Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SMYD3_chr1_245744347_246512279	245976689	GGCCCAGG others(17): Show GGCCCAGGGAAAGCCATCGTCTCTA	G G	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0017 a0001c0001t0002g0017	1	150	0.0067	-24	c.532 others(43): Show c.532-46776_532-46753delTAGAGACGATGGCTTTCCCTGGGC	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245976712	TAGCCCAG others(17): Show TAGCCCAGGGAAAGCCATCGTCTCC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02280.hp2 HG02109.hp1 HG02280.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0001c0001 a0002c0005	a0001c0001t0002 a0002c0005t0001 a0001c0001t0002 a0002c0005t0001	a0001c0001t0002g0023 a0002c0005t0001g0138 a0001c0001t0002g0023 a0002c0005t0001g0138	2	150	0.0133	-24	c.532 others(43): Show c.532-46799_532-46776delGGAGACGATGGCTTTCCCTGGGCT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245976741	CAGGGAAA others(17): Show CAGGGAAAGCCATCGTCTCCGGCCT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0002 a0002c0005t0002	a0002c0005t0002g0118 a0002c0005t0002g0118	1	150	0.0067	-24	c.532 others(43): Show c.532-46828_532-46805delAGGCCGGAGACGATGGCTTTCCCT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245976861	TAGGGAAA others(17): Show TAGGGAAAGCCATCGTCTCCGGCCC	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0100 a0002c0003t0001g0100	1	150	0.0067	-24	c.532 others(43): Show c.532-46948_532-46925delGGGCCGGAGACGATGGCTTTCCCT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245976885	CAGGGAAA others(17): Show CAGGGAAAGCCATCGTCTCTAGCCT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0002 a0001c0009t0001g0002	1	150	0.0067	-24	c.532 others(43): Show c.532-46972_532-46949delAGGCTAGAGACGATGGCTTTCCCT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245976957	TAGGGAAA others(17): Show TAGGGAAAGCCATCGTCTCCGGCCC	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02965.hp2 HG03130.hp1 HG02258.hp2 HG02965.hp2 HG03130.hp1	a0001 a0002 a0001 a0002	a0001c0006 a0002c0005 a0002c0017 a0001c0006 a0002c0005 a0002c0017	a0001c0006t0001 a0002c0005t0001 a0002c0017t0001 a0001c0006t0001 a0002c0005t0001 a0002c0017t0001	a0001c0006t0001g0035 a0002c0005t0001g0142 a0002c0017t0001g0122 a0001c0006t0001g0035 a0002c0005t0001g0142 a0002c0017t0001g0122	3	150	0.0200	-24	c.532 others(43): Show c.532-47044_532-47021delGGGCCGGAGACGATGGCTTTCCCT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245976977	GGCCCAGG others(17): Show GGCCCAGGGAAAGCCATCGTCTCTA	G G	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01934.hp2 HG02056.hp1 HG00544.hp2 HG01934.hp2 HG02056.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0002c0003t0002 a0001c0001t0001 a0001c0001t0002 a0002c0003t0002	a0001c0001t0001g0089 a0001c0001t0002g0004 a0002c0003t0002g0104 a0001c0001t0001g0089 a0001c0001t0002g0004 a0002c0003t0002g0104	3	150	0.0200	-24	c.532 others(43): Show c.532-47064_532-47041delTAGAGACGATGGCTTTCCCTGGGC	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	245977025	AGCCCAGG others(17): Show AGCCCAGGGAAAGCCATCGTCTCCG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG00733.hp1 others(12): Show HG00408.hp1 HG00597.hp1 HG00733.hp1 HG00741.hp1 HG01109.hp1 HG02486.hp2 HG02559.hp1 HG02886.hp2 HG02965.hp2 HG03225.hp2 NA18963.hp2 NA18965.hp1 NA19000.hp1 NA19090.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(3): Show a0001c0001 a0001c0002 a0001c0006 a0002c0003 a0002c0004 a0002c0008	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0006t0001 a0002c0003t0001 a0002c0003t0002 a0002c0004t0001 a0002c0008t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0090 others(12): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0090 a0001c0001t0002g0030 a0001c0001t0002g0071 a0001c0002t0001g0009 a0001c0002t0001g0028 a0001c0002t0002g0088 a0001c0006t0001g0035 a0001c0006t0001g0076 a0002c0003t0001g0103 a0002c0003t0002g0143 a0002c0003t0002g0150 a0002c0004t0001g0119 a0002c0008t0001g0135	15	150	0.1000	-24	c.532 others(43): Show c.532-47112_532-47089delCGGAGACGATGGCTTTCCCTGGGC	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246116201	GACACACA others(17): Show GACACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0112 a0002c0003t0001g0112	1	150	0.0067	-24	c.532 others(45): Show c.532-186288_532-186265delGTGTGTGTGTGTGTGTGTGTGTGT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD3_chr1_245744347_246512279	246143126	TACACACA others(17): Show TACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02145.hp1 NA19240.hp1 HG01433.hp2 HG02145.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0001 a0001c0006t0003 a0001c0001t0001 a0001c0006t0001 a0001c0006t0003	a0001c0001t0001g0034 a0001c0006t0001g0025 a0001c0006t0003g0001 a0001c0001t0001g0034 a0001c0006t0001g0025 a0001c0006t0003g0001	3	150	0.0200	-24	c.531 others(45): Show c.531+184051_531+184074delGTGTGTGTGTGTGTGTGTGTGTGT	SMYD3	ENSG00000185420.19	transcript	ENST00000490107.6	protein_coding	5/11			chr1	TogoVar
