JoGo: Joint Open Genome and Omics Platform

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SRPK2_chr7_105111374_105393921	105170892	AAAGAAAG others(17): Show AAAGAAAGAAAGAAAGAAAGAAAGG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02572.hp1 HG03540.hp2 others(1): Show HG01243.hp2 HG02572.hp1 HG03540.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0010 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011	4	282	0.0142	-24	c.230 others(41): Show c.230-1651_230-1628delCCTTTCTTTCTTTCTTTCTTTCTT	SRPK2	ENSG00000135250.17	transcript	ENST00000393651.8	protein_coding	3/15			chr7	TogoVar
SRPK2_chr7_105111374_105393921	105170910	AGAAAGGA others(17): Show AGAAAGGAGAAAGAAAAAGAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01175.hp2 NA18956.hp2 NA19002.hp2 HG01175.hp2 NA18956.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132	3	282	0.0106	-24	c.230 others(41): Show c.230-1669_230-1646delCTTTTTCTTTTTCTTTCTCCTTTC	SRPK2	ENSG00000135250.17	transcript	ENST00000393651.8	protein_coding	3/15			chr7	TogoVar
SRPK2_chr7_105111374_105393921	105205517	TCACACAC others(17): Show TCACACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02698.hp1 HG02258.hp2 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0125 a0001c0001t0010g0085 a0001c0001t0001g0125 a0001c0001t0010g0085	2	282	0.0071	-24	c.72- others(39): Show c.72-1756_72-1733delTGTGTGTGTGTGTGTGTGTGTGTG	SRPK2	ENSG00000135250.17	transcript	ENST00000393651.8	protein_coding	2/15			chr7	TogoVar
SRPK2_chr7_105111374_105393921	105233091	AGAAGGAA others(17): Show AGAAGGAAGGAAGGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0100 a0001c0001t0001g0100	1	282	0.0036	-24	c.72- others(41): Show c.72-29330_72-29307delCTTCCTTCCTTCCTTCCTTCCTTC	SRPK2	ENSG00000135250.17	transcript	ENST00000393651.8	protein_coding	2/15			chr7	TogoVar
SRRM4_chr12_118976541_119168051	119075440	GTGATGAT others(17): Show GTGATGATGATGGTGATGATGGTGA	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03486.hp1 HG02717.hp1 HG03486.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0010 a0004c0004t0045 a0001c0001t0010 a0004c0004t0045	a0001c0001t0010g0264 a0004c0004t0045g0054 a0001c0001t0010g0264 a0004c0004t0045g0054	2	328	0.0061	-24	c.132 others(43): Show c.132-26787_132-26764delATGGTGATGATGGTGATGATGATG	SRRM4	ENSG00000139767.10	transcript	ENST00000267260.5	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
SRRM4_chr12_118976541_119168051	119158967	TTGTGTGT others(17): Show TTGTGTGTGTGTGTGTGTGTGTGTG	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0155 a0001c0001t0155	a0001c0001t0155g0091 a0001c0001t0155g0091	1	328	0.0031	-24	c.21 others(35): Show c.2197_*2220delGTGTGTGTGTGTGTGTGTGTGTGT	SRRM4	ENSG00000139767.10	transcript	ENST00000267260.5	protein_coding	13/13	2197	INFO_REALIGN_3_PRIME	chr12	TogoVar
SRRM4_chr12_118976541_119168051	119160277	GTCTCTCT others(17): Show GTCTCTCTCTCTGTCTCTCTCTCTC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0143 a0002c0002t0143	a0002c0002t0143g0184 a0002c0002t0143g0184	1	328	0.0031	-24	c.34 others(35): Show c.3491_*3514delGTCTCTCTCTCTCTCTCTCTCTCT	SRRM4	ENSG00000139767.10	transcript	ENST00000267260.5	protein_coding	13/13	3491	INFO_REALIGN_3_PRIME	chr12	TogoVar
SRRM4_chr12_118976541_119168051	119160289	GTCTCTCT others(17): Show GTCTCTCTCTCTCTCTCTCTCTCTC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0079 a0003c0003t0079	a0003c0003t0079g0028 a0003c0003t0079g0028	1	328	0.0031	-24	c.35 others(35): Show c.3502_*3525delTCTCTCTCTCTCTCTCTCTCTCTC	SRRM4	ENSG00000139767.10	transcript	ENST00000267260.5	protein_coding	13/13	3502	INFO_REALIGN_3_PRIME	chr12	TogoVar
SRSF11_chr1_70216380_70258052	70248959	CACAGAGG others(17): Show CACAGAGGGCTGTGTAAGTAGAAAA	C C	intron_variant intron_variant	MODIFIER	NA19080.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	338	0.0030	-24	c.102 others(41): Show c.1023-991_1023-968delCAGAGGGCTGTGTAAGTAGAAAAA	SRSF11	ENSG00000116754.14	transcript	ENST00000370949.2	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
SRSF11_chr1_70216380_70258052	70254510	CGTGTGTG others(17): Show CGTGTGTGTGTGTGTGTGTGTGTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03491.hp1 HG03492.hp1 HG03491.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	2	338	0.0059	-24	c.37 others(35): Show c.3706_*3729delGTGTGTGTGTGTGTGTGTGTGTGT	SRSF11	ENSG00000116754.14	transcript	ENST00000370949.2	protein_coding		1459		chr1	TogoVar
SSBP2_chr5_81407804_81756097	81445154	ATATATAT others(17): Show ATATATATATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0064 a0001c0002t0064	a0001c0002t0064g0123 a0001c0002t0064g0123	1	206	0.0049	-24	c.802 others(41): Show c.802+1690_802+1713delCATATATATATATATATATATATA	SSBP2	ENSG00000145687.17	transcript	ENST00000615665.5	protein_coding	12/16			chr5	TogoVar
