001g0035 a0001c0001t0001g0101 a0001c0001t0002g0106 others(7): Show a0001c0001t0001g0035 a0001c0001t0001g0101 a0001c0001t0002g0106 a0001c0001t0005g0096 a0001c0001t0005g0097 a0001c0001t0005g0099 a0001c0001t0012g0107 a0001c0001t0016g0222 a0001c0001t0018g0091 a0001c0001t0024g0105	10	230	0.0435	-22	c.544 others(41): Show c.544-13182_544-13161delATTATATATATATATATATATA	FOXN3	ENSG00000053254.16	transcript	ENST00000557258.6	protein_coding	2/5			chr14	TogoVar
FOXO4_chrX_71090851_71108532	71094259	GAAAGAAA others(15): Show GAAAGAAAGAAAGAAAGAAAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp1 HG01169.hp2 HG01256.hp1 others(1): Show HG01168.hp1 HG01169.hp2 HG01256.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0006 a0001c0001t0002g0002 a0001c0001t0001g0006 a0001c0001t0002g0002	4	295	0.0136	-22	c.-22 others(33): Show c.-2269_-2248delAAAGAAAGAAAGAAAGAAAGAA	FOXO4	ENSG00000184481.17	transcript	ENST00000374259.8	protein_coding		1591		chrX	TogoVar
FOXP1_chr3_70949708_71588728	71226446	ACCCGGCA others(15): Show ACCCGGCAGCCATCCTGAAAATG	A A	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01496.hp2 HG01516.hp1 others(2): Show HG01071.hp2 HG01496.hp2 HG01516.hp1 HG03239.hp2 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 others(2): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0050	a0001c0001t0002g0080 a0001c0001t0008g0039 a0001c0001t0009g0029 others(2): Show a0001c0001t0002g0080 a0001c0001t0008g0039 a0001c0001t0009g0029 a0001c0001t0010g0091 a0001c0001t0050g0095	5	96	0.0521	-22	c.-11 others(41): Show c.-11-28076_-11-28055delCATTTTCAGGATGGCTGCCGGG	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71308749	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG03540.hp2 HG01071.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0031 a0001c0001t0018 a0001c0001t0031	a0001c0001t0018g0032 a0001c0001t0031g0079 a0001c0001t0018g0032 a0001c0001t0031g0079	2	96	0.0208	-22	c.-72 others(39): Show c.-72-8891_-72-8870delCACACACACACACACACACACA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP2_chr7_114409815_114698765	114645129	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0111	1	174	0.0058	-22	c.109 others(39): Show c.1094+369_1094+390delATATATATATATATATATATAT	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXR1_chr11_118966761_118986287	118983537	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG02155.hp1 HG02622.hp2 others(5): Show HG00099.hp1 HG02155.hp1 HG02622.hp2 HG02738.hp1 NA18939.hp1 NA18968.hp1 NA18973.hp1 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0046 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0046 a0001c0001t0001g0103	8	430	0.0186	-22	c.23 others(33): Show c.2302_*2323delTGTGTGTGTGTGTGTGTGTGTG	FOXR1	ENSG00000176302.13	transcript	ENST00000317011.8	protein_coding		2251		chr11	TogoVar
FRAS1_chr4_78052323_78549269	78420879	CATATATA others(15): Show CATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01071.hp2 HG01256.hp1 others(6): Show HG00140.hp1 HG01071.hp2 HG01256.hp1 HG03017.hp2 HG03834.hp1 HG03942.hp2 HG04115.hp1 HG04199.hp1 NA20805.hp1	a0001 a0003 a0014 others(3): Show a0001 a0003 a0014 a0020 a0050 a0054	a0001c0001 a0003c0002 a0014c0008 others(4): Show a0001c0001 a0003c0002 a0014c0008 a0020c0092 a0020c0106 a0050c0027 a0054c0065	a0001c0001t0009 a0003c0002t0002 a0014c0008t0002 others(4): Show a0001c0001t0009 a0003c0002t0002 a0014c0008t0002 a0020c0092t0005 a0020c0106t0006 a0050c0027t0047 a0054c0065t0002	a0001c0001t0009g0124 a0003c0002t0002g0021 a0003c0002t0002g0050 others(6): Show a0001c0001t0009g0124 a0003c0002t0002g0021 a0003c0002t0002g0050 a0014c0008t0002g0052 a0014c0008t0002g0062 a0020c0092t0005g0090 a0020c0106t0006g0074 a0050c0027t0047g0006 a0054c0065t0002g0051	9	178	0.0506	-22	c.454 others(39): Show c.4541-963_4541-942delATATATATATATATATATATAT	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	33/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FREM1_chr9_14732152_14915428	14774511	ATCTCTCT others(15): Show ATCTCTCTCTCTCTCTCTCTCTC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp1 HG00733.hp1 others(36): Show HG00099.hp2 HG00438.hp1 HG00733.hp1 HG00735.hp1 HG01071.hp1 HG01071.