Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
HYDIN_chr16_70797084_71235722	70864330	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01074.hp1 HG01192.hp1 others(5): Show HG00738.hp2 HG01074.hp1 HG01192.hp1 HG01515.hp1 HG02258.hp2 HG02735.hp1 NA19240.hp1 NA20129.hp1	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0024	a0001c0001 a0001c0051 a0002c0005 others(2): Show a0001c0001 a0001c0051 a0002c0005 a0010c0018 a0024c0080	a0001c0001t0001 a0001c0051t0002 a0002c0005t0001 others(2): Show a0001c0001t0001 a0001c0051t0002 a0002c0005t0001 a0010c0018t0001 a0024c0080t0001	a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0108 others(5): Show a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0108 a0001c0001t0001g0131 a0001c0051t0002g0001 a0002c0005t0001g0133 a0010c0018t0001g0136 a0024c0080t0001g0102	8	15	0.5333	-23	c.114 others(44): Show c.11472-1171_11472-1149delTTTTTTTTTTTTTTTTTTTTTTT	HYDIN	ENSG00000157423.18	transcript	ENST00000393567.7	protein_coding	67/85			chr16	TogoVar
HYDIN_chr16_70797084_71235722	70904478	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01081.hp2 HG01256.hp2 others(13): Show HG00642.hp1 HG01081.hp2 HG01256.hp2 HG01928.hp1 HG02148.hp2 HG02300.hp1 HG02602.hp1 HG03492.hp2 HG03669.hp2 HG04199.hp1 NA18944.hp1 NA18960.hp2 NA18969.hp2 NA19004.hp2 NA19010.hp1 NA20905.hp2	a0001 a0002 a0029 others(2): Show a0001 a0002 a0029 a0037 a0039	a0001c0001 a0001c0002 a0001c0078 others(4): Show a0001c0001 a0001c0002 a0001c0078 a0002c0003 a0029c0025 a0037c0026 a0039c0030	a0001c0001t0001 a0001c0001t0025 a0001c0001t0028 others(6): Show a0001c0001t0001 a0001c0001t0025 a0001c0001t0028 a0001c0002t0002 a0001c0078t0001 a0002c0003t0002 a0029c0025t0001 a0037c0026t0001 a0039c0030t0001	a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 others(13): Show a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0025g0106 a0001c0001t0028g0077 a0001c0002t0002g0009 a0001c0002t0002g0014 a0001c0002t0002g0016 a0001c0078t0001g0095 a0002c0003t0002g0013 a0029c0025t0001g0060 a0037c0026t0001g0057 a0039c0030t0001g0059	16	47	0.3404	-23	c.851 others(40): Show c.8517-437_8517-415delAAAAAAAAAAAAAAAAAAAAAAA	HYDIN	ENSG00000157423.18	transcript	ENST00000393567.7	protein_coding	50/85			chr16	TogoVar
HYOU1_chr11_119039188_119062205	119050719	CCAAAAAA others(16): Show CCAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0044 a0001c0003t0003g0044	1	10	0.1000	-23	c.166 others(40): Show c.1665+293_1665+315delTTTTTTTTTTTTTTTTTTTTTTG	HYOU1	ENSG00000149428.21	transcript	ENST00000617285.5	protein_coding	14/25			chr11	TogoVar
IDE_chr10_92446684_92579093	92564671	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	15	0.0667	-23	c.98+ others(38): Show c.98+9228_98+9250delTTTTTTTTTTTTTTTTTTTTTTT	IDE	ENSG00000119912.18	transcript	ENST00000265986.11	protein_coding	1/24			chr10	TogoVar
IDNK_chr9_83618143_83649123	83648785	ATTCGTAC others(16): Show ATTCGTACTTTTTTTTTTTTTTTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0118	1	330	0.0030	-23	c.50 others(34): Show c.5006_*5028delTTCGTACTTTTTTTTTTTTTTTG	IDNK	ENSG00000148057.16	transcript	ENST00000376419.5	protein_coding		4663		chr9	TogoVar
