Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LAPTM5_chr1_30727469_30762774	30754016	GACGTATC others(16): Show GACGTATCCTGTTTTGACACTGTT	G G	intron_variant intron_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0285 a0001c0001t0001g0285	1	420	0.0024	-23	c.87+ others(38): Show c.87+3620_87+3642delAACAGTGTCAAAACAGGATACGT	LAPTM5	ENSG00000162511.8	transcript	ENST00000294507.4	protein_coding	1/7			chr1	TogoVar
LARGE1_chr22_33267509_33925476	33681425	TTCATGAC others(16): Show TTCATGACTTAAGATTTCTGGGCC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0021	a0001c0002t0021g0099 a0001c0002t0021g0099	1	108	0.0093	-23	c.107 others(42): Show c.107-30780_107-30758delGGCCCAGAAATCTTAAGTCATGA	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/14			chr22	TogoVar
LARGE2_chr11_45917656_45934096	45923985	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18948.hp2 NA18948.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0073 a0001c0002t0001g0073	1	60	0.0167	-23	c.369 others(38): Show c.369-153_369-131delAAAAAAAAAAAAAAAAAAAAAAA	LARGE2	ENSG00000165905.18	transcript	ENST00000401752.6	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr11	TogoVar
LARP1B_chr4_128056312_128216988	128065323	CTCTCTCT others(16): Show CTCTCTCTCTTTCCTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0101 a0005c0006t0001g0101	1	306	0.0033	-23	c.-78 others(40): Show c.-78+3924_-78+3946delCTCTCTCTTTCCTTTCTTTTCTT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128073572	GTTTTTTT others(16): Show GTTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0332 a0002c0002t0002g0332	1	206	0.0049	-23	c.-77 others(38): Show c.-77-873_-77-851delTTTTTTTTTTTTTTTTTTTTTTT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP4_chr12_50395885_50485004	50436101	GGTGTGTG others(16): Show GGTGTGTGTGTGTGTGTGTGATAT	G G	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0200 a0001c0001t0001g0200	1	19	0.0526	-23	c.535 others(38): Show c.535+494_535+516delGTGATATGTGTGTGTGTGTGTGT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50460477	ATACCACT others(16): Show ATACCACTGCACATTTTAATTTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp2 HG01106.hp2 others(10): Show HG00140.hp2 HG00544.hp2 HG01106.hp2 HG01975.hp1 HG02040.hp1 HG03017.hp2 HG03834.hp1 HG04199.hp1 HG04204.hp2 HG04228.hp1 NA18969.hp1 NA18989.hp2 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0178 a0001c0001t0001g0191 a0003c0003t0001g0154 others(10): Show a0001c0001t0001g0178 a0001c0001t0001g0191 a0003c0003t0001g0154 a0003c0003t0001g0163 a0003c0003t0001g0164 a0003c0003t0001g0166 a0003c0003t0001g0167 a0003c0003t0001g0172 a0003c0003t0001g0174 a0003c0003t0001g0180 a0003c0003t0001g0181 a0003c0003t0001g0187 a0003c0003t0001g0188	13	316	0.0411	-23	c.112 others(40): Show c.1122-656_1122-634delACCACTGCACATTTTAATTTTTT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LAS1L_chrX_65507582_65539787	65527210	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	5	0.2000	-23	c.956 others(40): Show c.956+1027_956+1049delTTTTTTTTTTTTTTTTTTTTTTT	LAS1L	ENSG00000001497.18	transcript	ENST00000374811.8	protein_coding	7/13			chrX	TogoVar
LASP1NB_chr17_38920614_38934381	38931350	AACAGGGG others(16): Show AACAGGGGAACAGAAAAAGCCATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	420	0.0024	-23	c.50 others(34): Show c.5055_*5077delACAGGGGAACAGAAAAAGCCATT	LASP1NB	ENSG00000263874.3	transcript	ENST00000583195.3	protein_coding		1970		chr17	TogoVar
LAT2_chr7_74205006_74234834	74219009	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18960.hp1 NA19000.hp2 NA18960.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0173 a0001c0001t0001g0174	2	88	0.0227	-23	c.135 others(38): Show c.135-719_135-697delTTTTTTTTTTTTTTTTTTTTTTT	LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