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp1 HG01255.hp1 HG01361.hp2 HG01516.hp1 HG01952.hp1 HG01981.hp2 HG02071.hp1 HG02071.hp2 HG02132.hp2 HG02165.hp1 HG02300.hp2 HG02486.hp1 HG02602.hp1 HG02683.hp1 HG02735.hp1 HG03710.hp2 HG03831.hp1 HG04115.hp1 NA18612.hp2 NA18747.hp2 NA18942.hp2 NA18944.hp1 NA18945.hp2 NA18949.hp1 NA18972.hp2 NA18979.hp2 NA19009.hp1 NA19056.hp1 NA19060.hp2 NA19063.hp1 NA19086.hp1	a0002 a0003 a0004 others(21): Show a0002 a0003 a0004 a0005 a0007 a0010 a0011 a0016 a0019 a0023 a0034 a0035 a0046 a0053 a0054 a0057 a0058 a0069 a0079 a0083 a0095 a0099 a0107 a0112	a0002c0021 a0002c0023 a0002c0130 others(28): Show a0002c0021 a0002c0023 a0002c0130 a0003c0007 a0004c0015 a0004c0067 a0004c0177 a0004c0182 a0005c0121 a0007c0032 a0007c0100 a0007c0176 a0010c0073 a0011c0200 a0016c0018 a0019c0110 a0023c0214 a0034c0036 a0035c0131 a0046c0065 a0053c0089 a0054c0084 a0057c0091 a0058c0077 a0069c0076 a0079c0113 a0083c0204 a0095c0232 a0099c0191 a0107c0144 a0112c0141	a0002c0021t0001 a0002c0023t0002 a0002c0130t0001 others(30): Show a0002c0021t0001 a0002c0023t0002 a0002c0130t0001 a0003c0007t0001 a0004c0015t0001 a0004c0067t0002 a0004c0177t0002 a0004c0182t0002 a0005c0121t0001 a0007c0032t0001 a0007c0032t0011 a0007c0100t0001 a0007c0176t0002 a0010c0073t0001 a0011c0200t0002 a0016c0018t0001 a0019c0110t0001 a0023c0214t0001 a0034c0036t0001 a0034c0036t0002 a0035c0131t0001 a0046c0065t0001 a0053c0089t0001 a0054c0084t0001 a0057c0091t0001 a0058c0077t0001 a0069c0076t0001 a0079c0113t0001 a0083c0204t0002 a0095c0232t0001 a0099c0191t0002 a0107c0144t0001 a0112c0141t0001	a0002c0021t0001g0138 a0002c0021t0001g0226 a0002c0023t0002g0038 others(36): Show a0002c0021t0001g0138 a0002c0021t0001g0226 a0002c0023t0002g0038 a0002c0023t0002g0148 a0002c0023t0002g0256 a0002c0130t0001g0107 a0003c0007t0001g0134 a0004c0015t0001g0121 a0004c0015t0001g0162 a0004c0067t0002g0127 a0004c0177t0002g0115 a0004c0182t0002g0110 a0005c0121t0001g0103 a0007c0032t0001g0246 a0007c0032t0011g0002 a0007c0100t0001g0015 a0007c0176t0002g0343 a0010c0073t0001g0320 a0011c0200t0002g0131 a0016c0018t0001g0225 a0016c0018t0001g0293 a0016c0018t0001g0339 a0019c0110t0001g0114 a0023c0214t0001g0129 a0034c0036t0001g0076 a0034c0036t0002g0111 a0035c0131t0001g0247 a0046c0065t0001g0180 a0053c0089t0001g0007 a0054c0084t0001g0003 a0057c0091t0001g0236 a0058c0077t0001g0152 a0069c0076t0001g0249 a0079c0113t0001g0074 a0083c0204t0002g0124 a0095c0232t0001g0227 a0099c0191t0002g0023 a0107c0144t0001g0232 a0112c0141t0001g0229	39	346	0.1127	-22	c.485 others(41): Show c.4857+1256_4857+1277delGAGAGAGAGAGAGAGAGAGAGA	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding	25/36			chr9	TogoVar
FREM1_chr9_14732152_14915428	14860694	CACACATA others(15): Show CACACATATATACACACATATAT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01358.hp2 HG02300.hp1 others(1): Show HG01106.hp2 HG01358.hp2 HG02300.hp1 NA20752.hp1	a0002 a0012 a0119 others(1): Show a0002 a0012 a0119 a0120	a0002c0021 a0012c0116 a0119c0228 others(1): Show a0002c0021 a0012c0116 a0119c0228 a0120c0235	a0002c0021t0001 a0012c0116t0001 a0119c0228t0001 others(1): Show a0002c0021t0001 a0012c0116t0001 a0119c0228t0001 a0120c0235t0001	a0002c0021t0001g0144 a0012c0116t0001g0068 a0119c0228t0001g0133 others(1): Show a0002c0021t0001g0144 a0012c0116t0001g0068 a0119c0228t0001g0133 a0120c0235t0001g0273	4	346	0.0116	-22	c.330 others(39): Show c.330-1232_330-1211delATATATGTGTGTATATATGTGT	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding	3/36			chr9	TogoVar
FREM1_chr9_14732152_14915428	14914072	GTGTGTAT others(15): Show GTGTGTATATATATATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG01884.hp2 HG02257.hp2 others(20): Show HG01243.hp2 HG01884.hp2 HG02257.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02647.hp1 HG02717.hp2 HG02818.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 NA18906.hp1	a0001 a0003 a0009 others(16): Show a0001 a0003 a0009 a0013 a0018 a0028 a0031 a0036 a0037 a0039 a0051 a0061 a0064 a0078 a0082 a0105 a0109 a0113 a0118	a0001c0048 a0001c0222 a0003c0052 others(19): Show a0001c0048 a0001c0222 a0003c0052 a0003c0056 a0009c0053 a0013c0009 a0018c0233 a0028c0174 a0031c0146 a0036c0224 a0037c0114 a0037c0223 a0039c0137 a0051c0092 a0061c0153 a0064c0101 a0078c0170 a0082c0172 a0105c0139 a0109c0217 a0113c0140 a0118c0059	a0001c0048t0005 a0001c0222t0002 a0003c0052t0001 others(19): Show a0001c0048t0005 a0001c0222t0002 a0003c0052t0001 a0003c0056t0004 a0009c0053t0005 a0013c0009t0003 a0018c0233t0010 a0028c0174t0001 a0031c0146t0001 a0036c0224t0002 a0037c0114t0003 a0037c0223t0002 a0039c0137t0004 a0051c0092t0003 a0061c0153t0001 a0064c0101t0003 a0078c0170t0003 a0082c0172t0004 a0105c0139t0005 a0109c0217t0003 a0113c0140t0001 a0118c0059t0001	a0001c0048t0005g0172 a0001c0222t0002g0219 a0003c0052t0001g0034 others(20): Show a0001c0048t0005g0172 a0001c0222t0002g0219 a0003c0052t0001g0034 a0003c0052t0001g0035 a0003c0056t0004g0214 a0009c0053t0005g0048 a0013c0009t0003g0210 a0018c0233t0010g0001 a0028c0174t0001g0173 a0031c0146t0001g0215 a0036c0224t0002g0220 a0037c0114t0003g0213 a0037c0223t0002g0218 a0039c0137t0004g0057 a0051c0092t0003g0051 a0061c0153t0001g0209 a0064c0101t0003g0212 a0078c0170t0003g0049 a0082c0172t0004g0050 a0105c0139t0005g0216 a0109c0217t0003g0054 a0113c0140t0001g0211 a0118c0059t0001g0046	23	346	0.0665	-22	c.-44 others(33): Show c.-4448_-4427delTATATATATATATATATACACA	FREM1	ENSG00000164946.20	transcript	ENST00000380880.4	protein_coding		3645		chr9	TogoVar