SMYD4_chr17_1774485_1834902	1795405	CTCTATCT others(17): Show CTCTATCTATCTATCTATCTATCTA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00408.hp2 others(96): Show HG00099.hp1 HG00140.hp2 HG00408.hp2 HG00438.hp1 HG00544.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01109.hp2 HG01169.hp1 HG01175.hp1 HG01255.hp1 HG01257.hp1 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01884.hp2 HG02056.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp2 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02451.hp1 HG02572.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02895.hp2 HG02970.hp2 HG03130.hp2 HG03239.hp1 HG03453.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03831.hp2 HG04115.hp2 HG04184.hp1 NA18747.hp2 NA18906.hp2 NA18940.hp2 NA18944.hp1 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18951.hp1 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18957.hp1 NA18962.hp2 NA18963.hp1 NA18974.hp1 NA18975.hp1 NA18978.hp1 NA18981.hp1 NA18984.hp2 NA18985.hp2 NA18988.hp1 NA18990.hp2 NA19012.hp1 NA19057.hp1 NA19058.hp1 NA19062.hp1 NA19064.hp1 NA19074.hp2 NA19078.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19084.hp1 NA19086.hp2 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp1 NA21309.hp1	a0001 a0002 a0004 others(10): Show a0001 a0002 a0004 a0005 a0007 a0010 a0011 a0014 a0015 a0023 a0027 a0030 a0031	a0001c0027 a0002c0002 a0002c0018 others(13): Show a0001c0027 a0002c0002 a0002c0018 a0004c0010 a0004c0015 a0005c0036 a0007c0006 a0010c0014 a0011c0011 a0014c0016 a0015c0019 a0015c0021 a0023c0039 a0027c0033 a0030c0038 a0031c0035	a0001c0027t0002 a0002c0002t0002 a0002c0002t0003 others(19): Show a0001c0027t0002 a0002c0002t0002 a0002c0002t0003 a0002c0002t0023 a0002c0018t0011 a0004c0010t0040 a0004c0015t0002 a0004c0015t0008 a0004c0015t0022 a0004c0015t0024 a0005c0036t0035 a0007c0006t0005 a0010c0014t0006 a0011c0011t0004 a0014c0016t0002 a0015c0019t0002 a0015c0019t0009 a0015c0021t0001 a0023c0039t0039 a0027c0033t0005 a0030c0038t0008 a0031c0035t0022	a0001c0027t0002g0260 a0001c0027t0002g0272 a0002c0002t0002g0007 others(92): Show a0001c0027t0002g0260 a0001c0027t0002g0272 a0002c0002t0002g0007 a0002c0002t0002g0008 a0002c0002t0002g0009 a0002c0002t0002g0278 a0002c0002t0002g0281 a0002c0002t0002g0282 a0002c0002t0002g0288 a0002c0002t0002g0289 a0002c0002t0002g0290 a0002c0002t0002g0291 a0002c0002t0002g0292 a0002c0002t0002g0294 a0002c0002t0002g0295 a0002c0002t0002g0297 a0002c0002t0002g0299 a0002c0002t0002g0302 a0002c0002t0002g0303 a0002c0002t0002g0305 a0002c0002t0002g0306 a0002c0002t0002g0307 a0002c0002t0002g0310 a0002c0002t0002g0311 a0002c0002t0002g0314 a0002c0002t0002g0316 a0002c0002t0002g0317 a0002c0002t0002g0318 a0002c0002t0002g0319 a0002c0002t0002g0321 a0002c0002t0002g0322 a0002c0002t0002g0323 a0002c0002t0002g0324 a0002c0002t0002g0325 a0002c0002t0002g0326 a0002c0002t0002g0328 a0002c0002t0002g0329 a0002c0002t0002g0331 a0002c0002t0002g0332 a0002c0002t0002g0333 a0002c0002t0002g0334 a0002c0002t0002g0336 a0002c0002t0002g0337 a0002c0002t0002g0362 a0002c0002t0002g0363 a0002c0002t0002g0369 a0002c0002t0003g0083 a0002c0002t0023g0280 a0002c0002t0023g0298 a0002c0018t0011g0107 a0002c0018t0011g0108 a0002c0018t0011g0111 a0002c0018t0011g0112 a0002c0018t0011g0257 a0004c0010t0040g0276 a0004c0015t0002g0006 a0004c0015t0002g0273 a0004c0015t0002g0277 a0004c0015t0008g0274 a0004c0015t0022g0271 a0004c0015t0024g0373 a0004c0015t0024g0374 a0005c0036t0035g0251 a0007c0006t0005g0125 a0007c0006t0005g0138 a0007c0006t0005g0139 a0007c0006t0005g0140 a0007c0006t0005g0141 a0007c0006t0005g0214 a0007c0006t0005g0223 a0007c0006t0005g0237 a0010c0014t0006g0287 a0010c0014t0006g0308 a0010c0014t0006g0309 a0010c0014t0006g0312 a0010c0014t0006g0320 a0011c0011t0004g0042 a0011c0011t0004g0049 a0014c0016t0002g0283 a0014c0016t0002g0285 a0014c0016t0002g0313 a0014c0016t0002g0315 a0014c0016t0002g0330 a0014c0016t0002g0335 a0015c0019t0002g0304 a0015c0019t0009g0279 a0015c0019t0009g0284 a0015c0019t0009g0286 a0015c0019t0009g0293 a0015c0021t0001g0109 a0015c0021t0001g0110 a0023c0039t0039g0275 a0027c0033t0005g0105 a0030c0038t0008g0261 a0031c0035t0022g0270	99	390	0.2539	-24	c.153 others(43): Show c.1537+4428_1537+4451delTAGATAGATAGATAGATAGATAGA	SMYD4	ENSG00000186532.12	transcript	ENST00000305513.12	protein_coding	5/10			chr17	TogoVar