SSBP2_chr5_81407804_81756097	81488010	AATATATA others(17): Show AATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00741.hp2 HG01256.hp1 others(7): Show HG00733.hp2 HG00741.hp2 HG01256.hp1 HG01346.hp1 HG01361.hp1 HG02055.hp1 HG02451.hp1 HG02976.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0017 a0001c0001t0040 a0001c0001t0041 others(2): Show a0001c0001t0017 a0001c0001t0040 a0001c0001t0041 a0001c0002t0001 a0001c0002t0011	a0001c0001t0017g0086 a0001c0001t0040g0085 a0001c0001t0041g0084 others(7): Show a0001c0001t0017g0086 a0001c0001t0040g0085 a0001c0001t0041g0084 a0001c0002t0001g0023 a0001c0002t0001g0132 a0001c0002t0001g0169 a0001c0002t0001g0171 a0001c0002t0001g0174 a0001c0002t0001g0179 a0001c0002t0011g0165	10	206	0.0485	-24	c.432 others(41): Show c.432+1216_432+1239delATATATATATATATATATATATAT	SSBP2	ENSG00000145687.17	transcript	ENST00000615665.5	protein_coding	6/16			chr5	TogoVar
SSBP2_chr5_81407804_81756097	81501212	AATATATA others(17): Show AATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02683.hp2 HG02735.hp2 others(2): Show HG01243.hp2 HG02683.hp2 HG02735.hp2 HG03471.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0071 a0001c0001t0072 others(2): Show a0001c0001t0016 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074	a0001c0001t0016g0125 a0001c0001t0071g0126 a0001c0001t0072g0127 others(2): Show a0001c0001t0016g0125 a0001c0001t0071g0126 a0001c0001t0072g0127 a0001c0001t0073g0177 a0001c0001t0074g0182	5	206	0.0243	-24	c.373 others(43): Show c.373-11927_373-11904delATATATATATATATATATATATAT	SSBP2	ENSG00000145687.17	transcript	ENST00000615665.5	protein_coding	5/16			chr5	TogoVar
SSBP2_chr5_81407804_81756097	81736166	ACACACAC others(17): Show ACACACACACACACACACACACACT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03471.hp1 HG03486.hp2 others(2): Show HG01243.hp2 HG03471.hp1 HG03486.hp2 NA18522.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0016 a0001c0001t0055 a0001c0001t0071 others(2): Show a0001c0001t0016 a0001c0001t0055 a0001c0001t0071 a0001c0001t0072 a0001c0002t0052	a0001c0001t0016g0125 a0001c0001t0055g0120 a0001c0001t0071g0126 others(2): Show a0001c0001t0016g0125 a0001c0001t0055g0120 a0001c0001t0071g0126 a0001c0001t0072g0127 a0001c0002t0052g0119	5	206	0.0243	-24	c.62+ others(41): Show c.62+14791_62+14814delAGTGTGTGTGTGTGTGTGTGTGTG	SSBP2	ENSG00000145687.17	transcript	ENST00000615665.5	protein_coding	1/16			chr5	TogoVar
SSBP4_chr19_18414398_18439562	18431190	GGTCCTGG others(17): Show GGTCCTGGTGACCACTGGTGCCTGA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00408.hp1 others(165): Show HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG01069.hp2 HG01071.hp1 HG01074.hp1 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp2 HG02056.hp2 HG02109.hp1 HG02132.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18951.hp1 NA18955.hp1 NA18961.hp2 NA18964.hp1 NA18970.hp1 NA18971.hp2 NA18972.hp1 NA18975.hp1 NA18982.hp1 NA18985.hp1 NA18994.hp2 NA18997.hp2 NA19002.hp2 NA19011.hp1 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19058.hp1 NA19063.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19077.hp1 NA19080.hp2 NA19081.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0003c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 a0001c0002t0002 a0001c0004t0001 a0001c0005t0001 a0001c0007t0001 a0001c0009t0001 a0003c0010t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 others(73): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0085 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0003g0007 a0001c0001t0003g0063 a0001c0001t0004g0002 a0001c0001t0004g0054 a0001c0001t0005g0007 a0001c0001t0006g0110 a0001c0001t0007g0068 a0001c0002t0001g0084 a0001c0002t0001g0118 a0001c0002t0002g0039 a0001c0002t0002g0091 a0001c0004t0001g0031 a0001c0005t0001g0006 a0001c0005t0001g0052 a0001c0007t0001g0018 a0001c0007t0001g0108 a0001c0009t0001g0058 a0003c0010t0001g0062	168	302	0.5563	-24	c.370 others(39): Show c.370-156_370-133delGTGACCACTGGTGCCTGAGTCCTG	SSBP4	ENSG00000130511.16	transcript	ENST00000270061.12	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr19	TogoVar
SSC4D_chr7_76384337_76414697	76405299	ATATATAT others(17): Show ATATATATATATATATATGTATTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19043.hp2 NA19030.hp1 NA19043.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0123 a0003c0003t0001g0124 a0003c0003t0001g0123 a0003c0003t0001g0124	2	388	0.0052	-24	c.-66 others(39): Show c.-66-818_-66-795delAAAATACATATATATATATATATA	SSC4D	ENSG00000146700.9	transcript	ENST00000275560.4	protein_coding	1/10			chr7	TogoVar