FREM2_chr13_38682077_38892131	38687054	CAGGGTCC others(15): Show CAGGGTCCGGGGACCTGGAAAGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0027 a0027	a0027c0053 a0027c0053	a0027c0053t0041 a0027c0053t0041	a0027c0053t0041g0116 a0027c0053t0041g0116	1	262	0.0038	-22	c.-29 others(31): Show c.-290_-269delAGGGTCCGGGGACCTGGAAAGT	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding		22		chr13	TogoVar
FREM2_chr13_38682077_38892131	38807188	GTTATATA others(15): Show GTTATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02257.hp2 HG02809.hp1 others(2): Show HG02109.hp1 HG02257.hp2 HG02809.hp1 HG02896.hp2 NA19043.hp2	a0006 a0014 a0016 others(2): Show a0006 a0014 a0016 a0031 a0037	a0006c0096 a0014c0022 a0016c0059 others(2): Show a0006c0096 a0014c0022 a0016c0059 a0031c0056 a0037c0063	a0006c0096t0015 a0014c0022t0014 a0016c0059t0043 others(2): Show a0006c0096t0015 a0014c0022t0014 a0016c0059t0043 a0031c0056t0015 a0037c0063t0014	a0006c0096t0015g0153 a0014c0022t0014g0193 a0016c0059t0043g0101 others(2): Show a0006c0096t0015g0153 a0014c0022t0014g0193 a0016c0059t0043g0101 a0031c0056t0015g0125 a0037c0063t0014g0104	5	262	0.0191	-22	c.601 others(43): Show c.6019+22381_6019+22402delTTATATATATATATATATATAT	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23			chr13	TogoVar
FREM2_chr13_38682077_38892131	38813464	TTCTCTCT others(15): Show TTCTCTCTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0012 a0004c0004t0012	a0004c0004t0012g0196 a0004c0004t0012g0196	1	262	0.0038	-22	c.601 others(43): Show c.6019+28689_6019+28710delTCTCTCTCTCTCTCTCTCTCTC	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
FREM2_chr13_38682077_38892131	38813500	CTCTCTCT others(15): Show CTCTCTCTCTCTCTCTCTCCTCT	C C	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0004 a0004	a0004c0089 a0004c0089	a0004c0089t0001 a0004c0089t0001	a0004c0089t0001g0239 a0004c0089t0001g0239	1	262	0.0038	-22	c.601 others(43): Show c.6019+28693_6019+28714delTCTCTCTCTCTCTCTCTCCTCT	FREM2	ENSG00000150893.11	transcript	ENST00000280481.9	protein_coding	6/23			chr13	TogoVar
FRMD3_chr9_83239622_83543401	83357242	CATACATA others(15): Show CATACATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01261.hp2 HG00140.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0166 a0001c0002t0003g0050 a0001c0001t0001g0166 a0001c0002t0003g0050	2	242	0.0083	-22	c.296 others(39): Show c.296-7507_296-7486delATATATATATATATATATGTAT	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	3/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83461665	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0158 a0001c0001t0001g0158	1	242	0.0041	-22	c.148 others(41): Show c.148-71979_148-71958delAAAAAAAAAAAAAAAAAAAAAA	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD3_chr9_83239622_83543401	83507687	CATACATA others(15): Show CATACATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02258.hp2 HG02622.hp2 others(4): Show HG02055.hp1 HG02258.hp2 HG02622.hp2 HG02717.hp1 HG02809.hp1 HG02895.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0015 others(3): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0015 a0001c0001t0038 a0001c0001t0039 a0001c0001t0056	a0001c0001t0001g0163 a0001c0001t0010g0094 a0001c0001t0015g0160 others(4): Show a0001c0001t0001g0163 a0001c0001t0010g0094 a0001c0001t0015g0160 a0001c0001t0015g0161 a0001c0001t0038g0091 a0001c0001t0039g0092 a0001c0001t0056g0162	7	242	0.0289	-22	c.147 others(41): Show c.147+30376_147+30397delATATATATATATATATATGTAT	FRMD3	ENSG00000172159.16	transcript	ENST00000304195.8	protein_coding	1/13			chr9	TogoVar