SNAP25_chr20_10213830_10312418	10282146	GGGAAGGA others(17): Show GGGAAGGAAGGAAGGATGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01884.hp2 HG02602.hp2 others(4): Show HG01106.hp1 HG01884.hp2 HG02602.hp2 HG03492.hp2 HG03704.hp2 HG03710.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0206 a0001c0001t0001g0238 a0001c0001t0002g0115 others(4): Show a0001c0001t0001g0206 a0001c0001t0001g0238 a0001c0001t0002g0115 a0001c0001t0002g0138 a0001c0001t0002g0205 a0001c0001t0003g0202 a0001c0001t0003g0203	7	340	0.0206	-24	c.115 others(41): Show c.115-2562_115-2539delTGGAAGGAAGGAAGGAAGGAAGGA	SNAP25	ENSG00000132639.15	transcript	ENST00000254976.7	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr20	TogoVar
SNAP25_chr20_10213830_10312418	10282162	TGGAAGGA others(17): Show TGGAAGGAAGGAAGGAAGGAAGGAA	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	340	0.0029	-24	c.115 others(41): Show c.115-2519_115-2496delAAGGAAGGAAGGAAGGAAGGAAGG	SNAP25	ENSG00000132639.15	transcript	ENST00000254976.7	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr20	TogoVar
SNAP29_chr22_20854007_20896214	20874349	CCACACAC others(17): Show CCACACACACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	NA18977.hp2 NA19001.hp1 NA19072.hp2 NA18977.hp2 NA19001.hp1 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0054 a0001c0001t0024 a0001c0001t0054	a0001c0001t0024g0061 a0001c0001t0024g0062 a0001c0001t0054g0165 a0001c0001t0024g0061 a0001c0001t0024g0062 a0001c0001t0054g0165	3	382	0.0079	-24	c.434 others(41): Show c.434+3840_434+3863delACACACACACACACACACACACAC	SNAP29	ENSG00000099940.12	transcript	ENST00000215730.12	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
SNAP91_chr6_83547885_83714101	83610724	TATATATA others(17): Show TATATATATATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0144 a0001c0001t0001g0144	1	366	0.0027	-24	c.885 others(37): Show c.885-71_885-48delTTATATATATATATATATATATAT	SNAP91	ENSG00000065609.15	transcript	ENST00000369694.7	protein_coding	11/29			chr6	TogoVar
SNCA_chr4_89719099_89842161	89792291	TTTGTTGT others(17): Show TTTGTTGTTGTTGTTGTTGTTGTTG	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02896.hp2 HG02970.hp1 others(1): Show HG02486.hp1 HG02896.hp2 HG02970.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0024 a0001c0001t0014 a0001c0001t0024	a0001c0001t0014g0319 a0001c0001t0014g0320 a0001c0001t0014g0321 others(1): Show a0001c0001t0014g0319 a0001c0001t0014g0320 a0001c0001t0014g0321 a0001c0001t0024g0318	4	338	0.0118	-24	c.306 others(43): Show c.306+29931_306+29954delCAACAACAACAACAACAACAACAA	SNCA	ENSG00000145335.17	transcript	ENST00000394991.8	protein_coding	4/5			chr4	TogoVar
SNCA_chr4_89719099_89842161	89821260	AAGGGAGG others(17): Show AAGGGAGGAAGGAAGGGAGGGAGAG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0322 a0001c0001t0034g0322	1	338	0.0030	-24	c.306 others(39): Show c.306+962_306+985delCTCTCCCTCCCTTCCTTCCTCCCT	SNCA	ENSG00000145335.17	transcript	ENST00000394991.8	protein_coding	4/5			chr4	TogoVar
SNCG_chr10_86953599_86968258	86967150	CGTGTGTG others(17): Show CGTGTGTGTGTGTGTGTGTGTGTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp1 HG02886.hp2 HG02895.hp2 others(5): Show HG02717.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp1 HG03098.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	8	400	0.0200	-24	c.41 others(35): Show c.4166_*4189delGTGTGTGTGTGTGTGTGTGTGTGT	SNCG	ENSG00000173267.14	transcript	ENST00000372017.4	protein_coding		3893		chr10	TogoVar