SSH1_chr12_108773191_108862583	108777088	GGAGGCGG others(17): Show GGAGGCGGAGGTTGCAGTGAGCCGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0041 a0001c0002t0041	a0001c0002t0041g0036 a0001c0002t0041g0036	1	332	0.0030	-24	c.10 others(37): Show c.10876_*10899delTCGGCTCACTGCAACCTCCGCCTC	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding		1102		chr12	TogoVar
SSH1_chr12_108773191_108862583	108836012	ACTATATT others(17): Show ACTATATTAATATAATCGATTATAT	A A	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0119 a0001c0001t0005g0119	1	332	0.0030	-24	c.111 others(43): Show c.111-12675_111-12652delATATAATCGATTATATTAATATAG	SSH1	ENSG00000084112.15	transcript	ENST00000326495.10	protein_coding	2/14			chr12	TogoVar
SSH2_chr17_29620938_29935228	29913347	AATATATA others(17): Show AATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0215 a0002c0002t0002g0215	1	232	0.0043	-24	c.63+ others(41): Show c.63+16567_63+16590delATATATATATATATATATATATAT	SSH2	ENSG00000141298.19	transcript	ENST00000540801.6	protein_coding	1/15			chr17	TogoVar
SSMEM1_chr7_130202860_130221844	130214945	TAAGCTAT others(17): Show TAAGCTATCCACCTCATGTCATTGA	T T	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	366	0.0027	-24	c.239 others(41): Show c.239-1027_239-1004delAGCTATCCACCTCATGTCATTGAA	SSMEM1	ENSG00000165120.5	transcript	ENST00000297819.4	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
SSPN_chr12_26190573_26239777	26191677	TACACACA others(17): Show TACACACACACACACACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00323.hp2 others(116): Show HG00099.hp2 HG00140.hp2 HG00323.hp2 HG00438.hp2 HG00639.hp1 HG00733.hp1 HG00738.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01433.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01993.hp1 HG02015.hp1 HG02027.hp2 HG02071.hp1 HG02080.hp2 HG02129.hp1 HG02145.hp2 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp2 HG03486.hp1 HG03492.hp2 HG03540.hp1 HG03669.hp1 HG03669.hp2 HG03710.hp2 HG03831.hp2 HG04184.hp2 HG06807.hp2 NA18522.hp2 NA18906.hp2 NA18940.hp2 NA18941.hp1 NA18950.hp2 NA18952.hp2 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18962.hp2 NA18965.hp1 NA18965.hp2 NA18969.hp2 NA18972.hp1 NA18982.hp1 NA18984.hp2 NA18985.hp2 NA18988.hp2 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19006.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19058.hp2 NA19060.hp1 NA19068.hp2 NA19074.hp2 NA19078.hp1 NA19082.hp1 NA19086.hp1 NA19090.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0007	a0001c0001 a0001c0002 a0001c0004 others(5): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003 a0003c0007 a0004c0006 a0005c0005 a0007c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(27): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0025 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0055 a0001c0002t0005 a0001c0002t0008 a0001c0002t0014 a0001c0002t0017 a0001c0002t0025 a0001c0002t0027 a0001c0002t0034 a0001c0004t0004 a0002c0003t0001 a0002c0003t0006 a0002c0003t0012 a0003c0007t0031 a0003c0007t0032 a0004c0006t0047 a0004c0006t0050 a0005c0005t0006 a0007c0008t0007	a0001c0001t0002g0004 a0001c0001t0002g0012 a0001c0001t0002g0063 others(109): Show a0001c0001t0002g0004 a0001c0001t0002g0012 a0001c0001t0002g0063 a0001c0001t0002g0067 a0001c0001t0002g0073 a0001c0001t0002g0114 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0139 a0001c0001t0002g0144 a0001c0001t0002g0148 a0001c0001t0003g0018 a0001c0001t0003g0156 a0001c0001t0003g0157 a0001c0001t0004g0014 a0001c0001t0004g0022 a0001c0001t0004g0023 a0001c0001t0004g0117 a0001c0001t0004g0118 a0001c0001t0004g0119 a0001c0001t0004g0122 a0001c0001t0004g0126 a0001c0001t0004g0127 a0001c0001t0004g0128 a0001c0001t0004g0129 a0001c0001t0004g0130 a0001c0001t0004g0131 a0001c0001t0004g0132 a0001c0001t0004g0133 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0004g0137 a0001c0001t0004g0140 a0001c0001t0004g0141 a0001c0001t0004g0142 a0001c0001t0004g0143 a0001c0001t0004g0146 a0001c0001t0004g0149 a0001c0001t0004g0150 a0001c0001t0004g0151 a0001c0001t0004g0165 a0001c0001t0004g0170 a0001c0001t0007g0107 a0001c0001t0007g0159 a0001c0001t0007g0160 a0001c0001t0007g0162 a0001c0001t0007g0166 a0001c0001t0007g0167 a0001c0001t0007g0174 a0001c0001t0007g0175 a0001c0001t0013g0021 a0001c0001t0013g0145 a0001c0001t0015g0015 a0001c0001t0015g0136 a0001c0001t0016g0158 a0001c0001t0016g0161 a0001c0001t0016g0171 a0001c0001t0025g0163 a0001c0001t0036g0014 a0001c0001t0038g0138 a0001c0001t0039g0014 a0001c0001t0040g0147 a0001c0001t0055g0172 a0001c0002t0005g0120 a0001c0002t0005g0121 a0001c0002t0005g0274 