FRMD4A_chr10_13638706_14335924	13650407	CATGAGCA others(15): Show CATGAGCATGAACTCGTGTATGT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0130 a0001c0001t0004g0130	1	134	0.0075	-22	c.2+ others(37): Show c.2+1474_*2+1495delACATACACGAGTTCATGCTCAT	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	24/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13848595	AGTGTGTG others(15): Show AGTGTGTGTGTGTACGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01243.hp2 HG01255.hp2 others(14): Show HG00099.hp2 HG01243.hp2 HG01255.hp2 HG01358.hp2 HG01516.hp2 HG02572.hp2 HG02622.hp2 HG02738.hp2 HG02897.hp2 HG02970.hp2 HG03453.hp1 HG03579.hp1 HG03688.hp1 HG03688.hp2 HG03942.hp2 NA18747.hp2 NA18957.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0009 a0002c0006 a0004c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0021 a0001c0001t0023 a0001c0002t0001 a0001c0002t0002 a0001c0002t0014 a0001c0003t0018 a0001c0009t0002 a0002c0006t0010 a0004c0007t0003	a0001c0001t0001g0031 a0001c0001t0001g0041 a0001c0001t0002g0007 others(14): Show a0001c0001t0001g0031 a0001c0001t0001g0041 a0001c0001t0002g0007 a0001c0001t0002g0083 a0001c0001t0003g0089 a0001c0001t0003g0104 a0001c0001t0005g0119 a0001c0001t0005g0123 a0001c0001t0021g0059 a0001c0001t0023g0075 a0001c0002t0001g0116 a0001c0002t0002g0049 a0001c0002t0014g0082 a0001c0003t0018g0011 a0001c0009t0002g0006 a0002c0006t0010g0058 a0004c0007t0003g0068	17	134	0.1269	-22	c.111 others(41): Show c.111+10230_111+10251delACACACACGTACACACACACAC	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	3/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13856217	AGTGTGTG others(15): Show AGTGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG03130.hp2 NA18522.hp1 HG03130.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0009 a0001c0008t0001 a0001c0001t0009 a0001c0008t0001	a0001c0001t0009g0099 a0001c0008t0001g0061 a0001c0001t0009g0099 a0001c0008t0001g0061	2	134	0.0149	-22	c.111 others(39): Show c.111+2608_111+2629delACACACACACACACACACACAC	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	3/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	13881990	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00738.hp1 others(58): Show HG00099.hp1 HG00140.hp1 HG00738.hp1 HG00738.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01516.hp1 HG01516.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp1 HG02055.hp2 HG02109.hp1 HG02148.hp2 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02572.hp1 HG02622.hp1 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03139.hp1 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp1 HG03579.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 NA19009.hp2 NA19030.hp2 NA19043.hp2 NA20129.hp1 NA20129.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0011 a0002c0004 a0003c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0019 a0001c0001t0022 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0002t0007 a0001c0002t0014 a0001c0002t0025 a0001c0003t0001 a0001c0005t0003 a0001c0011t0002 a0002c0004t0002 a0002c0004t0010 a0003c0010t0012	a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0028 others(58): Show a0001c0001t0001g0013 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0050 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0096 a0001c0001t0001g0117 a0001c0001t0002g0020 a0001c0001t0002g0034 a0001c0001t0002g0039 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0054 a0001c0001t0002g0083 a0001c0001t0002g0087 a0001c0001t0002g0128 a0001c0001t0003g0021 a0001c0001t0003g0089 a0001c0001t0003g0122 a0001c0001t0003g0127 a0001c0001t0004g0016 a0001c0001t0004g0070 a0001c0001t0004g0130 a0001c0001t0005g0023 a0001c0001t0005g0030 a0001c0001t0005g0056 a0001c0001t0005g0119 a0001c0001t0006g0088 a0001c0001t0006g0113 a0001c0001t0006g0125 a0001c0001t0007g0060 a0001c0001t0007g0094 a0001c0001t0008g0036 a0001c0001t0008g0102 a0001c0001t0009g0047 a0001c0001t0009g0055 a0001c0001t0011g0018 a0001c0001t0011g0090 a0001c0001t0013g0040 a0001c0001t0015g0037 a0001c0001t0016g0002 a0001c0001t0019g0064 a0001c0001t0022g0051 a0001c0001t0027g0097 a0001c0001t0028g0134 a0001c0001t0029g0133 a0001c0002t0007g0048 a0001c0002t0007g0126 a0001c0002t0014g0082 a0001c0002t0025g0063 a0001c0003t0001g0010 a0001c0003t0001g0105 a0001c0005t0003g0003 a0001c0011t0002g0101 a0002c0004t0002g0084 a0002c0004t0002g0095 a0002c0004t0010g0012 a0003c0010t0012g0001	61	134	0.4552	-22	c.46- others(39): Show c.46-23100_46-23079delACACACACACACACACACACAC	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	2/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	14055440	CACACACA others(15): Show CACACACACACACACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0034	1	134	0.0075	-22	c.46- others(41): Show c.46-196550_46-196529delTTGTGTGTGTGTGTGTGTGTGT	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	2/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	14127958	CTTTCTTT others(15): Show CTTTCTTTCTTTCTTTCTTTCCT	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03453.hp2 HG02809.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0028 a0001c0001t0012g0069 a0001c0001t0001g0028 a0001c0001t0012g0069	2	134	0.0149	-22	c.45+ others(41): Show c.45+202078_45+202099delAGGAAAGAAAGAAAGAAAGAAA	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	2/24			chr10	TogoVar