SND1_chr7_127647194_128097593	127705570	AAGATGTA others(17): Show AAGATGTAGATGCAGATGTAGATGT	A A	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02257.hp2 NA18948.hp2 others(1): Show HG02056.hp1 HG02257.hp2 NA18948.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0001t0001 a0001c0002t0001 a0001c0004t0001	a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0002t0001g0194 others(1): Show a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0002t0001g0194 a0001c0004t0001g0167	4	262	0.0153	-24	c.947 others(39): Show c.947+637_947+660delCAGATGTAGATGTAGATGTAGATG	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SND1_chr7_127647194_128097593	127953151	CGTGTGTG others(17): Show CGTGTGTGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01243.hp2 HG02258.hp2 others(5): Show HG01192.hp2 HG01243.hp2 HG02258.hp2 HG02723.hp1 HG03130.hp2 HG03139.hp1 HG03669.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0001 a0001c0001t0002 a0001c0010t0003 a0001c0001t0001 a0001c0001t0002 a0001c0010t0003	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0061 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0061 a0001c0001t0002g0035 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0113 a0001c0010t0003g0030	8	262	0.0305	-24	c.166 others(45): Show c.1669+23869_1669+23892delGTGTGTGTGTGTGTGTGTGTGTGT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SND1_chr7_127647194_128097593	127953198	GTGTGTGT others(17): Show GTGTGTGTGTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG04228.hp2 HG01516.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0068 a0001c0001t0003g0070 a0001c0001t0003g0068 a0001c0001t0003g0070	2	262	0.0076	-24	c.166 others(45): Show c.1669+23873_1669+23896delGTGTGTGTGTGTGTGTGTGTATGT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SND1_chr7_127647194_128097593	127983684	GTATTGAA others(17): Show GTATTGAATATTCAATATTCAATAA	G G	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	262	0.0038	-24	c.167 others(43): Show c.1670-7251_1670-7228delCAATATTCAATAATATTGAATATT	SND1	ENSG00000197157.11	transcript	ENST00000354725.8	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
SNRK_chr3_43281540_43356143	43339818	AATATATA others(17): Show AATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03492.hp2 NA19077.hp1 others(1): Show HG03098.hp1 HG03492.hp2 NA19077.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0044 a0001c0001t0002g0099 a0001c0001t0003g0060 others(1): Show a0001c0001t0002g0044 a0001c0001t0002g0099 a0001c0001t0003g0060 a0001c0001t0003g0077	4	258	0.0155	-24	c.732 others(39): Show c.732-436_732-413delATATATATATATATATATATATAT	SNRK	ENSG00000163788.14	transcript	ENST00000296088.12	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr3	TogoVar
SNRNP25_chr16_48828_62669	52446	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(222): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00639.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02257.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18963.hp1 NA18965.hp2 NA18966.hp1 NA18968.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18991.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA19000.hp2 NA19001.hp2 NA19003.hp2 NA19004.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp2 NA19056.hp2 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19067.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp2 NA19088.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 a0001c0001 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0004t0001 a0001c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(31): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0023 a0001c0001t0001g0032 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0003g0003 a0001c0001t0003g0006 a0001c0001t0003g0010 a0001c0001t0003g0016 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0030 a0001c0001t0004g0002 a0001c0001t0004g0004 a0001c0001t0004g0013 a0001c0001t0004g0025 a0001c0001t0005g0001 a0001c0001t0009g0003 a0001c0001t0010g0005 a0001c0001t0012g0019 a0001c0001t0013g0001 a0001c0004t0001g0009 a0001c0005t0001g0001	225	424	0.5307	-24	c.-15 others(35): Show c.-1570_-1547delAAAAAAAAAAAAAAAAAAAAAAAA	SNRNP25	ENSG00000161981.11	transcript	ENST00000293861.8	protein_coding		1381		chr16	TogoVar
SNRNP27_chr2_69888956_69910236	69902230	CCCTTCTT others(17): Show CCCTTCTTTCTTCTCCTTCCTCCTT	C C	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0066 a0001c0001t0002g0066	1	440	0.0023	-24	c.349 others(39): Show c.349-927_349-904delTCCTTCTTTCTTCTCCTTCCTCCT	SNRNP27	ENSG00000124380.11	transcript	ENST00000244227.8	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNRNP35_chr12_123453139_123471936	123463580	ATTGGCCA others(17): Show ATTGGCCAGACTGGTCTCAAACTCC	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0091 a0001c0002t0004g0091	1	186	0.0054	-24	c.-3- others(39): Show c.-3-1941_-3-1918delCAAACTCCTTGGCCAGACTGGTCT	SNRNP35	ENSG00000184209.15	transcript	ENST00000526639.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr12	TogoVar