IFFO2_chr1_18899280_18961676	18951603	TCTACCAG others(16): Show TCTACCAGCCCAGGGCAACTTCCC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	374	0.0027	-23	c.665 others(40): Show c.665+4042_665+4064delGGGAAGTTGCCCTGGGCTGGTAG	IFFO2	ENSG00000169991.11	transcript	ENST00000455833.7	protein_coding	1/8			chr1	TogoVar
IFI44L_chr1_78615448_78651145	78643629	TGTTTTGT others(16): Show TGTTTTGTTTTTTTTTTGTTGTTG	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0103 a0002c0002t0103	a0002c0002t0103g0012 a0002c0002t0103g0012	1	428	0.0023	-23	c.18 others(34): Show c.1821_*1843delGTTTTGTTTTTTTTTTGTTGTTG	IFI44L	ENSG00000137959.17	transcript	ENST00000370751.10	protein_coding	9/9	1821		chr1	TogoVar
IFIH1_chr2_162262074_162323684	162314433	TTTCTTTC others(16): Show TTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	NA18974.hp2 NA18982.hp1 NA19003.hp2 NA18974.hp2 NA18982.hp1 NA19003.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0056 a0001c0003t0001g0166 a0001c0003t0001g0167 a0001c0003t0001g0056 a0001c0003t0001g0166 a0001c0003t0001g0167	3	215	0.0140	-23	c.453 others(40): Show c.453+3399_453+3421delGAAAGAAAGAAAGAAAGAAAGAA	IFIH1	ENSG00000115267.10	transcript	ENST00000649979.2	protein_coding	1/15			chr2	TogoVar
IFIH1_chr2_162262074_162323684	162314461	TTTCTTTC others(16): Show TTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0003 a0001c0005t0003	a0001c0005t0003g0182 a0001c0005t0003g0182	1	218	0.0046	-23	c.453 others(40): Show c.453+3371_453+3393delGAAAGAAAGAAAGAAAGAAAGAA	IFIH1	ENSG00000115267.10	transcript	ENST00000649979.2	protein_coding	1/15			chr2	TogoVar
IFIT1_chr10_89387623_89411487	89394591	TATATATA others(16): Show TATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0005 a0001c0002t0002g0005	1	428	0.0023	-23	c.5+1 others(36): Show c.5+1875_5+1897delATATATATATATATATATATATA	IFIT1	ENSG00000185745.10	transcript	ENST00000371804.4	protein_coding	1/1			chr10	TogoVar
IFITM10_chr11_1727406_1755595	1743481	TATGGATG others(16): Show TATGGATGGATGGACAGATGGAGA	T T	intron_variant intron_variant	MODIFIER	NA19086.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0081 a0001c0001t0001g0081	1	404	0.0025	-23	c.537 others(40): Show c.537+4163_537+4185delTCTCCATCTGTCCATCCATCCAT	IFITM10	ENSG00000244242.2	transcript	ENST00000340134.5	protein_coding	2/2			chr11	TogoVar
IFNLR1_chr1_24149168_24192289	24162713	TTCTTTCT others(16): Show TTCTTTCTTTCTTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02155.hp2 HG03453.hp1 others(6): Show HG02027.hp2 HG02155.hp2 HG03453.hp1 HG03834.hp1 NA18949.hp2 NA18963.hp1 NA18964.hp2 NA18992.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0002 a0001c0001t0005 a0001c0001t0017 others(1): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0017 a0001c0006t0008	a0001c0001t0002g0019 a0001c0001t0002g0213 a0001c0001t0002g0216 others(6): Show a0001c0001t0002g0019 a0001c0001t0002g0213 a0001c0001t0002g0216 a0001c0001t0002g0231 a0001c0001t0002g0234 a0001c0001t0002g0246 a0001c0001t0005g0096 a0001c0001t0017g0255 a0001c0006t0008g0146	9	315	0.0286	-23	c.368 others(40): Show c.368-1052_368-1030delGAAAGAAAGAAAAGAAAGAAAGA	IFNLR1	ENSG00000185436.12	transcript	ENST00000327535.6	protein_coding	3/6			chr1	TogoVar
IFRD1_chr7_112445460_112482203	112473035	TGTGTGTG others(16): Show TGTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0002 a0003c0009t0002	a0003c0009t0002g0128 a0003c0009t0002g0128	1	327	0.0031	-23	c.126 others(40): Show c.1266+175_1266+197delGTGTGTGTGTGTGTGTGTGTGTG	IFRD1	ENSG00000006652.15	transcript	ENST00000403825.8	protein_coding	11/11			chr7	TogoVar