FRMD4A_chr10_13638706_14335924	14261941	AACACACA others(15): Show AACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01256.hp2 HG01258.hp1 others(8): Show HG00140.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01516.hp1 HG01516.hp2 HG01981.hp2 NA18747.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0020 a0001c0001t0027 a0001c0002t0001 a0001c0002t0002 a0002c0004t0002	a0001c0001t0001g0031 a0001c0001t0001g0050 a0001c0001t0001g0096 others(8): Show a0001c0001t0001g0031 a0001c0001t0001g0050 a0001c0001t0001g0096 a0001c0001t0004g0025 a0001c0001t0005g0023 a0001c0001t0008g0022 a0001c0001t0020g0026 a0001c0001t0027g0097 a0001c0002t0001g0116 a0001c0002t0002g0049 a0002c0004t0002g0095	11	134	0.0821	-22	c.45+ others(39): Show c.45+68095_45+68116delGTGTGTGTGTGTGTGTGTGTGT	FRMD4A	ENSG00000151474.23	transcript	ENST00000357447.7	protein_coding	2/24			chr10	TogoVar
FRMD4B_chr3_69163782_69391088	69168097	TTAAAAAA others(15): Show TTAAAAAAAAAAAAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0055 a0003c0003t0055	a0003c0003t0055g0056 a0003c0003t0055g0056	1	224	0.0045	-22	c.37 others(33): Show c.3742_*3763delTTTTTTTTTTTTTTTTTTTTTA	FRMD4B	ENSG00000114541.15	transcript	ENST00000398540.8	protein_coding		684		chr3	TogoVar
FRMD4B_chr3_69163782_69391088	69265269	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0020 a0003c0005t0020	a0003c0005t0020g0138 a0003c0005t0020g0138	1	224	0.0045	-22	c.502 others(41): Show c.502-15192_502-15171delATATATATATATATATATATAT	FRMD4B	ENSG00000114541.15	transcript	ENST00000398540.8	protein_coding	5/22			chr3	TogoVar
FRMD4B_chr3_69163782_69391088	69267636	TAGAGAGA others(15): Show TAGAGAGAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0224 a0003c0003t0003g0224	1	224	0.0045	-22	c.502 others(41): Show c.502-17559_502-17538delCTCTCTCTCTCTCTCTCTCTCT	FRMD4B	ENSG00000114541.15	transcript	ENST00000398540.8	protein_coding	5/22			chr3	TogoVar
FRMD4B_chr3_69163782_69391088	69323608	GTATATAT others(15): Show GTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG02148.hp1 HG03139.hp1 others(2): Show HG01952.hp2 HG02148.hp1 HG03139.hp1 HG03471.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0002 others(1): Show a0001c0001 a0001c0009 a0002c0002 a0002c0014	a0001c0001t0002 a0001c0001t0025 a0001c0009t0001 others(2): Show a0001c0001t0002 a0001c0001t0025 a0001c0009t0001 a0002c0002t0001 a0002c0014t0016	a0001c0001t0002g0189 a0001c0001t0025g0176 a0001c0009t0001g0082 others(2): Show a0001c0001t0002g0189 a0001c0001t0025g0176 a0001c0009t0001g0082 a0002c0002t0001g0202 a0002c0014t0016g0068	5	224	0.0223	-22	c.163 others(41): Show c.163-10113_163-10092delTATATATATATATATATATATA	FRMD4B	ENSG00000114541.15	transcript	ENST00000398540.8	protein_coding	1/22			chr3	TogoVar
FRMD4B_chr3_69163782_69391088	69375203	TCATCCAT others(15): Show TCATCCATCCACCCCATCCCATC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01952.hp1 HG02129.hp1 others(18): Show HG01891.hp1 HG01952.hp1 HG02129.hp1 HG02257.hp1 HG02258.hp2 HG02280.hp2 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG02818.hp2 HG02886.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG03139.hp2 HG03225.hp1 HG03831.hp1 NA18944.hp1 NA18969.hp1 NA20129.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0006 a0010 a0011 a0015 a0016	a0001c0001 a0002c0002 a0003c0003 others(8): Show a0001c0001 a0002c0002 a0003c0003 a0003c0005 a0004c0006 a0005c0007 a0006c0015 a0010c0017 a0011c0024 a0015c0023 a0016c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 a0001c0001t0030 a0001c0001t0040 a0001c0001t0042 a0002c0002t0001 a0003c0003t0055 a0003c0005t0009 a0004c0006t0020 a0005c0007t0004 a0006c0015t0004 a0010c0017t0004 a0011c0024t0005 a0015c0023t0046 a0016c0027t0012	a0001c0001t0001g0205 a0001c0001t0001g0222 a0001c0001t0002g0083 others(18): Show a0001c0001t0001g0205 a0001c0001t0001g0222 a0001c0001t0002g0083 a0001c0001t0002g0113 a0001c0001t0002g0177 a0001c0001t0014g0008 a0001c0001t0014g0024 a0001c0001t0030g0067 a0001c0001t0040g0061 a0001c0001t0042g0070 a0002c0002t0001g0215 a0003c0003t0055g0056 a0003c0005t0009g0207 a0004c0006t0020g0062 a0005c0007t0004g0050 a0005c0007t0004g0055 a0006c0015t0004g0078 a0010c0017t0004g0208 a0011c0024t0005g0178 a0015c0023t0046g0071 a0016c0027t0012g0077	21	224	0.0938	-22	c.162 others(41): Show c.162+10603_162+10624delGATGGGATGGGGTGGATGGATG	FRMD4B	ENSG00000114541.15	transcript	ENST00000398540.8	protein_coding	1/22			chr3	TogoVar