LATS2_chr13_20968036_21066586	20969692	AAAAAAAT others(16): Show AAAAAAATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19084.hp2 NA19084.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0183 a0003c0003t0002g0183	1	314	0.0032	-23	c.51 others(34): Show c.5155_*5177delATATATATATATATATATTTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3343		chr13	TogoVar
LATS2_chr13_20968036_21066586	20969694	AAAAATAT others(16): Show AAAAATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0177 a0003c0003t0002g0177	1	307	0.0033	-23	c.51 others(34): Show c.5153_*5175delATATATATATATATATATATTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3341		chr13	TogoVar
LBHD1_chr11_62657817_62677267	62659907	AGGCAGGA others(16): Show AGGCAGGAGAATCGCTTGAACCTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0041 a0001c0001t0004g0041	1	358	0.0028	-23	c.31 others(34): Show c.3199_*3221delCAGGTTCAAGCGATTCTCCTGCC	LBHD1	ENSG00000162194.13	transcript	ENST00000354588.8	protein_coding		2909		chr11	TogoVar
LCN15_chr9_136754634_136769518	136768489	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(229): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp2 HG02723.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18959.hp2 NA18960.hp1 NA18963.hp1 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19030.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19063.hp1 NA19063.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp2 NA19078.hp2 NA19080.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0002c0004 others(1): Show a0001c0001 a0002c0002 a0002c0004 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0001 a0002c0004t0001 a0003c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(36): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0002g0006 a0001c0001t0002g0059 a0001c0001t0004g0050 a0002c0002t0001g0002 a0002c0004t0001g0011 a0003c0005t0001g0018	232	287	0.8084	-23	c.-40 others(34): Show c.-4024_-4002delAAAAAAAAAAAAAAAAAAAAAAA	LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding		3972		chr9	TogoVar
LCP2_chr5_170241233_170302777	170291116	GAGGGAAG others(16): Show GAGGGAAGGGGAGAGGGGAGGACA	G G	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0277 a0001c0001t0001g0277	1	382	0.0026	-23	c.141 others(40): Show c.141+2171_141+2193delTGTCCTCCCCTCTCCCCTTCCCT	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	2/20			chr5	TogoVar
LCT_chr2_135782850_135842184	135785690	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0168 a0002c0002t0001g0168	1	7	0.1429	-23	c.26 others(34): Show c.2611_*2633delAAAAAAAAAAAAAAAAAAAAAAA	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding		2159		chr2	TogoVar
LDAH_chr2_20679031_20828101	20827317	TATCAGTC others(16): Show TATCAGTCTACCACTGTAGACTGA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(180): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00438.hp1 HG00438.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01934.hp1 HG01952.hp2 HG01981.hp2 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02922.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18960.hp1 NA18960.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19007.hp1 NA19007.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0004 a0005c0007 a0001c0001 a0003c0004 a0005c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0003c0004t0002 a0005c0007t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 others(179): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0042 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0060 a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0100 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0117 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0154 a0001c0001t0001g0162 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0179 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0190 a0001c0001t0002g0025 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0076 a0001c0001t0002g0084 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0102 a0001c0001t0002g0106 a0001c0001t0002g0112 a0001c0001t0002g0129 