IFT122_chr3_129435224_129525507	129516223	ACACACAC others(16): Show ACACACACAGACTGCCCCTGCGTG	A A	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02129.hp1 HG00558.hp2 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0076 a0001c0001t0001g0062 a0001c0001t0001g0076	2	354	0.0056	-23	c.326 others(40): Show c.3265+643_3265+665delGCGTGCACACACAGACTGCCCCT	IFT122	ENSG00000163913.14	transcript	ENST00000348417.7	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
IFT122_chr3_129435224_129525507	129516298	ACACACAC others(16): Show ACACACACACAGAGACTGCCCCTG	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02055.hp2 HG02083.hp1 others(15): Show HG01255.hp1 HG02055.hp2 HG02083.hp1 HG02135.hp1 HG02559.hp2 HG02615.hp2 HG02896.hp2 HG03453.hp1 HG03491.hp1 HG03834.hp1 HG03942.hp1 HG06807.hp2 NA18522.hp1 NA18943.hp1 NA18952.hp1 NA19240.hp1 NA20300.hp1 NA20905.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0004c0006t0001 a0001c0001t0001 a0004c0006t0001	a0001c0001t0001g0002 a0001c0001t0001g0281 a0001c0001t0001g0284 others(13): Show a0001c0001t0001g0002 a0001c0001t0001g0281 a0001c0001t0001g0284 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0004c0006t0001g0285 a0004c0006t0001g0286 a0004c0006t0001g0324	18	354	0.0508	-23	c.326 others(40): Show c.3265+733_3265+755delGAGACTGCCCCTGCACACACACA	IFT122	ENSG00000163913.14	transcript	ENST00000348417.7	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
IFT122_chr3_129435224_129525507	129517146	CCTGCACA others(16): Show CCTGCACACACACGGAGACTGCCT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02809.hp2 NA21309.hp1 HG01884.hp1 HG02809.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113	3	354	0.0085	-23	c.326 others(40): Show c.3266-310_3266-288delGGAGACTGCCTCTGCACACACAC	IFT122	ENSG00000163913.14	transcript	ENST00000348417.7	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
IFT140_chr16_1505427_1617072	1516139	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 NA18961.hp2 NA19079.hp2 HG00423.hp2 NA18961.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0002 a0001c0004t0003 a0001c0001t0002 a0001c0004t0003	a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0004t0003g0081 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0004t0003g0081	3	6	0.5000	-23	c.418 others(42): Show c.4182+2054_4182+2076delTTTTTTTTTTTTTTTTTTTTTTT	IFT140	ENSG00000187535.14	transcript	ENST00000426508.7	protein_coding	30/30			chr16	TogoVar
IFT140_chr16_1505427_1617072	1556731	CTTTTTTA others(16): Show CTTTTTTATGACAAGGAATTTTTA	C C	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0032 a0002c0003t0003g0032	1	329	0.0030	-23	c.239 others(42): Show c.2399+1181_2399+1203delTAAAAATTCCTTGTCATAAAAAA	IFT140	ENSG00000187535.14	transcript	ENST00000426508.7	protein_coding	19/30			chr16	TogoVar
IFT43_chr14_75980763_76088742	75999248	TATATATA others(16): Show TATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02486.hp2 HG03139.hp1 others(1): Show HG01109.hp2 HG02486.hp2 HG03139.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0342 a0001c0001t0001g0343 others(1): Show a0001c0001t0001g0034 a0001c0001t0001g0342 a0001c0001t0001g0343 a0001c0001t0001g0344	4	394	0.0102	-23	c.147 others(42): Show c.147+10272_147+10294delATATATATATATATATATATATA	IFT43	ENSG00000119650.13	transcript	ENST00000314067.11	protein_coding	2/8			chr14	TogoVar