FRMPD1_chr9_37645954_37751904	37741450	GACACACA others(15): Show GACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG04184.hp1 HG03831.hp1 HG04184.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0215 a0001c0002t0001g0240 a0001c0002t0001g0215 a0001c0002t0001g0240	2	334	0.0060	-22	c.235 others(39): Show c.2356+587_2356+608delACACACACACACACACACACAC	FRMPD1	ENSG00000070601.10	transcript	ENST00000377765.8	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr9	TogoVar
FRMPD4_chrX_12133473_12729523	12560742	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0049 a0001c0001t0002g0049	1	174	0.0058	-22	c.159 others(41): Show c.159-48955_159-48934delTTTTTTTTTTTTTTTTTTTTTT	FRMPD4	ENSG00000169933.17	transcript	ENST00000675598.1	protein_coding	2/16		INFO_REALIGN_3_PRIME	chrX	TogoVar
FRS2_chr12_69465388_69584793	69557622	GCGCGCGC others(15): Show GCGCGCGCGCGCGCGCAGGTGCA	G G	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0303 a0001c0001t0017g0303	1	342	0.0029	-22	c.-12 others(41): Show c.-121-4557_-121-4536delCGCGCGCGCGCGCGCAGGTGCA	FRS2	ENSG00000166225.9	transcript	ENST00000549921.6	protein_coding	3/8			chr12	TogoVar
FRYL_chr4_48492357_48785279	48506615	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00609.hp2 HG02040.hp2 others(16): Show HG00597.hp1 HG00609.hp2 HG02040.hp2 HG02523.hp1 NA18940.hp1 NA18954.hp2 NA18970.hp2 NA18971.hp1 NA18973.hp1 NA18978.hp2 NA18980.hp2 NA18986.hp2 NA18991.hp1 NA19000.hp1 NA19003.hp1 NA19043.hp2 NA19056.hp2 NA19070.hp1 NA19079.hp2	a0001 a0009 a0014 others(1): Show a0001 a0009 a0014 a0017	a0001c0002 a0009c0021 a0014c0017 others(1): Show a0001c0002 a0009c0021 a0014c0017 a0017c0027	a0001c0002t0001 a0001c0002t0003 a0009c0021t0001 others(2): Show a0001c0002t0001 a0001c0002t0003 a0009c0021t0001 a0014c0017t0001 a0017c0027t0001	a0001c0002t0001g0012 a0001c0002t0001g0016 a0001c0002t0001g0041 others(16): Show a0001c0002t0001g0012 a0001c0002t0001g0016 a0001c0002t0001g0041 a0001c0002t0001g0044 a0001c0002t0001g0046 a0001c0002t0001g0051 a0001c0002t0001g0060 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0084 a0001c0002t0001g0087 a0001c0002t0001g0095 a0001c0002t0001g0104 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0003g0045 a0009c0021t0001g0096 a0014c0017t0001g0047 a0017c0027t0001g0210	19	282	0.0674	-22	c.839 others(41): Show c.8395-1022_8395-1001delATATATATATATATATATATAT	FRYL	ENSG00000075539.15	transcript	ENST00000358350.9	protein_coding	59/63			chr4	TogoVar
FRYL_chr4_48492357_48785279	48702455	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0017 a0017	a0017c0027 a0017c0027	a0017c0027t0001 a0017c0027t0001	a0017c0027t0001g0210 a0017c0027t0001g0210	1	282	0.0036	-22	c.-20 others(41): Show c.-204+8042_-204+8063delTTTTTTTTTTTTTTTTTTTTTT	FRYL	ENSG00000075539.15	transcript	ENST00000358350.9	protein_coding	2/63			chr4	TogoVar
FRYL_chr4_48492357_48785279	48761007	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0191 a0001c0011t0001g0191	1	282	0.0036	-22	c.-38 others(43): Show c.-384+19049_-384+19070delCACACACACACACACACACACA	FRYL	ENSG00000075539.15	transcript	ENST00000358350.9	protein_coding	1/63			chr4	TogoVar
FRY_chr13_32026774_32304125	32144944	TGAAGGCA others(15): Show TGAAGGCATCAGGGAGGAACAGA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 NA19030.hp2 HG02257.hp2 NA19030.hp2	a0002 a0009 a0002 a0009	a0002c0003 a0009c0057 a0002c0003 a0009c0057	a0002c0003t0003 a0009c0057t0006 a0002c0003t0003 a0009c0057t0006	a0002c0003t0003g0006 a0009c0057t0006g0232 a0002c0003t0003g0006 a0009c0057t0006g0232	2	236	0.0085	-22	c.118 others(41): Show c.1180-2331_1180-2310delATCAGGGAGGAACAGAGAAGGC	FRY	ENSG00000073910.23	transcript	ENST00000542859.6	protein_coding	11/60		INFO_REALIGN_3_PRIME	chr13	TogoVar
FRY_chr13_32026774_32304125	32251589	TTTACATT others(15): Show TTTACATTGTCTAATAGTTACCC	T T	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02572.hp2 HG03041.hp1 others(1): Show HG01175.hp2 HG02572.hp2 HG03041.hp1 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0015 others(1): Show a0001c0001 a0001c0002 a0001c0015 a0002c0034	a0001c0001t0006 a0001c0002t0006 a0001c0015t0002 others(1): Show a0001c0001t0006 a0001c0002t0006 a0001c0015t0002 a0002c0034t0006	a0001c0001t0006g0063 a0001c0002t0006g0134 a0001c0015t0002g0021 others(1): Show a0001c0001t0006g0063 a0001c0002t0006g0134 a0001c0015t0002g0021 a0002c0034t0006g0025	4	236	0.0170	-22	c.717 others(39): Show c.7171-285_7171-264delCATTGTCTAATAGTTACCCTTA	FRY	ENSG00000073910.23	transcript	ENST00000542859.6	protein_coding	49/60		INFO_REALIGN_3_PRIME	chr13	TogoVar