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0141 a0001c0001t0002g0143 a0001c0001t0002g0146 a0001c0001t0002g0153 a0001c0001t0002g0155 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0168 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0183 a0001c0001t0002g0189 a0001c0001t0003g0008 a0001c0001t0003g0013 a0001c0001t0003g0014 a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0024 a0001c0001t0003g0030 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0063 a0001c0001t0003g0067 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0101 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0124 a0001c0001t0003g0125 a0001c0001t0003g0126 a0001c0001t0003g0140 a0001c0001t0003g0152 a0001c0001t0003g0161 a0001c0001t0003g0167 a0001c0001t0003g0170 a0001c0001t0003g0172 a0001c0001t0003g0173 a0001c0001t0003g0180 a0001c0001t0004g0001 a0001c0001t0004g0010 a0001c0001t0004g0011 a0001c0001t0004g0026 a0001c0001t0004g0031 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0073 a0001c0001t0004g0074 a0001c0001t0004g0075 a0001c0001t0004g0078 a0001c0001t0004g0079 a0001c0001t0004g0080 a0001c0001t0004g0098 a0001c0001t0004g0099 a0001c0001t0004g0116 a0001c0001t0004g0120 a0001c0001t0004g0130 a0001c0001t0004g0142 a0001c0001t0004g0156 a0001c0001t0004g0157 a0001c0001t0004g0160 a0001c0001t0004g0164 a0001c0001t0004g0175 a0001c0001t0004g0176 a0001c0001t0004g0185 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0005g0017 a0001c0001t0005g0035 a0001c0001t0005g0045 a0001c0001t0005g0046 a0001c0001t0005g0047 a0001c0001t0005g0048 a0001c0001t0005g0051 a0001c0001t0005g0059 a0001c0001t0005g0065 a0001c0001t0005g0077 a0001c0001t0005g0094 a0001c0001t0005g0097 a0001c0001t0005g0103 a0001c0001t0005g0107 a0001c0001t0005g0108 a0001c0001t0005g0113 a0001c0001t0005g0119 a0001c0001t0005g0123 a0001c0001t0005g0163 a0001c0001t0005g0165 a0001c0001t0005g0166 a0001c0001t0005g0227 a0001c0001t0007g0085 a0001c0001t0007g0086 a0001c0001t0008g0061 a0001c0001t0008g0093 a0001c0001t0009g0118 a0001c0001t0009g0145 a0001c0001t0010g0039 a0001c0001t0010g0115 a0001c0001t0011g0081 a0001c0001t0012g0007 a0001c0001t0015g0256 a0003c0004t0002g0127 a0003c0004t0002g0128 a0005c0007t0001g0062	183	254	0.7205	-23	c.-43 others(34): Show c.-4306_-4284delTCAGTCTACAGTGGTAGACTGAT	LDAH	ENSG00000118961.15	transcript	ENST00000237822.8	protein_coding		4217		chr2	TogoVar
LDB1_chr10_102101489_102125368	102106541	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0057 a0001c0001t0057	a0001c0001t0057g0093 a0001c0001t0057g0093	1	24	0.0417	-23	c.15 others(34): Show c.1529_*1551delTTTTTTTTTTTTTTTTTTTTTTT	LDB1	ENSG00000198728.11	transcript	ENST00000673968.1	protein_coding	11/11	1529		chr10	TogoVar
LDB2_chr4_16496541_16903645	16563429	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0048 a0001c0001t0002g0048	1	15	0.0667	-23	c.615 others(42): Show c.615+22470_615+22492delAAAAAAAAAAAAAAAAAAAAAAA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	5/7			chr4	TogoVar
LDLRAD4_chr18_13213760_13657751	13321861	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02976.hp1 HG02809.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0069 a0001c0001t0008 a0001c0001t0069	a0001c0001t0008g0108 a0001c0001t0069g0172 a0001c0001t0008g0108 a0001c0001t0069g0172	2	9	0.2222	-23	c.-38 others(44): Show c.-383+43692_-383+43714delAAAAAAAAAAAAAAAAAAAAAAA	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LEF1_chr4_108042548_108173932	108064672	CACACACA others(16): Show CACACACACACACACACACACAAT	C C	intron_variant intron_variant	MODIFIER	NA18981.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0140 a0001c0001t0001g0140	1	262	0.0038	-23	c.111 others(40): Show c.1117-311_1117-289delATTGTGTGTGTGTGTGTGTGTGT	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	9/11			chr4	TogoVar