a0001c0002t0005g0283 a0001c0002t0005g0284 a0001c0002t0005g0285 a0001c0002t0005g0288 a0001c0002t0005g0291 a0001c0002t0005g0292 a0001c0002t0005g0293 a0001c0002t0005g0295 a0001c0002t0005g0302 a0001c0002t0008g0286 a0001c0002t0008g0289 a0001c0002t0014g0287 a0001c0002t0014g0290 a0001c0002t0017g0033 a0001c0002t0017g0034 a0001c0002t0017g0035 a0001c0002t0025g0198 a0001c0002t0027g0177 a0001c0002t0027g0238 a0001c0002t0034g0178 a0001c0004t0004g0015 a0001c0004t0004g0021 a0001c0004t0004g0152 a0001c0004t0004g0153 a0002c0003t0001g0020 a0002c0003t0006g0009 a0002c0003t0006g0020 a0002c0003t0006g0098 a0002c0003t0006g0100 a0002c0003t0006g0101 a0002c0003t0006g0102 a0002c0003t0006g0103 a0002c0003t0006g0106 a0002c0003t0006g0108 a0002c0003t0006g0110 a0002c0003t0006g0111 a0002c0003t0012g0109 a0002c0003t0012g0112 a0003c0007t0031g0304 a0003c0007t0032g0303 a0004c0006t0047g0105 a0004c0006t0050g0113 a0005c0005t0006g0259 a0005c0005t0006g0260 a0007c0008t0007g0164	119	384	0.3099	-24	c.-39 others(35): Show c.-3995_-3972delACACACACACACACACACACACAC	SSPN	ENSG00000123096.12	transcript	ENST00000242729.7	protein_coding		3895		chr12	TogoVar
SSTR1_chr14_38202904_38218067	38210558	CGCTCTGA others(17): Show CGCTCTGAGCCCGGGCCACGCAGGG	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02109.hp2 HG03579.hp1 NA18973.hp2 others(3): Show HG02109.hp2 HG03579.hp1 NA18973.hp2 NA18980.hp2 NA19010.hp2 NA19074.hp1	a0000 a0000	a0000c0004 a0000c0007 a0000c0004 a0000c0007	a0000c0004t0012 a0000c0004t0034 a0000c0007t0035 a0000c0004t0012 a0000c0004t0034 a0000c0007t0035	a0000c0004t0012g0003 a0000c0004t0034g0005 a0000c0007t0035g0003 a0000c0004t0012g0003 a0000c0004t0034g0005 a0000c0007t0035g0003	6	456	0.0132	-24	c.20 others(31): Show c.20_*43delTCTGAGCCCGGGCCACGCAGGGGC	SSTR1	ENSG00000139874.6	transcript	ENST00000267377.3	protein_coding	3/3	20	INFO_REALIGN_3_PRIME	chr14	TogoVar
SSTR2_chr17_73160010_73181633	73162718	AAAAGAAA others(17): Show AAAAGAAAGAAAGAAAGAAGGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00423.hp1 others(139): Show HG00099.hp2 HG00280.hp1 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp2 HG00609.hp2 HG00621.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01255.hp2 HG01346.hp1 HG01358.hp2 HG01433.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02040.hp2 HG02071.hp2 HG02074.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp2 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02300.hp1 HG02451.hp1 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02976.hp2 HG03490.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03927.hp1 HG03942.hp2 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp2 NA18940.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18946.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18955.hp1 NA18962.hp2 NA18968.hp1 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19079.hp2 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19086.hp1 NA19090.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 others(67): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0068 a0001c0001t0149 a0001c0001t0150 a0001c0001t0151 a0001c0001t0152 a0001c0001t0153 a0001c0001t0154 a0001c0001t0155 a0001c0001t0156 a0001c0001t0157 a0001c0001t0158 a0001c0001t0160 a0001c0001t0161 a0001c0001t0162 a0001c0001t0163 a0001c0001t0164 a0001c0001t0165 a0001c0001t0166 a0001c0001t0167 a0001c0001t0168 a0001c0001t0169 a0001c0001t0170 a0001c0001t0171 a0001c0001t0172 a0001c0001t0173 a0001c0001t0174 a0001c0001t0175 a0001c0001t0177 a0001c0001t0178 a0001c0001t0179 a0001c0001t0180 a0001c0001t0181 a0001c0001t0182 a0001c0001t0183 a0001c0001t0186 a0001c0001t0187 a0001c0001t0188 a0001c0001t0189 a0001c0001t0190 a0001c0001t0191 a0001c0001t0192 a0001c0001t0193 a0001c0001t0194 a0001c0001t0197 a0001c0001t0198 a0001c0001t0199 a0001c0001t0201	a0001c0001t0006g0004 a0001c0001t0006g0009 a0001c0001t0006g0010 others(116): Show a0001c0001t0006g0004 a0001c0001t0006g0009 a0001c0001t0006g0010 a0001c0001t0006g0011 a0001c0001t0006g0018 a0001c0001t0006g0019 a0001c0001t0008g0006 a0001c0001t0008g0034 a0001c0001t0008g0051 a0001c0001t0008g0059 a0001c0001t0010g0004 a0001c0001t0010g0006 a0001c0001t0010g0007 a0001c0001t0010g0009 a0001c0001t0010g0011 a0001c0001t0010g0135 a0001c0001t0011g0004 a0001c0001t0011g0007 a0001c0001t0011g0009 a0001c0001t0011g0010 a0001c0001t0011g0048 a0001c0001t0012g0004 a0001c0001t0012g0007 a0001c0001t0012g0073 a0001c0001t0012g0110 a0001c0001t0013g0007 a0001c0001t0013g0009 a0001c0001t0013g0010 a0001c0001t0013g0018 a0001c0001t0013g0068 a0001c0001t0013g0096 a0001c0001t0014g0004 a0001c0001t0014g0007 a0001c0001t0014g0010 a0001c0001t0014g0063 