FSCN3_chr7_127588736_127607144	127594160	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03209.hp2 HG03139.hp2 HG03209.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0036 a0003c0003t0003g0036	2	420	0.0048	-22	c.144 others(37): Show c.144+179_144+200delGTGTGTGTGTGTGTGTGTGTGT	FSCN3	ENSG00000106328.10	transcript	ENST00000265825.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr7	TogoVar
FSHR_chr2_48957157_49159515	49021874	TATATATA others(15): Show TATATATATATATAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0330 a0002c0002t0001g0330	1	350	0.0029	-22	c.225 others(39): Show c.225-1736_225-1715delCTCTCTCTCTATATATATATAT	FSHR	ENSG00000170820.12	transcript	ENST00000406846.7	protein_coding	2/9			chr2	TogoVar
FSHR_chr2_48957157_49159515	49021876	TATATATA others(15): Show TATATATATATAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00642.hp2 HG01167.hp2 others(11): Show HG00423.hp2 HG00642.hp2 HG01167.hp2 HG01169.hp1 HG01928.hp1 HG01978.hp1 HG02027.hp1 HG03831.hp1 NA18954.hp1 NA18990.hp2 NA19005.hp1 NA19060.hp1 NA19062.hp1 NA19068.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0001c0001t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0308 others(11): Show a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0308 a0001c0001t0001g0310 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0342 a0001c0001t0001g0344 a0001c0001t0001g0348 a0001c0001t0002g0076 a0002c0002t0001g0299 a0002c0002t0001g0312	14	350	0.0400	-22	c.225 others(39): Show c.225-1738_225-1717delCTCTCTCTCTCTATATATATAT	FSHR	ENSG00000170820.12	transcript	ENST00000406846.7	protein_coding	2/9			chr2	TogoVar
FSHR_chr2_48957157_49159515	49021878	TATATATA others(15): Show TATATATATAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02040.hp2 NA18747.hp2 NA18975.hp1 HG02040.hp2 NA18747.hp2 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0002g0096 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0002g0096	3	350	0.0086	-22	c.225 others(39): Show c.225-1740_225-1719delCTCTCTCTCTCTCTATATATAT	FSHR	ENSG00000170820.12	transcript	ENST00000406846.7	protein_coding	2/9			chr2	TogoVar
FSHR_chr2_48957157_49159515	49056445	AATATATA others(15): Show AATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02615.hp1 HG02896.hp2 others(5): Show HG02109.hp2 HG02615.hp1 HG02896.hp2 HG02897.hp2 HG03453.hp1 HG03471.hp1 HG03579.hp1 NA19043.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0003 a0001c0001t0001 a0003c0003t0003	a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0140 others(5): Show a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0003c0003t0003g0176	8	350	0.0229	-22	c.224 others(41): Show c.224+11752_224+11773delATATATATATATATATATATAT	FSHR	ENSG00000170820.12	transcript	ENST00000406846.7	protein_coding	2/9			chr2	TogoVar
FSIP1_chr15_39595031_39787841	39696870	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00639.hp1 HG00735.hp1 others(29): Show HG00544.hp2 HG00639.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01168.hp1 HG01243.hp1 HG01433.hp2 HG01975.hp1 HG02027.hp2 HG02055.hp1 HG02109.hp2 HG02647.hp2 HG02976.hp2 HG03041.hp2 HG03710.hp1 NA18522.hp1 NA18906.hp1 NA18951.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA19002.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19011.hp1 NA19064.hp1 NA19087.hp2 NA20129.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0001 a0002c0002t0001 a0003c0003t0002 others(3): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0002 a0003c0003t0003 a0004c0004t0002 a0004c0004t0006	a0001c0001t0001g0065 a0001c0001t0001g0165 a0002c0002t0001g0011 others(29): Show a0001c0001t0001g0065 a0001c0001t0001g0165 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0026 a0002c0002t0001g0042 a0002c0002t0001g0043 a0002c0002t0001g0044 a0002c0002t0001g0047 a0002c0002t0001g0048 a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0064 a0002c0002t0001g0067 a0002c0002t0001g0068 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0075 a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0001g0144 a0002c0002t0001g0158 a0003c0003t0002g0010 a0003c0003t0002g0066 a0003c0003t0003g0095 a0004c0004t0002g0130 a0004c0004t0006g0008 a0004c0004t0006g0009	32	254	0.1260	-22	c.118 others(43): Show c.1188+16552_1188+16573delCACACACACACACACACACACA	FSIP1	ENSG00000150667.8	transcript	ENST00000350221.4	protein_coding	10/11			chr15	TogoVar
