Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CSMD1_chr8_2930361_4999914	3817252	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02723.hp1 HG02922.hp2 others(4): Show HG02572.hp2 HG02723.hp1 HG02922.hp2 HG03098.hp1 HG03130.hp2 HG03516.hp1 NA19240.hp1	a0001 a0003 a0007 others(3): Show a0001 a0003 a0007 a0018 a0024 a0031	a0001c0002 a0001c0085 a0003c0014 others(4): Show a0001c0002 a0001c0085 a0003c0014 a0007c0029 a0018c0044 a0024c0038 a0031c0069	a0001c0002t0028 a0001c0085t0020 a0003c0014t0055 others(4): Show a0001c0002t0028 a0001c0085t0020 a0003c0014t0055 a0007c0029t0011 a0018c0044t0064 a0024c0038t0075 a0031c0069t0043	a0001c0002t0028g0005 a0001c0085t0020g0060 a0003c0014t0055g0056 others(4): Show a0001c0002t0028g0005 a0001c0085t0020g0060 a0003c0014t0055g0056 a0007c0029t0011g0054 a0018c0044t0064g0085 a0024c0038t0075g0067 a0031c0069t0043g0100	7	126	0.0556	-23	c.819 others(42): Show c.819-63233_819-63211delAAAAAAAAAAAAAAAAAAAAAAA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	5/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4236026	GTTTTTTT others(16): Show GTTTTTTTTGTTTGTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 NA19090.hp1 HG02723.hp2 NA19090.hp1	a0001 a0005 a0001 a0005	a0001c0102 a0005c0065 a0001c0102 a0005c0065	a0001c0102t0005 a0005c0065t0023 a0001c0102t0005 a0005c0065t0023	a0001c0102t0005g0034 a0005c0065t0023g0050 a0001c0102t0005g0034 a0005c0065t0023g0050	2	126	0.0159	-23	c.415 others(44): Show c.415+183904_415+183926delAAAAAAAAAACAAACAAAAAAAA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	3/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4707886	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02922.hp1 HG02615.hp1 HG02922.hp1	a0015 a0026 a0015 a0026	a0015c0062 a0026c0082 a0015c0062 a0026c0082	a0015c0062t0056 a0026c0082t0052 a0015c0062t0056 a0026c0082t0052	a0015c0062t0056g0062 a0026c0082t0052g0097 a0015c0062t0056g0062 a0026c0082t0052g0097	2	126	0.0159	-23	c.86- others(40): Show c.86-70351_86-70329delTTTTTTTTTTTTTTTTTTTTTTT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4727945	TATATATA others(16): Show TATATATATGTATATATATACAAA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02258.hp2 HG02451.hp1 others(10): Show HG01243.hp1 HG02258.hp2 HG02451.hp1 HG02965.hp2 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 NA18522.hp2 NA18906.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0008 a0009 a0017 a0038	a0001c0017 a0001c0025 a0001c0115 others(10): Show a0001c0017 a0001c0025 a0001c0115 a0002c0015 a0002c0051 a0002c0054 a0002c0072 a0003c0014 a0005c0064 a0008c0067 a0009c0113 a0017c0106 a0038c0066	a0001c0017t0005 a0001c0025t0003 a0001c0115t0042 others(10): Show a0001c0017t0005 a0001c0025t0003 a0001c0115t0042 a0002c0015t0021 a0002c0051t0006 a0002c0054t0079 a0002c0072t0003 a0003c0014t0055 a0005c0064t0051 a0008c0067t0059 a0009c0113t0011 a0017c0106t0012 a0038c0066t0010	a0001c0017t0005g0003 a0001c0025t0003g0077 a0001c0115t0042g0055 others(10): Show a0001c0017t0005g0003 a0001c0025t0003g0077 a0001c0115t0042g0055 a0002c0015t0021g0008 a0002c0051t0006g0081 a0002c0054t0079g0096 a0002c0072t0003g0066 a0003c0014t0055g0056 a0005c0064t0051g0078 a0008c0067t0059g0079 a0009c0113t0011g0043 a0017c0106t0012g0042 a0038c0066t0010g0032	13	126	0.1032	-23	c.86- others(40): Show c.86-90410_86-90388delTTTGTATATATATACATATATAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4742000	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp1 HG01123.hp1 others(18): Show HG00423.hp1 HG00438.hp1 HG01123.hp1 HG01243.hp1 HG01243.hp2 HG01884.hp2 HG02056.hp1 HG02074.hp1 HG02129.hp1 HG02280.hp2 HG02451.hp2 HG02965.hp1 HG03195.hp2 HG03516.hp1 HG03540.hp1 HG03834.hp1 NA18971.hp2 NA18979.hp2 NA19043.hp2 NA19074.hp1 NA20129.hp2	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0008 a0013 a0023 a0025 a0029 a0030 a0035	a0001c0002 a0001c0050 a0001c0079 others(18): Show a0001c0002 a0001c0050 a0001c0079 a0001c0080 a0001c0094 a0001c0103 a0001c0111 a0002c0015 a0002c0022 a0002c0076 