a0001c0001t0014g0131 a0001c0001t0017g0063 a0001c0001t0018g0010 a0001c0001t0018g0011 a0001c0001t0018g0018 a0001c0001t0018g0108 a0001c0001t0019g0004 a0001c0001t0019g0007 a0001c0001t0019g0050 a0001c0001t0020g0003 a0001c0001t0023g0006 a0001c0001t0023g0034 a0001c0001t0023g0109 a0001c0001t0024g0004 a0001c0001t0024g0009 a0001c0001t0024g0019 a0001c0001t0025g0015 a0001c0001t0031g0006 a0001c0001t0031g0051 a0001c0001t0031g0064 a0001c0001t0032g0018 a0001c0001t0032g0074 a0001c0001t0032g0076 a0001c0001t0033g0024 a0001c0001t0034g0024 a0001c0001t0034g0038 a0001c0001t0034g0039 a0001c0001t0063g0058 a0001c0001t0064g0004 a0001c0001t0064g0010 a0001c0001t0065g0018 a0001c0001t0065g0047 a0001c0001t0066g0007 a0001c0001t0066g0019 a0001c0001t0067g0019 a0001c0001t0067g0119 a0001c0001t0068g0004 a0001c0001t0068g0115 a0001c0001t0149g0004 a0001c0001t0150g0120 a0001c0001t0151g0034 a0001c0001t0152g0006 a0001c0001t0153g0006 a0001c0001t0154g0006 a0001c0001t0155g0004 a0001c0001t0156g0037 a0001c0001t0157g0006 a0001c0001t0158g0006 a0001c0001t0160g0037 a0001c0001t0161g0126 a0001c0001t0162g0004 a0001c0001t0163g0009 a0001c0001t0164g0011 a0001c0001t0165g0011 a0001c0001t0166g0004 a0001c0001t0167g0019 a0001c0001t0168g0004 a0001c0001t0169g0007 a0001c0001t0170g0009 a0001c0001t0171g0018 a0001c0001t0172g0010 a0001c0001t0173g0047 a0001c0001t0174g0018 a0001c0001t0175g0067 a0001c0001t0177g0004 a0001c0001t0178g0064 a0001c0001t0179g0009 a0001c0001t0180g0019 a0001c0001t0181g0024 a0001c0001t0182g0011 a0001c0001t0183g0038 a0001c0001t0186g0039 a0001c0001t0187g0024 a0001c0001t0188g0038 a0001c0001t0189g0010 a0001c0001t0190g0068 a0001c0001t0191g0006 a0001c0001t0192g0130 a0001c0001t0193g0007 a0001c0001t0194g0095 a0001c0001t0197g0097 a0001c0001t0198g0098 a0001c0001t0199g0072 a0001c0001t0201g0067	142	454	0.3128	-24	c.-26 others(35): Show c.-2662_-2639delAAAGAAAGAAAGAAAGAAGGAAAG	SSTR2	ENSG00000180616.9	transcript	ENST00000357585.4	protein_coding		2291		chr17	TogoVar
SSU72L2_chr11_4236641_4247706	4237134	CTCCCTCT others(17): Show CTCCCTCTCCCTCTCCCTCTCCCTA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG01167.hp2 HG01169.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	2	366	0.0055	-24	c.48 others(35): Show c.4898_*4921delTAGGGAGAGGGAGAGGGAGAGGGA	SSU72L2	ENSG00000284306.2	transcript	ENST00000640805.2	protein_coding		4506		chr11	TogoVar
SSU72L5_chr11_4228217_4239287	4237134	CTCCCTCT others(17): Show CTCCCTCTCCCTCTCCCTCTCCCTA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG01167.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	2	354	0.0057	-24	c.32 others(35): Show c.3263_*3286delTCCCTCTCCCTCTCCCTCTCCCTA	SSU72L5	ENSG00000284018.2	transcript	ENST00000639584.2	protein_coding		2848		chr11	TogoVar
SSX4_chrX_48378539_48398347	48381133	TTTCTTTC others(17): Show TTTCTTTCTTTCTTTCTTTCTTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp1 NA20300.hp2 NA18906.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	2	104	0.0192	-24	c.-24 others(35): Show c.-2451_-2428delTTCTTTCTTTCTTTCTTTCTTTCC	SSX4	ENSG00000268009.6	transcript	ENST00000595689.3	protein_coding		2405		chrX	TogoVar
SSX5_chrX_48181220_48201795	48186387	TGTGTGTG others(17): Show TGTGTGTGTGTGTGTGTGCGCGCGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0042 a0004c0008t0042	a0004c0008t0042g0033 a0004c0008t0042g0033	1	326	0.0031	-24	c.45 others(33): Show c.450_*473delGCGCGCGCACACACACACACACAC	SSX5	ENSG00000165583.16	transcript	ENST00000347757.6	protein_coding	8/8	1220		chrX	TogoVar
SSX5_chrX_48181220_48201795	48198559	GGAAAGAA others(17): Show GGAAAGAAAGAAAGAAAGAAAGAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19079.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0077 a0001c0001t0003g0077	1	326	0.0031	-24	c.-18 others(35): Show c.-1873_-1850delTTTCTTTCTTTCTTTCTTTCTTTC	SSX5	ENSG00000165583.16	transcript	ENST00000347757.6	protein_coding		1765		chrX	TogoVar
ST13_chr22_40819535_40861639	40821804	ATATATAT others(17): Show ATATATATATATACACACATATACG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	344	0.0029	-24	c.47 others(35): Show c.4710_*4733delCGTATATGTGTGTATATATATATA	ST13	ENSG00000100380.15	transcript	ENST00000216218.8	protein_coding		2730		chr22	TogoVar
ST3GAL1_chr8_133449848_133576887	133551541	GGAAAGAA others(17): Show GGAAAGAAAGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0219 a0001c0001t0001g0219	1	332	0.0030	-24	c.-58 others(43): Show c.-581-5639_-581-5616delTTTCTTTCTTTCTTTCTTTCTTTC	ST3GAL1	ENSG00000008513.17	transcript	ENST00000522652.6	protein_coding	1/9			chr8	TogoVar