SNRNP40_chr1_31254568_31301788	31282466	GCTATCTA others(17): Show GCTATCTATCTATCTATGTATCTAT	G G	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0183 a0001c0001t0003g0183	1	354	0.0028	-24	c.532 others(39): Show c.532-994_532-971delATAGATACATAGATAGATAGATAG	SNRNP40	ENSG00000060688.13	transcript	ENST00000263694.9	protein_coding	4/9			chr1	TogoVar
SNRNP40_chr1_31254568_31301788	31282558	GCTATCTA others(17): Show GCTATCTATCTATCTATCTATCTAT	G G	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	354	0.0028	-24	c.532 others(41): Show c.532-1086_532-1063delATAGATAGATAGATAGATAGATAG	SNRNP40	ENSG00000060688.13	transcript	ENST00000263694.9	protein_coding	4/9			chr1	TogoVar
SNRPG_chr2_70276362_70298740	70290823	TAAAAAAA others(17): Show TAAAAAAAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0191 a0001c0001t0001g0191	1	424	0.0024	-24	c.33- others(39): Show c.33-1475_33-1452delTTTTTTTTTTTTTTTTTTTTTTTT	SNRPG	ENSG00000143977.14	transcript	ENST00000272348.7	protein_coding	1/3			chr2	TogoVar
SNTB1_chr8_120530756_120817046	120667154	TGGGACCA others(17): Show TGGGACCATCATAGTTCACTGCAGC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00609.hp1 HG00621.hp1 others(138): Show HG00140.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00673.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01257.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01891.hp2 HG01952.hp1 HG01978.hp2 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02486.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02717.hp2 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03579.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04115.hp1 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18941.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18959.hp2 NA18963.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18989.hp1 NA18995.hp1 NA18999.hp1 NA19000.hp2 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19064.hp2 NA19066.hp2 NA19068.hp1 NA19077.hp1 NA19077.hp2 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2	a0001 a0003 a0004 others(3): Show a0001 a0003 a0004 a0005 a0007 a0008	a0001c0001 a0001c0002 a0001c0006 others(7): Show a0001c0001 a0001c0002 a0001c0006 a0001c0007 a0001c0011 a0003c0004 a0004c0005 a0005c0009 a0007c0012 a0008c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(29): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0019 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0013 a0001c0002t0016 a0001c0002t0018 a0001c0006t0001 a0001c0007t0001 a0001c0007t0005 a0001c0011t0005 a0003c0004t0001 a0004c0005t0001 a0004c0005t0002 a0005c0009t0002 a0007c0012t0001 a0008c0008t0013	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 others(138): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0053 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0087 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0121 a0001c0001t0001g0130 a0001c0001t0001g0142 a0001c0001t0001g0154 a0001c0001t0001g0175 a0001c0001t0001g0184 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0208 a0001c0001t0001g0218 a0001c0001t0001g0224 a0001c0001t0002g0006 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0036 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0061 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0071 a0001c0001t0002g0075 a0001c0001t0002g0079 a0001c0001t0002g0085 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0097 a0001c0001t0002g0100 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0128 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0140 a0001c0001t0002g0152 a0001c0001t0002g0158 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0169 a0001c0001t0002g0195 a0001c0001t0003g0037 a0001c0001t0003g0073 a0001c0001t0003g0078 a0001c0001t0003g0084 a0001c0001t0003g0088 a0001c0001t0003g0093 a0001c0001t0003g0118 a0001c0001t0003g0143 a0001c0001t0003g0157 a0001c0001t0003g0185 a0001c0001t0004g0064 a0001c0001t0004g0159 a0001c0001t0005g0057 a0001c0001t0005g0145 a0001c0001t0005g0221 a0001c0001t0006g0020 a0001c0001t0006g0024 a0001c0001t0006g0114 a0001c0001t0007g0060 a0001c0001t0007g0101 a0001c0001t0007g0139 a0001c0001t0007g0182 a0001c0001t0007g0183 a0001c0001t0007g0188 