a0003c0014 a0003c0034 a0004c0087 a0005c0064 a0008c0008 a0013c0027 a0023c0095 a0025c0096 a0029c0028 a0030c0052 a0035c0098	a0001c0002t0002 a0001c0050t0053 a0001c0079t0072 others(18): Show a0001c0002t0002 a0001c0050t0053 a0001c0079t0072 a0001c0080t0040 a0001c0094t0002 a0001c0103t0033 a0001c0111t0045 a0002c0015t0021 a0002c0022t0036 a0002c0076t0035 a0003c0014t0055 a0003c0034t0030 a0004c0087t0001 a0005c0064t0051 a0008c0008t0082 a0013c0027t0003 a0023c0095t0002 a0025c0096t0067 a0029c0028t0024 a0030c0052t0049 a0035c0098t0025	a0001c0002t0002g0083 a0001c0050t0053g0120 a0001c0079t0072g0113 others(18): Show a0001c0002t0002g0083 a0001c0050t0053g0120 a0001c0079t0072g0113 a0001c0080t0040g0025 a0001c0094t0002g0110 a0001c0103t0033g0028 a0001c0111t0045g0063 a0002c0015t0021g0008 a0002c0022t0036g0048 a0002c0076t0035g0014 a0003c0014t0055g0056 a0003c0034t0030g0038 a0004c0087t0001g0022 a0005c0064t0051g0078 a0008c0008t0082g0126 a0013c0027t0003g0099 a0023c0095t0002g0124 a0025c0096t0067g0116 a0029c0028t0024g0040 a0030c0052t0049g0098 a0035c0098t0025g0019	21	126	0.1667	-23	c.86- others(42): Show c.86-104465_86-104443delAAAAAAAAAAAAAAAAAAAAAAA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD2_chr1_33508998_34170230	33510140	AGAGAGGG others(16): Show AGAGAGGGAGAGGGAGACCGTGGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG03209.hp2 HG01192.hp1 HG03209.hp2	a0002 a0019 a0002 a0019	a0002c0005 a0019c0030 a0002c0005 a0019c0030	a0002c0005t0003 a0019c0030t0003 a0002c0005t0003 a0019c0030t0003	a0002c0005t0003g0056 a0019c0030t0003g0020 a0002c0005t0003g0056 a0019c0030t0003g0020	2	66	0.0303	-23	c.64 others(34): Show c.6461_*6483delCCCACGGTCTCCCTCTCCCTCTC	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding		3857		chr1	TogoVar
CSMD2_chr1_33508998_34170230	33790689	ATCTATCT others(16): Show ATCTATCTATCTATCATCTATCTG	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0004 a0002c0006t0004	a0002c0006t0004g0052 a0002c0006t0004g0052	1	66	0.0152	-23	c.155 others(42): Show c.1550+1711_1550+1733delCAGATAGATGATAGATAGATAGA	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	11/70			chr1	TogoVar
CSMD2_chr1_33508998_34170230	34044524	TCATGAGG others(16): Show TCATGAGGCTGTTGCTATGTCAGC	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01243.hp1 HG01978.hp1 others(1): Show HG01109.hp2 HG01243.hp1 HG01978.hp1 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0046 a0002c0006 a0001c0001 a0001c0046 a0002c0006	a0001c0001t0003 a0001c0001t0005 a0001c0046t0002 others(1): Show a0001c0001t0003 a0001c0001t0005 a0001c0046t0002 a0002c0006t0004	a0001c0001t0003g0063 a0001c0001t0005g0055 a0001c0046t0002g0050 others(1): Show a0001c0001t0003g0063 a0001c0001t0005g0055 a0001c0046t0002g0050 a0002c0006t0004g0052	4	66	0.0606	-23	c.405 others(42): Show c.405-11841_405-11819delGCTGACATAGCAACAGCCTCATG	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	2/70			chr1	TogoVar
CSNK1G1_chr15_64160525_64361173	64277599	ATAATATA others(16): Show ATAATATATTAATATTGGTATATT	A A	intron_variant intron_variant	MODIFIER	HG02970.hp2 NA20129.hp1 NA20752.hp1 HG02970.hp2 NA20129.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0029 a0001c0001t0013 a0001c0001t0029	a0001c0001t0013g0143 a0001c0001t0013g0144 a0001c0001t0029g0127 a0001c0001t0013g0143 a0001c0001t0013g0144 a0001c0001t0029g0127	3	176	0.0171	-23	c.182 others(42): Show c.182-18381_182-18359delAATATACCAATATTAATATATTA	CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding	2/11			chr15	TogoVar
CSNK2A1_chr20_467498_548790	485066	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02622.hp2 HG01081.hp1 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0060 a0001c0001t0035 a0001c0001t0060	a0001c0001t0035g0313 a0001c0001t0060g0183 a0001c0001t0035g0313 a0001c0001t0060g0183	2	316	0.0063	-23	c.106 others(41): Show c.1061-1013_1061-991delTTTTTTTTTTTTTTTTTTTTTTT	CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13			chr20	TogoVar