LEF1_chr4_108042548_108173932	108074930	TAACTCAA others(16): Show TAACTCAAAAAAGAAAAAAGAAAA	T T	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0053 a0001c0001t0002g0053	1	262	0.0038	-23	c.100 others(42): Show c.1008+3267_1008+3289delTTTTCTTTTTTCTTTTTTGAGTT	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	8/11			chr4	TogoVar
LEF1_chr4_108042548_108173932	108173353	GCGCGGCG others(16): Show GCGCGGCGGCGCGGCCTTTGAAGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0217 a0001c0001t0001g0217	1	262	0.0038	-23	c.-56 others(34): Show c.-5609_-5587delACTTCAAAGGCCGCGCCGCCGCG	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding		4422		chr4	TogoVar
LEKR1_chr3_156821353_157051129	157049734	ATTAAGTA others(16): Show ATTAAGTAATTTGGGCAAAATTAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(110): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01071.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01255.hp2 HG01257.hp1 HG01358.hp1 HG01361.hp2 HG01433.hp2 HG01515.hp1 HG01884.hp1 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02027.hp1 HG02071.hp1 HG02071.hp2 HG02083.hp1 HG02165.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02735.hp1 HG02735.hp2 HG02896.hp1 HG03017.hp1 HG03017.hp2 HG03209.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp1 HG04199.hp2 NA18612.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18948.hp2 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18960.hp1 NA18973.hp2 NA18983.hp2 NA18986.hp2 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp2 NA19003.hp2 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19054.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19077.hp1 NA19077.hp2 NA19083.hp1 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA20300.hp2 NA20805.hp1 NA21309.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0001c0008 others(2): Show a0001c0001 a0001c0002 a0001c0008 a0003c0006 a0004c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0002t0001 a0001c0008t0001 a0003c0006t0001 a0004c0007t0001	a0001c0001t0001g0003 a0001c0001t0001g0045 a0001c0001t0001g0077 others(110): Show a0001c0001t0001g0003 a0001c0001t0001g0045 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0169 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0180 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0198 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0002g0119 a0001c0001t0004g0185 a0001c0001t0006g0202 a0001c0002t0001g0004 a0001c0002t0001g0012 a0001c0002t0001g0017 a0001c0002t0001g0053 a0001c0002t0001g0055 a0001c0002t0001g0056 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0063 a0001c0002t0001g0064 a0001c0002t0001g0065 a0001c0002t0001g0066 a0001c0002t0001g0067 a0001c0002t0001g0068 a0001c0002t0001g0069 a0001c0002t0001g0240 a0001c0008t0001g0125 a0003c0006t0001g0238 a0004c0007t0001g0074 a0004c0007t0001g0075	113	241	0.4689	-23	c.39 others(34): Show c.3985_*4007delTTAAGTAATTTGGGCAAAATTAC	LEKR1	ENSG00000197980.14	transcript	ENST00000356539.9	protein_coding		3606		chr3	TogoVar
LGMN_chr14_92698809_92753627	92719279	CCGCCGCC others(16): Show CCGCCGCCGCCGCCGCCGCCGCCA	C C	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0231	1	417	0.0024	-23	c.139 others(38): Show c.139-458_139-436delTGGCGGCGGCGGCGGCGGCGGCG	LGMN	ENSG00000100600.15	transcript	ENST00000334869.9	protein_coding	2/13			chr14	TogoVar
LGR6_chr1_202188799_202324761	202208394	GGAGAAGG others(16): Show GGAGAAGGAGGGGGGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00735.hp2 HG01099.hp2 others(14): Show HG00673.hp1 HG00735.hp2 HG01099.hp2 HG01243.hp1 HG01257.hp2 HG01891.hp1 HG01993.hp1 HG02074.hp1 HG02135.hp1 HG02148.hp1 HG02273.hp2 HG02293.hp2 HG03239.hp2 HG03516.hp2 HG03654.hp1 NA18971.hp2 NA19088.hp1	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0004 a0006c0009 a0001c0001 a0003c0004 a0006c0009	a0001c0001t0001 a0003c0004t0001 a0006c0009t0004 a0001c0001t0001 a0003c0004t0001 a0006c0009t0004	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 others(13): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0173 a0001c0001t0001g0249 a0001c0001t0001g0251 a0003c0004t0001g0220 a0003c0004t0001g0221 a0006c0009t0004g0017 a0006c0009t0004g0018	17	260	0.0654	-23	c.212 others(42): Show c.212+14201_212+14223delAGGGGGGAGAGAGAGAGAGAAGG	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr1	TogoVar