a0001c0001t0008g0034 a0001c0001t0009g0032 a0001c0001t0009g0127 a0001c0001t0009g0189 a0001c0001t0010g0065 a0001c0001t0010g0122 a0001c0001t0010g0177 a0001c0001t0012g0081 a0001c0001t0014g0205 a0001c0001t0014g0215 a0001c0001t0015g0001 a0001c0001t0019g0216 a0001c0002t0001g0235 a0001c0002t0001g0249 a0001c0002t0002g0247 a0001c0002t0003g0245 a0001c0002t0004g0244 a0001c0002t0006g0236 a0001c0002t0006g0240 a0001c0002t0013g0239 a0001c0002t0016g0238 a0001c0002t0018g0250 a0001c0006t0001g0056 a0001c0007t0001g0237 a0001c0007t0005g0248 a0001c0011t0005g0234 a0003c0004t0001g0251 a0003c0004t0001g0252 a0003c0004t0001g0253 a0004c0005t0001g0004 a0004c0005t0002g0003 a0005c0009t0002g0005 a0007c0012t0001g0242 a0008c0008t0013g0002	141	254	0.5551	-24	c.788 others(43): Show c.788+26514_788+26537delGCTGCAGTGAACTATGATGGTCCC	SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	2/6			chr8	TogoVar
SNTB2_chr16_69182164_69314052	69292383	ATATATAT others(17): Show ATATATATTATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0201 a0001c0001t0001g0201	1	218	0.0046	-24	c.134 others(43): Show c.1346-7199_1346-7176delTATATATATATATATATTATATAT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69292394	ATATATAT others(17): Show ATATATATATATATTATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00609.hp2 HG01081.hp2 others(17): Show HG00099.hp2 HG00609.hp2 HG01081.hp2 HG01433.hp1 HG02004.hp1 HG02027.hp1 HG02027.hp2 HG02129.hp2 HG02258.hp2 HG02698.hp1 HG03130.hp2 HG03471.hp2 HG03492.hp2 HG03654.hp1 HG03669.hp1 NA18612.hp2 NA18747.hp2 NA18951.hp2 NA19060.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0001c0001t0001 a0001c0001t0003 a0001c0001t0010	a0001c0001t0001g0179 a0001c0001t0003g0079 a0001c0001t0003g0082 others(17): Show a0001c0001t0001g0179 a0001c0001t0003g0079 a0001c0001t0003g0082 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0087 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0093 a0001c0001t0003g0094 a0001c0001t0003g0095 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0101 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0010g0078 a0001c0001t0010g0106 a0001c0001t0010g0140 a0001c0001t0010g0141	20	218	0.0917	-24	c.134 others(43): Show c.1346-7182_1346-7159delTATATATATATTATATATATATAT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTG1_chr8_49906407_50801692	49934280	GATCTATC others(17): Show GATCTATCTATCTATCTATCTATCT	G G	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0009 a0001c0001t0013g0009	1	106	0.0094	-24	c.-10 others(45): Show c.-103+22083_-103+22106delTCTATCTATCTATCTATCTATCTA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50259508	AAAAGAAA others(17): Show AAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0026 a0001c0001t0002g0026	1	106	0.0094	-24	c.-28 others(43): Show c.-28+86915_-28+86938delAAGAAAGAAAGAAAGAAAGAAAGA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50484145	TTTCTTTC others(17): Show TTTCTTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0021	a0001c0002t0021g0073 a0001c0002t0021g0073	1	106	0.0094	-24	c.364 others(43): Show c.364-18629_364-18606delTTTCCTTCCTTCCTTCCTTCCTTC	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50660402	AAAGAAAG others(17): Show AAAGAAAGAAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00741.hp1 HG01071.hp1 others(30): Show HG00621.hp1 HG00741.hp1 HG01071.hp1 HG01167.hp1 HG01243.hp1 HG01884.hp2 HG01978.hp1 HG01978.hp2 HG02055.hp2 HG02145.hp2 HG02300.hp1 HG02300.hp2 HG02698.hp2 HG02723.hp1 HG02965.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03225.hp1 HG03491.hp2 HG03516.hp2 HG03942.hp1 HG04184.hp2 NA18906.hp2 NA18944.hp1 NA18952.hp2 NA18992.hp1 NA19060.hp1 NA19068.hp2 NA19085.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0020 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0020 a0001c0002t0001 a0001c0002t0003 a0001c0002t0006 a0001c0002t0021 a0001c0002t0029 a0001c0002t0036 a0001c0002t0038 a0001c0002t0039 a0001c0002t0044 a0001c0002t0045 a0001c0002t0047	a0001c0001t0001g0086 a0001c0001t0003g0007 a0001c0001t0003g0019 others(30): Show a0001c0001t0001g0086 a0001c0001t0003g0007 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0003g0027 a0001c0001t0020g0043 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0077 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0001g0087 a0001c0002t0001g0092 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0003g0008 a0001c0002t0003g0011 a0001c0002t0003g0029 a0001c0002t0003g0041 a0001c0002t0006g0054 a0001c0002t0006g0064 a0001c0002t0006g0065 a0001c0002t0021g0073 a0001c0002t0029g0088 a0001c0002t0036g0016 a0001c0002t0038g0069 a0001c0002t0039g0075 a0001c0002t0044g0047 a0001c0002t0045g0046 a0001c0002t0047g0103	33	106	0.3113	-24	c.103 others(43): Show c.1038+1750_1038+1773delAGAAAGAAAGAAAGAAGAAAGAAA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50734808	GATATCTA others(17): Show GATATCTATATATATGGACATATAT	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02300.hp1 HG02723.hp1 others(2): Show HG01884.hp2 HG02300.hp1 HG02723.hp1 HG03516.