CSNK2A1_chr20_467498_548790	485090	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01255.hp1 HG03688.hp1 others(2): Show HG01106.hp2 HG01255.hp1 HG03688.hp1 HG03704.hp1 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0304 a0001c0001t0010g0305 a0001c0001t0010g0306 others(2): Show a0001c0001t0010g0304 a0001c0001t0010g0305 a0001c0001t0010g0306 a0001c0001t0010g0307 a0001c0001t0010g0309	5	316	0.0158	-23	c.106 others(42): Show c.1061-1037_1061-1015delATATTTTTTTTTTTTTTTTTTTT	CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	13/13			chr20	TogoVar
CSPP1_chr8_67059392_67201614	67190252	TAAACAAC others(16): Show TAAACAACTTAAACATGGCACAGC	T T	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	158	0.0063	-23	c.322 others(40): Show c.3221-396_3221-374delAACAACTTAAACATGGCACAGCA	CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	28/30		INFO_REALIGN_3_PRIME	chr8	TogoVar
CSRNP3_chr2_165464698_165694407	165520770	TTATATAT others(16): Show TTATATATATATATTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02818.hp1 HG02818.hp2 others(6): Show HG01106.hp2 HG02818.hp1 HG02818.hp2 HG03130.hp2 HG03195.hp1 HG03471.hp2 HG03669.hp1 NA18906.hp2 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 others(4): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0001c0001t0025 a0001c0002t0005 a0001c0002t0006	a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0065 others(6): Show a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0065 a0001c0001t0004g0025 a0001c0001t0007g0048 a0001c0001t0011g0051 a0001c0001t0025g0204 a0001c0002t0005g0036 a0001c0002t0006g0040	9	246	0.0366	-23	c.-24 others(40): Show c.-24+2823_-24+2845delTATATATATATATATATATATAT	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CSTF3_chr11_33079584_33166480	33160572	TCTGAATA others(16): Show TCTGAATACAAAGAGCAAAAGAAA	T T	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0026 a0001c0001t0002g0026	1	360	0.0028	-23	c.27+ others(36): Show c.27+704_27+726delTTTCTTTTGCTCTTTGTATTCAG	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding	1/20			chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163907	ATATATAT others(16): Show ATATATATATATATATATATTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG02280.hp1 HG01891.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0229 a0001c0001t0001g0230	2	360	0.0056	-23	c.-26 others(34): Show c.-2605_-2583delAAAAATATATATATATATATATA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2428		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163909	ATATATAT others(16): Show ATATATATATATATATATTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0231	1	360	0.0028	-23	c.-26 others(34): Show c.-2607_-2585delAAAAAAATATATATATATATATA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2430		chr11	TogoVar
CSTF3_chr11_33079584_33166480	33163921	ATATATTT others(16): Show ATATATTTTTTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp2 NA18986.hp1 NA18965.hp2 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	2	360	0.0056	-23	c.-26 others(34): Show c.-2619_-2597delAAAAAAAAAAAAAAAAAAATATA	CSTF3	ENSG00000176102.13	transcript	ENST00000323959.9	protein_coding		2442		chr11	TogoVar
CS_chr12_56266699_56305330	56299774	CCCTCCAC others(16): Show CCCTCCACCAAACTGACTGTAACT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0265	1	316	0.0032	-23	c.42+ others(36): Show c.42+363_42+385delAGTTACAGTCAGTTTGGTGGAGG	CS	ENSG00000062485.19	transcript	ENST00000351328.8	protein_coding	1/10			chr12	TogoVar
CTBP2_chr10_124979317_125033071	125032076	CTCTTGCA others(16): Show CTCTTGCACTGCCCATTTTGAAAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02886.hp2 HG02647.hp1 HG02886.hp2	a0004 a0004	a0004c0003 a0004c0034 a0004c0003 a0004c0034	a0004c0003t0086 a0004c0034t0103 a0004c0003t0086 a0004c0034t0103	a0004c0003t0086g0277 a0004c0034t0103g0296 a0004c0003t0086g0277 a0004c0034t0103g0296	2	380	0.0053	-23	c.-43 others(34): Show c.-4340_-4318delCTTTCAAAATGGGCAGTGCAAGA	CTBP2	ENSG00000175029.17	transcript	ENST00000309035.11	protein_coding		4006		chr10	TogoVar
