| regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SNX29_chr16_11971734_12579287 | 12476389 | TATATATA others(17): Show |
T | intron_variant | MODIFIER | HG02922.hp2 HG03225.hp1 |
a0001 | a0001c0003a0001c0006 | a0001c0003t0002a0001c0006t0078 | a0001c0003t0002g0058a0001c0006t0078g0027 | 2 | 176 | 0.0114 | -24 | c.203 others(43): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 18/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SNX29_chr16_11971734_12579287 | 12512612 | GAGGGAGA others(17): Show |
G | intron_variant | MODIFIER | HG02015.hp2 HG02523.hp1 NA19009.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0007a0001c0001t0047a0001c0003t0103others(2): Show | a0001c0001t0007g0175a0001c0001t0047g0155a0001c0003t0103g0079others(2): Show | 5 | 176 | 0.0284 | -24 | c.217 others(45): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 19/20 | chr16 | TogoVar | ||||||
| SNX29_chr16_11971734_12579287 | 12553095 | TGGCCTGG others(17): Show |
T | intron_variant | MODIFIER | HG02109.hp1 HG02896.hp2 HG03579.hp1 |
a0001a0007 | a0001c0002a0007c0016 | a0001c0002t0106a0001c0002t0109a0007c0016t0108 | a0001c0002t0106g0123a0001c0002t0109g0036a0007c0016t0108g0049 | 3 | 176 | 0.0171 | -24 | c.231 others(45): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SNX29_chr16_11971734_12579287 | 12575845 | TTTGTTTT others(17): Show |
T | downstream_gene_variant | MODIFIER | HG00733.hp1 HG01433.hp2 HG03098.hp1 |
a0001 | a0001c0001 | a0001c0001t0030a0001c0001t0048a0001c0001t0058 | a0001c0001t0030g0014a0001c0001t0048g0052a0001c0001t0058g0107 | 3 | 176 | 0.0171 | -24 | c.*72 others(35): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1559 | chr16 | TogoVar | ||||||
| SNX6_chr14_34556093_34635148 | 34557496 | ATTCTTCT others(17): Show |
A | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00438.hp1 others(47): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(2): Show | a0001c0001t0001g0003a0001c0001t0001g0007a0001c0001t0001g0009others(47): Show | 50 | 322 | 0.1553 | -24 | c.*56 others(35): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 3596 | chr14 | TogoVar | ||||||
| SNX6_chr14_34556093_34635148 | 34559016 | CACACACA others(17): Show |
C | downstream_gene_variant | MODIFIER | HG04184.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0083 | 1 | 322 | 0.0031 | -24 | c.*40 others(35): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 2076 | chr14 | TogoVar | ||||||
| SNX7_chr1_98656721_98765500 | 98682075 | TCTTCCTT others(17): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(90): Show |
a0001 | a0001c0001a0001c0005a0001c0008 | a0001c0001t0001a0001c0005t0001a0001c0008t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0010others(87): Show | 93 | 378 | 0.2460 | -24 | c.181 others(41): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| SNX8_chr7_2246770_2319441 | 2317251 | CTTTTTTT others(17): Show |
C | upstream_gene_variant | MODIFIER | HG00621.hp2 HG01891.hp1 HG02280.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(5): Show | a0001c0001t0001g0175a0001c0001t0001g0188a0001c0001t0001g0257others(9): Show | 12 | 370 | 0.0324 | -24 | c.-28 others(35): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 2811 | chr7 | TogoVar | ||||||
| SNX9_chr6_157818246_157950077 | 157827008 | TTATAGTT others(17): Show |
T | intron_variant | MODIFIER | HG02145.hp1 HG02717.hp2 NA18906.hp2 |
a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0255a0001c0003t0003g0256a0001c0003t0003g0299 | 3 | 302 | 0.0099 | -24 | c.12+ others(39): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| SOAT1_chr1_179288797_179363680 | 179348760 | ATGTGTGT others(17): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00408.hp2 others(108): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0006a0001c0001t0010a0001c0001t0021others(25): Show | a0001c0001t0006g0011a0001c0001t0006g0015a0001c0001t0006g0017others(105): Show | 111 | 382 | 0.2906 | -24 | c.121 others(39): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| SOBP_chr6_107485117_107666306 | 107521909 | AACACACA others(17): Show |