IFT43_chr14_75980763_76088742	75999252	TATATATA others(16): Show TATATATATATATATATATATGTA	T T	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	394	0.0025	-23	c.147 others(42): Show c.147+10276_147+10298delATATATATATATATATATATGTA	IFT43	ENSG00000119650.13	transcript	ENST00000314067.11	protein_coding	2/8			chr14	TogoVar
IFT81_chr12_110119357_110223793	110121713	TTTTTTCT others(16): Show TTTTTTCTTTTTTCTTTTCTTTAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02257.hp1 HG02965.hp2 HG03041.hp1 others(2): Show HG02257.hp1 HG02965.hp2 HG03041.hp1 HG03139.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 others(2): Show a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0161	5	216	0.0231	-23	c.-31 others(34): Show c.-3169_-3147delTTTTTCTTTTTTCTTTTCTTTAC	IFT81	ENSG00000122970.16	transcript	ENST00000242591.10	protein_coding		2643		chr12	TogoVar
IFT81_chr12_110119357_110223793	110124169	TCCCGTCC others(16): Show TCCCGTCCGCCCCGTCCGCCCCGC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp2 HG03098.hp1 HG02886.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0162 a0001c0001t0001g0164	2	215	0.0093	-23	c.-71 others(32): Show c.-713_-691delCCCGTCCGCCCCGTCCGCCCCGC	IFT81	ENSG00000122970.16	transcript	ENST00000242591.10	protein_coding		187		chr12	TogoVar
IGLON5_chr19_51306644_51335891	51313672	TTTCTTTC others(16): Show TTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp2 NA19060.hp1 HG01496.hp2 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0093 a0001c0001t0008g0111 a0001c0001t0001g0093 a0001c0001t0008g0111	2	416	0.0048	-23	c.79+ others(38): Show c.79+1756_79+1778delTCTTTCTTTCTTTCTTCTTTCTT	IGLON5	ENSG00000142549.10	transcript	ENST00000270642.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr19	TogoVar
IL15RA_chr10_5947384_5982543	5958223	TGGAAACA others(16): Show TGGAAACAAACATGGTACAGAAAA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00609.hp2 HG01168.hp1 others(34): Show HG00280.hp1 HG00609.hp2 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01358.hp2 HG01884.hp1 HG01891.hp1 HG01978.hp1 HG01981.hp2 HG02004.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02559.hp2 HG02717.hp1 HG02818.hp1 HG03486.hp1 HG03834.hp2 NA18963.hp1 NA18967.hp2 NA18970.hp1 NA18971.hp1 NA18978.hp1 NA18981.hp1 NA18989.hp2 NA18992.hp1 NA19009.hp2 NA19030.hp1 NA19063.hp1 NA19068.hp2 NA19077.hp2 NA19087.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0003 a0001c0003t0003 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0003t0003 a0001c0003t0004	a0001c0001t0002g0095 a0001c0001t0002g0097 a0001c0001t0002g0107 others(18): Show a0001c0001t0002g0095 a0001c0001t0002g0097 a0001c0001t0002g0107 a0001c0001t0003g0033 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0068 a0001c0001t0003g0087 a0001c0001t0003g0122 a0001c0001t0003g0217 a0001c0001t0003g0222 a0001c0003t0003g0004 a0001c0003t0003g0152 a0001c0003t0003g0153 a0001c0003t0003g0156 a0001c0003t0003g0179 a0001c0003t0003g0182 a0001c0003t0003g0187 a0001c0003t0004g0044 a0001c0003t0004g0159 a0001c0003t0004g0160	37	454	0.0815	-23	c.616 others(40): Show c.616+1508_616+1530delTTTTCTGTACCATGTTTGTTTCC	IL15RA	ENSG00000134470.21	transcript	ENST00000379977.8	protein_coding	5/6			chr10	TogoVar