CTCFL_chr20_57492166_57530140	57503648	AGGGACCC others(16): Show AGGGACCCCTCTCAGGGGCCTGTG	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01884.hp1 HG02055.hp1 others(9): Show HG01261.hp1 HG01884.hp1 HG02055.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG03098.hp1 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG06807.hp1 NA19030.hp1	a0001 a0005 a0009 others(1): Show a0001 a0005 a0009 a0011	a0001c0001 a0001c0004 a0005c0012 others(2): Show a0001c0001 a0001c0004 a0005c0012 a0009c0014 a0011c0027	a0001c0001t0001 a0001c0001t0010 a0001c0004t0003 others(5): Show a0001c0001t0001 a0001c0001t0010 a0001c0004t0003 a0001c0004t0004 a0001c0004t0010 a0005c0012t0003 a0009c0014t0004 a0011c0027t0004	a0001c0001t0001g0228 a0001c0001t0010g0333 a0001c0004t0003g0229 others(9): Show a0001c0001t0001g0228 a0001c0001t0010g0333 a0001c0004t0003g0229 a0001c0004t0004g0233 a0001c0004t0004g0239 a0001c0004t0004g0241 a0001c0004t0004g0270 a0001c0004t0010g0226 a0005c0012t0003g0232 a0009c0014t0004g0268 a0009c0014t0004g0269 a0011c0027t0004g0149	12	424	0.0283	-23	c.167 others(38): Show c.1675-70_1675-48delCACAGGCCCCTGAGAGGGGTCCC	CTCFL	ENSG00000124092.13	transcript	ENST00000243914.8	protein_coding	9/10			chr20	TogoVar
CTDSP2_chr12_57814927_57851729	57845202	CGCCCCAG others(16): Show CGCCCCAGCCTCCGGGGCCAGGTG	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02451.hp1 HG02559.hp2 others(7): Show HG01891.hp2 HG02451.hp1 HG02559.hp2 HG02809.hp1 HG02965.hp2 HG03041.hp2 HG03540.hp1 HG03579.hp2 HG06807.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0016 a0001c0001t0002 a0001c0001t0016	a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 others(4): Show a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0016g0200	10	346	0.0289	-23	c.64+ others(38): Show c.64+1147_64+1169delCACCTGGCCCCGGAGGCTGGGGC	CTDSP2	ENSG00000175215.11	transcript	ENST00000398073.7	protein_coding	1/7			chr12	TogoVar
CTH_chr1_70406268_70444851	70443047	GAAACCTT others(16): Show GAAACCTTAATACTATTAAGATGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp2 HG02040.hp2 HG02083.hp1 others(7): Show HG02027.hp2 HG02040.hp2 HG02083.hp1 NA18944.hp2 NA18982.hp1 NA18991.hp1 NA19055.hp1 NA19077.hp1 NA19086.hp1 NA19087.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0035 a0002c0002t0002g0112 a0002c0002t0002g0145 others(6): Show a0002c0002t0002g0035 a0002c0002t0002g0112 a0002c0002t0002g0145 a0002c0002t0002g0159 a0002c0002t0002g0164 a0002c0002t0002g0165 a0002c0002t0002g0170 a0002c0002t0002g0173 a0002c0002t0002g0243	10	424	0.0236	-23	c.39 others(34): Show c.3921_*3943delAAACCTTAATACTATTAAGATGT	CTH	ENSG00000116761.12	transcript	ENST00000370938.8	protein_coding		3197		chr1	TogoVar
CTH_chr1_70406268_70444851	70443051	CCTTAATA others(16): Show CCTTAATACTATTAAGATGTAAAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(231): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02055.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02735.hp1 HG02809.hp1 HG02818.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03704.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp2 NA18945.hp2 NA18947.hp1 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18977.hp2 NA18978.hp1 NA18980.hp2 NA18981.hp1 NA18983.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp2 NA18994.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp2 NA19054.hp2 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19062.hp1 NA19063.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp2 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19089.hp2 NA19090.hp2 NA19091.