LHFPL3_chr7_104323603_104913561	104400104	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03831.hp1 NA18947.hp2 HG03831.hp1 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	a0001c0001t0004g0073 a0001c0001t0005g0020 a0001c0001t0004g0073 a0001c0001t0005g0020	2	3	0.6667	-23	c.445 others(42): Show c.445+70901_445+70923delAAAAAAAAAAAAAAAAAAAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL5_chr6_35800352_35829070	35818333	ATATATAT others(16): Show ATATATATATATATATGTATTTTT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02148.hp1 HG02165.hp2 others(16): Show HG01106.hp2 HG02148.hp1 HG02165.hp2 HG02257.hp1 HG02451.hp1 HG02451.hp2 HG02630.hp2 HG03130.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG04184.hp2 NA18941.hp1 NA18987.hp1 NA19063.hp2 NA19074.hp2 NA19090.hp1 NA20300.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0039 a0001c0001t0063 a0001c0001t0067 a0001c0001t0068	a0001c0001t0001g0109 a0001c0001t0001g0141 a0001c0001t0001g0178 others(16): Show a0001c0001t0001g0109 a0001c0001t0001g0141 a0001c0001t0001g0178 a0001c0001t0001g0180 a0001c0001t0001g0200 a0001c0001t0001g0204 a0001c0001t0001g0219 a0001c0001t0003g0125 a0001c0001t0003g0132 a0001c0001t0003g0197 a0001c0001t0003g0242 a0001c0001t0007g0105 a0001c0001t0007g0107 a0001c0001t0007g0108 a0001c0001t0011g0118 a0001c0001t0039g0179 a0001c0001t0063g0041 a0001c0001t0067g0043 a0001c0001t0068g0044	19	178	0.1067	-23	c.650 others(40): Show c.650-1102_650-1080delATATATATATATATGTATTTTTT	LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr6	TogoVar
LHPP_chr10_124456823_124619141	124507013	GGGGGTAG others(16): Show GGGGGTAGACAGGATTTCAGGTGA	G G	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG03669.hp1 HG04184.hp1 others(4): Show HG01515.hp2 HG03669.hp1 HG04184.hp1 HG04204.hp2 NA18980.hp1 NA19012.hp1 NA19081.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0067 a0001c0001t0001g0156 a0001c0001t0001g0171 others(4): Show a0001c0001t0001g0067 a0001c0001t0001g0156 a0001c0001t0001g0171 a0002c0002t0001g0021 a0002c0002t0001g0116 a0002c0002t0001g0141 a0002c0002t0001g0177	7	242	0.0289	-23	c.624 others(40): Show c.624+8890_624+8912delTAGACAGGATTTCAGGTGAGGGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507060	GTAGGGGT others(16): Show GTAGGGGTAGACAGGATTTCAGGT	G G	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0235 a0001c0001t0001g0235	1	232	0.0043	-23	c.624 others(40): Show c.624+8933_624+8955delTAGGGGTAGACAGGATTTCAGGT	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6			chr10	TogoVar
LHX4_chr1_180225264_180283984	180234195	ATATATAT others(16): Show ATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp1 HG01168.hp1 HG01169.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0042 a0002c0005t0001g0042	2	400	0.0050	-23	c.76+ others(38): Show c.76+3591_76+3613delTATATATATATATATATATATAT	LHX4	ENSG00000121454.6	transcript	ENST00000263726.4	protein_coding	1/5			chr1	TogoVar
LILRA5_chr19_54302070_54318166	54315175	AGAATAAT others(16): Show AGAATAATCCGCCCGGCGCGGTGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0044 a0003c0002t0002g0044	1	408	0.0025	-23	c.-21 others(34): Show c.-2179_-2157delCCACCGCGCCGGGCGGATTATTC	LILRA5	ENSG00000187116.14	transcript	ENST00000432233.8	protein_coding		2010		chr19	TogoVar