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0020 a0001c0001t0002 a0001c0001t0003 a0001c0001t0020	a0001c0001t0002g0015 a0001c0001t0003g0007 a0001c0001t0003g0020 others(2): Show a0001c0001t0002g0015 a0001c0001t0003g0007 a0001c0001t0003g0020 a0001c0001t0003g0027 a0001c0001t0020g0043	5	106	0.0472	-24	c.128 others(45): Show c.1285-17105_1285-17082delGACATATATATATCTATATATATG	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	17/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG2_chr2_945849_1372613	1005806	AATATATA others(17): Show AATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA20805.hp1 NA18983.hp1 NA20805.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0156 a0002c0005t0001g0168 a0002c0005t0001g0156 a0002c0005t0001g0168	2	190	0.0105	-24	c.72+ others(41): Show c.72+54784_72+54807delTATATATATATATATATATATATA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1152582	GTGTGTGC others(17): Show GTGTGTGCACATGTGCATGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp1 HG01169.hp2 others(15): Show HG00323.hp2 HG00438.hp1 HG01169.hp2 HG01891.hp1 HG02145.hp2 HG02258.hp1 HG02300.hp2 HG02451.hp1 HG02572.hp2 HG02717.hp1 HG02886.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03579.hp1 HG03579.hp2 NA18522.hp1 NA18984.hp2	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0005 a0006 a0009 a0012	a0001c0001 a0001c0002 a0002c0003 others(5): Show a0001c0001 a0001c0002 a0002c0003 a0004c0004 a0005c0006 a0006c0028 a0009c0029 a0012c0019	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(6): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0002c0003t0001 a0004c0004t0001 a0005c0006t0001 a0006c0028t0001 a0009c0029t0001 a0012c0019t0001	a0001c0001t0001g0125 a0001c0002t0001g0109 a0001c0002t0002g0076 others(15): Show a0001c0001t0001g0125 a0001c0002t0001g0109 a0001c0002t0002g0076 a0002c0003t0001g0093 a0002c0003t0001g0098 a0004c0004t0001g0047 a0004c0004t0001g0088 a0004c0004t0001g0089 a0004c0004t0001g0116 a0005c0006t0001g0079 a0005c0006t0001g0081 a0005c0006t0001g0082 a0005c0006t0001g0083 a0005c0006t0001g0085 a0005c0006t0001g0086 a0006c0028t0001g0117 a0009c0029t0001g0152 a0012c0019t0001g0159	18	190	0.0947	-24	c.412 others(43): Show c.412-12952_412-12929delGCATGTGTGTATGTGTGCACATGT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	6/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1190495	CTATATAT others(17): Show CTATATATATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0002 a0003c0008t0002	a0003c0008t0002g0072 a0003c0008t0002g0072	1	190	0.0053	-24	c.591 others(43): Show c.591+17334_591+17357delATATATATATATATATATATATAT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNX10_chr7_26286862_26379383	26368489	TTTTAGGT others(17): Show TTTTAGGTTTGAATGGGATTTTCAA	T T	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0044 a0001c0001t0009g0044	1	390	0.0026	-24	c.312 others(41): Show c.312-3318_312-3295delGGGATTTTCAATTTAGGTTTGAAT	SNX10	ENSG00000086300.17	transcript	ENST00000338523.9	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr7	TogoVar
SNX16_chr8_81794583_81847185	81842468	CAGAGAGA others(17): Show CAGAGAGAGAGAGAGAGAGAGAGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01891.hp2 HG03927.hp1 HG01070.hp1 HG01891.hp2 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0036 a0001c0001t0001g0054 a0001c0001t0001g0057	3	306	0.0098	-24	c.-46 others(33): Show c.-467_-444delCTCTCTCTCTCTCTCTCTCTCTCT	SNX16	ENSG00000104497.15	transcript	ENST00000345957.9	protein_coding		284		chr8	TogoVar
SNX16_chr8_81794583_81847185	81842502	GAGAGAGA others(17): Show GAGAGAGAGAGAGAGAGAGAGAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02647.hp2 HG03098.hp2 others(1): Show HG02622.hp2 HG02647.hp2 HG03098.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0045 a0001c0001t0001g0001 a0001c0001t0001g0045	4	306	0.0131	-24	c.-50 others(33): Show c.-501_-478delTTCTCTCTCTCTCTCTCTCTCTCT	SNX16	ENSG00000104497.15	transcript	ENST00000345957.9	protein_coding		318		chr8	TogoVar