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0003c0007 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0003t0003 a0002c0002t0002 a0002c0002t0003 a0002c0002t0010 a0003c0007t0001 a0004c0006t0001	a0001c0001t0001g0003 a0001c0001t0001g0031 a0001c0001t0001g0038 others(155): Show a0001c0001t0001g0003 a0001c0001t0001g0031 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0055 a0001c0001t0001g0067 a0001c0001t0001g0124 a0001c0001t0001g0130 a0001c0001t0001g0138 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0002g0090 a0001c0001t0002g0199 a0001c0001t0002g0213 a0001c0001t0003g0005 a0001c0001t0003g0007 a0001c0001t0003g0009 a0001c0001t0003g0012 a0001c0001t0003g0013 a0001c0001t0003g0016 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0032 a0001c0001t0003g0097 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0107 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0125 a0001c0001t0003g0128 a0001c0001t0003g0129 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0187 a0001c0001t0003g0195 a0001c0001t0003g0235 a0001c0001t0003g0265 a0001c0001t0003g0280 a0001c0001t0003g0281 a0001c0001t0004g0006 a0001c0001t0004g0181 a0001c0001t0004g0182 a0001c0001t0004g0183 a0001c0001t0004g0184 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0189 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0193 a0001c0001t0004g0196 a0001c0001t0004g0229 a0001c0001t0004g0230 a0001c0001t0004g0231 a0001c0001t0005g0048 a0001c0001t0005g0049 a0001c0001t0005g0275 a0001c0001t0005g0276 a0001c0001t0005g0277 a0001c0001t0005g0278 a0001c0001t0005g0279 a0001c0001t0006g0274 a0001c0001t0007g0009 a0001c0001t0007g0123 a0001c0001t0008g0177 a0001c0001t0009g0005 a0001c0001t0011g0126 a0001c0003t0003g0013 a0002c0002t0002g0002 a0002c0002t0002g0006 a0002c0002t0002g0007 a0002c0002t0002g0014 a0002c0002t0002g0017 a0002c0002t0002g0022 a0002c0002t0002g0023 a0002c0002t0002g0030 a0002c0002t0002g0033 a0002c0002t0002g0034 a0002c0002t0002g0036 a0002c0002t0002g0064 a0002c0002t0002g0089 a0002c0002t0002g0106 a0002c0002t0002g0109 a0002c0002t0002g0110 a0002c0002t0002g0111 a0002c0002t0002g0119 a0002c0002t0002g0135 a0002c0002t0002g0136 a0002c0002t0002g0137 a0002c0002t0002g0140 a0002c0002t0002g0148 a0002c0002t0002g0149 a0002c0002t0002g0150 a0002c0002t0002g0151 a0002c0002t0002g0152 a0002c0002t0002g0153 a0002c0002t0002g0154 a0002c0002t0002g0155 a0002c0002t0002g0156 a0002c0002t0002g0158 a0002c0002t0002g0160 a0002c0002t0002g0162 a0002c0002t0002g0163 a0002c0002t0002g0169 a0002c0002t0002g0171 a0002c0002t0002g0176 a0002c0002t0002g0200 a0002c0002t0002g0222 a0002c0002t0002g0223 a0002c0002t0002g0226 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0003g0007 a0002c0002t0010g0166 a0003c0007t0001g0206 a0004c0006t0001g0215	234	424	0.5519	-23	c.39 others(34): Show c.3925_*3947delCTTAATACTATTAAGATGTAAAT	CTH	ENSG00000116761.12	transcript	ENST00000370938.8	protein_coding		3201		chr1	TogoVar
CTH_chr1_70406268_70444851	70443070	TAAATCTT others(16): Show TAAATCTTAATACTATTAAGATGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0245 a0001c0001t0001g0245	1	424	0.0024	-23	c.39 others(34): Show c.3944_*3966delAAATCTTAATACTATTAAGATGC	CTH	ENSG00000116761.12	transcript	ENST00000370938.8	protein_coding		3220		chr1	TogoVar
CTIF_chr18_48534031_48868217	48698104	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02109.hp2 HG02965.hp2 others(3): Show HG01109.hp2 HG02109.hp2 HG02965.hp2 HG03195.hp1 HG03225.hp2 HG03486.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0008 a0001c0001 a0004c0008	a0001c0001t0021 a0001c0001t0023 a0001c0001t0035 others(3): Show a0001c0001t0021 a0001c0001t0023 a0001c0001t0035 a0001c0001t0051 a0001c0001t0052 a0004c0008t0006	a0001c0001t0021g0047 a0001c0001t0023g0051 a0001c0001t0035g0058 others(3): Show a0001c0001t0021g0047 a0001c0001t0023g0051 a0001c0001t0035g0058 a0001c0001t0051g0005 a0001c0001t0052g0126 a0004c0008t0006g0045	6	144	0.0417	-23	c.508 others(42): Show c.508-13500_508-13478delAAAAAAAAAAAAAAAAAAAAAAA	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CTIF_chr18_48534031_48868217	48860975	TGAGCCCC others(16): Show TGAGCCCCCCCGGAAATGATGTCA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0052 a0001c0001t0052	a0001c0001t0052g0126 a0001c0001t0052g0126	1	144	0.0069	-23	c.14 others(34): Show c.1422_*1444delCCCCCGGAAATGATGTCAGAGCC	CTIF	ENSG00000134030.14	transcript	ENST00000256413.8	protein_coding	12/12	1422	INFO_REALIGN_3_PRIME	chr18	TogoVar