A | intron_variant | MODIFIER | HG02809.hp2 NA18906.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0225a0001c0001t0001g0226 | 2 | 296 | 0.0068 | -24 | c.422 others(43): Show |
SOBP | ENSG00000112320.12 | transcript | ENST00000317357.10 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
| SOCS6_chr18_70284045_70335199 | 70333497 | AGTTTCCC others(17): Show |
A | downstream_gene_variant | MODIFIER | NA18940.hp1 | a0001 | a0001c0001 | a0001c0001t0025 | a0001c0001t0025g0235 | 1 | 358 | 0.0028 | -24 | c.*72 others(35): Show |
SOCS6 | ENSG00000170677.6 | transcript | ENST00000397942.4 | protein_coding | 3299 | chr18 | TogoVar | ||||||
| SOCS7_chr17_38346844_38410593 | 38381346 | GAGACTAT others(17): Show |
G | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG01074.hp2 others(7): Show |
a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0027a0001c0002t0005g0028a0001c0002t0005g0029others(7): Show | 10 | 289 | 0.0346 | -24 | c.168 others(43): Show |
SOCS7 | ENSG00000274211.6 | transcript | ENST00000612932.6 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
| SOCS7_chr17_38346844_38410593 | 38409340 | CTCGCGTA others(17): Show |
C | downstream_gene_variant | MODIFIER | HG01952.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0049 | 1 | 289 | 0.0035 | -24 | c.*98 others(35): Show |
SOCS7 | ENSG00000274211.6 | transcript | ENST00000612932.6 | protein_coding | 3748 | chr17 | TogoVar | ||||||
| SOGA1_chr20_36772447_36868538 | 36858461 | AAAACACA others(17): Show |
A | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG02809.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0022a0002c0004 | a0001c0001t0001a0001c0001t0003a0001c0022t0001others(1): Show | a0001c0001t0001g0269a0001c0001t0001g0270a0001c0001t0003g0036others(3): Show | 6 | 282 | 0.0213 | -24 | c.687 others(41): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | ||||||
| SON_chr21_33538038_33582481 | 33577604 | TACACACA others(17): Show |
T | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00621.hp2 HG01934.hp1 others(20): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0009others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(6): Show | a0001c0001t0001g0001a0001c0001t0001g0014a0001c0001t0001g0022others(18): Show | 23 | 364 | 0.0632 | -24 | c.*11 others(35): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 124 | chr21 | TogoVar | ||||||
| SORBS2_chr4_185580523_185817194 | 185731856 | CTCTCTCT others(17): Show |
C | intron_variant | MODIFIER | NA20129.hp2 | a0001 | a0001c0015 | a0001c0015t0004 | a0001c0015t0004g0082 | 1 | 312 | 0.0032 | -24 | c.-41 others(41): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | ||||||
| SORBS2_chr4_185580523_185817194 | 185731858 | CTCTCTCT others(17): Show |
C | intron_variant | MODIFIER | HG02965.hp1 | a0001 | a0001c0009 | a0001c0009t0004 | a0001c0009t0004g0287 | 1 | 312 | 0.0032 | -24 | c.-41 others(41): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | ||||||
| SORCS1_chr10_106568663_107169706 | 106606274 | TACACACA others(17): Show |
T | intron_variant | MODIFIER | HG02083.hp1 | a0001 | a0001c0004 | a0001c0004t0002 | a0001c0004t0002g0115 | 1 | 130 | 0.0077 | -24 | c.316 others(41): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 23/25 | chr10 | TogoVar | ||||||
| SORCS1_chr10_106568663_107169706 | 106926848 | CACACACA others(17): Show |