ST3GAL1_chr8_133449848_133576887	133576569	AAAACAAA others(17): Show AAAACAAAAAACAAAAAAAAAAAAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00639.hp1 HG00733.hp1 others(22): Show HG00438.hp2 HG00639.hp1 HG00733.hp1 HG00738.hp2 HG01070.hp1 HG01167.hp1 HG01168.hp1 HG01255.hp2 HG01515.hp2 HG01517.hp1 HG01952.hp1 HG02027.hp1 HG02129.hp2 HG02258.hp2 HG02273.hp2 HG02683.hp1 NA18939.hp1 NA18944.hp1 NA18962.hp1 NA19009.hp1 NA19010.hp1 NA19074.hp1 NA19077.hp2 NA19082.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0010 a0001c0016	a0001c0001t0001 a0001c0001t0040 a0001c0002t0002 others(6): Show a0001c0001t0001 a0001c0001t0040 a0001c0002t0002 a0001c0003t0004 a0001c0003t0063 a0001c0003t0064 a0001c0004t0003 a0001c0010t0049 a0001c0016t0055	a0001c0001t0001g0031 a0001c0001t0001g0039 a0001c0001t0001g0043 others(22): Show a0001c0001t0001g0031 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0148 a0001c0001t0001g0200 a0001c0001t0001g0203 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0290 a0001c0001t0040g0109 a0001c0002t0002g0027 a0001c0002t0002g0038 a0001c0002t0002g0099 a0001c0002t0002g0189 a0001c0002t0002g0223 a0001c0002t0002g0259 a0001c0002t0002g0265 a0001c0002t0002g0271 a0001c0003t0004g0033 a0001c0003t0004g0036 a0001c0003t0063g0037 a0001c0003t0064g0041 a0001c0004t0003g0042 a0001c0010t0049g0106 a0001c0016t0055g0164	25	332	0.0753	-24	c.-54 others(35): Show c.-5482_-5459delGTTTTTTTTTTTTGTTTTTTGTTT	ST3GAL1	ENSG00000008513.17	transcript	ENST00000522652.6	protein_coding		4683		chr8	TogoVar
ST3GAL3_chr1_43702536_43936159	43723293	GAGACGGG others(17): Show GAGACGGGATTTCACCATGTTGGCC	G G	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02970.hp2 HG02145.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0069 a0001c0001t0001g0070	2	274	0.0073	-24	c.-30 others(43): Show c.-30-12935_-30-12912delGGGATTTCACCATGTTGGCCAGAC	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43765792	CGCGCGCG others(17): Show CGCGCGCGCGTCCGCGCGTCCGCGT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0075 a0001c0001t0002g0075	1	274	0.0037	-24	c.119 others(43): Show c.119-26305_119-26282delGCGCGTCCGCGCGTCCGCGTGCGC	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43857582	CCCTCCCT others(17): Show CCCTCCCTTCCTTCCTTCCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	274	0.0037	-24	c.302 others(43): Show c.302+19275_302+19298delCCCTTCCTTCCTTCCTTCCTTCCT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43875897	CTCTTCTT others(17): Show CTCTTCTTCTTCTTCTTCTTCTTCT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp2 HG00438.hp1 others(17): Show HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00642.hp1 HG00642.hp2 HG01175.hp2 HG01243.hp2 HG02074.hp2 HG02109.hp1 HG02280.hp2 HG02738.hp2 HG03041.hp2 HG03540.hp2 HG03704.hp1 NA18954.hp1 NA18970.hp2 NA18980.hp1 NA19009.hp1 NA19011.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0009 a0001c0001t0002g0017 a0001c0001t0002g0018 others(17): Show a0001c0001t0002g0009 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0022 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0057 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0081 a0001c0001t0002g0092 a0001c0001t0002g0099 a0001c0001t0002g0105 a0001c0001t0002g0126 a0001c0001t0002g0129 a0001c0001t0002g0132 a0001c0001t0002g0165 a0001c0001t0004g0041	20	274	0.0730	-24	c.303 others(43): Show c.303-18454_303-18431delCTTCTTCTTCTTCTTCTTCTTCTT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43875929	CTTCTTCT others(17): Show CTTCTTCTTCTTCTTCTTCTTCTTA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00544.hp1 HG01167.hp1 others(16): Show HG00099.hp1 HG00544.hp1 HG01167.hp1 HG01169.hp2 HG01358.hp2 HG01361.hp1 HG01516.hp1 HG02015.hp2 HG02080.hp1 HG02895.hp1 HG03017.hp2 HG04115.hp2 HG04199.hp1 NA18612.hp1 NA18966.hp1 NA19007.hp2 NA19012.hp2 NA19064.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0016 others(16): Show a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0016 a0001c0001t0002g0053 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0084 a0001c0001t0002g0086 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0107 a0001c0001t0002g0119 a0001c0001t0002g0122 a0001c0001t0002g0127 a0001c0001t0002g0133	19	274	0.0693	-24	c.303 others(43): Show c.303-18451_303-18428delCTTCTTCTTCTTCTTCTTCTTATT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43875932	CTTCTTCT others(17): Show CTTCTTCTTCTTCTTCTTCTTATTA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00558.hp1 HG00741.hp2 others(18): Show HG00323.hp1 HG00558.hp1 HG00741.hp2 HG01070.hp1 HG02083.hp1 HG02132.hp1 HG02145.hp1 HG02602.hp1 HG02735.hp2 HG03041.hp1 NA18949.hp2 NA18971.hp2 NA18979.hp2 NA18981.hp2 NA18986.hp1 NA18999.hp1 NA19002.hp2 NA19010.hp1 NA19062.hp1 NA19074.