CTLA4_chr2_203862771_203878965	203873360	ATATATAT others(16): Show ATATATATATATATATATATATAT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19079.hp2 NA19079.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0032 a0002c0002t0032	a0002c0002t0032g0001 a0002c0002t0032g0001	1	420	0.0024	-23	c.55 others(32): Show c.550_*572delATATATATATATATATATATATT	CTLA4	ENSG00000163599.18	transcript	ENST00000648405.2	protein_coding	4/4	550	INFO_REALIGN_3_PRIME	chr2	TogoVar
CTLA4_chr2_203862771_203878965	203873362	ATATATAT others(16): Show ATATATATATATATATATATATTT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0026 a0002c0002t0026	a0002c0002t0026g0001 a0002c0002t0026g0001	1	420	0.0024	-23	c.55 others(32): Show c.553_*575delTATATATATATATATATATTTTA	CTLA4	ENSG00000163599.18	transcript	ENST00000648405.2	protein_coding	4/4	553	INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79765124	ATGTGCAC others(16): Show ATGTGCACAATGTTTGGTTTGGTT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02622.hp2 HG02965.hp2 others(2): Show HG02145.hp2 HG02622.hp2 HG02965.hp2 HG03130.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0010 others(1): Show a0001c0001 a0001c0004 a0001c0010 a0001c0013	a0001c0001t0001 a0001c0004t0002 a0001c0010t0001 others(1): Show a0001c0001t0001 a0001c0004t0002 a0001c0010t0001 a0001c0013t0001	a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0004t0002g0048 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0004t0002g0048 a0001c0010t0001g0024 a0001c0013t0001g0062	5	68	0.0735	-23	c.298 others(42): Show c.298+20555_298+20577delTTGGTTTGGTTTGTGCACAATGT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA2_chr2_79508051_80653780	79982209	TATATATA others(16): Show TATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0005 a0001c0003t0001g0005	1	68	0.0147	-23	c.105 others(44): Show c.1056+72413_1056+72435delATATATATATATATATATATATA	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18			chr2	TogoVar
CTNNA2_chr2_79508051_80653780	80372255	CTCTCCAC others(16): Show CTCTCCACTATAACCTTTACTCAT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00673.hp2 HG01106.hp2 others(7): Show HG00642.hp2 HG00673.hp2 HG01106.hp2 HG01167.hp1 HG02145.hp2 HG02258.hp2 HG02965.hp2 HG02970.hp2 HG03041.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0010 a0001c0012 a0001c0016	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0005t0002 a0001c0010t0001 a0001c0012t0002 a0001c0016t0001	a0001c0001t0001g0001 a0001c0001t0001g0031 a0001c0001t0002g0066 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0031 a0001c0001t0002g0066 a0001c0002t0001g0035 a0001c0002t0001g0047 a0001c0002t0002g0065 a0001c0005t0002g0009 a0001c0010t0001g0024 a0001c0012t0002g0019 a0001c0016t0001g0045	10	68	0.1471	-23	c.105 others(44): Show c.1057-20954_1057-20932delCTCCACTATAACCTTTACTCATT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNND2_chr5_10966836_11909446	11254410	GAATAATT others(16): Show GAATAATTTAATCATAGGTAGAGC	G G	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03130.hp1 HG02258.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0003g0026 a0001c0002t0001g0013 a0001c0001t0003g0026 a0001c0002t0001g0013	2	26	0.0769	-23	c.162 others(44): Show c.1629-17610_1629-17588delGCTCTACCTATGATTAAATTATT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	9/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11346927	GAAGAAAT others(16): Show GAAGAAATATAGAGAATACTTTCT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG03130.hp2 homoSapiens_chm13v2.hp1 HG00738.hp2 HG03130.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0007 a0001c0001 a0001c0006 a0001c0007	a0001c0001t0001 a0001c0006t0002 a0001c0007t0001 a0001c0001t0001 a0001c0006t0002 a0001c0007t0001	a0001c0001t0001g0017 a0001c0006t0002g0025 a0001c0007t0001g0002 a0001c0001t0001g0017 a0001c0006t0002g0025 a0001c0007t0001g0002	3	26	0.1154	-23	c.137 others(40): Show c.1373-323_1373-301delAGAAAGTATTCTCTATATTTCTT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	8/21			chr5	TogoVar