C | intron_variant | MODIFIER | HG02559.hp1 HG02622.hp2 HG02886.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0014others(1): Show | a0001c0001t0002a0001c0001t0004a0001c0004t0007others(3): Show | a0001c0001t0002g0061a0001c0001t0004g0060a0001c0004t0007g0046others(3): Show | 6 | 130 | 0.0462 | -24 | c.626 others(43): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2/25 | chr10 | TogoVar | ||||||
| SORCS2_chr4_7187538_7747827 | 7345565 | CTAGACAA others(17): Show |
C | intron_variant | MODIFIER | HG02630.hp1 HG02886.hp2 HG03225.hp2 |
a0001 | a0001c0001a0001c0029 | a0001c0001t0018a0001c0001t0072a0001c0029t0074 | a0001c0001t0018g0011a0001c0001t0072g0161a0001c0029t0074g0162 | 3 | 168 | 0.0179 | -24 | c.481 others(43): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
| SORCS2_chr4_7187538_7747827 | 7374108 | ATTCTTTC others(17): Show |
A | intron_variant | MODIFIER | HG01070.hp1 HG01070.hp2 HG01071.hp1 others(23): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0007others(20): Show | a0001c0001t0002g0089a0001c0001t0004g0138a0001c0001t0007g0063others(23): Show | 26 | 168 | 0.1548 | -24 | c.481 others(43): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
| SORCS2_chr4_7187538_7747827 | 7657608 | GGTGAGTG others(17): Show |
G | intron_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0014 | a0001c0014t0034 | a0001c0014t0034g0040 | 1 | 168 | 0.0060 | -24 | c.887 others(41): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 5/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
| SORCS2_chr4_7187538_7747827 | 7658257 | GAGTGAAT others(17): Show |
G | intron_variant | MODIFIER | HG01261.hp2 HG01891.hp2 HG02559.hp2 others(9): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0068a0001c0001t0069a0001c0002t0004others(9): Show | a0001c0001t0068g0007a0001c0001t0069g0092a0001c0002t0004g0018others(9): Show | 12 | 168 | 0.0714 | -24 | c.888 others(41): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 5/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
| SORCS2_chr4_7187538_7747827 | 7676890 | GCCTCTCT others(17): Show |
G | intron_variant | MODIFIER | HG02886.hp2 | a0001 | a0001c0029 | a0001c0029t0074 | a0001c0029t0074g0162 | 1 | 168 | 0.0060 | -24 | c.134 others(41): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 9/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
| SORCS2_chr4_7187538_7747827 | 7724123 | GGTGGTGG others(17): Show |
G | intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0138 | 1 | 168 | 0.0060 | -24 | c.261 others(41): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 19/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
| SORCS3_chr10_104636290_105270242 | 104684779 | GTTTTTTT others(17): Show |
G | intron_variant | MODIFIER | HG00609.hp1 HG00741.hp1 HG01106.hp2 others(17): Show |
a0001a0003a0009 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0100a0001c0001t0001g0113a0001c0001t0001g0122others(17): Show | 20 | 134 | 0.1493 | -24 | c.627 others(43): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
| SORD_chr15_45018195_45082185 | 45038126 | CCCTTCCT others(17): Show |
C | intron_variant | MODIFIER | HG03704.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0068 | 1 | 308 | 0.0033 | -24 | c.67- others(39): Show |
SORD | ENSG00000140263.15 | transcript | ENST00000267814.14 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
| SORD_chr15_45018195_45082185 | 45077204 | ATTATTTC others(17): Show |
A | downstream_gene_variant | MODIFIER | HG00438.hp1 HG00558.hp2 HG00642.hp2 others(85): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0002c0004others(5): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0042others(23): Show | a0001c0001t0004g0080a0001c0001t0005g0086a0001c0001t0005g0139others(81): Show | 88 | 308 | 0.2857 | -24 | c.*36 others(35): Show |
SORD | ENSG00000140263.15 | transcript | ENST00000267814.14 | protein_coding | 20 | chr15 | TogoVar | ||||||