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0070 a0001c0001t0002g0003 a0001c0001t0002g0021 others(18): Show a0001c0001t0001g0070 a0001c0001t0002g0003 a0001c0001t0002g0021 a0001c0001t0002g0051 a0001c0001t0002g0059 a0001c0001t0002g0080 a0001c0001t0002g0087 a0001c0001t0002g0089 a0001c0001t0002g0098 a0001c0001t0002g0101 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0108 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0118 a0001c0001t0002g0121 a0001c0001t0002g0164 a0001c0001t0002g0166	21	274	0.0766	-24	c.303 others(43): Show c.303-18448_303-18425delCTTCTTCTTCTTCTTCTTATTATT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43875935	CTTCTTCT others(17): Show CTTCTTCTTCTTCTTCTTATTATTA	C C	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00673.hp2 HG01169.hp1 others(6): Show HG00597.hp2 HG00673.hp2 HG01169.hp1 HG01256.hp2 HG02109.hp2 HG02523.hp1 HG03710.hp2 NA18994.hp1 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0032 others(6): Show a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0032 a0001c0001t0002g0055 a0001c0001t0002g0067 a0001c0001t0002g0085 a0001c0001t0002g0106 a0001c0001t0002g0109 a0001c0001t0002g0128	9	274	0.0329	-24	c.303 others(43): Show c.303-18445_303-18422delCTTCTTCTTCTTCTTATTATTATT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43875938	CTTCTTCT others(17): Show CTTCTTCTTCTTCTTATTATTATTA	C C	intron_variant intron_variant	MODIFIER	HG03471.hp2 NA19000.hp1 NA19082.hp1 others(2): Show HG03471.hp2 NA19000.hp1 NA19082.hp1 NA19083.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0197 a0001c0001t0002g0011 a0001c0001t0002g0031 others(2): Show a0001c0001t0001g0197 a0001c0001t0002g0011 a0001c0001t0002g0031 a0001c0001t0002g0048 a0001c0001t0002g0123	5	274	0.0183	-24	c.303 others(43): Show c.303-18442_303-18419delCTTCTTCTTCTTATTATTATTATT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43875941	CTTCTTCT others(17): Show CTTCTTCTTCTTATTATTATTATTA	C C	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18989.hp1 NA18964.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0058 a0001c0001t0002g0097 a0001c0001t0002g0058 a0001c0001t0002g0097	2	274	0.0073	-24	c.303 others(43): Show c.303-18439_303-18416delCTTCTTCTTATTATTATTATTATT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST3GAL3_chr1_43702536_43936159	43875944	CTTCTTCT others(17): Show CTTCTTCTTATTATTATTATTATTA	C C	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18947.hp2 NA18941.hp1 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0096 a0001c0001t0002g0102 a0001c0001t0002g0096 a0001c0001t0002g0102	2	274	0.0073	-24	c.303 others(43): Show c.303-18436_303-18413delCTTCTTATTATTATTATTATTATT	ST3GAL3	ENSG00000126091.21	transcript	ENST00000347631.8	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST6GAL1_chr3_186925526_187083553	186926202	CATATATA others(17): Show CATATATATATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG02258.hp2 HG02809.hp1 others(6): Show HG01109.hp1 HG02258.hp2 HG02809.hp1 HG02818.hp1 HG03130.hp1 HG03139.hp1 HG03486.hp2 HG03579.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0011	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0018 a0001c0002t0008 a0001c0005t0026 a0001c0006t0047 a0001c0011t0050	a0001c0001t0001g0139 a0001c0001t0003g0024 a0001c0001t0003g0157 others(6): Show a0001c0001t0001g0139 a0001c0001t0003g0024 a0001c0001t0003g0157 a0001c0001t0004g0057 a0001c0001t0018g0138 a0001c0002t0008g0140 a0001c0005t0026g0070 a0001c0006t0047g0031 a0001c0011t0050g0155	9	362	0.0249	-24	c.-49 others(35): Show c.-4956_-4933delATATATATATATATATATATATAT	ST6GAL1	ENSG00000073849.16	transcript	ENST00000169298.8	protein_coding		4323		chr3	TogoVar
ST6GAL1_chr3_186925526_187083553	186984740	TTCCCTCC others(17): Show TTCCCTCCCTCCCTCCCTCCCTCCC	T T	intron_variant intron_variant	MODIFIER	HG02683.hp2 NA18747.hp1 NA18966.hp1 others(2): Show HG02683.hp2 NA18747.hp1 NA18966.hp1 NA19082.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 others(2): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 a0001c0001t0011 a0001c0001t0036	a0001c0001t0003g0263 a0001c0001t0006g0287 a0001c0001t0009g0294 others(2): Show a0001c0001t0003g0263 a0001c0001t0006g0287 a0001c0001t0009g0294 a0001c0001t0011g0231 a0001c0001t0036g0266	5	362	0.0138	-24	c.-18 others(45): Show c.-183+20818_-183+20841delCTCCCTCCCTCCCTCCCTCCCTCC	ST6GAL1	ENSG00000073849.16	transcript	ENST00000169298.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