CTNND2_chr5_10966836_11909446	11817441	GAGAGAGA others(16): Show GAGAGAGAGAGAGAGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	26	0.0385	-23	c.38- others(40): Show c.38-85192_38-85170delTCTCTCTCTCTCTCTCTCTCTCT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	1/21			chr5	TogoVar
CTSD_chr11_1747755_1768927	1768457	AGGGGCAG others(16): Show AGGGGCAGAGATTAAAATGAAGCT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	386	0.0026	-23	c.-46 others(34): Show c.-4621_-4599delAGCTTCATTTTAATCTCTGCCCC	CTSD	ENSG00000117984.15	transcript	ENST00000236671.7	protein_coding		4531		chr11	TogoVar
CTTNBP2NL_chr1_112391214_112466164	112430188	TTTCTTTT others(16): Show TTTCTTTTCTTTTCTTTTCTTTTC	T T	intron_variant intron_variant	MODIFIER	NA19002.hp2 NA19002.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0057 a0001c0002t0002g0057	1	324	0.0031	-23	c.99+ others(40): Show c.99+13927_99+13949delCTTTTCTTTTCTTTTCTTTTCTT	CTTNBP2NL	ENSG00000143079.15	transcript	ENST00000271277.11	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
CUL2_chr10_35003551_35095341	35083210	CCGTCAGA others(16): Show CCGTCAGAAAATAGCAGTTATAAA	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0291 a0001c0003t0005g0291	1	300	0.0033	-23	c.-23 others(40): Show c.-23+6946_-23+6968delTTTATAACTGCTATTTTCTGACG	CUL2	ENSG00000108094.17	transcript	ENST00000374749.8	protein_coding	1/20			chr10	TogoVar
CUL4A_chr13_113204613_113272108	113208233	ACAGCACC others(16): Show ACAGCACCGCCCACAGCGGGCCCT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG02280.hp2 HG02886.hp1 others(5): Show HG01884.hp1 HG02280.hp2 HG02886.hp1 HG03195.hp2 HG03471.hp2 HG03516.hp2 HG03540.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0004 a0001c0003t0007 a0001c0005t0006 others(1): Show a0001c0001t0004 a0001c0003t0007 a0001c0005t0006 a0001c0005t0017	a0001c0001t0004g0358 a0001c0003t0007g0370 a0001c0003t0007g0371 others(5): Show a0001c0001t0004g0358 a0001c0003t0007g0370 a0001c0003t0007g0371 a0001c0003t0007g0372 a0001c0003t0007g0373 a0001c0005t0006g0375 a0001c0005t0006g0376 a0001c0005t0017g0104	8	396	0.0202	-23	c.-13 others(34): Show c.-1394_-1372delCAGCACCGCCCACAGCGGGCCCT	CUL4A	ENSG00000139842.15	transcript	ENST00000375440.9	protein_coding		1379		chr13	TogoVar
CUL4A_chr13_113204613_113272108	113215032	GCTGTGGA others(16): Show GCTGTGGACGTCTTGTCTATGTGA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02886.hp1 HG03471.hp2 HG01884.hp1 HG02886.hp1 HG03471.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0006 a0001c0005t0017 a0001c0005t0006 a0001c0005t0017	a0001c0005t0006g0375 a0001c0005t0006g0376 a0001c0005t0017g0104 a0001c0005t0006g0375 a0001c0005t0006g0376 a0001c0005t0017g0104	3	396	0.0076	-23	c.265 others(40): Show c.265-3905_265-3883delCGTCTTGTCTATGTGACTGTGGA	CUL4A	ENSG00000139842.15	transcript	ENST00000375440.9	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr13	TogoVar
CWC27_chr5_64763930_65023750	64840375	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0086 a0001c0003t0002g0086	1	260	0.0039	-23	c.938 others(42): Show c.938+35991_938+36013delAAAAAAAAAAAAAAAAAAATATA	CWC27	ENSG00000153015.17	transcript	ENST00000381070.8	protein_coding	10/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
CWC27_chr5_64763930_65023750	64840377	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0255 a0001c0003t0001g0255	1	260	0.0039	-23	c.938 others(42): Show c.938+35993_938+36015delAAAAAAAAAAAAAAAAATATATA	CWC27	ENSG00000153015.17	transcript	ENST00000381070.8	protein_coding	10/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
CWC27_chr5_64763930_65023750	64840385	AAAAAAAA others(16): Show AAAAAAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0260 a0001c0005t0002g0260	1	260	0.0039	-23	c.938 others(42): Show c.938+36001_938+36023delAAAAAAAAATATATATATATATA	CWC27	ENSG00000153015.17	transcript	ENST00000381070.8	protein_coding	10/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