| SORT1_chr1_109304575_109402918 | 109378699 | GATATATA others(17): Show |
G | intron_variant | MODIFIER | HG00609.hp2 HG01069.hp1 HG02040.hp1 others(11): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0028a0001c0002t0003others(3): Show | a0001c0001t0001g0074a0001c0001t0001g0090a0001c0001t0001g0124others(11): Show | 14 | 240 | 0.0583 | -24 | c.307 others(41): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 1/19 | chr1 | TogoVar | ||||||
| SOS2_chr14_50112130_50236578 | 50131546 | GCTCAAAC others(17): Show |
G | intron_variant | MODIFIER | HG02071.hp2 HG02132.hp1 HG02683.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(1): Show | a0001c0001t0001g0239a0001c0002t0001g0097a0001c0003t0001g0323others(5): Show | 8 | 382 | 0.0209 | -24 | c.307 others(41): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 19/22 | chr14 | TogoVar | ||||||
| SOS2_chr14_50112130_50236578 | 50178664 | GTGTGTGC others(17): Show |
G | intron_variant | MODIFIER | HG02132.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0277 | 1 | 382 | 0.0026 | -24 | c.969 others(41): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 7/22 | chr14 | TogoVar | ||||||
| SOS2_chr14_50112130_50236578 | 50178666 | GTGTGCAT others(17): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp2 HG00639.hp1 others(56): Show |
a0001a0005a0007 | a0001c0001a0005c0012a0007c0008 | a0001c0001t0001a0005c0012t0001a0007c0008t0001 | a0001c0001t0001g0121a0001c0001t0001g0124a0001c0001t0001g0230others(56): Show | 59 | 382 | 0.1545 | -24 | c.969 others(41): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 7/22 | chr14 | TogoVar | ||||||
| SOS2_chr14_50112130_50236578 | 50178668 | GTGCATAT others(17): Show |
G | intron_variant | MODIFIER | HG01192.hp1 HG02451.hp2 HG02683.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0122a0001c0001t0001g0239a0001c0001t0001g0273others(1): Show | 4 | 382 | 0.0105 | -24 | c.969 others(41): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 7/22 | chr14 | TogoVar | ||||||
| SOSTDC1_chr7_16456481_16470738 | 16470044 | TTATATAT others(17): Show |
T | upstream_gene_variant | MODIFIER | HG02896.hp2 HG02897.hp1 HG03195.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007a0001c0001t0001g0008a0001c0001t0001g0022 | 5 | 422 | 0.0119 | -24 | c.-44 others(35): Show |
SOSTDC1 | ENSG00000171243.8 | transcript | ENST00000307068.5 | protein_coding | 4307 | chr7 | TogoVar | ||||||
| SOWAHB_chr4_76889152_76903144 | 76900843 | AAAAAAAA others(17): Show |
A | upstream_gene_variant | MODIFIER | HG01192.hp2 HG01884.hp1 HG02145.hp2 others(1): Show |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0010a0003c0003t0004 | a0002c0002t0010g0000a0003c0003t0004g0000 | 4 | 438 | 0.0091 | -24 | c.-30 others(35): Show |
SOWAHB | ENSG00000186212.4 | transcript | ENST00000334306.4 | protein_coding | 2700 | chr4 | TogoVar | ||||||
| SOX18_chr20_64042582_64054639 | 64053497 | CCAGTCGT others(17): Show |
C | upstream_gene_variant | MODIFIER | HG02486.hp1 HG02976.hp2 HG03453.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0002a0001c0003t0001g0010 | 5 | 352 | 0.0142 | -24 | c.-40 others(35): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 3859 | chr20 | TogoVar | ||||||
| SOX2_chr3_181706925_181719436 | 181715433 | GTTTTTTT others(17): Show |
G | downstream_gene_variant | MODIFIER | HG02056.hp1 HG02145.hp1 HG02451.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0000a0001c0001t0006g0000 | 17 | 412 | 0.0413 | -24 | c.*21 others(35): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 998 | chr3 | TogoVar | ||||||
| SOX5_chr12_23524504_23954670 | 23570924 | AAAAAAAA others(17): Show |
A | intron_variant | MODIFIER | HG02083.hp1 NA18942.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0029a0001c0002t0052 | a0001c0001t0029g0143a0001c0002t0052g0124 | 2 | 212 | 0.0094 | -24 | c.134 others(43): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