ST6GALNAC1_chr17_76619763_76648757	76639638	AACACACA others(17): Show AACACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02486.hp2 HG02280.hp2 HG02486.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0002 a0003c0002t0003 a0001c0001t0002 a0003c0002t0003	a0001c0001t0002g0224 a0003c0002t0003g0059 a0001c0001t0002g0224 a0003c0002t0003g0059	2	412	0.0049	-24	c.131 others(41): Show c.131+3846_131+3869delGTGTGTGTGTGTGTGTGTGTGTGT	ST6GALNAC1	ENSG00000070526.15	transcript	ENST00000156626.12	protein_coding	1/8			chr17	TogoVar
ST6GALNAC2_chr17_76560377_76590860	76590033	GTTTTTTT others(17): Show GTTTTTTTTTCTTTCTTACTGTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG01069.hp1 HG01070.hp1 others(11): Show HG00597.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG03041.hp2 HG03704.hp2 NA18962.hp1 NA18988.hp2 NA19002.hp1 NA19007.hp2 NA19057.hp2 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0014 a0001c0001t0020	a0001c0001t0001g0002 a0001c0001t0001g0036 a0001c0001t0001g0098 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0036 a0001c0001t0001g0098 a0001c0001t0001g0141 a0001c0001t0002g0021 a0001c0001t0002g0284 a0001c0001t0003g0001 a0001c0001t0006g0015 a0001c0001t0006g0291 a0001c0001t0014g0067 a0001c0001t0020g0180	14	426	0.0329	-24	c.-42 others(35): Show c.-4249_-4226delAAAACAGTAAGAAAGAAAAAAAAA	ST6GALNAC2	ENSG00000070731.11	transcript	ENST00000225276.10	protein_coding		4174		chr17	TogoVar
ST6GALNAC3_chr1_76069746_76639603	76292273	GTAGCTTC others(17): Show GTAGCTTCAGTAGAGTGGGAAATGA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01074.hp2 HG01109.hp1 others(12): Show HG00140.hp1 HG01074.hp2 HG01109.hp1 HG01192.hp2 HG01496.hp1 HG01978.hp1 HG01978.hp2 HG02055.hp2 HG02717.hp1 HG02809.hp2 HG03041.hp1 HG03579.hp1 HG03688.hp1 HG04184.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0025 a0001c0001t0026 a0002c0002t0001 a0002c0002t0007 a0002c0002t0008 a0002c0002t0011	a0001c0001t0002g0081 a0001c0001t0003g0026 a0001c0001t0003g0077 others(12): Show a0001c0001t0002g0081 a0001c0001t0003g0026 a0001c0001t0003g0077 a0001c0001t0004g0030 a0001c0001t0012g0100 a0001c0001t0025g0043 a0001c0001t0026g0029 a0002c0002t0001g0009 a0002c0002t0001g0015 a0002c0002t0001g0031 a0002c0002t0001g0079 a0002c0002t0001g0096 a0002c0002t0007g0060 a0002c0002t0008g0035 a0002c0002t0011g0076	15	102	0.1471	-24	c.19- others(41): Show c.19-21505_19-21482delGCTTCAGTAGAGTGGGAAATGATA	ST6GALNAC3	ENSG00000184005.12	transcript	ENST00000328299.4	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST6GALNAC5_chr1_76862480_77072546	76872096	CACACACA others(17): Show CACACACACACACACACACACACCA	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01255.hp2 HG01358.hp1 others(1): Show HG01106.hp1 HG01255.hp2 HG01358.hp1 NA20805.hp2	a0002 a0002	a0002c0002 a0002c0003 a0002c0002 a0002c0003	a0002c0002t0012 a0002c0003t0014 a0002c0002t0012 a0002c0003t0014	a0002c0002t0012g0196 a0002c0003t0014g0172 a0002c0003t0014g0173 others(1): Show a0002c0002t0012g0196 a0002c0003t0014g0172 a0002c0003t0014g0173 a0002c0003t0014g0174	4	202	0.0198	-24	c.261 others(41): Show c.261+3355_261+3378delACACACACACACACACACACACCA	ST6GALNAC5	ENSG00000117069.15	transcript	ENST00000477717.6	protein_coding	2/4			chr1	TogoVar
ST6GALNAC5_chr1_76862480_77072546	77016258	CTCCTCCT others(17): Show CTCCTCCTGTATCTCCTCCCCCTCA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	202	0.0050	-24	c.262 others(43): Show c.262-27922_262-27899delATCCTCCTGTATCTCCTCCCCCTC	ST6GALNAC5	ENSG00000117069.15	transcript	ENST00000477717.6	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
ST7_chr7_116948501_117235176	116968281	CTCCCTCC others(17): Show CTCCCTCCCTCCCTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01081.hp1 HG01496.hp2 others(14): Show HG00738.hp1 HG01081.hp1 HG01496.hp2 HG01978.hp1 HG02257.hp1 HG02572.hp2 HG02970.hp2 HG02976.hp2 HG03139.hp2 HG03195.hp2 HG04184.hp2 HG04228.hp1 NA19011.hp2 NA19240.hp2 NA20752.hp2 NA20805.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0064 others(14): Show a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0002t0001g0044	17	188	0.0904	-24	c.151 others(43): Show c.151+14594_151+14617delCTCCCTCCCTCCTTCCTTCCTTCC	ST7	ENSG00000004866.22	transcript	ENST00000323984.8	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
ST7_chr7_116948501_117235176	116968285	CTCCCTCC others(17): Show CTCCCTCCCTCCTTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02486.hp1 HG02723.hp2 HG02280.hp1 HG02486.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0188 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0188	3	188	0.0160	-24	c.151 others(43): Show c.151+14598_151+14621delCTCCCTCCTTCCTTCCTTCCTTCC	ST7	ENSG00000004866.22	transcript	ENST00000323984.8	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr7	TogoVar

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