IL17A_chr6_52181375_52195638	52194302	AATAATAT others(16): Show AATAATATATTTATATATTTTTAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	460	0.0022	-23	c.50 others(34): Show c.5011_*5033delATAATATATTTATATATTTTTAT	IL17A	ENSG00000112115.7	transcript	ENST00000648244.1	protein_coding		3665		chr6	TogoVar
IL1R2_chr2_101986960_102033544	102003811	CTGTGTCT others(16): Show CTGTGTCTGTGTCTGTGTCTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0126	1	217	0.0046	-23	c.-61 others(40): Show c.-61-4703_-61-4681delTGTGTCTGTGTCTGTGTCTGTGT	IL1R2	ENSG00000115590.14	transcript	ENST00000332549.8	protein_coding	1/8			chr2	TogoVar
IL1RAPL1_chrX_28582446_29961718	28737139	TTCCTTCC others(16): Show TTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02622.hp1 NA18953.hp1 HG01109.hp1 HG02622.hp1 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0064 a0001c0001t0001g0119 a0001c0001t0004g0063 a0001c0001t0001g0064 a0001c0001t0001g0119 a0001c0001t0004g0063	3	123	0.0244	-23	c.-24 others(42): Show c.-24-52179_-24-52157delCCTTCCTTCCTTCCTTCCTTCCT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29158940	CTCCCTCC others(16): Show CTCCCTCCCTCTCCCTCTCTCTCT	C C	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	128	0.0078	-23	c.83- others(42): Show c.83-123997_83-123975delTCCCTCCCTCTCCCTCTCTCTCT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	2/10			chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29562087	ATCTGTCT others(16): Show ATCTGTCTATCTATCTATCTATCT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02622.hp1 HG02886.hp1 others(1): Show HG02145.hp1 HG02622.hp1 HG02886.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0109 a0001c0001t0001g0120 a0001c0001t0001g0122 others(1): Show a0001c0001t0001g0109 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0004g0063	4	132	0.0303	-23	c.704 others(44): Show c.704-106342_704-106320delTCTGTCTATCTATCTATCTATCT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	5/10			chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105243582	TATGTGTA others(16): Show TATGTGTATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	141	0.0071	-23	c.543 others(40): Show c.543+9579_543+9601delATGTGTATATATATATATATATA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	4/10			chrX	TogoVar
IL1RL1_chr2_102306563_102357037	102311988	TTATATAT others(16): Show TTATATATAATATATTTATATATA	T T	intron_variant intron_variant	MODIFIER	HG03710.hp1 NA19080.hp2 HG03710.hp1 NA19080.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0115 a0005c0006t0001g0116 a0005c0006t0001g0115 a0005c0006t0001g0116	2	323	0.0062	-23	c.-15 others(40): Show c.-150+367_-150+389delATATATAATATATTTATATATAT	IL1RL1	ENSG00000115602.17	transcript	ENST00000233954.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