| SOX5_chr12_23524504_23954670 | 23570928 | AAAATATA others(17): Show |
A | intron_variant | MODIFIER | HG02809.hp2 | a0001 | a0001c0001 | a0001c0001t0057 | a0001c0001t0057g0087 | 1 | 212 | 0.0047 | -24 | c.134 others(43): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
| SOX5_chr12_23524504_23954670 | 23570930 | AATATATA others(17): Show |
A | intron_variant | MODIFIER | NA18944.hp1 NA19005.hp2 |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0019 | a0001c0001t0014g0097a0001c0001t0019g0066 | 2 | 212 | 0.0094 | -24 | c.134 others(43): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | ||||||
| SOX5_chr12_23524504_23954670 | 23723581 | TACACACA others(17): Show |
T | intron_variant | MODIFIER | HG02602.hp2 HG04204.hp1 |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0039 | a0001c0001t0014g0128a0001c0001t0039g0004 | 2 | 212 | 0.0094 | -24 | c.810 others(43): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 6/14 | chr12 | TogoVar | ||||||
| SOX5_chr12_23524504_23954670 | 23804915 | TTATATAT others(17): Show |
T | intron_variant | MODIFIER | HG00597.hp2 HG00609.hp1 HG01069.hp1 others(23): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0108a0001c0001t0002g0194a0001c0001t0003g0093others(23): Show | 26 | 212 | 0.1226 | -24 | c.481 others(43): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | ||||||
| SOX5_chr12_23524504_23954670 | 23863793 | TACACACA others(17): Show |
T | intron_variant | MODIFIER | HG00609.hp1 HG01258.hp2 HG02148.hp1 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0014others(15): Show | a0001c0001t0001g0172a0001c0001t0003g0120a0001c0001t0003g0121others(16): Show | 19 | 212 | 0.0896 | -24 | c.271 others(43): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 2/14 | chr12 | TogoVar | ||||||
| SOX6_chr11_15961449_16361546 | 16132262 | AGAAAGAA others(17): Show |
A | intron_variant | MODIFIER | HG02572.hp2 | a0001 | a0001c0001 | a0001c0001t0031 | a0001c0001t0031g0044 | 1 | 218 | 0.0046 | -24 | c.778 others(43): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | ||||||
| SOX6_chr11_15961449_16361546 | 16132266 | AGAAGGAA others(17): Show |
A | intron_variant | MODIFIER | HG01496.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0062 | 1 | 218 | 0.0046 | -24 | c.778 others(43): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | ||||||
| SOX6_chr11_15961449_16361546 | 16132436 | AGAAAGAA others(17): Show |
A | intron_variant | MODIFIER | HG01243.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0026 | 1 | 218 | 0.0046 | -24 | c.778 others(43): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | ||||||
| SOX6_chr11_15961449_16361546 | 16291229 | TTATATAT others(17): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG00597.hp2 HG00738.hp1 others(32): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0176a0001c0001t0002g0208a0001c0001t0003g0177others(32): Show | 35 | 218 | 0.1606 | -24 | c.445 others(43): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 3/15 | chr11 | TogoVar | ||||||
| SOX6_chr11_15961449_16361546 | 16349699 | AGGAAGGA others(17): Show |
A | intron_variant | MODIFIER | NA19060.hp2 | a0001 | a0001c0001 | a0001c0001t0026 | a0001c0001t0026g0207 | 1 | 218 | 0.0046 | -24 | c.-5+ others(39): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 1/15 | chr11 | TogoVar | ||||||
| SOX6_chr11_15961449_16361546 | 16349703 | AGGAAGGA others(17): Show |
A | intron_variant | MODIFIER | HG00408.hp2 HG01256.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0007 | a0001c0001t0004g0184a0001c0001t0007g0206 | 2 | 218 | 0.0092 | -24 | c.-5+ others(39): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 1/15 | chr11 | TogoVar |