LIMD1_chr3_45589751_45691341	45659585	ACCCCAAA others(16): Show ACCCCAAACATATATATATGCTAT	A A	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01516.hp2 HG01517.hp2 others(9): Show HG01433.hp1 HG01516.hp2 HG01517.hp2 HG02055.hp1 HG02486.hp2 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG03225.hp1 HG03486.hp2 NA18906.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0015 a0001c0001t0021 a0001c0001t0059 others(4): Show a0001c0001t0015 a0001c0001t0021 a0001c0001t0059 a0001c0002t0025 a0001c0002t0039 a0001c0005t0015 a0001c0005t0040	a0001c0001t0015g0131 a0001c0001t0015g0132 a0001c0001t0015g0133 others(9): Show a0001c0001t0015g0131 a0001c0001t0015g0132 a0001c0001t0015g0133 a0001c0001t0021g0085 a0001c0001t0021g0090 a0001c0001t0021g0118 a0001c0001t0059g0023 a0001c0002t0025g0043 a0001c0002t0025g0044 a0001c0002t0039g0041 a0001c0005t0015g0159 a0001c0005t0040g0160	12	356	0.0337	-23	c.151 others(42): Show c.1511-6041_1511-6019delCCCCAAACATATATATATGCTAT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
LIMS1_chr2_108529470_108692246	108642333	GTGTTTTT others(16): Show GTGTTTTTTGTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG02572.hp1 NA18984.hp2 HG01256.hp1 HG02572.hp1 NA18984.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0001 a0002c0003t0026 a0001c0002t0001 a0002c0003t0026	a0001c0002t0001g0014 a0001c0002t0001g0023 a0002c0003t0026g0219 a0001c0002t0001g0014 a0001c0002t0001g0023 a0002c0003t0026g0219	3	243	0.0123	-23	c.33- others(40): Show c.33-17250_33-17228delTTTGTTTTTTGTTTTTTTTTTTT	LIMS1	ENSG00000169756.17	transcript	ENST00000544547.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIMS2_chr2_127633426_127680530	127648967	GGGGAGGG others(16): Show GGGGAGGGGAGGGAGGGGAGGGGA	G G	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0045 a0001c0002t0045	a0001c0002t0045g0234 a0001c0002t0045g0234	1	335	0.0030	-23	c.359 others(40): Show c.359+5434_359+5456delTCCCCTCCCCTCCCTCCCCTCCC	LIMS2	ENSG00000072163.20	transcript	ENST00000355119.9	protein_coding	4/9			chr2	TogoVar
LIN28A_chr1_26405817_26434728	26415685	GCTGGGCA others(16): Show GCTGGGCACAACATAGAATATGGC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(118): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00423.hp1 HG00558.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01070.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp2 HG01167.hp2 HG01168.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01517.hp1 HG01928.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG02074.hp2 HG02080.hp1 HG02148.hp1 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03471.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp2 NA18522.hp1 NA18906.hp2 NA18943.hp1 NA18944.hp2 NA18950.hp1 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18963.hp2 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18977.hp1 NA18977.hp2 NA18982.hp1 NA18985.hp2 NA18997.hp2 NA19007.hp1 NA19009.hp2 NA19043.hp1 NA19055.hp1 NA19068.hp2 NA19070.hp1 NA19072.hp1 NA19083.hp1 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0005 a0001c0001 a0001c0003 a0002c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0021 a0001c0001t0025 a0001c0003t0004 a0002c0005t0001	a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0027 others(71): Show a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0040 a0001c0001t0001g0063 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0094 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0188 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0018 a0001c0001t0002g0025 a0001c0001t0002g0035 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0059 a0001c0001t0002g0078 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0102 a0001c0001t0002g0107 a0001c0001t0002g0187 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0197 a0001c0001t0003g0069 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0110 a0001c0001t0003g0130 a0001c0001t0003g0194 a0001c0001t0004g0015 a0001c0001t0004g0019 a0001c0001t0004g0021 a0001c0001t0004g0023 a0001c0001t0004g0060 a0001c0001t0004g0103 a0001c0001t0004g0113 a0001c0001t0004g0129 a0001c0001t0004g0190 a0001c0001t0004g0193 a0001c0001t0005g0005 a0001c0001t0005g0062 a0001c0001t0005g0064 a0001c0001t0005g0065 a0001c0001t0005g0100 a0001c0001t0006g0077 a0001c0001t0006g0099 a0001c0001t0007g0112 a0001c0001t0008g0074 a0001c0001t0009g0015 a0001c0001t0009g0071 a0001c0001t0011g0049 a0001c0001t0013g0104 a0001c0001t0015g0005 a0001c0001t0021g0115 a0001c0001t0025g0109 a0001c0003t0004g0023 a0002c0005t0001g0007	121	374	0.3235	-23	c.228 others(40): Show c.228+4119_228+4141delAATATGGCCTGGGCACAACATAG	LIN28A	ENSG00000131914.11	transcript	ENST00000326279.11	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