IL26_chr12_68196349_68230810	68210338	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00735.hp2 HG01069.hp1 others(25): Show HG00323.hp1 HG00735.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01081.hp1 HG01099.hp1 HG01109.hp1 HG01358.hp1 HG01358.hp2 HG01975.hp1 HG02280.hp2 HG02602.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02922.hp2 HG03041.hp1 HG03130.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 NA18972.hp2 NA18998.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0046 others(16): Show a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0057 a0001c0001t0001g0177 a0001c0001t0001g0199 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0258 a0001c0001t0001g0261 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0266 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0004t0001g0055	28	31	0.9032	-23	c.364 others(40): Show c.364-8278_364-8256delTTTTTTTTTTTTTTTTTTTTTTT	IL26	ENSG00000111536.5	transcript	ENST00000229134.5	protein_coding	3/4			chr12	TogoVar
IL33_chr9_6210807_6262983	6252065	ACCCAACA others(16): Show ACCCAACAAAAAACAAAACAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0180 a0001c0002t0002g0180	1	243	0.0041	-23	c.344 others(38): Show c.344-800_344-778delCCCAACAAAAAACAAAACAAAAC	IL33	ENSG00000137033.12	transcript	ENST00000682010.1	protein_coding	4/7			chr9	TogoVar
IL34_chr16_70641559_70665682	70644741	GAGGAGGA others(16): Show GAGGAGGAGGGAGGAGGGAGGAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG03453.hp2 NA18967.hp1 others(3): Show HG02145.hp1 HG03453.hp2 NA18967.hp1 NA18974.hp2 NA19010.hp1 NA19059.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0043 a0001c0001t0004g0002 a0001c0001t0004g0161 others(1): Show a0001c0001t0002g0043 a0001c0001t0004g0002 a0001c0001t0004g0161 a0001c0001t0004g0168	6	436	0.0138	-23	c.-22 others(34): Show c.-2206_-2184delAGGAGGAGGGAGGAGGGAGGAAA	IL34	ENSG00000157368.12	transcript	ENST00000288098.7	protein_coding		1817		chr16	TogoVar
IL3RA_chrX_1331785_1387689	1353953	CCATCATG others(16): Show CCATCATGGGTCGTGGGACCCCCA	C C	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0101 a0001c0001t0003g0101	1	113	0.0088	-23	c.616 others(40): Show c.616+1449_616+1471delATCATGGGTCGTGGGACCCCCAC	IL3RA	ENSG00000185291.12	transcript	ENST00000331035.10	protein_coding	6/11		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL3RA_chrX_1331785_1387689	1366001	CGGGGTGA others(16): Show CGGGGTGAGCCGGGTGCCCCGGGT	C C	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0060 a0001c0001t0002g0060	1	112	0.0089	-23	c.874 others(38): Show c.874+751_874+773delGGGTGAGCCGGGTGCCCCGGGTG	IL3RA	ENSG00000185291.12	transcript	ENST00000331035.10	protein_coding	9/11		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL4_chr5_132668989_132687678	132680071	TGTCACTA others(16): Show TGTCACTAAAGACACGCAGGCCGA	T T	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	420	0.0024	-23	c.360 others(38): Show c.360+185_360+207delACTAAAGACACGCAGGCCGAGTC	IL4	ENSG00000113520.11	transcript	ENST00000231449.7	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
IL7_chr8_78727772_78810463	78806831	GGGGTGAC others(16): Show GGGGTGACAGAGTAAGAGAGAACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0213 a0001c0001t0011g0213	1	262	0.0038	-23	c.-19 others(34): Show c.-1932_-1910delTGTTCTCTCTTACTCTGTCACCC	IL7	ENSG00000104432.15	transcript	ENST00000263851.9	protein_coding		1369		chr8	TogoVar
IMMP2L_chr7_110657644_111567492	111539192	GAGGGAGA others(16): Show GAGGGAGAAAGAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0058 a0001c0002t0004g0058	1	62	0.0161	-23	c.-2- others(40): Show c.-2-17766_-2-17744delTCTTTCTTTCTTTCTTTCTCCCT	IMMP2L	ENSG00000184903.10	transcript	ENST00000405709.7	protein_coding	1/5			chr7	TogoVar