FSTL1_chr3_120387293_120455992	120412036	GACACACA others(15): Show GACACACACACACACATACATGC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00323.hp2 others(27): Show HG00099.hp1 HG00280.hp1 HG00323.hp2 HG00735.hp1 HG00738.hp1 HG01106.hp1 HG01109.hp2 HG01192.hp1 HG01243.hp1 HG01346.hp2 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01981.hp1 HG02145.hp1 HG02148.hp2 HG02451.hp2 HG02572.hp1 HG03041.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03831.hp2 HG03942.hp2 HG04115.hp2 NA18978.hp2 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0026	a0001c0001t0002g0243 a0001c0001t0004g0056 a0001c0001t0005g0001 others(23): Show a0001c0001t0002g0243 a0001c0001t0004g0056 a0001c0001t0005g0001 a0001c0001t0005g0011 a0001c0001t0005g0019 a0001c0001t0005g0021 a0001c0001t0005g0092 a0001c0001t0005g0115 a0001c0001t0005g0125 a0001c0001t0005g0126 a0001c0001t0005g0141 a0001c0001t0005g0159 a0001c0001t0005g0180 a0001c0001t0005g0181 a0001c0001t0005g0182 a0001c0001t0005g0183 a0001c0001t0005g0207 a0001c0001t0005g0212 a0001c0001t0005g0217 a0001c0001t0005g0230 a0001c0001t0005g0235 a0001c0001t0005g0258 a0001c0001t0005g0276 a0001c0001t0005g0277 a0001c0001t0005g0289 a0001c0001t0026g0184	30	332	0.0904	-22	c.169 others(35): Show c.169-75_169-54delGCATGTATGTGTGTGTGTGTGT	FSTL1	ENSG00000163430.13	transcript	ENST00000295633.8	protein_coding	3/10			chr3	TogoVar
FSTL1_chr3_120387293_120455992	120412816	ATGTGCGC others(15): Show ATGTGCGCGCGCGCGCGCGCGCG	A A	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0043 a0001c0001t0002g0043	1	332	0.0030	-22	c.169 others(37): Show c.169-855_169-834delCGCGCGCGCGCGCGCGCGCACA	FSTL1	ENSG00000163430.13	transcript	ENST00000295633.8	protein_coding	3/10			chr3	TogoVar
FSTL4_chr5_133191455_133617541	133221891	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp2 HG02486.hp1 others(13): Show HG01884.hp1 HG01891.hp2 HG02486.hp1 HG02615.hp1 HG02896.hp1 HG02922.hp1 HG02922.hp2 HG03098.hp1 HG03195.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 NA19043.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0006t0001	a0001c0001t0001g0052 a0001c0001t0001g0146 a0001c0001t0001g0159 others(13): Show a0001c0001t0001g0052 a0001c0001t0001g0146 a0001c0001t0001g0159 a0001c0001t0003g0011 a0001c0001t0003g0013 a0001c0001t0003g0014 a0001c0001t0003g0019 a0001c0001t0003g0057 a0001c0001t0003g0059 a0001c0001t0003g0113 a0001c0001t0003g0155 a0001c0001t0003g0164 a0001c0001t0006g0015 a0001c0001t0006g0099 a0001c0001t0010g0157 a0001c0006t0001g0053	16	176	0.0909	-22	c.134 others(41): Show c.1340-1047_1340-1026delAAAAAAAAAAAAAAAAAAAAAA	FSTL4	ENSG00000053108.18	transcript	ENST00000265342.12	protein_coding	11/15			chr5	TogoVar
FSTL5_chr4_161378897_162169000	161705950	GTGTATAT others(15): Show GTGTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03017.hp2 NA19002.hp2 NA19065.hp1 HG03017.hp2 NA19002.hp2 NA19065.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0008 a0001c0001t0003 a0001c0002t0008	a0001c0001t0003g0108 a0001c0002t0008g0106 a0001c0002t0008g0120 a0001c0001t0003g0108 a0001c0002t0008g0106 a0001c0002t0008g0120	3	142	0.0211	-22	c.728 others(41): Show c.728-49478_728-49457delTATATATATATATATATATACA	FSTL5	ENSG00000168843.14	transcript	ENST00000306100.10	protein_coding	6/15			chr4	TogoVar
FSTL5_chr4_161378897_162169000	161992952	CTATATAT others(15): Show CTATATATATATGTGTGTATATA	C C	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	142	0.0070	-22	c.160 others(41): Show c.160+40651_160+40672delTATATACACACATATATATATA	FSTL5	ENSG00000168843.14	transcript	ENST00000306100.10	protein_coding	3/15			chr4	TogoVar
FSTL5_chr4_161378897_162169000	162166697	CATATATA others(15): Show CATATATATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 NA19043.hp2 HG02258.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0014 a0001c0003t0013 a0001c0001t0014 a0001c0003t0013	a0001c0001t0014g0101 a0001c0003t0013g0102 a0001c0001t0014g0101 a0001c0003t0013g0102	2	142	0.0141	-22	c.-31 others(33): Show c.-3121_-3100delATATATATATATATATATATAT	FSTL5	ENSG00000168843.14	transcript	ENST00000306100.10	protein_coding		2698		chr4	TogoVar
FTHL17_chrX_31066233_31077041	31067214	GATATACA others(15): Show GATATACACACATATACACACGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	336	0.0030	-22	c.41 others(33): Show c.4166_*4187delACGTGTGTATATGTGTGTATAT	FTHL17	ENSG00000132446.7	transcript	ENST00000359202.5	protein_coding		4018		chrX	TogoVar

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