LINGO2_chr9_27932617_29218601	28233118	ATGTGTGT others(16): Show ATGTGTGTGTGTATGTGTGGTCTG	A A	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0002 a0001c0001t0011g0002	1	62	0.0161	-23	c.-36 others(42): Show c.-36+62067_-36+62089delCAGACCACACATACACACACACA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28769506	ATATATAT others(16): Show ATATATATATATATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	61	0.0164	-23	c.-39 others(44): Show c.-394-99249_-394-99227delAAAAAAAAAAATATATATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LIPI_chr21_14103813_14215955	14106195	AAAAAAAA others(16): Show AAAAAAAAAAATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0243	1	344	0.0029	-23	c.27 others(34): Show c.2775_*2797delATATATATATATATTTTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2617		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106197	AAAAAAAA others(16): Show AAAAAAAAATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0270 a0001c0008t0001g0270	1	328	0.0030	-23	c.27 others(34): Show c.2773_*2795delATATATATATATATATTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2615		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106199	AAAAAAAT others(16): Show AAAAAAATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	333	0.0030	-23	c.27 others(34): Show c.2771_*2793delATATATATATATATATATTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2613		chr21	TogoVar
LIPJ_chr10_88581762_88611976	88598985	TATAAAAT others(16): Show TATAAAATATTATATTATATTATA	T T	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02080.hp1 HG03239.hp2 others(2): Show HG02071.hp1 HG02080.hp1 HG03239.hp2 HG04204.hp2 HG04228.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0016 a0001c0003t0002g0040 a0001c0003t0002g0016 a0001c0003t0002g0040	5	408	0.0123	-23	c.723 others(40): Show c.723+2054_723+2076delAATATTATATTATATTATAATAA	LIPJ	ENSG00000204022.9	transcript	ENST00000371939.7	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LIPN_chr10_88755020_88784626	88767644	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00597.hp2 HG00673.hp1 others(59): Show HG00408.hp2 HG00597.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00741.hp2 HG01099.hp1 HG01192.hp1 HG01346.hp1 HG01346.hp2 HG01943.hp2 HG02015.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02300.hp1 HG02523.hp2 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18950.hp1 NA18951.hp2 NA18953.hp1 NA18955.hp2 NA18957.hp1 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18971.hp1 NA18974.hp2 NA18975.hp1 NA18980.hp2 NA18984.hp2 NA18986.hp2 NA18987.hp2 NA18990.hp2 NA18992.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19007.hp2 NA19011.hp2 NA19058.hp1 NA19066.hp2 NA19070.hp2 NA19076.hp2 NA19078.hp1 NA19083.hp1 NA19085.hp2 NA19088.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0005 a0001c0002 a0001c0003 a0001c0005	a0001c0002t0001 a0001c0003t0001 a0001c0003t0008 others(2): Show a0001c0002t0001 a0001c0003t0001 a0001c0003t0008 a0001c0003t0015 a0001c0005t0001	a0001c0002t0001g0148 a0001c0003t0001g0001 a0001c0003t0001g0045 others(23): Show a0001c0002t0001g0148 a0001c0003t0001g0001 a0001c0003t0001g0045 a0001c0003t0001g0046 a0001c0003t0001g0048 a0001c0003t0001g0049 a0001c0003t0001g0211 a0001c0003t0001g0212 a0001c0003t0001g0213 a0001c0003t0001g0223 a0001c0003t0001g0228 a0001c0003t0001g0237 a0001c0003t0008g0001 a0001c0003t0008g0202 a0001c0003t0008g0203 a0001c0003t0008g0214 a0001c0003t0015g0204 a0001c0005t0001g0007 a0001c0005t0001g0035 a0001c0005t0001g0036 a0001c0005t0001g0060 a0001c0005t0001g0099 a0001c0005t0001g0110 a0001c0005t0001g0144 a0001c0005t0001g0155 a0001c0005t0001g0180	62	68	0.9118	-23	c.536 others(40): Show c.536-1122_536-1100delAAAAAAAAAAAAAAAAAAAAAAA	LIPN	ENSG00000204020.6	transcript	ENST00000404459.2	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