IMPG1_chr6_75916114_76077662	75974360	TTTCTTTC others(16): Show TTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0014 a0003c0003t0014	a0003c0003t0014g0079 a0003c0003t0014g0079	1	281	0.0036	-23	c.129 others(44): Show c.1292-23289_1292-23267delGAAAGAAAGAAAGAAAGAAAGAA	IMPG1	ENSG00000112706.12	transcript	ENST00000369950.8	protein_coding	12/16			chr6	TogoVar
INAFM1_chr19_47269885_47280723	47274394	CGCGGGAA others(16): Show CGCGGGAACCCGCGCGGGAGGAGA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	392	0.0026	-23	c.-52 others(32): Show c.-525_-503delGCGGGAACCCGCGCGGGAGGAGA	INAFM1	ENSG00000257704.4	transcript	ENST00000552360.4	protein_coding		490		chr19	TogoVar
INAVA_chr1_200889900_200920742	200915008	AAGCTGCC others(16): Show AAGCTGCCTGTGCTAAGACCACCC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01361.hp2 HG01884.hp1 HG01891.hp2 others(11): Show HG01361.hp2 HG01884.hp1 HG01891.hp2 HG02055.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02896.hp1 HG03195.hp2 HG03225.hp2 HG03486.hp1 HG03516.hp2 HG03669.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0008 a0002c0003t0008 a0001c0001t0008 a0002c0003t0008	a0001c0001t0008g0012 a0001c0001t0008g0084 a0001c0001t0008g0087 others(6): Show a0001c0001t0008g0012 a0001c0001t0008g0084 a0001c0001t0008g0087 a0001c0001t0008g0088 a0001c0001t0008g0089 a0001c0001t0008g0133 a0001c0001t0008g0134 a0001c0001t0008g0137 a0002c0003t0008g0030	14	422	0.0332	-23	c.13 others(34): Show c.1385_*1407delCCTGTGCTAAGACCACCCAGCTG	INAVA	ENSG00000163362.11	transcript	ENST00000413687.3	protein_coding	10/10	1385	INFO_REALIGN_3_PRIME	chr1	TogoVar
INIP_chr9_112678926_112723117	112707484	GTTTCTTT others(16): Show GTTTCTTTTTTTTCCTCCCGCACA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0062 a0001c0001t0013g0062	1	370	0.0027	-23	c.25+ others(38): Show c.25+8954_25+8976delTGTGCGGGAGGAAAAAAAAGAAA	INIP	ENSG00000148153.14	transcript	ENST00000374242.9	protein_coding	2/4			chr9	TogoVar
INKA2_chr1_111717064_111744395	111740971	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02257.hp1 HG02559.hp2 others(3): Show HG02145.hp2 HG02257.hp1 HG02559.hp2 HG02723.hp2 HG02922.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0077 a0001c0001t0097 a0001c0001t0027 a0001c0001t0077 a0001c0001t0097	a0001c0001t0027g0044 a0001c0001t0027g0142 a0001c0001t0027g0143 others(2): Show a0001c0001t0027g0044 a0001c0001t0027g0142 a0001c0001t0027g0143 a0001c0001t0077g0100 a0001c0001t0097g0277	6	11	0.5455	-23	c.-17 others(34): Show c.-1752_-1730delTTTTTTTTTTTTTTTTTTTTTTT	INKA2	ENSG00000197852.12	transcript	ENST00000357260.6	protein_coding		1577		chr1	TogoVar
INO80D_chr2_205988721_206091174	206071257	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0286 a0001c0001t0013g0286	1	2	0.5000	-23	c.-12 others(42): Show c.-123-8036_-123-8014delAAAAAAAAAAAAAAAAAAAAAAA	INO80D	ENSG00000114933.16	transcript	ENST00000403263.6	protein_coding	1/10			chr2	TogoVar
INO80_chr15_40973880_41121280	41117538	GTCGAATC others(16): Show GTCGAATCACCTGAGGTCAGGAGC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0219 a0001c0001t0001g0219	1	280	0.0036	-23	c.-16 others(34): Show c.-1632_-1610delGCTCCTGACCTCAGGTGATTCGA	INO80	ENSG00000128908.19	transcript	ENST00000648947.1	protein_coding		1259		chr15	TogoVar