SNX16_chr8_81794583_81847185	81842523	AGAAAGAG others(17): Show AGAAAGAGAAAGAAAACGAGCGAGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG01071.hp2 HG01256.hp1 others(4): Show HG00558.hp1 HG01071.hp2 HG01256.hp1 HG02922.hp1 HG03654.hp1 NA18947.hp1 NA18950.hp2	a0000 a0001 a0000 a0001	a0000c0006 a0001c0001 a0001c0002 a0000c0006 a0001c0001 a0001c0002	a0000c0006t0002 a0001c0001t0002 a0001c0001t0004 others(3): Show a0000c0006t0002 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0013 a0001c0002t0003	a0000c0006t0002g0206 a0001c0001t0002g0169 a0001c0001t0004g0113 others(4): Show a0000c0006t0002g0206 a0001c0001t0002g0169 a0001c0001t0004g0113 a0001c0001t0005g0152 a0001c0001t0013g0199 a0001c0002t0003g0012 a0001c0002t0003g0110	7	306	0.0229	-24	c.-52 others(33): Show c.-522_-499delCCTCGCTCGTTTTCTTTCTCTTTC	SNX16	ENSG00000104497.15	transcript	ENST00000345957.9	protein_coding		339		chr8	TogoVar
SNX25_chr4_185204598_185368966	185301203	ACATTTCA others(17): Show ACATTTCAACACAGTTGTCTTCGGT	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03486.hp1 NA20129.hp2 HG02922.hp1 HG03486.hp1 NA20129.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0027 a0001c0001t0001g0208 a0003c0004t0001g0249 a0001c0001t0001g0027 a0001c0001t0001g0208 a0003c0004t0001g0249	3	276	0.0109	-24	c.116 others(43): Show c.1163-9428_1163-9405delTTCAACACAGTTGTCTTCGGTCAT	SNX25	ENSG00000109762.17	transcript	ENST00000652585.2	protein_coding	6/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
SNX27_chr1_151607050_151704080	151676270	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02109.hp1 HG02257.hp2 others(16): Show HG01884.hp2 HG02109.hp1 HG02257.hp2 HG02280.hp2 HG02486.hp2 HG02572.hp2 HG02615.hp1 HG02723.hp1 HG02809.hp1 HG02976.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03540.hp1 NA18982.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0023 a0001c0001t0024 others(12): Show a0001c0001t0012 a0001c0001t0023 a0001c0001t0024 a0001c0001t0069 a0001c0001t0070 a0001c0001t0080 a0001c0001t0090 a0001c0001t0091 a0001c0001t0092 a0001c0001t0093 a0001c0001t0119 a0001c0001t0132 a0001c0001t0141 a0001c0001t0160 a0001c0001t0164	a0001c0001t0012g0102 a0001c0001t0023g0003 a0001c0001t0023g0284 others(16): Show a0001c0001t0012g0102 a0001c0001t0023g0003 a0001c0001t0023g0284 a0001c0001t0023g0286 a0001c0001t0023g0331 a0001c0001t0024g0354 a0001c0001t0024g0356 a0001c0001t0069g0352 a0001c0001t0070g0353 a0001c0001t0080g0108 a0001c0001t0090g0285 a0001c0001t0091g0282 a0001c0001t0092g0283 a0001c0001t0093g0281 a0001c0001t0119g0003 a0001c0001t0132g0195 a0001c0001t0141g0013 a0001c0001t0160g0067 a0001c0001t0164g0062	19	366	0.0519	-24	c.115 others(43): Show c.1150-7056_1150-7033delTTTTTTTTTTTTTTTTTTTTTTTT	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX27_chr1_151607050_151704080	151696506	GTTCTTTC others(17): Show GTTCTTTCGTTCTTTCGTTCTTTCT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0150 a0001c0001t0150	a0001c0001t0150g0012 a0001c0001t0150g0012	1	366	0.0027	-24	c.20 others(35): Show c.2097_*2120delGTTCTTTCGTTCTTTCTTTCTTTC	SNX27	ENSG00000143376.14	transcript	ENST00000458013.7	protein_coding	12/12	2097	INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX29_chr16_11971734_12579287	12476375	AAAAAAAA others(17): Show AAAAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0021 a0001c0006t0021	a0001c0006t0021g0073 a0001c0006t0021g0073	1	176	0.0057	-24	c.203 others(43): Show c.2038-1342_2038-1319delAAAAAAAATATATATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12476377	AAAAAAAA others(17): Show AAAAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0076 a0001c0002t0076	a0001c0002t0076g0100 a0001c0002t0076g0100	1	176	0.0057	-24	c.203 others(43): Show c.2038-1340_2038-1317delAAAAAATATATATATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12476379	AAAAAATA others(17): Show AAAAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0094 a0001c0013t0094	a0001c0013t0094g0126 a0001c0013t0094g0126	1	176	0.0057	-24	c.203 others(43): Show c.2038-1338_2038-1315delAAAATATATATATATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar

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