LIPT1_chr2_99149967_99168137	99161270	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	397	0.0025	-23	c.-1- others(36): Show c.-1-685_-1-663delAAAAAAAAAAAAAAAAAAAAATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161272	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	391	0.0026	-23	c.-1- others(36): Show c.-1-683_-1-661delAAAAAAAAAAAAAAAAAAATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LKAAEAR1_chr20_64078376_64089398	64089129	GGGGTTTG others(16): Show GGGGTTTGCCGCAGGCACAAGGGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	100	0.0100	-23	c.-49 others(34): Show c.-4933_-4911delTCCCTTGTGCCTGCGGCAAACCC	LKAAEAR1	ENSG00000171695.11	transcript	ENST00000302096.5	protein_coding		4732		chr20	TogoVar
LMCD1_chr3_8496823_8579668	8543378	TGATAGAT others(16): Show TGATAGATAGATAGATAGATGATA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00423.hp1 HG00642.hp1 others(20): Show HG00408.hp2 HG00423.hp1 HG00642.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01256.hp2 HG01258.hp1 HG02647.hp2 HG02896.hp2 HG02965.hp2 HG03017.hp1 HG03471.hp2 HG03669.hp1 HG03688.hp1 HG04199.hp2 NA18950.hp2 NA18956.hp2 NA18969.hp2 NA18981.hp1 NA18984.hp2	a0001 a0004 a0009 a0001 a0004 a0009	a0001c0001 a0001c0002 a0004c0011 others(1): Show a0001c0001 a0001c0002 a0004c0011 a0009c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0035 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0035 a0001c0002t0001 a0001c0002t0003 a0001c0002t0011 a0001c0002t0019 a0001c0002t0041 a0001c0002t0054 a0001c0002t0056 a0004c0011t0001 a0009c0005t0003	a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0262 others(18): Show a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0262 a0001c0001t0001g0265 a0001c0001t0001g0299 a0001c0001t0003g0263 a0001c0001t0003g0271 a0001c0001t0035g0247 a0001c0002t0001g0002 a0001c0002t0001g0006 a0001c0002t0001g0079 a0001c0002t0001g0253 a0001c0002t0003g0028 a0001c0002t0003g0166 a0001c0002t0011g0027 a0001c0002t0019g0074 a0001c0002t0041g0256 a0001c0002t0054g0029 a0001c0002t0056g0073 a0004c0011t0001g0254 a0009c0005t0003g0109	23	302	0.0762	-23	c.388 others(40): Show c.388-5170_388-5148delGATAGATAGATAGATAGATAGAT	LMCD1	ENSG00000071282.12	transcript	ENST00000157600.8	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
LMF1_chr16_848634_975984	853379	ACAGCGTC others(16): Show ACAGCGTCCTGGGTGGGGGACGTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0001 a0001c0012t0001	a0001c0012t0001g0094 a0001c0012t0001g0094	1	292	0.0034	-23	c.11 others(34): Show c.1130_*1152delAACGTCCCCCACCCAGGACGCTG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding		254		chr16	TogoVar
LMF1_chr16_848634_975984	857508	TCGGGACG others(16): Show TCGGGACGGGTGTGAGTGGTGTCA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03579.hp2 HG01109.hp1 HG03579.hp2	a0001 a0013 a0001 a0013	a0001c0002 a0013c0050 a0001c0002 a0013c0050	a0001c0002t0011 a0013c0050t0001 a0001c0002t0011 a0013c0050t0001	a0001c0002t0011g0292 a0013c0050t0001g0050 a0001c0002t0011g0292 a0013c0050t0001g0050	2	264	0.0076	-23	c.153 others(42): Show c.1530-2825_1530-2803delTGACACCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857595	GTGTCACG others(16): Show GTGTCACGGGACGGGTGTGAGTGA	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03516.hp1 HG02976.hp1 HG03516.hp1	a0009 a0009	a0009c0024 a0009c0024	a0009c0024t0001 a0009c0024t0001	a0009c0024t0001g0117 a0009c0024t0001g0118 a0009c0024t0001g0117 a0009c0024t0001g0118	2	278	0.0072	-23	c.153 others(42): Show c.1530-2912_1530-2890delTCACTCACACCCGTCCCGTGACA	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar

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