CWC27_chr5_64763930_65023750	64840389	AAAAAAAT others(16): Show AAAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0120 a0001c0001t0001g0120	1	260	0.0039	-23	c.938 others(42): Show c.938+36005_938+36027delAAAAATATATATATATATATATA	CWC27	ENSG00000153015.17	transcript	ENST00000381070.8	protein_coding	10/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
CWF19L1_chr10_100227298_100272638	100243380	ACCACATG others(16): Show ACCACATGTTGTATGATTCCATTT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0192 a0001c0001t0001g0192	1	364	0.0028	-23	c.104 others(40): Show c.1044+295_1044+317delAAATGGAATCATACAACATGTGG	CWF19L1	ENSG00000095485.18	transcript	ENST00000354105.10	protein_coding	10/13			chr10	TogoVar
CWF19L2_chr11_107321360_107462825	107460484	TTTATATA others(16): Show TTTATATATATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0094 a0001c0001t0004g0094	1	392	0.0026	-23	c.-26 others(34): Show c.-2691_-2669delTATATATATATATATATATATAA	CWF19L2	ENSG00000152404.16	transcript	ENST00000282251.10	protein_coding		2660		chr11	TogoVar
CX3CR1_chr3_39258496_39285036	39283796	TATATATA others(16): Show TATATATATATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	420	0.0024	-23	c.-38 others(34): Show c.-3875_-3853delTATATATATATATATATATATAT	CX3CR1	ENSG00000168329.14	transcript	ENST00000399220.3	protein_coding		3761		chr3	TogoVar
CXADR_chr21_17508043_17575100	17539325	CCAGCTTT others(16): Show CCAGCTTTAAAACTGTCGCTGGTT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0262 a0001c0001t0022g0262	1	352	0.0028	-23	c.44- others(38): Show c.44-7701_44-7679delCAGCTTTAAAACTGTCGCTGGTT	CXADR	ENSG00000154639.19	transcript	ENST00000284878.12	protein_coding	1/6			chr21	TogoVar
CXCL14_chr5_135565679_135583991	135571742	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00544.hp1 others(107): Show HG00408.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp2 HG00621.hp2 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG01069.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01952.hp2 HG01981.hp1 HG02004.hp1 HG02015.hp1 HG02056.hp1 HG02074.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02486.hp2 HG02602.hp2 HG02622.hp1 HG02630.hp2 HG02698.hp2 HG02922.hp1 HG02970.hp2 HG03195.hp1 HG03225.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03831.hp2 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18747.hp1 NA18906.hp2 NA18940.hp2 NA18946.hp2 NA18948.hp2 NA18953.hp1 NA18954.hp1 NA18963.hp2 NA18966.hp2 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18974.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp2 NA18982.hp2 NA18983.hp1 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19004.hp2 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19054.hp2 NA19057.hp1 NA19060.hp2 NA19065.hp1 NA19066.hp1 NA19075.hp2 NA19086.hp2 NA19087.hp2 NA19088.hp2 NA19089.hp1 NA20805.hp1 NA20805.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0024 a0001c0001t0001 a0001c0001t0024	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0011 others(16): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0028 a0001c0001t0001g0040 a0001c0001t0001g0095 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0024g0031	110	402	0.2736	-23	c.88 others(31): Show c.88_*110delAAAAAAAAAAAAAAAAAAAAAAA	CXCL14	ENSG00000145824.13	transcript	ENST00000512158.6	protein_coding	4/4	88		chr5	TogoVar
CXCL14_chr5_135565679_135583991	135571763	TTTTTTTT others(16): Show TTTTTTTTTTTTTTTTTTTTTTTA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0113 a0001c0001t0030g0113	1	402	0.0025	-23	c.67 others(30): Show c.67_*89delTAAAAAAAAAAAAAAAAAAAAAA	CXCL14	ENSG00000145824.13	transcript	ENST00000512158.6	protein_coding	4/4	67		chr5	TogoVar
CYB5R3_chr22_42612840_42654392	42625207	TGTGTAAC others(16): Show TGTGTAACTTTCTTTTTAGGCCAG	T T	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0183 a0001c0001t0001g0183	1	360	0.0028	-23	c.634 others(40): Show c.634-1342_634-1320delCTGGCCTAAAAAGAAAGTTACAC	CYB5R3	ENSG00000100243.22	transcript	ENST00000352397.10	protein_coding	7/8			chr22	TogoVar

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