INPP1_chr2_190338589_190376665	190373239	TTTTTTTT others(16): Show TTTTTTTTTTTTTTTTTTGTTTTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0058 a0001c0004t0004g0058	1	408	0.0025	-23	c.18 others(34): Show c.1838_*1860delTTTTTTTTTTTTTTTTTGTTTTG	INPP1	ENSG00000151689.13	transcript	ENST00000392329.7	protein_coding		1575		chr2	TogoVar
INPP4B_chr4_142018160_142851301	142215892	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02809.hp2 HG02970.hp2 HG02622.hp1 HG02809.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0026 a0001c0001t0004 a0001c0001t0005 a0001c0001t0026	a0001c0001t0004g0041 a0001c0001t0005g0084 a0001c0001t0026g0067 a0001c0001t0004g0041 a0001c0001t0005g0084 a0001c0001t0026g0067	3	14	0.2143	-23	c.837 others(40): Show c.837-6889_837-6867delTTTTTTTTTTTTTTTTTTTTTTT	INPP4B	ENSG00000109452.13	transcript	ENST00000262992.9	protein_coding	12/25			chr4	TogoVar
INPP4B_chr4_142018160_142851301	142693483	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00642.hp2 HG00741.hp1 others(28): Show HG00438.hp1 HG00642.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01261.hp1 HG01346.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG02015.hp2 HG02055.hp2 HG02145.hp1 HG02258.hp1 HG02280.hp1 HG02523.hp1 HG02523.hp2 HG02615.hp2 HG02717.hp2 HG03017.hp2 HG03209.hp1 HG03486.hp1 HG03486.hp2 HG03654.hp2 HG03831.hp1 NA18906.hp1 NA19005.hp1 NA19070.hp1 NA20129.hp1 NA20129.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0012 a0001c0014 a0002c0004 a0003c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0013 a0001c0001t0014 a0001c0001t0016 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0002t0001 a0001c0002t0007 a0001c0002t0010 a0001c0002t0012 a0001c0003t0003 a0001c0003t0005 a0001c0005t0001 a0001c0005t0007 a0001c0006t0003 a0001c0006t0007 a0001c0007t0005 a0001c0009t0001 a0001c0012t0007 a0001c0014t0020 a0002c0004t0001 a0002c0004t0006 a0003c0008t0003	a0001c0001t0001g0085 a0001c0001t0002g0030 a0001c0001t0002g0038 others(28): Show a0001c0001t0001g0085 a0001c0001t0002g0030 a0001c0001t0002g0038 a0001c0001t0003g0032 a0001c0001t0005g0037 a0001c0001t0008g0090 a0001c0001t0013g0040 a0001c0001t0014g0076 a0001c0001t0014g0078 a0001c0001t0016g0054 a0001c0001t0021g0015 a0001c0001t0023g0035 a0001c0001t0024g0031 a0001c0002t0001g0039 a0001c0002t0007g0079 a0001c0002t0010g0059 a0001c0002t0012g0080 a0001c0003t0003g0044 a0001c0003t0003g0071 a0001c0003t0005g0065 a0001c0005t0001g0070 a0001c0005t0007g0087 a0001c0006t0003g0083 a0001c0006t0007g0081 a0001c0007t0005g0075 a0001c0009t0001g0072 a0001c0012t0007g0082 a0001c0014t0020g0077 a0002c0004t0001g0062 a0002c0004t0006g0066 a0003c0008t0003g0068	31	32	0.9688	-23	c.-19 others(44): Show c.-191+32333_-191+32355delTTTTTTTTTTTTTTTTTTTTTTT	INPP4B	ENSG00000109452.13	transcript	ENST00000262992.9	protein_coding	2/25			chr4	TogoVar
INPP5D_chr2_233055342_233212903	233137848	AAAAAAAT others(16): Show AAAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0007 a0001c0005t0007	a0001c0005t0007g0186 a0001c0005t0007g0186	1	261	0.0038	-23	c.666 others(40): Show c.666-1992_666-1970delAAAAATATATATATATATATATA	INPP5D	ENSG00000168918.14	transcript	ENST00000445964.6	protein_coding	5/26		INFO_REALIGN_3_PRIME	chr2	TogoVar

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